|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
21-845 |
2.52e-51 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 190.84 E-value: 2.52e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntGFTQGADFGNTFTpaaNAISLRGLGPNHTLT 100
Cdd:COG4771 27 LEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP---GVSVTRSGGRGGS---SGISIRGLGGDRVLV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 101 LINGRRVADYPTAydgsvNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEHHGGe 180
Cdd:COG4771 101 LIDGVPVNNPALG-----GGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGNG- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 181 NGRLQLSGGHSWDQLSLVYGLELSQRNAIWSNQRGFMADNssdgsapttiwsqqikqgpnkgkyigagdcsafsslfngs 260
Cdd:COG4771 175 TYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGN---------------------------------------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 261 vrpytinsrtgngvvcasgqaspdywtiqTANQSQNGYLSANYQLNEHAELFsdalLGFNHTENNTRGPAWTslGGSSQY 340
Cdd:COG4771 215 -----------------------------SGYERYNLNAKLGYRLSDNHRLS----LSGGYSRQDRDGGPPT--LGDTEI 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 341 FLNQNTGQYEQWTRRlapeeiggatvynrkwddlsaNLTFGVRGDLpGTSWNYEAAYNASIYTSQQAAPRLLSNVDSFFL 420
Cdd:COG4771 260 SSDNAGDRDTTTDRG---------------------NYSLRYNGDL-GDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSD 317
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 421 GPQLGTDsngigiyapnaahfaapitpAQFNSIVGRSFEqdkswlqalslsgsgdlfklpagavklagaLEWGSQGFSND 500
Cdd:COG4771 318 DTTYGLE--------------------LDLTYPLGGNHT------------------------------LTLGAEYRYDD 347
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 501 pdiqlgqgvFYRASPGSHAGGTRARQAAGAELFIPLHKRLNVTLSGRYDRLAIADSSVGKFTYGS-GLEFRPLDTLLLRG 579
Cdd:COG4771 348 ---------LDSSSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASNYTAFSPRlGLRYDLSDNLTLRA 418
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 580 NYATSFRAPDMNYLFLTQSRGYYPSVTdywrcqqagqptatcdykdltanfvksGNPDLKPENGKSYGFGFVWSPSADA- 658
Cdd:COG4771 419 SYGRGFRAPSLAELYGSGTGTPGRYVL---------------------------GNPDLKPETSDNYELGLEYRLGNGGl 471
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 659 DLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrrvqrnpanAVLDPGAINQILTnPINAANERTSG 738
Cdd:COG4771 472 SLSLTGFYTDIKDLIV---------------------------------------LVPVGPGPGDVLQ-YENVGKARTYG 511
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 739 IDLNgkLRWRTAKWgrFQLQASYsqvlTFTYQQFAGDPTQDRLqdlsNSDWRNKLSASLGWSIGNWSSTLQLTRYGK--- 815
Cdd:COG4771 512 LELE--LKYRLGKG--LTLTASY----TYLDSKIDDGDTGEPL----PNVPPHKANLGLDYRLPKWWLLLLLTRYYGgry 579
|
810 820 830
....*....|....*....|....*....|..
gi 2158346502 816 --VPNNAQTGYLTPTILANLSLGYQLSKQTSL 845
Cdd:COG4771 580 vtPPSGRLEGYTPGYTLLDLRASYKLTKNLTL 611
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
41-887 |
2.99e-49 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 184.96 E-value: 2.99e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 41 SVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLTLINGRRVADyptayDGSVNF 120
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIP-------GVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLAS-----SNYGRG 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 121 VNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGAsehhgGENGRLQlSGGHSWDQLslvyg 200
Cdd:cd01347 69 VDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGY-----GSDNSGS-SGGGGFDVS----- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 201 lelsqrnaiwsnqrgfmadnssdgsapttiwsqqikqgpnkgkyIGAGDCSAFSSLFNGSVRPYTinsrtgngvvcasGQ 280
Cdd:cd01347 138 --------------------------------------------GALADDGAFGARLYGAYRDGD-------------GT 160
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 281 ASPDYWTIQTANQSQNGYLSANYQLNEHAELFSDALLGFNHTENNTRGPAWTSLGGSSQYFLNQNTGqyeqwtrrlapee 360
Cdd:cd01347 161 IDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTN------------- 227
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 361 iGGATVYNRKWDDLSANLTFGVRGDLPGTSWNYEAAYNASIYTSQQAAPRLLSNVDSFFLGpqlgtdsngigiyapnaah 440
Cdd:cd01347 228 -GDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLG------------------- 287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 441 faapitpaqfNSIVGRSFEQDKSWLQAlslsgsgdlfklpagavKLAGALEWGSQGFSndpdIQLGQGVFYRAspgshag 520
Cdd:cd01347 288 ----------RSGYSSERDTTQLGFDA-----------------GLNAPFGTGPVAHT----LTLGVEYRREE------- 329
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 521 gTRARQAAG-AELFIPLHKRLNVTLSGRYDRLAIADSSV-----------GKFTYGSGLEFRPLDTLLLRGNYATSFRAP 588
Cdd:cd01347 330 -LDEKQTALyAQDTIELTDDLTLTLGLRYDHYDQDSKDTiaggttakksySHWSPSLGLVYKLTDGLSLYASYSQGFRAP 408
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 589 DMNYLFLTQSRGYYPSVtdywrcqqagqptatcdykdltanfvksGNPDLKPENGKSYGFGFVWSPSADADLSLDYWNIS 668
Cdd:cd01347 409 SLGELYGGGSHGGTAAV----------------------------GNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRID 460
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 669 INDLVTDLDQdkilrdeaacrsgqldsnsslcqdalrrvqrnpanavldpGAINQILTNPINAANERTSGIDLNGKLRWr 748
Cdd:cd01347 461 IKNEIVSTPT----------------------------------------NTGLGLVTVYVNGGKARIRGVELEASYDL- 499
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 749 takWGRFQLQASYSQVLTFTYQQfAGDPTQDRLQDLSnsdwRNKLSASLGWSIGN--WSSTLQLTRYGKVPNNAQTGYLT 826
Cdd:cd01347 500 ---TDGLGLTGSYTYTDTEVKRT-DGATTGNRLPGIP----KHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGNNT 571
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2158346502 827 PTI----LANLSLGYQLSKQTSLGLIVNNLQDfikKDYSDGAPYYPVGTYLPY--GRQAWLELNHHF 887
Cdd:cd01347 572 VKVpgytLVDLSASYQFTKNLTLRLGVNNLFD---KDYYTSLSVRGSGLYGYYgpGRTYYLSVSYKF 635
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
21-854 |
1.38e-30 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 128.66 E-value: 1.38e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLT 100
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVP-------GVDVTGGGRPPGQSINIRGLQDNRVLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 101 LINGRRVadyPTAYDGSVNfvNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGasehhgge 180
Cdd:TIGR01785 74 VVDGARQ---NYQRGGAHN--GSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFG-------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 181 nGRLQLSgghswdqlslvYGLelsqrnaiwsnqrgfmADNSSDGSApttiwsqqikqgpnkgkyIGAGDCSAFSSLFNGS 260
Cdd:TIGR01785 141 -GLAKLS-----------YGS----------------NNNSFGGSV------------------AVAGRLDDNLDALVAA 174
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 261 VRPYTINSRTGNGvvcasgqaspdYWTIQTANQSQNGYLSANYQLNehaelfSDALLGFNHTENNTRGPAWTSLGGSSQY 340
Cdd:TIGR01785 175 TYRDGGNYRNGNK-----------EEATNSAYVQKNLLAKLGWQLD------DAQRLEFSYFTTEGSLDEAQNSGPGTEY 237
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 341 FLNQNTgqyeqwtrrlapeeiggaTVYNRKWDDLSANLTFGVrgDLPGTSW--NYEAAYNASIYTSQQAAPRLLSNVDsf 418
Cdd:TIGR01785 238 VLGSSS------------------TLLASSTRDRSATLTYNW--TPEDNPWldATASLYYNRTENDNDRSARGVGREE-- 295
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 419 flgpqlGTDSNGIGIYAPNAahfaapitpaqfnsivgRSFEQDKswlqALSLSGSGDLFKLPAgavklagalewgsQGFS 498
Cdd:TIGR01785 296 ------GYQYTTYGATLQNT-----------------SRFDVAS----WSTLTYGVDWMKDKR-------------RTES 335
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 499 NDPDIqLGQGVFYraspgsHAGGTRARQAAGAELFIPLH-KRLNVTLSGRYDRL-----AIADSSVGKFTYGS-----GL 567
Cdd:TIGR01785 336 FDPNS-VTTIVPN------PPSAKEYFFGLFLQDNIPLLdDRLTLSAGLRYDHYklspkTTADTEAVDRSYSRwspslGL 408
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 568 EFRPLDTLLLRGNYATSFRAPDMNYLFLTQSRgyypsvtdywrcqqAGQPTATCDYkdltanfvksGNPDLKPENGKSYG 647
Cdd:TIGR01785 409 SYKPVDWLTLYASYSQGFRAPSIDELYGTGDH--------------PGTPGGYTFA----------PNPNLKPETSKTWE 464
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 648 FGFvwspsadadlsldywNISINDLVTDLDqdkilrdeaacrsgQLDSNSSL----CQDALRRVQRNPANAvldPGAINQ 723
Cdd:TIGR01785 465 LGA---------------NLSFDNLLLDND--------------QLQFKVAYfyndVKDFIDLTIGVTDNV---TAGMNN 512
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 724 IlTNPINAANERTSGIDLNGKLrwrtaKWGRFQLQASYSQVLTftyqqfagdPTQDRLQDLSNsdwRNKLSASLGWSIG- 802
Cdd:TIGR01785 513 I-TQYVNIDGARIRGIEASASY-----DAGLWATGLSYGYTIG---------KDQNTNQWLSN---IPPLKLVVTVGYRf 574
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2158346502 803 ---NWSSTLQLTRYGKVPNNAQT-----GYLTPT---ILANLSLGYQLS--KQTSLGLIVNNLQD 854
Cdd:TIGR01785 575 pdrRLDLGAKAAYYERQSESPTTedvaaNGLLTTpgyTVVDLYATYQPNavKGLTVRFGVNNLTD 639
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
34-153 |
4.38e-28 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 108.90 E-value: 4.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 34 SAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLTLINGRRVadypta 113
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVP-------GVSVSSGGGGGGSSISIRGFGSNRVLVLVDGVPL------ 67
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2158346502 114 YDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGV 153
Cdd:pfam07715 68 NSGGGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
21-200 |
1.21e-22 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 103.70 E-value: 1.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqgadfGNTFTPAANA--ISLRGLGPNHT 98
Cdd:PRK13483 33 METVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVP-----------GVVVTGGGDRtdISLRGMGSQYT 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 99 LTLINGRRVADYPTAYDGSVNFVNLANIPA-AMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEHH 177
Cdd:PRK13483 102 LILVDGKRQSSRETRPNSDGPGVEQAWTPPlAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQE 181
|
170 180
....*....|....*....|....*....
gi 2158346502 178 GGENGRLQ-----LSGGHSWDQLSL-VYG 200
Cdd:PRK13483 182 NSDSGNVYqanffVNGPLIKDLLGLqLYG 210
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
21-845 |
2.52e-51 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 190.84 E-value: 2.52e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntGFTQGADFGNTFTpaaNAISLRGLGPNHTLT 100
Cdd:COG4771 27 LEEVVVTATRTEQSLSDAPASVSVITAEEIEKLGATDLADALRLLP---GVSVTRSGGRGGS---SGISIRGLGGDRVLV 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 101 LINGRRVADYPTAydgsvNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEHHGGe 180
Cdd:COG4771 101 LIDGVPVNNPALG-----GGGDLSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKPTDELEGSVSLGYGSNGNG- 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 181 NGRLQLSGGHSWDQLSLVYGLELSQRNAIWSNQRGFMADNssdgsapttiwsqqikqgpnkgkyigagdcsafsslfngs 260
Cdd:COG4771 175 TYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGN---------------------------------------- 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 261 vrpytinsrtgngvvcasgqaspdywtiqTANQSQNGYLSANYQLNEHAELFsdalLGFNHTENNTRGPAWTslGGSSQY 340
Cdd:COG4771 215 -----------------------------SGYERYNLNAKLGYRLSDNHRLS----LSGGYSRQDRDGGPPT--LGDTEI 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 341 FLNQNTGQYEQWTRRlapeeiggatvynrkwddlsaNLTFGVRGDLpGTSWNYEAAYNASIYTSQQAAPRLLSNVDSFFL 420
Cdd:COG4771 260 SSDNAGDRDTTTDRG---------------------NYSLRYNGDL-GDNLDLSLYYSRTDRDSTNGSLGGSTGSFSDSD 317
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 421 GPQLGTDsngigiyapnaahfaapitpAQFNSIVGRSFEqdkswlqalslsgsgdlfklpagavklagaLEWGSQGFSND 500
Cdd:COG4771 318 DTTYGLE--------------------LDLTYPLGGNHT------------------------------LTLGAEYRYDD 347
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 501 pdiqlgqgvFYRASPGSHAGGTRARQAAGAELFIPLHKRLNVTLSGRYDRLAIADSSVGKFTYGS-GLEFRPLDTLLLRG 579
Cdd:COG4771 348 ---------LDSSSFLGGADASRDTYGLFAQDEWKLTDKLTLTAGLRYDYYSTFGASNYTAFSPRlGLRYDLSDNLTLRA 418
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 580 NYATSFRAPDMNYLFLTQSRGYYPSVTdywrcqqagqptatcdykdltanfvksGNPDLKPENGKSYGFGFVWSPSADA- 658
Cdd:COG4771 419 SYGRGFRAPSLAELYGSGTGTPGRYVL---------------------------GNPDLKPETSDNYELGLEYRLGNGGl 471
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 659 DLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrrvqrnpanAVLDPGAINQILTnPINAANERTSG 738
Cdd:COG4771 472 SLSLTGFYTDIKDLIV---------------------------------------LVPVGPGPGDVLQ-YENVGKARTYG 511
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 739 IDLNgkLRWRTAKWgrFQLQASYsqvlTFTYQQFAGDPTQDRLqdlsNSDWRNKLSASLGWSIGNWSSTLQLTRYGK--- 815
Cdd:COG4771 512 LELE--LKYRLGKG--LTLTASY----TYLDSKIDDGDTGEPL----PNVPPHKANLGLDYRLPKWWLLLLLTRYYGgry 579
|
810 820 830
....*....|....*....|....*....|..
gi 2158346502 816 --VPNNAQTGYLTPTILANLSLGYQLSKQTSL 845
Cdd:COG4771 580 vtPPSGRLEGYTPGYTLLDLRASYKLTKNLTL 611
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
41-887 |
2.99e-49 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 184.96 E-value: 2.99e-49
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 41 SVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLTLINGRRVADyptayDGSVNF 120
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIP-------GVSVTRGGGGGGSTISIRGFGPDRTLVLVDGLPLAS-----SNYGRG 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 121 VNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGAsehhgGENGRLQlSGGHSWDQLslvyg 200
Cdd:cd01347 69 VDLNTIPPELIERVEVLKGPSSALYGSGAIGGVVNIITKRPTDEFGGSVTAGY-----GSDNSGS-SGGGGFDVS----- 137
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 201 lelsqrnaiwsnqrgfmadnssdgsapttiwsqqikqgpnkgkyIGAGDCSAFSSLFNGSVRPYTinsrtgngvvcasGQ 280
Cdd:cd01347 138 --------------------------------------------GALADDGAFGARLYGAYRDGD-------------GT 160
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 281 ASPDYWTIQTANQSQNGYLSANYQLNEHAELFSDALLGFNHTENNTRGPAWTSLGGSSQYFLNQNTGqyeqwtrrlapee 360
Cdd:cd01347 161 IDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTN------------- 227
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 361 iGGATVYNRKWDDLSANLTFGVRGDLPGTSWNYEAAYNASIYTSQQAAPRLLSNVDSFFLGpqlgtdsngigiyapnaah 440
Cdd:cd01347 228 -GDRDWDYRDRYRKRASLGLEHDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLG------------------- 287
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 441 faapitpaqfNSIVGRSFEQDKSWLQAlslsgsgdlfklpagavKLAGALEWGSQGFSndpdIQLGQGVFYRAspgshag 520
Cdd:cd01347 288 ----------RSGYSSERDTTQLGFDA-----------------GLNAPFGTGPVAHT----LTLGVEYRREE------- 329
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 521 gTRARQAAG-AELFIPLHKRLNVTLSGRYDRLAIADSSV-----------GKFTYGSGLEFRPLDTLLLRGNYATSFRAP 588
Cdd:cd01347 330 -LDEKQTALyAQDTIELTDDLTLTLGLRYDHYDQDSKDTiaggttakksySHWSPSLGLVYKLTDGLSLYASYSQGFRAP 408
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 589 DMNYLFLTQSRGYYPSVtdywrcqqagqptatcdykdltanfvksGNPDLKPENGKSYGFGFVWSPSADADLSLDYWNIS 668
Cdd:cd01347 409 SLGELYGGGSHGGTAAV----------------------------GNPNLKPEKSKQYELGLKYDPGDGLTLSAALFRID 460
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 669 INDLVTDLDQdkilrdeaacrsgqldsnsslcqdalrrvqrnpanavldpGAINQILTNPINAANERTSGIDLNGKLRWr 748
Cdd:cd01347 461 IKNEIVSTPT----------------------------------------NTGLGLVTVYVNGGKARIRGVELEASYDL- 499
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 749 takWGRFQLQASYSQVLTFTYQQfAGDPTQDRLQDLSnsdwRNKLSASLGWSIGN--WSSTLQLTRYGKVPNNAQTGYLT 826
Cdd:cd01347 500 ---TDGLGLTGSYTYTDTEVKRT-DGATTGNRLPGIP----KHTANLGLDYELPDegLTAGGGVRYRGKQYADTANGNNT 571
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2158346502 827 PTI----LANLSLGYQLSKQTSLGLIVNNLQDfikKDYSDGAPYYPVGTYLPY--GRQAWLELNHHF 887
Cdd:cd01347 572 VKVpgytLVDLSASYQFTKNLTLRLGVNNLFD---KDYYTSLSVRGSGLYGYYgpGRTYYLSVSYKF 635
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
24-208 |
7.63e-36 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 137.31 E-value: 7.63e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 24 VTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANA-ISLRGLGPNHTLTLI 102
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERSGATSLADALRRVP-------GVQVSSSGGPGSAAsISIRGLGSNQTLVLI 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 103 NGRRVadyptaYDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGasehhGGENG 182
Cdd:COG4206 74 DGVPL------NDPSLGGVDLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKGKKGFKGSVSAS-----YGSFG 142
|
170 180
....*....|....*....|....*.
gi 2158346502 183 RLQLSGGHSWDQLSLVYGLELSQRNA 208
Cdd:COG4206 143 TRRLSASLSGGAGKFSYSLSASYRRS 168
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
21-872 |
1.68e-35 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 143.81 E-value: 1.68e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntGFTQgadfgNTFTPAANAISLRGLGPNHT-- 98
Cdd:COG1629 1 LEEVVVTATRTDESLQDVPGSVSVISREQLEDQPATDLGDLLRRVP---GVSV-----TSAGGGAGQISIRGFGGGGNrv 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 99 LTLINGRRVadyptaYDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEhHG 178
Cdd:COG1629 73 LVLVDGVPL------NDPSGGDGGLSYIDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKDGKGGEVSASYGS-YG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 179 GENGRLQLSGGHswDQLSLVYGLELSQRnaiwsnqrgfmadnssdgsapttiwsqqikqgpnkgkyigagdcsafsslfn 258
Cdd:COG1629 146 TYRASLSLSGGN--GKLAYRLSASYRDS---------------------------------------------------- 171
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 259 gsvrpytinsrtgngvvcasgqaspDYWTIQTANQSQNGYLSANYQLNEHAELfsDALLGFNHTENNTRGPAWTSLGGSS 338
Cdd:COG1629 172 -------------------------DGYRDNSDSDRYNLRAKLGYQLGDDTRL--TLSASYSDSDQDSPGYLTLAALRPR 224
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 339 QYFLNqNTGQYEQWTRRLAPEEIGGATVYNRKWDDLSANLTFGVRGDLPGTSWNYEAAYNASIYTSQQAaprllsnvdsf 418
Cdd:COG1629 225 GAMDD-GTNPYSNDTDDNTRDRYSLSLEYEHLGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTD----------- 292
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 419 flgpqlgTDSNGIGIYApnaahfaapitpaqfnsivgrSFEQDKSWLQALSLSGSGDLFKlpagavklagalewgSQGFS 498
Cdd:COG1629 293 -------FDNRTYGLEL---------------------RLTYDLGFGGKHTLLVGLDYQR---------------QDLDG 329
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 499 NDPDIQLGQGVFYRASPGSHAGGTRARQAAGAELFIPLHKRLNVTLSGRYDR--------LAIADSSVGKFTYGS----- 565
Cdd:COG1629 330 SGYPLDLGSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYDYvsydvddtVTGTDSASGSRSYSAfspsl 409
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 566 GLEFRPLDTLLLRGNYATSFRAPDMNYLFLTQSRGYypsvtdywrcqqagqptatcdykdltanfvKSGNPDLKPENGKS 645
Cdd:COG1629 410 GLTYQLSPNLSLYASYSRGFRAPTFGELYANGTDPY------------------------------SVGNPDLKPETSTN 459
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 646 YGFGFVWSPSADA-DLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrrVQRNPANavldpgaiNQI 724
Cdd:COG1629 460 YELGLRYRLLDGRlSLSLALFYSDVDNEIL--------------------------------SVPLPND--------SGF 499
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 725 LTNPINAANERTSGIDLNgkLRWRTAKWGRFQLQASYSQvltFTYQQFAGDPTQDRLQDLSNSDwRNKLSASLGWSI-GN 803
Cdd:COG1629 500 STYYTNAGKARSYGVELE--LSYQLTPGLSLNASYSYTD---AKFDDDTDGSADLDGNRLPGVP-PLTANLGLTYEFpGG 573
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2158346502 804 WSSTLQLTRYGKVPNNAQTGYLTPTI--LANLSLGYQLSKQTSLGLIVNNLQDfikKDYSDGAPYYPVGTY 872
Cdd:COG1629 574 WSLGLGVRYVGDRYLDDANTQGAPGGytLVDLGAGYRFGDNLTLSLGVDNLFD---KKYATSLSVRASNVR 641
|
|
| TonB-hemin |
TIGR01785 |
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ... |
21-854 |
1.38e-30 |
|
TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273807 [Multi-domain] Cd Length: 665 Bit Score: 128.66 E-value: 1.38e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLT 100
Cdd:TIGR01785 1 LDTVTVTATRTRQVLSEAPASVSVISGEQIESKQANNLADALNTVP-------GVDVTGGGRPPGQSINIRGLQDNRVLV 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 101 LINGRRVadyPTAYDGSVNfvNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGasehhgge 180
Cdd:TIGR01785 74 VVDGARQ---NYQRGGAHN--GSLFVDPELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAADLLRPGQLFG-------- 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 181 nGRLQLSgghswdqlslvYGLelsqrnaiwsnqrgfmADNSSDGSApttiwsqqikqgpnkgkyIGAGDCSAFSSLFNGS 260
Cdd:TIGR01785 141 -GLAKLS-----------YGS----------------NNNSFGGSV------------------AVAGRLDDNLDALVAA 174
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 261 VRPYTINSRTGNGvvcasgqaspdYWTIQTANQSQNGYLSANYQLNehaelfSDALLGFNHTENNTRGPAWTSLGGSSQY 340
Cdd:TIGR01785 175 TYRDGGNYRNGNK-----------EEATNSAYVQKNLLAKLGWQLD------DAQRLEFSYFTTEGSLDEAQNSGPGTEY 237
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 341 FLNQNTgqyeqwtrrlapeeiggaTVYNRKWDDLSANLTFGVrgDLPGTSW--NYEAAYNASIYTSQQAAPRLLSNVDsf 418
Cdd:TIGR01785 238 VLGSSS------------------TLLASSTRDRSATLTYNW--TPEDNPWldATASLYYNRTENDNDRSARGVGREE-- 295
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 419 flgpqlGTDSNGIGIYAPNAahfaapitpaqfnsivgRSFEQDKswlqALSLSGSGDLFKLPAgavklagalewgsQGFS 498
Cdd:TIGR01785 296 ------GYQYTTYGATLQNT-----------------SRFDVAS----WSTLTYGVDWMKDKR-------------RTES 335
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 499 NDPDIqLGQGVFYraspgsHAGGTRARQAAGAELFIPLH-KRLNVTLSGRYDRL-----AIADSSVGKFTYGS-----GL 567
Cdd:TIGR01785 336 FDPNS-VTTIVPN------PPSAKEYFFGLFLQDNIPLLdDRLTLSAGLRYDHYklspkTTADTEAVDRSYSRwspslGL 408
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 568 EFRPLDTLLLRGNYATSFRAPDMNYLFLTQSRgyypsvtdywrcqqAGQPTATCDYkdltanfvksGNPDLKPENGKSYG 647
Cdd:TIGR01785 409 SYKPVDWLTLYASYSQGFRAPSIDELYGTGDH--------------PGTPGGYTFA----------PNPNLKPETSKTWE 464
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 648 FGFvwspsadadlsldywNISINDLVTDLDqdkilrdeaacrsgQLDSNSSL----CQDALRRVQRNPANAvldPGAINQ 723
Cdd:TIGR01785 465 LGA---------------NLSFDNLLLDND--------------QLQFKVAYfyndVKDFIDLTIGVTDNV---TAGMNN 512
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 724 IlTNPINAANERTSGIDLNGKLrwrtaKWGRFQLQASYSQVLTftyqqfagdPTQDRLQDLSNsdwRNKLSASLGWSIG- 802
Cdd:TIGR01785 513 I-TQYVNIDGARIRGIEASASY-----DAGLWATGLSYGYTIG---------KDQNTNQWLSN---IPPLKLVVTVGYRf 574
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2158346502 803 ---NWSSTLQLTRYGKVPNNAQT-----GYLTPT---ILANLSLGYQLS--KQTSLGLIVNNLQD 854
Cdd:TIGR01785 575 pdrRLDLGAKAAYYERQSESPTTedvaaNGLLTTpgyTVVDLYATYQPNavKGLTVRFGVNNLTD 639
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
34-153 |
4.38e-28 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 108.90 E-value: 4.38e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 34 SAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTLTLINGRRVadypta 113
Cdd:pfam07715 1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVP-------GVSVSSGGGGGGSSISIRGFGSNRVLVLVDGVPL------ 67
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2158346502 114 YDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGV 153
Cdd:pfam07715 68 NSGGGGSVDLNSIDPEDIERVEVLKGPASALYGSGAIGGV 107
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
352-884 |
1.45e-23 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 105.24 E-value: 1.45e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 352 WTRRLAPEEIGGATVYNRKWDDLSANLTFGVRGDLPGTSWNYEAAYNASIYTSQQAAPRLLSNVD---SFFLGPQLGTDS 428
Cdd:pfam00593 2 WQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGydyDLGDGLSWLSTL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 429 NGIGIYAPNAAHFAAPITPAQFNSIVGRSFEQDKSWLQALSLSGSGDL-FKLPAGAVKLAGALEWGSQGFSNDPDIQLgq 507
Cdd:pfam00593 82 RLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRLYGLYGLDGDLELSLDLsHDLLLGVELRTAGLDYRRLDDDAYDPYDP-- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 508 gvfYRASPGSHAGGTRARQAAGAELFIPLHKRLNVTLSGRYDR-----------LAIADSSVGKFTYGSGLEFRPLDTLL 576
Cdd:pfam00593 160 ---ANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHystdgddgnggGDNFSRSYSAFSPRLGLVYKPTDNLS 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 577 LRGNYATSFRAPDMNYLFLTQSRGYYPSVTdywrcqqagqptatcdykdltanfvkSGNPDLKPENGKSYGFGFVWSPSa 656
Cdd:pfam00593 237 LYASYSRGFRAPSLGELYGSGSGGGGGAVA--------------------------GGNPDLKPETSDNYELGLKYDDG- 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 657 DADLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrrvqrnpanAVLDPGAINQILTNPINAANERT 736
Cdd:pfam00593 290 RLSLSLALFYIDIKNLIT---------------------------------------SDPDGPGLGGTVYTYTNVGKARI 330
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 737 SGIDLNGKLRwrtaKWGRFQLQASYsqvlTFTYQQFAGDPTQDRLQDLSNSDWRNKLSASLGWSIGNWSSTLQLTRYGK- 815
Cdd:pfam00593 331 RGVELELSGR----LWGLGLSGGGY----TYTDADDDADADDTGNPLPNVPRHTANLGLTYDFPLGGWGARLGARYVGSg 402
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2158346502 816 ---VPNNAQTGYLTPTILANLSLGYQLSKQTSLGLIVNNLQDFIKKDYSDGAPYYPVGTYLPyGRQAWLELN 884
Cdd:pfam00593 403 errYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGP-GRTFYLGLS 473
|
|
| TonB-hemlactrns |
TIGR01786 |
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model ... |
24-854 |
1.76e-23 |
|
TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein; This model represents a family of TonB-dependent outer membrane receptor/transporters acting on iron-containing proteins such as hemoglobin, transferrin and lactoferrin. Two subfamily models with a narrower scope are contained within this model, the heme/hemoglobin receptor family protein model (TIGR01785) and the transferrin/lactoferrin receptor family model (TIGR01776). Accessions which score above trusted to this model while not scoring above trusted to the more specific models are most likely to be hemoglobin transporters. Nearly all of the species containing trusted hits to this model have access to hemoglobin, transferrin or lactoferrin or related proteins in their biological niche. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273808 [Multi-domain] Cd Length: 715 Bit Score: 106.73 E-value: 1.76e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 24 VTVTGSRIS----RSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANAISLRGLGPNHTL 99
Cdd:TIGR01786 3 ITVTATRTAdpqrRDLSVTPASVSVISREQLKSQQVRNLRDLLRYEP-------GVSVVEGGRGGSQGINIRGLDKNRVA 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 100 TLINGRRVADypTAYDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGAsehhgg 179
Cdd:TIGR01786 76 VLVDGIRQNT--SYGGQGSTFYAINSIDPELIKSIEIVKGASSSLYGSGALGGVVAFRTKDAADLLKPGKDLGG------ 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 180 engrlqlsgghswdQLSLVYGLELSQRnaiwsnQRGFMADNSSDGsapttiWSQQIKQGPNKGKyigagdcsafsSLFNG 259
Cdd:TIGR01786 148 --------------LSKLGYSSANNRF------TQSVAAAGRNDD------VDALVQATYRRGH-----------ELKNG 190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 260 SVRPYTINSRTGngvvcasgqaSPDYwtiqTANQSQNGYLSANYQLNehaelfSDALLGFNHTEnnTRGPAWTSLGGSSQ 339
Cdd:TIGR01786 191 NKANIGNESKRS----------KPNP----SDYKSQSFLAKLGWQLN------DAHRLGLSLEY--TQTDYDEPEMTNTS 248
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 340 YFLNQNTGQYEQWTRRLAPEEIGgatvynrkwdDLSANLTFGVRGDlpgTSWNYEAAYNASIYTSQQaAPRLLSnvdsff 419
Cdd:TIGR01786 249 YLTKPLGAPLLSSTVVLGDSKTR----------DRRTGLDYELNPD---NSWLDTVKLALDKQYIQL-YNYLNA------ 308
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 420 lgpqlgTDSNGIGIYAPNaahfaapitpaqfnsivgrSFEQDKSWLQALSLSGSGDLFKLPAGAVKLAGALEWGSQ---- 495
Cdd:TIGR01786 309 ------TSASDYPGVDKN-------------------GRYKDKYDYYTLGFDTNNKIEFSVHSLSLTYGLDRFKDKvstg 363
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 496 -GFSNDPDIQLGQGVFYraspGSHAGGTRARQAAGAELFIPLHKRLNVTLSGRYDRL------------AIADSSVGKFT 562
Cdd:TIGR01786 364 dSRRNLPTAAYNLYGYE----GENRPVKGSNFGLFLQDNIKLGDWLSLSAGLRYDHYktdpkadeskdyGAISKTYSRWS 439
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 563 YGSGLEFRPLDTLLLRGNYATSFRAPDMNYLFLTqsrGYYPSVTDYwrcqqagqptatcdykdltaNFVksGNPDLKPEN 642
Cdd:TIGR01786 440 PSLGLTYKPTPWLTLYYSYSQGFRAPSFDELYGT---GAHPGGGPY--------------------TFL--PNPNLKPET 494
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 643 GKSYGFGFVwspsadadLSLDYWNISINDLVTDLDqDKILRDEAACRSGQLDSNSSLCQdalrrvqrnpanavldpgain 722
Cdd:TIGR01786 495 SKNWEIGIN--------LHFDQLDFKVSYFRNDYK-DFIDLGIGVTAKGNMAQVGSNTI--------------------- 544
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 723 qilTNPINAANERTSGIDLNGKLRWRtakwGRFQLQASYSQVLTFTY---QQFAGDPTQDRLQDLSNSDWRNKLSASLGW 799
Cdd:TIGR01786 545 ---TNYVNIDNARIRGIELSGRYDLG----SFFSGPDGWTTTLKYGYtkgKDSDTNPWLNAITPLKVVLGLGYDHPDEKW 617
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2158346502 800 SIG---NWS---STLQLTRYGKVPNNAQTGYLTPT---ILANLSLGYQLSKQTSLGLIVNNLQD 854
Cdd:TIGR01786 618 GVGltlTFSgakDAVDAYATYYENGEAAKAGPLRTpsyTVVDLYGYYKPNKNLTLRFGVYNLLD 681
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
21-200 |
1.21e-22 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 103.70 E-value: 1.21e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqgadfGNTFTPAANA--ISLRGLGPNHT 98
Cdd:PRK13483 33 METVVVTASGYEQQIRDAPASISVITREDLENRFYRDLTDALLDVP-----------GVVVTGGGDRtdISLRGMGSQYT 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 99 LTLINGRRVADYPTAYDGSVNFVNLANIPA-AMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEHH 177
Cdd:PRK13483 102 LILVDGKRQSSRETRPNSDGPGVEQAWTPPlAAIERIEVIRGPMSSLYGSDAIGGVINIITRKVPNEWQGEVRLDTTLQE 181
|
170 180
....*....|....*....|....*....
gi 2158346502 178 GGENGRLQ-----LSGGHSWDQLSL-VYG 200
Cdd:PRK13483 182 NSDSGNVYqanffVNGPLIKDLLGLqLYG 210
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
21-887 |
1.52e-21 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 100.39 E-value: 1.52e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRI-SRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLP-----QNTGFTQGADfgntftpaanaISLRGLG 94
Cdd:COG4772 23 LETVVVTGSRAaEARLKDVPGSVSVVDREELENQAATSLREVLRRVPgvnvqEEDGFGLRPN-----------IGIRGLG 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 95 PNHT---LTLINGrrvadYPTAY----DGSVNFVNlaniPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKK--KTDGV 165
Cdd:COG4772 92 PRRSrgiTLLEDG-----IPIAPapygDPAAYYFP----DLERMERIEVLRGAAALRYGPQTVGGAINFVTRTipTAFGG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 166 DVNVKVGAsehHGGENGRLQLSGghSWDQLSlvYGLELSQRNaiwsnqrgfmadnsSDGsapttiwsqqikqgpnkgkyi 245
Cdd:COG4772 163 ELRVTGGS---FGYRRTHASVGG--TVGNFG--YLVEYSRKR--------------GDG--------------------- 200
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 246 gagdcsafsslfngsvrpytinsrtgngvvcasgqaspdyWTIQTANQSQNGYLSANYQLNEHAELfsDALLGFNHTENN 325
Cdd:COG4772 201 ----------------------------------------FRDNSGFDINDFNAKLGYRLSDRQEL--TLKFQYYDEDAN 238
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 326 TrgpawtsLGGSS--QYFLN--QNTGQYEQW-TRRLapeeiGGATVYNRKWDDlSANLTFGvrgdlpgtswnyeaAYnas 400
Cdd:COG4772 239 T-------PGGLTdaQFDADprQSYRPADQFdTRRT-----QLSLRYEHQLSD-NTTLTTT--------------AY--- 288
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 401 iytsqqaapRLLSNVDSFFlgPQLGTDSNGIGIYAPNAahfaapitPAQFNSivgRSFEqdkswlqaLSLSGSGDLFKLP 480
Cdd:COG4772 289 ---------YNDFSRNWYI--RQNTADPNTPGLGLRGN--------PRGYRS---YGIE--------PRLTHRFELGGVP 338
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 481 AgavklagALEWGSQGFSNDPDIQLGQGVFYRASPGshAGGTRARQ------AAGAELFIPLHKRLNVTLSGRY------ 548
Cdd:COG4772 339 H-------TLEVGLRYHREEEDRKQYVNTYGQGRSG--AGLRRDRRfsadalAAYAQNRFELTGRLTLTPGLRYehirrd 409
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 549 --DRLAIA-------DSSVGKFTYGSGLEFRPLDTLLLRGNYATSFRAPdmnylfltqsrgyypsvtdywrcqQAGQpta 619
Cdd:COG4772 410 rtDRYSTRtggddsgSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPP------------------------TFGD--- 462
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 620 tcdykdltANFVKSGNPDLKPENGKSYGFGFVWSPSADADLSLDYWNISINDlvtdldqdkilrdeaacrsgQLDSNSSl 699
Cdd:COG4772 463 --------LAYGNGGNPDLKPEKSWNYELGTRGRIGNGLSAEVALFYIDYDN--------------------ELGSCSA- 513
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 700 cqdalrrvqrnpanavldPGAINQILTnpiNAANERTSGIDLNGKLRWRTAKWGRFQLQASYSqVLTFTYQQFAGDPTQ- 778
Cdd:COG4772 514 ------------------AGGDRSTFT---NAGETRHQGLELALDYDLLKGGGLGLPLFAAYT-YTDAEFTSDFGPVFAg 571
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 779 DRLQDLSnsdwRNKLSASLGWSIGNWSSTLQLTRYGKVP----NNAQTGYLTPT---ILANLSLGYQLSKQTSLGLIVNN 851
Cdd:COG4772 572 NRLPYVP----RHQLTAGLGYEHGGWTANLNGRYVSEQFtdaaNTVADGSFGKIpsyTVLDLSASYDFGKNLSLFAGVNN 647
|
890 900 910
....*....|....*....|....*....|....*.
gi 2158346502 852 LQDfiKKDYSDGAPYYPVGTYLPYGRQAWLELNHHF 887
Cdd:COG4772 648 LFD--KRYIASRAPNYAAGIRPGPPRTVYAGLRLKF 681
|
|
| TonB-B12 |
TIGR01779 |
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane ... |
21-193 |
9.03e-19 |
|
TonB-dependent vitamin B12 receptor; This model represents the TonB-dependent outer membrane receptor found in gamma proteobacteria responsible for translocating the cobalt-containing vitamin B12 (cobalamin). [Transport and binding proteins, Other, Transport and binding proteins, Porins]
Pssm-ID: 273802 [Multi-domain] Cd Length: 614 Bit Score: 91.08 E-value: 9.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqGADFGNTFTPAANA-ISLRGLGPNHTL 99
Cdd:TIGR01779 28 LDTVVVTANRFAQTASQTLAPVTIITRQDIERTQAKSLPELLRRLP-------GVSIAQNGGRGQNTsLFLRGTESDHVL 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 100 TLINGRRVAdypTAYDGSVNFvnlANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASEHH-- 177
Cdd:TIGR01779 101 VLIDGIRFG---SAAAGAADF---QQLPVELVERIEYVRGPRSSLYGSEAIGGVINIITRRRSGGQGTTLSAGLGSLDyq 174
|
170 180
....*....|....*....|....*
gi 2158346502 178 ---------GGENGRLQLSGGHSWD 193
Cdd:TIGR01779 175 eysiasgvaIGENGWYSVALGTEST 199
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
21-160 |
9.92e-19 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 91.10 E-value: 9.92e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntgftqgadfGNTFTPAAN---AISLRGLGPNH 97
Cdd:PRK10064 30 GETMVVTASAVEQNLKDAPASISVITQEDLQRKPVQNLKDVLKEVP-----------GVQLTNEGDnrkGVSIRGLDSSY 98
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2158346502 98 TLTLINGRRVADYPTAYDGsvNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKK 160
Cdd:PRK10064 99 TLILIDGKRVNSRNAVFRH--NDFDLNWIPVDAIERIEVVRGPMSSLYGSDALGGVVNIITKK 159
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
24-164 |
5.11e-18 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 89.06 E-value: 5.11e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 24 VTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqNTGFTQGAdfgntftpAANAISLRGLGPNHTLTLIN 103
Cdd:PRK13513 38 MVVTASGFQQRIQDAPASISVVTREQLENKAYRDVTDALKDVP-GVVVTGGG--------STSDISIRGMAAKYTLILVD 108
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2158346502 104 GRRVADYPTA--YDGSvnfvnlaNI------PAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDG 164
Cdd:PRK13513 109 GKRVDTRSTRpnSDGS-------GIeqgwlpPLAAIERIEVVRGPMSSLYGSDAMGGVINIITRKVQKE 170
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
22-200 |
9.27e-18 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 88.14 E-value: 9.27e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 22 ERVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLpQNTGFTQGADfgntftpaANAISLRGLGPNHTLTL 101
Cdd:PRK13484 31 DTLVVTASGFTQQLRNAPASVSVITSEQLQKKPVSDLVDAVKDV-EGISITGGNE--------KPDISIRGLSGDYTLIL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 102 INGRRVADYPTAYDGSVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKT----DGVdvnVKVGASEHH 177
Cdd:PRK13484 102 VDGRRQSGRESRPNGSGGFEAGFIPPVEAIERIEVIRGPMSSLYGSDAIGGVINIITKPVNnqtwDGV---LGLGGIIQE 178
|
170 180
....*....|....*....|....*....
gi 2158346502 178 GGE-----NGRLQLSGGHSWDQLSL-VYG 200
Cdd:PRK13484 179 HGKfgnstTNDFYLSGPLIKDKLGLqLYG 207
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
42-353 |
1.14e-17 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 87.74 E-value: 1.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 42 VTVLTGSDIEKQGYTNVYDALNSLP-----QNTGFTQGAdfgntftpaanAISLRGLGPNHTLTLINGRRVADYptaydG 116
Cdd:PRK10641 46 TTVVTRDDIDRWQSKSVNDVLRRLPgvdiaQNGGLGQLS-----------SLFIRGTNSSHVLVLIDGVRLNQA-----G 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 117 SVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVG---------ASEHHGGENGRLQLS 187
Cdd:PRK10641 110 ISGSADLSQIPISLVQRIEYIRGPRSAVYGSDAIGGVVNIITTRDKPGTTLSAGWGsngyqnydgSTQQQLGDNTRVTLA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 188 GGHSWDQlslvyGLelsqrNAIWSNQRGFMADNSSDGSAPTTIWsqqikqgpnkgkyigAGDCSAFSSLFNGSVRPYTIN 267
Cdd:PRK10641 190 GDYTYTK-----GF-----DVVAYGNTGTQAQPDRDGFMSKTLW---------------GGLEHQFNDQWSGFVRGYGYD 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 268 SRTGNGVVCASGQASPDywTIQTANQSQNGylsanyQLNEHAELFSDALLG-------FNHTENNTRGPAWTSLGGSSQY 340
Cdd:PRK10641 245 NRTDYDAYYSPGSPLID--TRQLYSQSWDA------GLRYNGGIYSSQLIAsyshskdYNYDPHYGRYDSSATLDDMKQY 316
|
330
....*....|...
gi 2158346502 341 FLnqntgqyeQWT 353
Cdd:PRK10641 317 NV--------QWG 321
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
30-887 |
9.02e-15 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 78.38 E-value: 9.02e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 30 RISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPqntGFTQGADFGNTFtpaaNAISLRGLGpnhtltlingrrvAD 109
Cdd:COG4774 1 KTDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVP---GVTFGAGEGGNG----DSFSIRGFS-------------AS 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 110 YPTAYDGsVNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGasehhGGENGRLQLSGG 189
Cdd:COG4774 61 GDIYVDG-LRDPGQYRRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFTEVTLT-----YGSDGQRRATLD 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 190 HSWD-------QLSLVYGLELSQRNAIWSNQRGFMADNSSDGSAPTTIWS----QQIKQGPNKGkyigagdcsaFSSLFN 258
Cdd:COG4774 135 VNGPlgddlayRLNGMYRDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLdyeyQDDDRTPDYG----------VPAVAN 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 259 GsvRPYTINSRTGNGVvcasgqaSPDYWTIQTanqsQNGYLSANYQLNEHAELFSDALLGFNHTENNTRGPAWTSLGGSS 338
Cdd:COG4774 205 G--RPVDVDRSTFYGQ-------PDDYSDSET----DSATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNATGTV 271
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 339 QYFLNQNTGQYEQWTRRLapeeiggatvynrkwdDLSANL-TFGVRGDL-PGTSWNYEAAYNASIYTSQQAAPrllsnvd 416
Cdd:COG4774 272 TRSAYRRDQDNDTLSNQT----------------DLTGKFdTGGVKHTLlAGVEYSREDSDNARYSGGGTAPT------- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 417 sfflgpqlgtdsngIGIYAPNAAHFAAPITPAQFNSivgrsfeQDKSWLQALSLSgsgDLFKlpagavklagalewgsqg 496
Cdd:COG4774 329 --------------VNLYNPVYGAPVTGPTLGGADN-------DSRTDTTGLYLQ---DTIS------------------ 366
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 497 fsndpdiqlgqgvfyraspgshaggtrarqaagaelfipLHKRLNVTLSGRYDRL-----------AIADSSVGKFTYGS 565
Cdd:COG4774 367 ---------------------------------------LTDRWSLLAGLRYDRFdtdytdrttgaTTSSYDDSAFSPRA 407
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 566 GLEFRPLDTLLLRGNYATSFRapdmnylfltqsrgyypsvtdywrcQQAGQPTATcdykdltanfvkSGNPDLKPENGKS 645
Cdd:COG4774 408 GLVYKPTPNLSLYASYSTSFN-------------------------PGGGAPSLS------------NAGQALDPEKSRQ 450
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 646 YGFGFVWSPSAD-ADLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrrvqRNPANAvldpgainqi 724
Cdd:COG4774 451 YEVGVKWDLLDGrLSLTAALFRIEKTNVRT----------------------------------TDPANP---------- 486
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 725 lTNPINAANERTSGIDLNGKLRWrTAKWgrfQLQASYsqvltfTYQqfagDPTQDRLQDLSNSDwrNKL------SASLG 798
Cdd:COG4774 487 -GVYVQTGEQRSRGVELEATGEL-TPGW---SVLAGY------TYL----DAEITKSANAANVG--NRLpnvprhSASLW 549
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 799 ----WSIGNWSSTLQLTRYGKVP-NNAQTGYLTPTILANLSLGYQLSKQTSLGLIVNNLQDfikKDYSDGApyYPVGTYL 873
Cdd:COG4774 550 ttydLPLPGLTLGGGVRYVGSRYaDAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTD---KRYYASA--YGSGYVT 624
|
890
....*....|....*
gi 2158346502 874 P-YGRQAWLELNHHF 887
Cdd:COG4774 625 PgAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
23-163 |
1.01e-14 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 78.40 E-value: 1.01e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 23 RVTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNslpQNTGFTQGADFGNTFTpaanAISLRGLGPNHTLtlI 102
Cdd:COG4773 50 KSSSTATKLDTPLRETPQSVSVVTRQLIEDQGATTLDDALR---NVPGVTVSSYDGGGRD----SFSIRGFSIDNYL--R 120
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2158346502 103 NGRRVADYptaydgsvnfvNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTD 163
Cdd:COG4773 121 DGLPLGGF-----------GGGQPDTANLERVEVLKGPAGLLYGAGSPGGLVNLVTKRPTA 170
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
21-163 |
5.73e-13 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 72.75 E-value: 5.73e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRISRSAqegpTSVTVLTGSDIEKQGYTN-VYDALNSLP--QNTGFTQGADFGNTftpaaNAISLRGLGPNH 97
Cdd:PRK13524 38 EDTIVVTAAEQNLQA----PGVSTITAEDIRKRPPANdVSEIIRTMPgvNLTGNSTSGQRGNN-----RQIDIRGMGPEN 108
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2158346502 98 TLTLINGRRVadyptaydGSVNFVNL------------ANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTD 163
Cdd:PRK13524 109 TLILIDGKPV--------SSRNSVRYgwrgerdtrgdtNWVPPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKPTG 178
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
24-172 |
1.25e-12 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 71.59 E-value: 1.25e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 24 VTVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLP-----QNTGFTQGADfgntftpaanaISLRGLGPNHT 98
Cdd:PRK13486 28 MIVSASGYEKKLTNAAASVSVISQEELQSSQYHDLAEALRSVEgvdveSGTGKTGGLE-----------ISIRGMPASYT 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2158346502 99 LTLINGRRVADYPTAYDGSVNFVNLANIPA-AMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVG 172
Cdd:PRK13486 97 LILIDGVRQGGSSDVTPNGFSAMNTGFMPPlAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKNADKWLSSVNAG 171
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
42-163 |
3.47e-12 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 70.17 E-value: 3.47e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 42 VTVLTGSDIEKQGYTN-VYDALNSLP--QNTGFTQGADFGNTftpaaNAISLRGLGPNHTLTLINGRRVADYPT---AYD 115
Cdd:PRK13528 53 VSIITAEDIKKRPPVNdLSDIIRKMPgvNLTGNSASGTRGNN-----RQIDIRGMGPENTLILIDGVPVTSRNSvrySWR 127
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2158346502 116 GSVNFVNLAN-IPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTD 163
Cdd:PRK13528 128 GERDTRGDTNwVPPEMVERIEVIRGPAAARYGSGAAGGVVNIITKRPTN 176
|
|
| TonB-Xanth-Caul |
TIGR01782 |
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ... |
21-887 |
2.93e-11 |
|
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain] Cd Length: 845 Bit Score: 67.36 E-value: 2.93e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 21 LERVTVTGSRIS----RSAQEGPTSVT-VLTGSDIEKQGYTNVYDALNSLPqntGFTQGADFGNtftpaANAISLRGLGP 95
Cdd:TIGR01782 1 LDAVQVTGQRASlekaIDAKRDADSVVdVISAEDIGKLPDVNVAEALQRVP---GVSIERDQGE-----GRYVSVRGLGP 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 96 NHTLTLINGRRVAdypTAyDGSVNFVNLANIPAAMIDRIEIlNGGASAIYGSDAIAGVVNVilkkKT------DGVDVNV 169
Cdd:TIGR01782 73 SYNRTTLNGRTIA---ST-DSGGRAFSLDLLPSELVSGVEV-YKTPTADMDEGGIGGTVDL----RTrspfdyDGRTLSG 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 170 KVGAsehhggenGRLQLSGGHSWDqlslvYGLELSQRNAIWSNQRGFMA-------DNSSDGSAPTTIWSQQIKQGPNKG 242
Cdd:TIGR01782 144 SAQG--------GYNDLAGKDKPG-----PRGAASYSWTFGDGQFGVLLsasyqkrDFAEDNVETENWGTYTSADGGAQG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 243 KYIGAGDCSAFSSL------FNGSV--RP--------YTINSR------TGNGVVCASGQASPDYWTIQTAN-------Q 293
Cdd:TIGR01782 211 LYFPRGVRYRSYRNdrerkgVNGSLqwRPsdalelylDTLYSKydddetRQQIEFRTLNGGSTVITSNQTATsgalvqgT 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 294 SQNGYLSANYQLNEHAELFSDALLGFNHTENN---------TRG-----------------------------PAWTSLG 335
Cdd:TIGR01782 291 VANLQILVEARYNEEKETTTSLTLGGEWTGDRwtldgdlgySKAtrdrpdrvtrfftaptpgydfdyrggptlTLGTPAD 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 336 GSSQYFLNQNT---GQYEQWTRRLAPEEIGGATVyNRKWDDLSANLTFGVR-----GDLPGTSWNYEAAYNASIYTSQQA 407
Cdd:TIGR01782 371 GDDASNYTNPAngeLRRTQISYQKAEDSEDAAQL-DATFDGPFTSLKFGVRyrrrdKTNRGSRYRRSIIGATGASGLAGV 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 408 APRLLSNVDSFFLGPQLGTDSNG----IGIYAPNAAHFAAPITPAQFNSIVGRSFEQDKS-WLQAlSLSGSGDLFKLPag 482
Cdd:TIGR01782 450 PSDLAGAGLDGGLGGPLTGWDPAdldaFLNAARGDAAGGGTYTYASTAPNTYTVTEDTTAaYAMA-NFDTGLRLRGNV-- 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 483 avklaGA----LEWGSQGFSNDPdiqlgqgvfyrASPGSHAGGTRARQAAGAELFIPlhkRLNVTlsgrydrlaiadssv 558
Cdd:TIGR01782 527 -----GVryerTDQTSDGWQSQP-----------AANGTGSVLVPVSADRDYTDVLP---SLNLA--------------- 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 559 gkftygsgleFRPLDTLLLRGNYATSFRAPDmnylfLTQSRGYYPSVTDywrcQQAGQPTATcdykdltanfvkSGNPDL 638
Cdd:TIGR01782 573 ----------YDLTDDLVLRFAASKTITRPD-----FGDLAANTSLSDD----GTGGTVTVS------------GGNPDL 621
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 639 KPENGKSYGFGFVWSPSADADLSLDYWNISINDLVTdldqdkilrdeaacrsgqldsnsslcqdalrRVQRNPANAVLDP 718
Cdd:TIGR01782 622 KPYESDNLDLSLEWYFGPGGLLSAAVFYKDIKNFIV-------------------------------TTTSTETNDGGGG 670
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 719 GAINQIL-TNPINAANERTS-GIDLNGKLRWRT--AKWGRFQLQASYsqvlTFTYQQFA-----GDPTQDRLQDLSNSDW 789
Cdd:TIGR01782 671 LVVAGVLvSRPVNGGKAGKIrGVELGYQQTFDFlpGPLSGFGVQANY----TYVDSEADpsvdgVQRRKLPLPGLSKNTA 746
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 790 -------RNKLSASLGWsigNWSSTlQLTRYGKVPNNAQTGYLTPTILANLSLGYQLSKQTSLGLIVNNLQDFIKKDYSd 862
Cdd:TIGR01782 747 natlyyeKGGFSARLSY---NYRSD-YLLDVGGSNINRLDRYVDPRGQLDLSASYQVSDHLSLGLQASNLTNEPSRWYT- 821
|
970 980
....*....|....*....|....*
gi 2158346502 863 GAPYYPVGtYLPYGRQAWLELNHHF 887
Cdd:TIGR01782 822 GGKQRPRE-YVETGRTYMLGLRYKF 845
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
39-175 |
4.66e-09 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 60.12 E-value: 4.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 39 PTSVTVLTGSDIEKQGYTNVYDALNSLPqnTGFTQGADFGNTFtpaaNAISLRGLGPNhtlTLINGRRVADYPTAYDGsv 118
Cdd:TIGR01783 3 PQSVSVITRQELEDQQAGSLSEALQRVP--GVVVGGSGGTTQF----GNITIRGFGLE---VDIDNVYLDGVPLLSRG-- 71
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2158346502 119 nfvNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTDGVDVNVKVGASE 175
Cdd:TIGR01783 72 ---NLAIVDPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQDEPKGSVTFGAGT 125
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
25-163 |
2.02e-06 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 51.73 E-value: 2.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 25 TVTGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYD-ALNSLPQNTGFTQGADfgntftPAANAISLRGLGPNHTLTLIN 103
Cdd:PRK14050 66 TATGSKTDTPITEIPQSVSVVGRQEMDDRGVTNKVDeALRYTPGVLSQPFGTD------GDTDWFYIRGFDATQTGVFLD 139
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 104 GRRVADYptaydGSVNFVnlanIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKTD 163
Cdd:PRK14050 140 GLNLFSY-----GFGGFQ----IDPFMLERVEVLKGPASVLYGGSNPGGIVNMVSKRPLD 190
|
|
| PRK10044 |
PRK10044 |
ferrichrome outer membrane transporter; Provisional |
27-162 |
1.60e-05 |
|
ferrichrome outer membrane transporter; Provisional
Pssm-ID: 236643 [Multi-domain] Cd Length: 727 Bit Score: 48.60 E-value: 1.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2158346502 27 TGSRISRSAQEGPTSVTVLTGSDIEKQGYTNVYDALNSLPQNTGFTQGADfgNTFtpaaNAISLRGLGPNHTLT--LING 104
Cdd:PRK10044 68 TGTKTDTPIEKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGAS--NTY----DHLIIRGFAASGQSQnnYLDG 141
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2158346502 105 RRVADyptaydgsvNFVNLANIPAAMIDRIEILNGGASAIYGSDAIAGVVNVILKKKT 162
Cdd:PRK10044 142 LKLQG---------NFYNDAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPT 190
|
|
| |
