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Conserved domains on  [gi|2165432778|ref|WP_231876550|]
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MULTISPECIES: class I SAM-dependent methyltransferase [unclassified Oleiphilus]

Protein Classification

class I SAM-dependent methyltransferase( domain architecture ID 10789277)

class I SAM-dependent methyltransferase is an enzyme that uses S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyl transfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

CATH:  2.20.25.110
EC:  2.1.1.-
Gene Ontology:  GO:0008168|GO:1904047
PubMed:  12826405
SCOP:  3000118

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 13-126 1.35e-24

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


:

Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 93.13  E-value: 1.35e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQFYdPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIPLDDESVDTVLLTFTLCTIVD 92
Cdd:COG2226    24 ARVLDLGCGTGRLALAL-AERGARVTGVDISPEMLELARERAAEAGLNVEFVVGDAEDLPFPDGSFDLVISSFVLHHLPD 102

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2165432778  93 TRTALAQMRRVLKPNGKLLFCEHGLSADLNVQKW 126
Cdd:COG2226   103 PERALAEIARVLKPGGRLVVVDFSPPDLAELEEL 136
 
Name Accession Description Interval E-value
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 13-126 1.35e-24

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 93.13  E-value: 1.35e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQFYdPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIPLDDESVDTVLLTFTLCTIVD 92
Cdd:COG2226    24 ARVLDLGCGTGRLALAL-AERGARVTGVDISPEMLELARERAAEAGLNVEFVVGDAEDLPFPDGSFDLVISSFVLHHLPD 102

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2165432778  93 TRTALAQMRRVLKPNGKLLFCEHGLSADLNVQKW 126
Cdd:COG2226   103 PERALAEIARVLKPGGRLVVVDFSPPDLAELEEL 136
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 16-112 5.40e-19

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 77.32  E-value: 5.40e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  16 LEVGAGSAINLQFYdPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLpgEQIPLDDESVDTVLLTFTLCTIVDTRT 95
Cdd:pfam08241   1 LDVGCGTGLLTELL-ARLGARVTGVDISPEMLELAREKAPREGLTFVVGDA--EDLPFPDNSFDLVLSSEVLHHVEDPER 77

                          90
                  ....*....|....*..
gi 2165432778  96 ALAQMRRVLKPNGKLLF 112
Cdd:pfam08241  78 ALREIARVLKPGGILII 94
ubiE PRK00216
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol ...
 14-114 2.87e-12

bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE;


Pssm-ID: 234689 [Multi-domain]  Cd Length: 239  Bit Score: 62.86  E-value: 2.87e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGS---AINLQFYDPKIVEfVWGLEPSIGM----RNKAKSNVVQSGIDWRWLDlpGEQIPLDDESVDTVLLTFT 86
Cdd:PRK00216   54 KVLDLACGTgdlAIALAKAVGKTGE-VVGLDFSEGMlavgREKLRDLGLSGNVEFVQGD--AEALPFPDNSFDAVTIAFG 130

                          90       100
                  ....*....|....*....|....*...
gi 2165432778  87 LCTIVDTRTALAQMRRVLKPNGKLLFCE 114
Cdd:PRK00216  131 LRNVPDIDKALREMYRVLKPGGRLVILE 158
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 14-113 1.33e-08

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 50.51  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGSAINLQFYDPKIVEFVWGLEPSIGMRNKAKSNVVQSGID-WRWLDLPGEQIPLD-DESVDTVLLTFTLCTIV 91
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALLADnVEVLKGDAEELPPEaDESFDVIISDPPLHHLV 80

                          90       100
                  ....*....|....*....|...
gi 2165432778  92 DTRTA-LAQMRRVLKPNGKLLFC 113
Cdd:cd02440    81 EDLARfLEEARRLLKPGGVLVLT 103
 
Name Accession Description Interval E-value
UbiE COG2226
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ...
 13-126 1.35e-24

Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 441828 [Multi-domain]  Cd Length: 143  Bit Score: 93.13  E-value: 1.35e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQFYdPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIPLDDESVDTVLLTFTLCTIVD 92
Cdd:COG2226    24 ARVLDLGCGTGRLALAL-AERGARVTGVDISPEMLELARERAAEAGLNVEFVVGDAEDLPFPDGSFDLVISSFVLHHLPD 102

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2165432778  93 TRTALAQMRRVLKPNGKLLFCEHGLSADLNVQKW 126
Cdd:COG2226   103 PERALAEIARVLKPGGRLVVVDFSPPDLAELEEL 136
Methyltransf_11 pfam08241
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 16-112 5.40e-19

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 462406 [Multi-domain]  Cd Length: 94  Bit Score: 77.32  E-value: 5.40e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  16 LEVGAGSAINLQFYdPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLpgEQIPLDDESVDTVLLTFTLCTIVDTRT 95
Cdd:pfam08241   1 LDVGCGTGLLTELL-ARLGARVTGVDISPEMLELAREKAPREGLTFVVGDA--EDLPFPDNSFDLVLSSEVLHHVEDPER 77

                          90
                  ....*....|....*..
gi 2165432778  96 ALAQMRRVLKPNGKLLF 112
Cdd:pfam08241  78 ALREIARVLKPGGILII 94
Methyltransf_25 pfam13649
Methyltransferase domain; This family appears to be a methyltransferase domain.
 15-108 2.89e-18

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 463945 [Multi-domain]  Cd Length: 96  Bit Score: 75.29  E-value: 2.89e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  15 VLEVGAGSAINLQFYDPKIVEFVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIPLDDESVDTVLLTFTL--CTIVD 92
Cdd:pfam13649   1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLERARERAAEAGLNVEFVQGDAEDLPFPDGSFDLVVSSGVLhhLPDPD 80

                          90
                  ....*....|....*.
gi 2165432778  93 TRTALAQMRRVLKPNG 108
Cdd:pfam13649  81 LEAALREIARVLKPGG 96
UbiG COG2227
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ...
 13-112 6.70e-17

2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 441829 [Multi-domain]  Cd Length: 126  Bit Score: 72.74  E-value: 6.70e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQF-----YDpkivefVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLpgEQIPLDDESVDTVLLTFTL 87
Cdd:COG2227    26 GRVLDVGCGTGRLALAlarrgAD------VTGVDISPEALEIARERAAELNVDFVQGDL--EDLPLEDGSFDLVICSEVL 97

                          90       100
                  ....*....|....*....|....*
gi 2165432778  88 CTIVDTRTALAQMRRVLKPNGKLLF 112
Cdd:COG2227    98 EHLPDPAALLRELARLLKPGGLLLL 122
ubiE PRK00216
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol ...
 14-114 2.87e-12

bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE;


Pssm-ID: 234689 [Multi-domain]  Cd Length: 239  Bit Score: 62.86  E-value: 2.87e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGS---AINLQFYDPKIVEfVWGLEPSIGM----RNKAKSNVVQSGIDWRWLDlpGEQIPLDDESVDTVLLTFT 86
Cdd:PRK00216   54 KVLDLACGTgdlAIALAKAVGKTGE-VVGLDFSEGMlavgREKLRDLGLSGNVEFVQGD--AEALPFPDNSFDAVTIAFG 130

                          90       100
                  ....*....|....*....|....*...
gi 2165432778  87 LCTIVDTRTALAQMRRVLKPNGKLLFCE 114
Cdd:PRK00216  131 LRNVPDIDKALREMYRVLKPGGRLVILE 158
Methyltransf_23 pfam13489
Methyltransferase domain; This family appears to be a methyltransferase domain.
 1-158 1.44e-11

Methyltransferase domain; This family appears to be a methyltransferase domain.


Pssm-ID: 404385 [Multi-domain]  Cd Length: 162  Bit Score: 59.75  E-value: 1.44e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778   1 MKLRSQIVPKC--SGRVLEVGAGSAINLQFYDPKIVEfVWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIplddesv 78
Cdd:pfam13489  10 ADLLLRLLPKLpsPGRVLDFGCGTGIFLRLLRAQGFS-VTGVDPSPIAIERALLNVRFDQFDEQEAAVPAGKF------- 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  79 DTVLLTFTLCTIVDTRTALAQMRRVLKPNGKLLFCEHGLSADLNvQKWQNriNPLWSRLAGGCQL--NRSIDLLISDAGF 156
Cdd:pfam13489  82 DVIVAREVLEHVPDPPALLRQIAALLKPGGLLLLSTPLASDEAD-RLLLE--WPYLRPRNGHISLfsARSLKRLLEEAGF 158


                  ..
gi 2165432778 157 QI 158
Cdd:pfam13489 159 EV 160
Methyltransf_12 pfam08242
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
 16-110 4.14e-11

Methyltransferase domain; Members of this family are SAM dependent methyltransferases.


Pssm-ID: 400515 [Multi-domain]  Cd Length: 98  Bit Score: 56.99  E-value: 4.14e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  16 LEVGAGSAINLQFYDPKIVE-FVWGLEPSIGMRNKAKSNVVQSGI-DWRWLDLPGEQIP-LDDESVDTVLLTFTLCTIVD 92
Cdd:pfam08242   1 LEIGCGTGTLLRALLEALPGlEYTGLDISPAALEAARERLAALGLlNAVRVELFQLDLGeLDPGSFDVVVASNVLHHLAD 80

                          90
                  ....*....|....*...
gi 2165432778  93 TRTALAQMRRVLKPNGKL 110
Cdd:pfam08242  81 PRAVLRNIRRLLKPGGVL 98
AdoMet_MTases cd02440
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ...
 14-113 1.33e-08

S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).


Pssm-ID: 100107 [Multi-domain]  Cd Length: 107  Bit Score: 50.51  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGSAINLQFYDPKIVEFVWGLEPSIGMRNKAKSNVVQSGID-WRWLDLPGEQIPLD-DESVDTVLLTFTLCTIV 91
Cdd:cd02440     1 RVLDLGCGTGALALALASGPGARVTGVDISPVALELARKAAAALLADnVEVLKGDAEELPPEaDESFDVIISDPPLHHLV 80

                          90       100
                  ....*....|....*....|...
gi 2165432778  92 DTRTA-LAQMRRVLKPNGKLLFC 113
Cdd:cd02440    81 EDLARfLEEARRLLKPGGVLVLT 103
Tam COG4106
Trans-aconitate methyltransferase [Energy production and conversion];
13-112 3.78e-07

Trans-aconitate methyltransferase [Energy production and conversion];


Pssm-ID: 443282 [Multi-domain]  Cd Length: 100  Bit Score: 46.36  E-value: 3.78e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQFYDPKIVEF-VWGLEPSIGMRNKAKSNVvqSGIDWRWLDLpgEQIPLdDESVDTVLLTFTLCTIV 91
Cdd:COG4106     3 RRVLDLGCGTGRLTALLAERFPGArVTGVDLSPEMLARARARL--PNVRFVVADL--RDLDP-PEPFDLVVSNAALHWLP 77

                          90       100
                  ....*....|....*....|.
gi 2165432778  92 DTRTALAQMRRVLKPNGKLLF 112
Cdd:COG4106    78 DHAALLARLAAALAPGGVLAV 98
Ubie_methyltran pfam01209
ubiE/COQ5 methyltransferase family;
46-114 6.43e-07

ubiE/COQ5 methyltransferase family;


Pssm-ID: 395966 [Multi-domain]  Cd Length: 228  Bit Score: 47.82  E-value: 6.43e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2165432778  46 MRNKAKSNVvqsgidwRWLDLPGEQIPLDDESVDTVLLTFTLCTIVDTRTALAQMRRVLKPNGKLLFCE 114
Cdd:pfam01209  87 AKEEGKYNI-------EFLQGNAEELPFEDDSFDIVTISFGLRNFPDYLKVLKEAFRVLKPGGRVVCLE 148
SmtA COG0500
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ...
 12-121 6.66e-07

SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];


Pssm-ID: 440266 [Multi-domain]  Cd Length: 199  Bit Score: 47.60  E-value: 6.66e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  12 SGRVLEVGAGSAINLQFYDPKIVEFVWGLEPSIGMRNKAKSNVVQSG---IDWRWLDLPGEQiPLDDESVDTVLLTFTLC 88
Cdd:COG0500    27 GGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIALARARAAKAGlgnVEFLVADLAELD-PLPAESFDLVVAFGVLH 105

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2165432778  89 TI--VDTRTALAQMRRVLKPNGKLLFCEHGLSADL 121
Cdd:COG0500   106 HLppEEREALLRELARALKPGGVLLLSASDAAAAL 140
COG4976 COG4976
Predicted methyltransferase, contains TPR repeat [General function prediction only];
13-115 9.16e-07

Predicted methyltransferase, contains TPR repeat [General function prediction only];


Pssm-ID: 444001 [Multi-domain]  Cd Length: 181  Bit Score: 46.92  E-value: 9.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  13 GRVLEVGAGSAINLQFYDPKiVEFVWGLEPSIGMRNKAKSNVVQsgIDWRWLDLPgeQIPLDDESVDTVLLTFTLCTIVD 92
Cdd:COG4976    48 GRVLDLGCGTGLLGEALRPR-GYRLTGVDLSEEMLAKAREKGVY--DRLLVADLA--DLAEPDGRFDLIVAADVLTYLGD 122

                          90       100
                  ....*....|....*....|...
gi 2165432778  93 TRTALAQMRRVLKPNGKLLFCEH 115
Cdd:COG4976   123 LAAVFAGVARALKPGGLFIFSVE 145
PRK08317 PRK08317
hypothetical protein; Provisional
 37-114 1.06e-06

hypothetical protein; Provisional


Pssm-ID: 181382 [Multi-domain]  Cd Length: 241  Bit Score: 47.24  E-value: 1.06e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2165432778  37 VWGLEPSIGMRNKAKSNVVQSGIDWRWLDLPGEQIPLDDESVDTVLLTFTLCTIVDTRTALAQMRRVLKPNGKLLFCE 114
Cdd:PRK08317   47 VVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124
Methyltransf_31 pfam13847
Methyltransferase domain; This family appears to have methyltransferase activity.
 14-140 2.63e-05

Methyltransferase domain; This family appears to have methyltransferase activity.


Pssm-ID: 463998 [Multi-domain]  Cd Length: 150  Bit Score: 42.40  E-value: 2.63e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGS---AINLQFYDPKIVEFVwGLEPSIGMRNKAKSNVVQSGIDW------RWLDLPGEqipLDDESVDTVLLT 84
Cdd:pfam13847   6 RVLDLGCGTghlSFELAEELGPNAEVV-GIDISEEAIEKARENAQKLGFDNvefeqgDIEELPEL---LEDDKFDVVISN 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2165432778  85 FTLCTIVDTRTALAQMRRVLKPNGKLLFCEHGLSADL--NVQKWQNRINPLWSRLAGG 140
Cdd:pfam13847  82 CVLNHIPDPDKVLQEILRVLKPGGRLIISDPDSLAELpaHVKEDSTYYAGCVGGAILK 139
arsM PRK11873
arsenite methyltransferase;
46-110 9.60e-04

arsenite methyltransferase;


Pssm-ID: 237007 [Multi-domain]  Cd Length: 272  Bit Score: 38.78  E-value: 9.60e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2165432778  46 MRNKAKSNVVQSGID---WRWLDLpgEQIPLDDESVDTVLltfTLCTI---VDTRTALAQMRRVLKPNGKL 110
Cdd:PRK11873  114 MLAKARANARKAGYTnveFRLGEI--EALPVADNSVDVII---SNCVInlsPDKERVFKEAFRVLKPGGRF 179
PLN02232 PLN02232
ubiquinone biosynthesis methyltransferase
 63-126 2.90e-03

ubiquinone biosynthesis methyltransferase


Pssm-ID: 165876  Cd Length: 160  Bit Score: 36.59  E-value: 2.90e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2165432778  63 WLDLPGEQIPLDDESVDTVLLTFTLCTIVDTRTALAQMRRVLKPNGK---LLFCEHGLSADLNVQKW 126
Cdd:PLN02232   30 WIEGDAIDLPFDDCEFDAVTMGYGLRNVVDRLRAMKEMYRVLKPGSRvsiLDFNKSNQSVTTFMQGW 96
PRK10258 PRK10258
biotin biosynthesis protein BioC; Provisional
 69-127 3.53e-03

biotin biosynthesis protein BioC; Provisional


Pssm-ID: 182340 [Multi-domain]  Cd Length: 251  Bit Score: 37.04  E-value: 3.53e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2165432778  69 EQIPLDDESVDTVL--LTFTLCTivDTRTALAQMRRVLKPNGKLLFCE--HGLSADLNvQKWQ 127
Cdd:PRK10258   95 ESLPLATATFDLAWsnLAVQWCG--NLSTALRELYRVVRPGGVVAFTTlvQGSLPELH-QAWQ 154
Cfa COG2230
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ...
 14-112 6.67e-03

Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];


Pssm-ID: 441831 [Multi-domain]  Cd Length: 158  Bit Score: 35.68  E-value: 6.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165432778  14 RVLEVGAGSAINL----QFYDpkiVEfVWGLEPSIGMRNKAKSNVVQSGIDWR-------WLDLPGeqipldDESVDTVL 82
Cdd:COG2230    54 RVLDIGCGWGGLAlylaRRYG---VR-VTGVTLSPEQLEYARERAAEAGLADRvevrladYRDLPA------DGQFDAIV 123

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2165432778  83 LTFTLCTIVD--TRTALAQMRRVLKPNGKLLF 112
Cdd:COG2230   124 SIGMFEHVGPenYPAYFAKVARLLKPGGRLLL 155
PLN02233 PLN02233
ubiquinone biosynthesis methyltransferase
 63-109 7.35e-03

ubiquinone biosynthesis methyltransferase


Pssm-ID: 177877 [Multi-domain]  Cd Length: 261  Bit Score: 36.02  E-value: 7.35e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 2165432778  63 WLDLPGEQIPLDDESVDTVLLTFTLCTIVDTRTALAQMRRVLKPNGK 109
Cdd:PLN02233  131 WIEGDATDLPFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSR 177
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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