MULTISPECIES: cytochrome c family protein [Rhodanobacter]
c-type cytochrome( domain architecture ID 10007442)
c-type cytochrome is an electron carrier protein that contains one or more heme groups
List of domain hits
Name | Accession | Description | Interval | E-value | |||
Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
206-297 | 5.74e-11 | |||
Cytochrome c2 [Energy production and conversion]; : Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 58.36 E-value: 5.74e-11
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Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
36-153 | 1.19e-05 | |||
Cytochrome c2 [Energy production and conversion]; : Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 43.33 E-value: 1.19e-05
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Name | Accession | Description | Interval | E-value | |||
Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
206-297 | 5.74e-11 | |||
Cytochrome c2 [Energy production and conversion]; Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 58.36 E-value: 5.74e-11
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thiosulf_SoxX | TIGR04485 | sulfur oxidation c-type cytochrome SoxX; Members of this family are SoxX, a c-type cytochrome ... |
216-297 | 8.27e-09 | |||
sulfur oxidation c-type cytochrome SoxX; Members of this family are SoxX, a c-type cytochrome with a CxxCH motif, part of a heterodimer with SoxA. SoxXA, SoxYZ, and SoxB contribute to thiosulfate oxidation to sulfate. Pssm-ID: 275278 [Multi-domain] Cd Length: 78 Bit Score: 51.43 E-value: 8.27e-09
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Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
207-297 | 4.10e-08 | |||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 49.84 E-value: 4.10e-08
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Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
36-153 | 1.19e-05 | |||
Cytochrome c2 [Energy production and conversion]; Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 43.33 E-value: 1.19e-05
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Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
37-156 | 1.58e-05 | |||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 42.53 E-value: 1.58e-05
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CxxCH_TIGR02603 | TIGR02603 | putative heme-binding domain, Pirellula/Verrucomicrobium type; This model represents a domain ... |
36-153 | 7.91e-05 | |||
putative heme-binding domain, Pirellula/Verrucomicrobium type; This model represents a domain limited to very few species but expanded into large paralogous families in some species that conain it. We find it in over 20 copies each in Pirellula sp. strain 1 (phylum Planctomycetes) and Verrucomicrobium spinosum DSM 4136 (phylum Verrucomicrobia), and no matches above trusted cutoff an any other species so far. This domain, about 140 amino acids long, contains an absolutely conserved motif CxxCH, the cytochrome c family heme-binding site signature (PS00190). Pssm-ID: 274224 Cd Length: 133 Bit Score: 41.58 E-value: 7.91e-05
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Name | Accession | Description | Interval | E-value | ||||
Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
206-297 | 5.74e-11 | ||||
Cytochrome c2 [Energy production and conversion]; Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 58.36 E-value: 5.74e-11
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CytC552 | COG4654 | Cytochrome c551/c552 [Energy production and conversion]; |
207-299 | 7.87e-11 | ||||
Cytochrome c551/c552 [Energy production and conversion]; Pssm-ID: 443692 [Multi-domain] Cd Length: 88 Bit Score: 57.60 E-value: 7.87e-11
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CccA | COG2010 | Cytochrome c, mono- and diheme variants [Energy production and conversion]; |
207-297 | 1.62e-10 | ||||
Cytochrome c, mono- and diheme variants [Energy production and conversion]; Pssm-ID: 441613 [Multi-domain] Cd Length: 169 Bit Score: 58.81 E-value: 1.62e-10
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thiosulf_SoxX | TIGR04485 | sulfur oxidation c-type cytochrome SoxX; Members of this family are SoxX, a c-type cytochrome ... |
216-297 | 8.27e-09 | ||||
sulfur oxidation c-type cytochrome SoxX; Members of this family are SoxX, a c-type cytochrome with a CxxCH motif, part of a heterodimer with SoxA. SoxXA, SoxYZ, and SoxB contribute to thiosulfate oxidation to sulfate. Pssm-ID: 275278 [Multi-domain] Cd Length: 78 Bit Score: 51.43 E-value: 8.27e-09
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Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
207-297 | 4.10e-08 | ||||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 49.84 E-value: 4.10e-08
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Cyc7 | COG3474 | Cytochrome c2 [Energy production and conversion]; |
36-153 | 1.19e-05 | ||||
Cytochrome c2 [Energy production and conversion]; Pssm-ID: 442697 [Multi-domain] Cd Length: 101 Bit Score: 43.33 E-value: 1.19e-05
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Cytochrom_C | pfam00034 | Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and ... |
37-156 | 1.58e-05 | ||||
Cytochrome c; The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family. Pssm-ID: 459641 [Multi-domain] Cd Length: 89 Bit Score: 42.53 E-value: 1.58e-05
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ccoP | TIGR00782 | cytochrome c oxidase, cbb3-type, subunit III; This model describes a di-heme subunit of ... |
207-297 | 2.58e-05 | ||||
cytochrome c oxidase, cbb3-type, subunit III; This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport] Pssm-ID: 129864 [Multi-domain] Cd Length: 285 Bit Score: 44.89 E-value: 2.58e-05
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NorB | COG3256 | Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]; |
2-156 | 4.97e-05 | ||||
Nitric oxide reductase large subunit [Inorganic ion transport and metabolism]; Pssm-ID: 442487 Cd Length: 738 Bit Score: 44.88 E-value: 4.97e-05
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CxxCH_TIGR02603 | TIGR02603 | putative heme-binding domain, Pirellula/Verrucomicrobium type; This model represents a domain ... |
36-153 | 7.91e-05 | ||||
putative heme-binding domain, Pirellula/Verrucomicrobium type; This model represents a domain limited to very few species but expanded into large paralogous families in some species that conain it. We find it in over 20 copies each in Pirellula sp. strain 1 (phylum Planctomycetes) and Verrucomicrobium spinosum DSM 4136 (phylum Verrucomicrobia), and no matches above trusted cutoff an any other species so far. This domain, about 140 amino acids long, contains an absolutely conserved motif CxxCH, the cytochrome c family heme-binding site signature (PS00190). Pssm-ID: 274224 Cd Length: 133 Bit Score: 41.58 E-value: 7.91e-05
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CytC552 | COG4654 | Cytochrome c551/c552 [Energy production and conversion]; |
36-87 | 1.83e-04 | ||||
Cytochrome c551/c552 [Energy production and conversion]; Pssm-ID: 443692 [Multi-domain] Cd Length: 88 Bit Score: 39.50 E-value: 1.83e-04
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Cytochrome_CBB3 | pfam13442 | Cytochrome C oxidase, cbb3-type, subunit III; |
207-294 | 2.40e-04 | ||||
Cytochrome C oxidase, cbb3-type, subunit III; Pssm-ID: 463879 [Multi-domain] Cd Length: 67 Bit Score: 38.54 E-value: 2.40e-04
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CytC553 | COG2863 | Cytochrome c553 [Energy production and conversion]; |
206-300 | 1.93e-03 | ||||
Cytochrome c553 [Energy production and conversion]; Pssm-ID: 442110 [Multi-domain] Cd Length: 98 Bit Score: 37.02 E-value: 1.93e-03
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TsdA | COG3258 | Thiosulfate dehydrogenase TsdA, contains C-terminal cytochrome c domain [Inorganic ion ... |
122-300 | 7.60e-03 | ||||
Thiosulfate dehydrogenase TsdA, contains C-terminal cytochrome c domain [Inorganic ion transport and metabolism]; Pssm-ID: 442489 [Multi-domain] Cd Length: 216 Bit Score: 37.14 E-value: 7.60e-03
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CccA | COG2010 | Cytochrome c, mono- and diheme variants [Energy production and conversion]; |
35-120 | 9.84e-03 | ||||
Cytochrome c, mono- and diheme variants [Energy production and conversion]; Pssm-ID: 441613 [Multi-domain] Cd Length: 169 Bit Score: 36.47 E-value: 9.84e-03
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Blast search parameters | ||||
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