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Conserved domains on  [gi|2167549623|ref|WP_232219420|]
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MULTISPECIES: DUF3052 domain-containing protein [unclassified Actinomyces]

Protein Classification

DUF3052 domain-containing protein( domain architecture ID 10567950)

DUF3052 domain-containing protein similar to Mycobacterium tuberculosis protein Rv2239c

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF3052 pfam11253
Protein of unknown function (DUF3052); This family of proteins with unknown function appears ...
 18-140 2.41e-47

Protein of unknown function (DUF3052); This family of proteins with unknown function appears to be restricted to Actinobacteria.


:

Pssm-ID: 431760  Cd Length: 123  Bit Score: 148.87  E-value: 2.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2167549623  18 LGYKSGQIVQEFYWDEDTDDSLRAAVEDATGNELVDVDYSDVVDGVIVWWRLEDseeDDLADVLLDASANMDNGGVVWVL 97
Cdd:pfam11253   2 LGFEPGQVVQELGWDDDVDDDLREAIEDAIGSELVDEDYDEVVDVVLLWWRDDD---GDLVDALVDALTPLADGGVIWLL 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2167549623  98 TPKSGTPNHVPPEVVADAAQVAGMSATSAAMVCEDWSGMRLIA 140
Cdd:pfam11253  79 TPKAGRPGHVEPSDIAEAAPTAGLVQTSSVSVGPDWSGTRLVA 121
 
Name Accession Description Interval E-value
DUF3052 pfam11253
Protein of unknown function (DUF3052); This family of proteins with unknown function appears ...
 18-140 2.41e-47

Protein of unknown function (DUF3052); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431760  Cd Length: 123  Bit Score: 148.87  E-value: 2.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2167549623  18 LGYKSGQIVQEFYWDEDTDDSLRAAVEDATGNELVDVDYSDVVDGVIVWWRLEDseeDDLADVLLDASANMDNGGVVWVL 97
Cdd:pfam11253   2 LGFEPGQVVQELGWDDDVDDDLREAIEDAIGSELVDEDYDEVVDVVLLWWRDDD---GDLVDALVDALTPLADGGVIWLL 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2167549623  98 TPKSGTPNHVPPEVVADAAQVAGMSATSAAMVCEDWSGMRLIA 140
Cdd:pfam11253  79 TPKAGRPGHVEPSDIAEAAPTAGLVQTSSVSVGPDWSGTRLVA 121
 
Name Accession Description Interval E-value
DUF3052 pfam11253
Protein of unknown function (DUF3052); This family of proteins with unknown function appears ...
 18-140 2.41e-47

Protein of unknown function (DUF3052); This family of proteins with unknown function appears to be restricted to Actinobacteria.


Pssm-ID: 431760  Cd Length: 123  Bit Score: 148.87  E-value: 2.41e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2167549623  18 LGYKSGQIVQEFYWDEDTDDSLRAAVEDATGNELVDVDYSDVVDGVIVWWRLEDseeDDLADVLLDASANMDNGGVVWVL 97
Cdd:pfam11253   2 LGFEPGQVVQELGWDDDVDDDLREAIEDAIGSELVDEDYDEVVDVVLLWWRDDD---GDLVDALVDALTPLADGGVIWLL 78

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|...
gi 2167549623  98 TPKSGTPNHVPPEVVADAAQVAGMSATSAAMVCEDWSGMRLIA 140
Cdd:pfam11253  79 TPKAGRPGHVEPSDIAEAAPTAGLVQTSSVSVGPDWSGTRLVA 121
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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