NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2165615989|ref|WP_231982704|]
View 

MULTISPECIES: DUF5631 domain-containing protein [Mycobacterium tuberculosis complex]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF5632 pfam18646
Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal ...
 176-258 3.43e-37

Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal region of Rv3899c, a hypothetical protein from Mycobacterium tuberculosis which is conserved across mycobacteria.


:

Pssm-ID: 408428  Cd Length: 80  Bit Score: 129.45  E-value: 3.43e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 176 AAEQQRLQRIVDAVARQEPRISWAAGLRDDGtTTLLVTDLAGGWIPPHVRLPANVTLLEPTarRRDADVIDLLGAVVAVA 255
Cdd:pfam18646   1 TTAQQRLQRLVDAVARQEPRLRWAAGLRDDG-TTVLVTDLAGGWIPPGVDLPAGVTLLEPA--RRSGTLEALLGAVTVTA 77


                  ...
gi 2165615989 256 AHE 258
Cdd:pfam18646  78 AYT 80
DUF5631 super family cl39964
Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal ...
 286-378 1.15e-33

Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.


The actual alignment was detected with superfamily member pfam18645:

Pssm-ID: 436645  Cd Length: 96  Bit Score: 120.92  E-value: 1.15e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 286 VDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID 365
Cdd:pfam18645   1 IDELGWTLSEATRWRDGLPRIAHTLAKAAARGTGVLDNEVDLLRVHLDTARHQVLAAYPNVDPALVLNWMLLAAIDALID 80

                          90
                  ....*....|...
gi 2165615989 366 EQDYLANYHLAWY 378
Cdd:pfam18645  81 GDEVAANYHLAWF 93
 
Name Accession Description Interval E-value
DUF5632 pfam18646
Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal ...
 176-258 3.43e-37

Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal region of Rv3899c, a hypothetical protein from Mycobacterium tuberculosis which is conserved across mycobacteria.


Pssm-ID: 408428  Cd Length: 80  Bit Score: 129.45  E-value: 3.43e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 176 AAEQQRLQRIVDAVARQEPRISWAAGLRDDGtTTLLVTDLAGGWIPPHVRLPANVTLLEPTarRRDADVIDLLGAVVAVA 255
Cdd:pfam18646   1 TTAQQRLQRLVDAVARQEPRLRWAAGLRDDG-TTVLVTDLAGGWIPPGVDLPAGVTLLEPA--RRSGTLEALLGAVTVTA 77


                  ...
gi 2165615989 256 AHE 258
Cdd:pfam18646  78 AYT 80
DUF5631 pfam18645
Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal ...
 286-378 1.15e-33

Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.


Pssm-ID: 436645  Cd Length: 96  Bit Score: 120.92  E-value: 1.15e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 286 VDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID 365
Cdd:pfam18645   1 IDELGWTLSEATRWRDGLPRIAHTLAKAAARGTGVLDNEVDLLRVHLDTARHQVLAAYPNVDPALVLNWMLLAAIDALID 80

                          90
                  ....*....|...
gi 2165615989 366 EQDYLANYHLAWY 378
Cdd:pfam18645  81 GDEVAANYHLAWF 93
 
Name Accession Description Interval E-value
DUF5632 pfam18646
Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal ...
 176-258 3.43e-37

Family of unknown function (DUF5632); This an alpha-beta-alpha domain found at the N-terminal region of Rv3899c, a hypothetical protein from Mycobacterium tuberculosis which is conserved across mycobacteria.


Pssm-ID: 408428  Cd Length: 80  Bit Score: 129.45  E-value: 3.43e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 176 AAEQQRLQRIVDAVARQEPRISWAAGLRDDGtTTLLVTDLAGGWIPPHVRLPANVTLLEPTarRRDADVIDLLGAVVAVA 255
Cdd:pfam18646   1 TTAQQRLQRLVDAVARQEPRLRWAAGLRDDG-TTVLVTDLAGGWIPPGVDLPAGVTLLEPA--RRSGTLEALLGAVTVTA 77


                  ...
gi 2165615989 256 AHE 258
Cdd:pfam18646  78 AYT 80
DUF5631 pfam18645
Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal ...
 286-378 1.15e-33

Family of unknown function (DUF5631); This is an alpha helical domain found at the C-terminal region of the hypothetical protein Rv3899c from Mycobacterium tuberculosis which is conserved across mycobacteria.


Pssm-ID: 436645  Cd Length: 96  Bit Score: 120.92  E-value: 1.15e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2165615989 286 VDEFGPTLVEAVRRRDSLPRIAQAIALPAVRKTGVLENEAELLHGCITAVKESVLKAYPSHELTAVGDWMLLAAIEALID 365
Cdd:pfam18645   1 IDELGWTLSEATRWRDGLPRIAHTLAKAAARGTGVLDNEVDLLRVHLDTARHQVLAAYPNVDPALVLNWMLLAAIDALID 80

                          90
                  ....*....|...
gi 2165615989 366 EQDYLANYHLAWY 378
Cdd:pfam18645  81 GDEVAANYHLAWF 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH