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Conserved domains on  [gi|2185791771|ref|WP_236695240|]
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MULTISPECIES: ferric-rhodotorulic acid/ferric-coprogen receptor FhuE [Pseudomonas]

Protein Classification

TonB-dependent receptor( domain architecture ID 10659166)

TonB-dependent receptor may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds

Gene Ontology:  GO:0015267|GO:0055085
PubMed:  12409204

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
OM_channels super family cl21487
Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in ...
 114-790 0e+00

Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20), which associate as trimers. Maltoporin-like channels have specificities for various sugars and form 18 beta-stranded barrels (18,22), which associate as trimers. Ligand-gated protein channels cooperate with a TonB associated inner membrane complex to actively transport ligands via the proton motive force and they form monomeric, (22,24) barrels. The 150-200 N-terminal residues form a plug that blocks the channel from the periplasmic end.


The actual alignment was detected with superfamily member PRK10003:

Pssm-ID: 473880 [Multi-domain]  Cd Length: 729  Bit Score: 676.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 114 TTTEGTgsyttgataaatGLPLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTVFASRGFFINDLQ 193
Cdd:PRK10003   64 TTSAGT------------KMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYM 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 194 YDGISSYYKSNYAAGESELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRGEAQVSAGSWDNYRSTLDLS 273
Cdd:PRK10003  132 VDGIPTYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQ 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 274 GPLTPTGNVRGRLVGAYQDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKTHYS 353
Cdd:PRK10003  212 SPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 354 RSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIdAEPSQSRFP-------- 425
Cdd:PRK10003  292 RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVDKATGML-VGPYSNYGPgfdyvggt 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 426 ----GERKQQSTDLRLSGPFELFGRTHEAVVGATYFDHKYSFDWIGNKTPWQSPVSVYDF-GHVAEPEWdyENRELSERN 500
Cdd:PRK10003  371 gwnsGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFnGNFPQTDW--SPQSLAQDD 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 501 HTKQKAGYAALRLSLADPLKLILGGRFTQYDregagwASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYR 580
Cdd:PRK10003  449 TTHMKSLYAATRVSLADPLHLILGARYTNWR------VDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQNDR 522

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 581 DRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGqQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALS 660
Cdd:PRK10003  523 DSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVA-QSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAIT 601

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 661 ENWNAFFFATHYSAKDSDDNDVNTQLPRTMARLFTTYRLPgQWKQLTVGGGANWQSRIYYDGVGPQGQ-RQEQSDYLVAN 739
Cdd:PRK10003  602 DNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLP-VMPELTVGGGVNWQNRVYTDTVTPYGTfRAEQGSYALVD 680

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2185791771 740 LMARYDITPQISAQLNVNNLFDEKYQTAVNwyGQGVWGAPRNLMGTLSYKF 790
Cdd:PRK10003  681 LFTRYQVTKNFSVQGNVNNLFDKTYDTNVE--GSIVYGAPRNFSITATYQF 729
STN smart00965
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ...
 44-92 5.38e-07

Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.


:

Pssm-ID: 198033 [Multi-domain]  Cd Length: 52  Bit Score: 46.73  E-value: 5.38e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2185791771   44 LQVLYRPEDVAGKRSQALRGKREPSQALSELLQGTG-AAQHIEGDTATVS 92
Cdd:smart00965   1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGlTYRRIGGNTIVLS 50
 
Name Accession Description Interval E-value
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
 114-790 0e+00

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 676.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 114 TTTEGTgsyttgataaatGLPLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTVFASRGFFINDLQ 193
Cdd:PRK10003   64 TTSAGT------------KMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYM 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 194 YDGISSYYKSNYAAGESELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRGEAQVSAGSWDNYRSTLDLS 273
Cdd:PRK10003  132 VDGIPTYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQ 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 274 GPLTPTGNVRGRLVGAYQDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKTHYS 353
Cdd:PRK10003  212 SPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 354 RSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIdAEPSQSRFP-------- 425
Cdd:PRK10003  292 RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVDKATGML-VGPYSNYGPgfdyvggt 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 426 ----GERKQQSTDLRLSGPFELFGRTHEAVVGATYFDHKYSFDWIGNKTPWQSPVSVYDF-GHVAEPEWdyENRELSERN 500
Cdd:PRK10003  371 gwnsGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFnGNFPQTDW--SPQSLAQDD 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 501 HTKQKAGYAALRLSLADPLKLILGGRFTQYDregagwASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYR 580
Cdd:PRK10003  449 TTHMKSLYAATRVSLADPLHLILGARYTNWR------VDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQNDR 522

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 581 DRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGqQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALS 660
Cdd:PRK10003  523 DSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVA-QSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAIT 601

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 661 ENWNAFFFATHYSAKDSDDNDVNTQLPRTMARLFTTYRLPgQWKQLTVGGGANWQSRIYYDGVGPQGQ-RQEQSDYLVAN 739
Cdd:PRK10003  602 DNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLP-VMPELTVGGGVNWQNRVYTDTVTPYGTfRAEQGSYALVD 680

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2185791771 740 LMARYDITPQISAQLNVNNLFDEKYQTAVNwyGQGVWGAPRNLMGTLSYKF 790
Cdd:PRK10003  681 LFTRYQVTKNFSVQGNVNNLFDKTYDTNVE--GSIVYGAPRNFSITATYQF 729
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 74-790 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 672.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771  74 LLQGTGAAQHIEGDTATVSFGGDNGSLEMGATTIVSNRlatttEGTGSYTTGATAAATGLPLSTRETPQSVSVITRQRMD 153
Cdd:COG4773     4 LLAGSGLAAAAAGALAQAAAAAAAEATTLPEVTVTGTA-----EGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 154 DQNMTTLGDVLANAPGISA-PQLDSERTVFASRGFFINDLQYDGISSYYksnyaAGESELDAIIYDRIEIVRGATGLLTG 232
Cdd:COG4773    79 DQGATTLDDALRNVPGVTVsSYDGGGRDSFSIRGFSIDNYLRDGLPLGG-----FGGGQPDTANLERVEVLKGPAGLLYG 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 233 AGEPSASVNLVRKRAdSKEFRGEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGAYQDKKNFFDRYSREGHVIYGVVD 312
Cdd:COG4773   154 AGSPGGLVNLVTKRP-TAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLD 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 313 VDLTDATTLSLGASYQKSDADGlTYGGVPLwnsDGSKTHYSRSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMH 392
Cdd:COG4773   233 WDLTDDTTLTLGAEYQDDDSTG-DRGFLPL---DGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARY 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 393 NRNEVDNARIFNWGFPDPETGLIDAEPSQSRfpGERKQQSTDLRLSGPFELFGRTHEAVVGATYFDHKYSFDWIGNktpw 472
Cdd:COG4773   309 SDSDRDGRSAYAYGAPDAATGTLTRYASARD--GDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATA---- 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 473 qSPVSVYD--FGHVAEPEWDYENRelseRNHTKQKAGYAALRLSLADPLKLILGGRFTQYDREGAGWASSGEYDYSDHKF 550
Cdd:COG4773   383 -GTINIYNpvYGNLPEPDFDASDT----DTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAF 457

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 551 IPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGQQDvgys 630
Cdd:COG4773   458 TPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTD---- 533

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 631 vPGNPDspAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVN-----TQLPRTMARLFTTYRLP-GQWK 704
Cdd:COG4773   534 -PDNPN--FYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADALegkrlTNVPRHTASLWTTYRFPsGALK 610

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 705 QLTVGGGANWQSRIYYDGVGpqgqRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEKYQTAVNWYGQGVWGAPRNLMG 784
Cdd:COG4773   611 GLGLGGGVRYVGERYGDAAN----TFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRL 686


                  ....*.
gi 2185791771 785 TLSYKF 790
Cdd:COG4773   687 SLSYKF 692
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 139-790 2.28e-117

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 369.05  E-value: 2.28e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 139 ETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAP--QLDSERTVFASRGF----FINDLQYDGISSYYKSNYAAgeseL 212
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgsGGTTQFGNITIRGFglevDIDNVYLDGVPLLSRGNLAI----V 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 213 DAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSkEFRGEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGAYQD 292
Cdd:TIGR01783  77 DPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQD-EPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQD 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 293 KKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLtYGGVPLWNSDGSKThYSRSF--SIAPKWNTEEVEVK 370
Cdd:TIGR01783 156 GDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGG-YGGLPASGGTSGRD-LSSDRylGTSSNRNYDDREYL 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 371 NFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGlidAEPSQSRFPGERKQQSTDLRLSGPFELFGRTHEA 450
Cdd:TIGR01783 234 SYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGL---FGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDL 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 451 VVGATYFdhKYSFDWIGNKTPWQSPVSVYDFGHVAEPEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFTQY 530
Cdd:TIGR01783 311 LLGVSYG--QRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALNGVALQRILLADKWTLTLGGRYDSV 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 531 DREGAGWASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW----LDPVTGDAYEAGIKGEFlDG 606
Cdd:TIGR01783 389 DVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNsgdiLEPEKGKNYELGVRYDL-GD 467

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 607 RLNASLAAFRIVQDNLGQQDvgysvpgNPDSPAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVNTQ- 685
Cdd:TIGR01783 468 SLLATAALFRITKDNQLVQD-------PVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQg 540

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 686 -----LPRTMARLFTTYRLPGQWKQLTVGGGANWQSRIYYDGvgpqGQRQEQSDYLVANLMARYDITPQ--ISAQLNVNN 758
Cdd:TIGR01783 541 ntvpfVPKHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDG----GNTGKVPSYTVVDLSVRYDLTKKknLTLALNVNN 616

                         650       660       670
                  ....*....|....*....|....*....|....*
gi 2185791771 759 LFDEKYQTAVNWYGQGV---WGAPRNLMGTLSYKF 790
Cdd:TIGR01783 617 LFDRDYYTSGYRWGPSAyiyPGAPRTVGLSVSYDF 651
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 143-790 5.43e-107

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 341.35  E-value: 5.43e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 143 SVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDS-ERTVFASRGFFIN--DLQYDGISSY-YKSNYAAGESELDAIIYD 218
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGgGGSTISIRGFGPDrtLVLVDGLPLAsSNYGRGVDLNTIPPELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 219 RIEIVRGATGLLTGAGEPSASVNLVRKRAdSKEFRGEAQVSAGSW---DNYRSTLDLSGPLTPTGNVRGRLVGAYQDKKN 295
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRP-TDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 296 FF------DRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKTHYSRSFSIAPKWNTEEVEV 369
Cdd:cd01347   160 TIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYR 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 370 KNFFANLEHRF-DNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSQSRFpgERKQQSTDLRLSGPFELFGRTH 448
Cdd:cd01347   240 KRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSER--DTTQLGFDAGLNAPFGTGPVAH 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 449 EAVVGATYFdhkysfdwignktpwqspvsvydfghvaepewdyenrelSERNHTKQKAGYAALRLSLADPLKLILGGRFT 528
Cdd:cd01347   318 TLTLGVEYR---------------------------------------REELDEKQTALYAQDTIELTDDLTLTLGLRYD 358

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 529 QYDREGAGWASSGEY-DYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW------------LDPVTGDAY 595
Cdd:cd01347   359 HYDQDSKDTIAGGTTaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGshggtaavgnpnLKPEKSKQY 438

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 596 EAGIKGEFlDGRLNASLAAFRIVQDNLGQQDvgYSVPGNPDSPAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAK 675
Cdd:cd01347   439 ELGLKYDP-GDGLTLSAALFRIDIKNEIVST--PTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 676 -----DSDDNDVNTQLPRTMARLFTTYRLPgqWKQLTVGGGANWQSRiYYDGVGPQGQRQEQSDYLVANLMARYDITPQI 750
Cdd:cd01347   516 vkrtdGATTGNRLPGIPKHTANLGLDYELP--DEGLTAGGGVRYRGK-QYADTANGNNTVKVPGYTLVDLSASYQFTKNL 592

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|...
gi 2185791771 751 SAQLNVNNLFDEKYQTAVNWYG---QGVWGAPRNLMGTLSYKF 790
Cdd:cd01347   593 TLRLGVNNLFDKDYYTSLSVRGsglYGYYGPGRTYYLSVSYKF 635
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 308-789 1.41e-45

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 170.34  E-value: 1.41e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 308 YGVVDVDLTDATTLSLGASYQKSDADgltYGGVPLWNSDGSKTHYSRSFSIAPKWNTEEVEVKNFFANLEHRFDND--WL 385
Cdd:pfam00593   2 WQLSLDLLGDDTLLTLGYDYSRYTDG---LDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGlsWL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 386 AQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSqsrfpgeRKQQSTDLRLSGPFELfgrTHEAVVGATYFDHKYSFDw 465
Cdd:pfam00593  79 STLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRL-------YGLYGLDGDLELSLDL---SHDLLLGVELRTAGLDYR- 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 466 ignktpwqspvsVYDFGHVAEPEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFTQYDREGAGWASSGE-YD 544
Cdd:pfam00593 148 ------------RLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDnFS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 545 YSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW--------------LDPVTGDAYEAGIKgeFLDGRLNA 610
Cdd:pfam00593 216 RSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGsgggggavaggnpdLKPETSDNYELGLK--YDDGRLSL 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 611 SLAAFRIVQDNLgQQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALsenWNAFFFATHYSAKDSDDNDVNT------ 684
Cdd:pfam00593 294 SLALFYIDIKNL-ITSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRL---WGLGLSGGGYTYTDADDDADADdtgnpl 369

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 685 -QLPRTMARLFTTYRLPGQwkQLTVGGGANWQSRiYYDGVGPQGQRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEK 763
Cdd:pfam00593 370 pNVPRHTANLGLTYDFPLG--GWGARLGARYVGS-GERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKY 446

                         490       500
                  ....*....|....*....|....*....
gi 2185791771 764 YQTAV---NWYGQGVWGAPRNLMGTLSYK 789
Cdd:pfam00593 447 YKRYYssgGGNLGGYPGPGRTFYLGLSYK 475
STN smart00965
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ...
 44-92 5.38e-07

Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.


Pssm-ID: 198033 [Multi-domain]  Cd Length: 52  Bit Score: 46.73  E-value: 5.38e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2185791771   44 LQVLYRPEDVAGKRSQALRGKREPSQALSELLQGTG-AAQHIEGDTATVS 92
Cdd:smart00965   1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGlTYRRIGGNTIVLS 50
STN pfam07660
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ...
 45-92 1.37e-05

Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.


Pssm-ID: 429580 [Multi-domain]  Cd Length: 51  Bit Score: 42.89  E-value: 1.37e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2185791771  45 QVLYRPEDVAGKRSQALRGKREP-SQALSELLQGTGAAQHIEGDTATVS 92
Cdd:pfam07660   1 SILYDSDLVDGKQSVSLNVGNVTlEEALDQLLAGTGLSYEIGGNTIVLR 49
 
Name Accession Description Interval E-value
PRK10003 PRK10003
ferric-rhodotorulic acid outer membrane transporter; Provisional
 114-790 0e+00

ferric-rhodotorulic acid outer membrane transporter; Provisional


Pssm-ID: 236640 [Multi-domain]  Cd Length: 729  Bit Score: 676.20  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 114 TTTEGTgsyttgataaatGLPLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTVFASRGFFINDLQ 193
Cdd:PRK10003   64 TTSAGT------------KMQMTQRDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGFQIDNYM 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 194 YDGISSYYKSNYAAGESELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRGEAQVSAGSWDNYRSTLDLS 273
Cdd:PRK10003  132 VDGIPTYFESRWNLGDALSDTALFERVEVVRGATGLMTGTGNPSAAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQ 211

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 274 GPLTPTGNVRGRLVGAYQDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKTHYS 353
Cdd:PRK10003  212 SPLTEDGKVRARIVAGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWGGLPRWNTDGSSNSYD 291

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 354 RSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIdAEPSQSRFP-------- 425
Cdd:PRK10003  292 RARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVEFDSKMMYVDAYVDKATGML-VGPYSNYGPgfdyvggt 370

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 426 ----GERKQQSTDLRLSGPFELFGRTHEAVVGATYFDHKYSFDWIGNKTPWQSPVSVYDF-GHVAEPEWdyENRELSERN 500
Cdd:PRK10003  371 gwnsGKRKVDALDLFADGSYELFGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFnGNFPQTDW--SPQSLAQDD 448

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 501 HTKQKAGYAALRLSLADPLKLILGGRFTQYDregagwASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYR 580
Cdd:PRK10003  449 TTHMKSLYAATRVSLADPLHLILGARYTNWR------VDTLTYSMEKNHTTPYAGLVYDINDNWSTYASYTSIFQPQNDR 522

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 581 DRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGqQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALS 660
Cdd:PRK10003  523 DSSGKYLAPITGNNYELGLKSDWMNSRLTTTLAIFRIEQDNVA-QSTGTPIPGSNGETAYKAVDGTVSKGVEFELNGAIT 601

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 661 ENWNAFFFATHYSAKDSDDNDVNTQLPRTMARLFTTYRLPgQWKQLTVGGGANWQSRIYYDGVGPQGQ-RQEQSDYLVAN 739
Cdd:PRK10003  602 DNWQLTFGATRYIAEDNEGNAVNPNLPRTTVKLFTRYRLP-VMPELTVGGGVNWQNRVYTDTVTPYGTfRAEQGSYALVD 680

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2185791771 740 LMARYDITPQISAQLNVNNLFDEKYQTAVNwyGQGVWGAPRNLMGTLSYKF 790
Cdd:PRK10003  681 LFTRYQVTKNFSVQGNVNNLFDKTYDTNVE--GSIVYGAPRNFSITATYQF 729
FhuE COG4773
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ...
 74-790 0e+00

Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];


Pssm-ID: 443805 [Multi-domain]  Cd Length: 692  Bit Score: 672.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771  74 LLQGTGAAQHIEGDTATVSFGGDNGSLEMGATTIVSNRlatttEGTGSYTTGATAAATGLPLSTRETPQSVSVITRQRMD 153
Cdd:COG4773     4 LLAGSGLAAAAAGALAQAAAAAAAEATTLPEVTVTGTA-----EGTGGYTAKSSSTATKLDTPLRETPQSVSVVTRQLIE 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 154 DQNMTTLGDVLANAPGISA-PQLDSERTVFASRGFFINDLQYDGISSYYksnyaAGESELDAIIYDRIEIVRGATGLLTG 232
Cdd:COG4773    79 DQGATTLDDALRNVPGVTVsSYDGGGRDSFSIRGFSIDNYLRDGLPLGG-----FGGGQPDTANLERVEVLKGPAGLLYG 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 233 AGEPSASVNLVRKRAdSKEFRGEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGAYQDKKNFFDRYSREGHVIYGVVD 312
Cdd:COG4773   154 AGSPGGLVNLVTKRP-TAEPQGEVSLSAGSWDTYRATADVGGPLNEDGTLRYRLNAAYEDGDSFRDGVDNRRTLIAPSLD 232

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 313 VDLTDATTLSLGASYQKSDADGlTYGGVPLwnsDGSKTHYSRSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMH 392
Cdd:COG4773   233 WDLTDDTTLTLGAEYQDDDSTG-DRGFLPL---DGTLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANARY 308

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 393 NRNEVDNARIFNWGFPDPETGLIDAEPSQSRfpGERKQQSTDLRLSGPFELFGRTHEAVVGATYFDHKYSFDWIGNktpw 472
Cdd:COG4773   309 SDSDRDGRSAYAYGAPDAATGTLTRYASARD--GDSRSDSLDANLNGKFETGGLEHTLLVGADYSRYDSDSDSATA---- 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 473 qSPVSVYD--FGHVAEPEWDYENRelseRNHTKQKAGYAALRLSLADPLKLILGGRFTQYDREGAGWASSGEYDYSDHKF 550
Cdd:COG4773   383 -GTINIYNpvYGNLPEPDFDASDT----DTTTRQTGLYAQDQISLTDRLSLLLGGRYDWYETDSTNRLGGSTTSYDDSAF 457

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 551 IPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGQQDvgys 630
Cdd:COG4773   458 TPRAGLVYDLTPGLSLYASYSESFEPQSGADNNGNPLDPETGKQYEAGVKGELFDGRLNATLAVFDITQKNVATTD---- 533

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 631 vPGNPDspAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVN-----TQLPRTMARLFTTYRLP-GQWK 704
Cdd:COG4773   534 -PDNPN--FYVQVGEVRSRGVELELSGELTPGLNLIAGYTYTDAKITKDADALegkrlTNVPRHTASLWTTYRFPsGALK 610

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 705 QLTVGGGANWQSRIYYDGVGpqgqRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEKYQTAVNWYGQGVWGAPRNLMG 784
Cdd:COG4773   611 GLGLGGGVRYVGERYGDAAN----TFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYASSGSRGYVYYGAPRNVRL 686


                  ....*.
gi 2185791771 785 TLSYKF 790
Cdd:COG4773   687 SLSYKF 692
Fiu COG4774
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
133-790 1.12e-137

Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];


Pssm-ID: 443806 [Multi-domain]  Cd Length: 639  Bit Score: 421.21  E-value: 1.12e-137
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 133 LPLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISA-PQLDSERTVFASRGF-FINDLQYDGIssyyksnYAAGES 210
Cdd:COG4774     2 TDTPLLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFgAGEGGNGDSFSIRGFsASGDIYVDGL-------RDPGQY 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 211 ELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRgEAQVSAGSWDNYRSTLDLSGPLTPtgNVRGRLVGAY 290
Cdd:COG4774    75 RRDTFNLERVEVLKGPASVLYGRGSPGGVINLVTKRPTDEPFT-EVTLTYGSDGQRRATLDVNGPLGD--DLAYRLNGMY 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 291 QDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDadGLTYGGVPlWNSDGSKTHYSRSFSIAPKWNTEEVEVK 370
Cdd:COG4774   152 RDSDSYRDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDD--RTPDYGVP-AVANGRPVDVDRSTFYGQPDDYSDSETD 228

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 371 NFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDpeTGLIDAepSQSRFPGERKQQSTDLRLSGPFELFGRTHEA 450
Cdd:COG4774   229 SATLRLEHDFNDNWTLRNALRYSDYDRDYRNTYPTGGNA--TGTVTR--SAYRRDQDNDTLSNQTDLTGKFDTGGVKHTL 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 451 VVGATYFDHKYSFDWIGNKTPWqSPVSVYDFGHVAePEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFTQY 530
Cdd:COG4774   305 LAGVEYSREDSDNARYSGGGTA-PTVNLYNPVYGA-PVTGPTLGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRF 382

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 531 DREGAGWASSG-EYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFN---FQDYRDRNGAWLDPVTGDAYEAGIKGEFLDG 606
Cdd:COG4774   383 DTDYTDRTTGAtTSSYDDSAFSPRAGLVYKPTPNLSLYASYSTSFNpggGAPSLSNAGQALDPEKSRQYEVGVKWDLLDG 462

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 607 RLNASLAAFRIVQDNLGQQDvgysvpgnPDSPAYYATDGAT-SKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVNTQ 685
Cdd:COG4774   463 RLSLTAALFRIEKTNVRTTD--------PANPGVYVQTGEQrSRGVELEATGELTPGWSVLAGYTYLDAEITKSANAANV 534

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 686 ------LPRTMARLFTTYRLPgqWKQLTVGGGANWQSRIYYDgvgpQGQRQEQSDYLVANLMARYDITPQISAQLNVNNL 759
Cdd:COG4774   535 gnrlpnVPRHSASLWTTYDLP--LPGLTLGGGVRYVGSRYAD----AANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNL 608

                         650       660       670
                  ....*....|....*....|....*....|.
gi 2185791771 760 FDEKYQTAVNWYGQGVWGAPRNLMGTLSYKF 790
Cdd:COG4774   609 TDKRYYASAYGSGYVTPGAPRTVLLSASYRF 639
TonB-siderophor TIGR01783
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
 139-790 2.28e-117

TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273805 [Multi-domain]  Cd Length: 651  Bit Score: 369.05  E-value: 2.28e-117
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 139 ETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAP--QLDSERTVFASRGF----FINDLQYDGISSYYKSNYAAgeseL 212
Cdd:TIGR01783   1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVVGgsGGTTQFGNITIRGFglevDIDNVYLDGVPLLSRGNLAI----V 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 213 DAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSkEFRGEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGAYQD 292
Cdd:TIGR01783  77 DPAMVERVEVLRGPASLLYGGSAPGGVINIVTKRPQD-EPKGSVTFGAGTRSGYRTAFDLGGPLGADGTFRGRLNGARQD 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 293 KKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLtYGGVPLWNSDGSKThYSRSF--SIAPKWNTEEVEVK 370
Cdd:TIGR01783 156 GDSFYDGAGEETRLGATATDWQLDDRTLLRLGAYYQKERDRGG-YGGLPASGGTSGRD-LSSDRylGTSSNRNYDDREYL 233

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 371 NFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGlidAEPSQSRFPGERKQQSTDLRLSGPFELFGRTHEA 450
Cdd:TIGR01783 234 SYGLSLEYQFNDVWTGKQNLRYSYFDTDSNQVQASGYSSDGGL---FGRSLTVVNVKQDRVQIDAGLDGEFETGPIEHDL 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 451 VVGATYFdhKYSFDWIGNKTPWQSPVSVYDFGHVAEPEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFTQY 530
Cdd:TIGR01783 311 LLGVSYG--QRTTNRFNNTGYPSDNIYSLTATSSARTDIGDSPKDRALSSTTKALNGVALQRILLADKWTLTLGGRYDSV 388

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 531 DREGAGWASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW----LDPVTGDAYEAGIKGEFlDG 606
Cdd:TIGR01783 389 DVKSNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYASYAESFKPGGYYPKGAGNsgdiLEPEKGKNYELGVRYDL-GD 467

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 607 RLNASLAAFRIVQDNLGQQDvgysvpgNPDSPAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVNTQ- 685
Cdd:TIGR01783 468 SLLATAALFRITKDNQLVQD-------PVNGTFSVNAGKTRNRGVELEARGYLTPGLSLSAGYTYTDAEFTEDTNGDTQg 540

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 686 -----LPRTMARLFTTYRLPGQWKQLTVGGGANWQSRIYYDGvgpqGQRQEQSDYLVANLMARYDITPQ--ISAQLNVNN 758
Cdd:TIGR01783 541 ntvpfVPKHTASLWASYAPPVGDNGLTLGGGVQYTGKAYVDG----GNTGKVPSYTVVDLSVRYDLTKKknLTLALNVNN 616

                         650       660       670
                  ....*....|....*....|....*....|....*
gi 2185791771 759 LFDEKYQTAVNWYGQGV---WGAPRNLMGTLSYKF 790
Cdd:TIGR01783 617 LFDRDYYTSGYRWGPSAyiyPGAPRTVGLSVSYDF 651
ligand_gated_channel cd01347
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
 143-790 5.43e-107

TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.


Pssm-ID: 238657 [Multi-domain]  Cd Length: 635  Bit Score: 341.35  E-value: 5.43e-107
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 143 SVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDS-ERTVFASRGFFIN--DLQYDGISSY-YKSNYAAGESELDAIIYD 218
Cdd:cd01347     1 SVSVITAEDIEKQPATSLADLLRRIPGVSVTRGGGgGGSTISIRGFGPDrtLVLVDGLPLAsSNYGRGVDLNTIPPELIE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 219 RIEIVRGATGLLTGAGEPSASVNLVRKRAdSKEFRGEAQVSAGSW---DNYRSTLDLSGPLTPTGNVRGRLVGAYQDKKN 295
Cdd:cd01347    81 RVEVLKGPSSALYGSGAIGGVVNIITKRP-TDEFGGSVTAGYGSDnsgSSGGGGFDVSGALADDGAFGARLYGAYRDGDG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 296 FF------DRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKTHYSRSFSIAPKWNTEEVEV 369
Cdd:cd01347   160 TIdgdgqaDDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGGTLPANGTGSSLGGGPSSNTNGDRDWDYRDRYR 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 370 KNFFANLEHRF-DNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSQSRFpgERKQQSTDLRLSGPFELFGRTH 448
Cdd:cd01347   240 KRASLGLEHDLnDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSER--DTTQLGFDAGLNAPFGTGPVAH 317

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 449 EAVVGATYFdhkysfdwignktpwqspvsvydfghvaepewdyenrelSERNHTKQKAGYAALRLSLADPLKLILGGRFT 528
Cdd:cd01347   318 TLTLGVEYR---------------------------------------REELDEKQTALYAQDTIELTDDLTLTLGLRYD 358

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 529 QYDREGAGWASSGEY-DYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW------------LDPVTGDAY 595
Cdd:cd01347   359 HYDQDSKDTIAGGTTaKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGshggtaavgnpnLKPEKSKQY 438

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 596 EAGIKGEFlDGRLNASLAAFRIVQDNLGQQDvgYSVPGNPDSPAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAK 675
Cdd:cd01347   439 ELGLKYDP-GDGLTLSAALFRIDIKNEIVST--PTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTE 515

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 676 -----DSDDNDVNTQLPRTMARLFTTYRLPgqWKQLTVGGGANWQSRiYYDGVGPQGQRQEQSDYLVANLMARYDITPQI 750
Cdd:cd01347   516 vkrtdGATTGNRLPGIPKHTANLGLDYELP--DEGLTAGGGVRYRGK-QYADTANGNNTVKVPGYTLVDLSASYQFTKNL 592

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|...
gi 2185791771 751 SAQLNVNNLFDEKYQTAVNWYG---QGVWGAPRNLMGTLSYKF 790
Cdd:cd01347   593 TLRLGVNNLFDKDYYTSLSVRGsglYGYYGPGRTYYLSVSYKF 635
CirA COG1629
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
136-775 9.91e-85

Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];


Pssm-ID: 441236 [Multi-domain]  Cd Length: 644  Bit Score: 282.49  E-value: 9.91e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 136 STRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTVFASRGF--FINDLQY--DGISSYYKSNYAAGESE 211
Cdd:COG1629    14 SLQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFggGGNRVLVlvDGVPLNDPSGGDGGLSY 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 212 LDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSkEFRGEAQVSAGSWDNYRSTLDLSGpltPTGNVRGRLVGAYQ 291
Cdd:COG1629    94 IDPEDIERVEVLRGPSSALYGSGALGGVINIVTKKPKD-GKGGEVSASYGSYGTYRASLSLSG---GNGKLAYRLSASYR 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 292 DKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYggvpLWNSDGSKTHYSRSFSIAPKWNTEEVEVKN 371
Cdd:COG1629   170 DSDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPGY----LTLAALRPRGAMDDGTNPYSNDTDDNTRDR 245

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 372 FFANLEHRFDNDWL---AQFRVMHNRNEVDNARifnwgfpdpeTGLIDAEPSQSRFPGERKQQSTDLRLSGPFElFGRTH 448
Cdd:COG1629   246 YSLSLEYEHLGDGLklsASAYYRYDDTDLDSDF----------TPTPADGGTLEQTDFDNRTYGLELRLTYDLG-FGGKH 314

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 449 EAVVGATYFDHKYSFDWIGNKtpwqspvsvydfghVAEPEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFT 528
Cdd:COG1629   315 TLLVGLDYQRQDLDGSGYPLD--------------LGSGSLPTLTSGADDDGTTTSLALYAQDTYKLTDKLTLTAGLRYD 380

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 529 QYDREGAGW---ASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW----------LDPVTGDAY 595
Cdd:COG1629   381 YVSYDVDDTvtgTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGELYANGtdpysvgnpdLKPETSTNY 460

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 596 EAGIKGEFLDGRLNASLAAFRIVQDNLgqqDVGYSVPGNPDSPAYYA-TDGATSKGVEFELSGALSENWNAFFFATHYSA 674
Cdd:COG1629   461 ELGLRYRLLDGRLSLSLALFYSDVDNE---ILSVPLPNDSGFSTYYTnAGKARSYGVELELSYQLTPGLSLNASYSYTDA 537

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 675 KDSDDNDVNTQL--------PRTMARLFTTYRLPGQWkqlTVGGGANWQSRIYYDGVGPQGQRqeqSDYLVANLMARYDI 746
Cdd:COG1629   538 KFDDDTDGSADLdgnrlpgvPPLTANLGLTYEFPGGW---SLGLGVRYVGDRYLDDANTQGAP---GGYTLVDLGAGYRF 611

                         650       660
                  ....*....|....*....|....*....
gi 2185791771 747 TPQISAQLNVNNLFDEKYQTAVNWYGQGV 775
Cdd:COG1629   612 GDNLTLSLGVDNLFDKKYATSLSVRASNV 640
FecA COG4772
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
138-790 1.73e-52

Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];


Pssm-ID: 443804 [Multi-domain]  Cd Length: 681  Bit Score: 194.38  E-value: 1.73e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 138 RETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLD--SERTVFASRGF------FINDLQyDGISSYYkSNYAAGE 209
Cdd:COG4772    39 KDVPGSVSVVDREELENQAATSLREVLRRVPGVNVQEEDgfGLRPNIGIRGLgprrsrGITLLE-DGIPIAP-APYGDPA 116

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 210 SELDAII--YDRIEIVRGATGLLTGagePSAS---VNLVRKRADsKEFRGEAQVSAGSWDNYRSTLDLSGPltpTGNVRG 284
Cdd:COG4772   117 AYYFPDLerMERIEVLRGAAALRYG---PQTVggaINFVTRTIP-TAFGGELRVTGGSFGYRRTHASVGGT---VGNFGY 189

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 285 RLVGAYQDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADglTYGGVPL--WNSDgskthysRSFSIAPKw 362
Cdd:COG4772   190 LVEYSRKRGDGFRDNSGFDINDFNAKLGYRLSDRQELTLKFQYYDEDAN--TPGGLTDaqFDAD-------PRQSYRPA- 259

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 363 NTEEVEVKNFFANLEHRFDNDWlaQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSqsrfPGERKQQSTDLRLSGPFE 442
Cdd:COG4772   260 DQFDTRRTQLSLRYEHQLSDNT--TLTTTAYYNDFSRNWYIRQNTADPNTPGLGLRGN----PRGYRSYGIEPRLTHRFE 333

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 443 LFGRTHEAVVGATYfdHKYSFDWignktpwQSPVSVYDFGHVAEPEWDyenrelSERNHTKQKAGYAALRLSLADPLKLI 522
Cdd:COG4772   334 LGGVPHTLEVGLRY--HREEEDR-------KQYVNTYGQGRSGAGLRR------DRRFSADALAAYAQNRFELTGRLTLT 398

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 523 LGGRFTQYDREGAGWASSG-----EYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIF---NFQDYRDRNGAW--LDPVTG 592
Cdd:COG4772   399 PGLRYEHIRRDRTDRYSTRtggddSGSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFeppTFGDLAYGNGGNpdLKPEKS 478

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 593 DAYEAGIKGEfLDGRLNASLAAFRIVQDNlgQQDVGYSVPGNPDSpaYYATDGATSKGVEFELSGALSE----NWNAFFF 668
Cdd:COG4772   479 WNYELGTRGR-IGNGLSAEVALFYIDYDN--ELGSCSAAGGDRST--FTNAGETRHQGLELALDYDLLKggglGLPLFAA 553

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 669 ATHYSAKDSDDNDVNTQ------LPRTMARLFTTYRlpgqWKQLTVGGGANWQSRIYYDG--VGPQGQRQEQSDYLVANL 740
Cdd:COG4772   554 YTYTDAEFTSDFGPVFAgnrlpyVPRHQLTAGLGYE----HGGWTANLNGRYVSEQFTDAanTVADGSFGKIPSYTVLDL 629

                         650       660       670       680       690
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2185791771 741 MARYDITPQISAQLNVNNLFDEKYQTAVN-WYGQGVW-GAPRNLMGTLSYKF 790
Cdd:COG4772   630 SASYDFGKNLSLFAGVNNLFDKRYIASRApNYAAGIRpGPPRTVYAGLRLKF 681
FepA COG4771
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
 134-751 4.14e-50

Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];


Pssm-ID: 443803 [Multi-domain]  Cd Length: 612  Bit Score: 186.22  E-value: 4.14e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 134 PLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTV--FASRGFFINDLQY--DGISSYYKSNYAAGE 209
Cdd:COG4771    38 EQSLSDAPASVSVITAEEIEKLGATDLADALRLLPGVSVTRSGGRGGSsgISIRGLGGDRVLVliDGVPVNNPALGGGGD 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 210 -SELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRAdSKEFRGEAQVSAGSWDN--YRSTLDLSGpltPTGNVRGRL 286
Cdd:COG4771   118 lSYIPPDDIERIEVIRGPASALYGSDAIGGVINIITKKP-TDELEGSVSLGYGSNGNgtYSGSLSLGG---PGDKLSFLL 193

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 287 VGAYQDKKNFFD--------RYSREGHVIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNSDGSKThysrsfsi 358
Cdd:COG4771   194 SGSYRDRDGYLDyrnggfvgNSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAG-------- 265

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 359 apkWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNwgfpdpetglidaePSQSRFPGERKQQSTDLRLS 438
Cdd:COG4771   266 ---DRDTTTDRGNYSLRYNGDLGDNLDLSLYYSRTDRDSTNGSLGG--------------STGSFSDSDDTTYGLELDLT 328

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 439 GPfelFGRTHEAVVGATYFDHKYsfdwignktpwqspvsvydfghvaepewDYENRELSERNHTKQKAGYAALRLSLADP 518
Cdd:COG4771   329 YP---LGGNHTLTLGAEYRYDDL----------------------------DSSSFLGGADASRDTYGLFAQDEWKLTDK 377

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 519 LKLILGGRFTQYDREGAGwassgeydySDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW------------ 586
Cdd:COG4771   378 LTLTAGLRYDYYSTFGAS---------NYTAFSPRLGLRYDLSDNLTLRASYGRGFRAPSLAELYGSGtgtpgryvlgnp 448

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 587 -LDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLgqQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALSENWNA 665
Cdd:COG4771   449 dLKPETSDNYELGLEYRLGNGGLSLSLTGFYTDIKDL--IVLVPVGPGPGDVLQYENVGKARTYGLELELKYRLGKGLTL 526

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 666 FFFATHYSAKDSDDNDVN--TQLPRTMARLFTTYRLPGQWkqlTVGGGANWQSRIYYDGVGPQgQRQEQSDYLVANLMAR 743
Cdd:COG4771   527 TASYTYLDSKIDDGDTGEplPNVPPHKANLGLDYRLPKWW---LLLLLTRYYGGRYVTPPSGR-LEGYTPGYTLLDLRAS 602


                  ....*...
gi 2185791771 744 YDITPQIS 751
Cdd:COG4771   603 YKLTKNLT 610
TonB_dep_Rec pfam00593
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
 308-789 1.41e-45

TonB dependent receptor; This model now only covers the conserved part of the barrel structure.


Pssm-ID: 395474 [Multi-domain]  Cd Length: 475  Bit Score: 170.34  E-value: 1.41e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 308 YGVVDVDLTDATTLSLGASYQKSDADgltYGGVPLWNSDGSKTHYSRSFSIAPKWNTEEVEVKNFFANLEHRFDND--WL 385
Cdd:pfam00593   2 WQLSLDLLGDDTLLTLGYDYSRYTDG---LDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGlsWL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 386 AQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSqsrfpgeRKQQSTDLRLSGPFELfgrTHEAVVGATYFDHKYSFDw 465
Cdd:pfam00593  79 STLRLGLRYSSLDGDYTSNSSGLSGAGDYLSDDRL-------YGLYGLDGDLELSLDL---SHDLLLGVELRTAGLDYR- 147

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 466 ignktpwqspvsVYDFGHVAEPEWDYENRELSERNHTKQKAGYAALRLSLADPLKLILGGRFTQYDREGAGWASSGE-YD 544
Cdd:pfam00593 148 ------------RLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDGDDGNGGGDnFS 215

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 545 YSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW--------------LDPVTGDAYEAGIKgeFLDGRLNA 610
Cdd:pfam00593 216 RSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGsgggggavaggnpdLKPETSDNYELGLK--YDDGRLSL 293

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 611 SLAAFRIVQDNLgQQDVGYSVPGNPDSPAYYATDGATSKGVEFELSGALsenWNAFFFATHYSAKDSDDNDVNT------ 684
Cdd:pfam00593 294 SLALFYIDIKNL-ITSDPDGPGLGGTVYTYTNVGKARIRGVELELSGRL---WGLGLSGGGYTYTDADDDADADdtgnpl 369

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 685 -QLPRTMARLFTTYRLPGQwkQLTVGGGANWQSRiYYDGVGPQGQRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEK 763
Cdd:pfam00593 370 pNVPRHTANLGLTYDFPLG--GWGARLGARYVGS-GERRYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKY 446

                         490       500
                  ....*....|....*....|....*....
gi 2185791771 764 YQTAV---NWYGQGVWGAPRNLMGTLSYK 789
Cdd:pfam00593 447 YKRYYssgGGNLGGYPGPGRTFYLGLSYK 475
PRK14050 PRK14050
TonB-dependent siderophore receptor;
74-764 3.05e-43

TonB-dependent siderophore receptor;


Pssm-ID: 237595 [Multi-domain]  Cd Length: 728  Bit Score: 167.67  E-value: 3.05e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771  74 LLQGTGAAQHIEG---DTATVSFGGDNGSlemGATTIVSNRLATTTeGTGSYTTgataaatglpLSTRETPQSVSVITRQ 150
Cdd:PRK14050   24 VLSGLVAAQEGNTtqlETIVVEGGNAASA---TATGPVDGYVAKAT-ATGSKTD----------TPITEIPQSVSVVGRQ 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 151 RMDDQNMTT-LGDVLANAPGI-SAP-QLDSERTVFASRGFfiNDLQY----DGISSYyksNYAAGESELDAIIYDRIEIV 223
Cdd:PRK14050   90 EMDDRGVTNkVDEALRYTPGVlSQPfGTDGDTDWFYIRGF--DATQTgvflDGLNLF---SYGFGGFQIDPFMLERVEVL 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 224 RGATGLLTGAGEPSASVNLVRKRADSKEFRgEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGAYQDKKNFFDrYSRE 303
Cdd:PRK14050  165 KGPASVLYGGSNPGGIVNMVSKRPLDEPLY-YTEIGINSYGNAFTGFDVGDKLSDDGTVRYRVTGKVAGGDNYSD-YSED 242

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 304 GH-VIYGVVDVDLTDATTLSLGASYQKSDADGLTYGGVPLWNS--DGSKTHYSR-SFSIAPKWNTEEVEVKNFFANLEHR 379
Cdd:PRK14050  243 LRgFIMPQITYAPDDATSLTVYGYLSGLDQVHVGNGFLPYVGTvvDAPFGKIDRdAFYGEPDIDNGSYAQQMLGYEFSHE 322

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 380 FDNDWLAQFRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSQ---SRFPGERKQQ----STDLRLSGPFELFGRTHEAVV 452
Cdd:PRK14050  323 FDNGWTFSQNARYGHLHKHEKGPYTYGYVGGATGLPDPTGPDymlNRIGFEHRSKvdsfSIDNRLEGEFDTGALTHNLLF 402

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 453 GATYfdHKYSFDWIGnKTPWQSPVSVYD--FGHVAEPEWDYENRELSErnhtKQKAGYAALRLSLADPLKLILGGRFTQY 530
Cdd:PRK14050  403 GLDY--KYYRLDQVQ-ACCGATPISATNpvYGTTQGANFVYLDQILTQ----QQIGIYAQDQIRFGDGWLVTLNGRYDYV 475

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 531 DREGAGWASSgEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAWLDPVTGDAYEAGIKGE--FLDGRL 608
Cdd:PRK14050  476 DTDSDARIGT-SYESNDGALSGRAGLAYEFDNGLTPYVSAATFFNPLVGTLASGPPLKPEEGEQYEAGIKYEpsFIDGLI 554

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 609 NASLaaFRIVQDNlgqqdVGYSVPGnpdSPAYYATDGATSKGVEFELSGALSENWNAFFFATHYS---AKDSDDNDVNTQ 685
Cdd:PRK14050  555 TASV--FQITKKN-----VTVTDPL---TFASTQLGEVRSRGFELEGKVNLDDNWKALASFTYTDleiTEDANPSLIGNS 624

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 686 ---LPRTMARLFTTYRLP-GQWKQLTVGGGANWQSRIYYDgvgpQGQRQEQSDYLVANLMARYDiTPQISAQLNVNNLFD 761
Cdd:PRK14050  625 pylVPETQASLWLDYAVTdGAFEGVSLGAGVRYQGESWAD----EANTLKVPAATLFDAAIRYE-KNDWGASLNVANLFD 699


                  ...
gi 2185791771 762 EKY 764
Cdd:PRK14050  700 KEY 702
PRK10044 PRK10044
ferrichrome outer membrane transporter; Provisional
 104-790 9.91e-38

ferrichrome outer membrane transporter; Provisional


Pssm-ID: 236643 [Multi-domain]  Cd Length: 727  Bit Score: 151.06  E-value: 9.91e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 104 ATTIVSNRLATTTEgtgsyttgataaaTGLPLstRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERT--V 181
Cdd:PRK10044   58 AATIAAKRSATGTK-------------TDTPI--EKTPQSISVVTAEEMALHQPKSVKEALSYTPGVSVGTRGASNTydH 122

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 182 FASRGFF---INDLQY-DGISsYYKSNYAagESELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRgEAQ 257
Cdd:PRK10044  123 LIIRGFAasgQSQNNYlDGLK-LQGNFYN--DAVIDPYMLERAELMRGPVSVLYGKSNPGGLLNMVSKRPTTEPLK-EVQ 198

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 258 VSAGSWDNYRSTLDLSGPLTPTGNVRGRLVGA-----YQDKKNFFDRYSreghvIYGVVDVDLTDATTLSLGASYQkSDA 332
Cdd:PRK10044  199 FKMGTDNLFQTGFDFSDALDDDGVYSYRLTGLarsanAQQKGSEEQRYA-----IAPSFTWRPDDKTNFTFLSYFQ-NEP 272

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 333 DGLTYGGVPlwnSDGSKTHY------SRSFSIAPKWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNARIFNWG 406
Cdd:PRK10044  273 ETGYYGWLP---KEGTVEPLpngkrlPTDFNEGAKNNTYSRNEKMVGYSFDHEFNDTFTVRQNLRYAENKTSQRSVYGYG 349

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 407 FPDPETGLIDAEPSQSRfpgERKQQ-STDLRLSGPFELFGRTHEAVVGATYFDHKYSFD-WIGNKTPWqSPVSVY----- 479
Cdd:PRK10044  350 VCSDKGHYLNRGYVVDD---EKLQNfSVDTQLQSKFATGDVDHTLLTGVDFMRMRNDINaWFGYADSV-PLLNLYgpvnt 425

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 480 --DFGHVAEPeWDYENRElsernhtKQKAGYAALRLSLaDPLKLILGGRFTQYDREGAGWASSGEYDYSDHKFIPYAGLV 557
Cdd:PRK10044  426 dfDFNANSGP-YQILNKQ-------KQTGLYVQDQAEW-DKWLVTLGGRYDWADQSSLNRVNGTTDKRDDKQFTWRGGVN 496

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 558 YDLNQNYSLYASYTSIFNFQDYRDRNGAWLDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNlgqqdvgySVPGNPDS 637
Cdd:PRK10044  497 YLFDNGITPYFSYSESFEPSSGTGKDGNIFAPSKGKQYEAGVKYVPKDRPIVVTGAVYQLTKTN--------NLTADPEN 568

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 638 PAYYATDGAT-SKGVEFELSGALSENWNAFFFATHYSAKDSDDNDV--NT--QLPRTMARLFTTYRL-PGQWKQLTVGGG 711
Cdd:PRK10044  569 SFFSVQGGEIrARGVELEAKAALSANVNVTGSYTYTDAEYTTDTTYkgNTpaQVPKHMASLWADYTFfDGPLSGLTLGTG 648

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 712 ANWQSRIYydgvGPQGQRQEQSDYLVANLMARYDIT----PQISAQLNVNNLFDEKY-QTAVNWYGqGVWGAPRNLMGTL 786
Cdd:PRK10044  649 GRYTGSSY----GDPANSFKVGSYTVVDALVKYDLArfgmAGSSVALNVNNLFDREYvASCFNTYG-CFWGAERQVVATA 723


                  ....
gi 2185791771 787 SYKF 790
Cdd:PRK10044  724 TFRF 727
PRK09840 PRK09840
catecholate siderophore receptor Fiu; Provisional
 139-790 3.25e-30

catecholate siderophore receptor Fiu; Provisional


Pssm-ID: 182105 [Multi-domain]  Cd Length: 761  Bit Score: 127.62  E-value: 3.25e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 139 ETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTvfASRGFFINDLQYDGISSYYksnyAAGESELDAIIYD 218
Cdd:PRK09840   70 DTTQTITVISEQVIKDQGATNLTEALRNVPGVGTFFAGENGN--TTTGDAIYMRGFDTSNSIY----VDGIRDIGSISRD 143

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 219 -----RIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRGeAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVG----- 288
Cdd:PRK09840  144 tfnteQVEVIKGPSGTDYGRSAPTGSINMISKQPRNDSGID-ASASIGSAWFRRGTLDVNQVIGDTTAVRLNVMGekthd 222

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 289 AYQDK-KNffDRYSREGHVIYGvvdvdLTDATTLSLgaSYQKSDADGLTYGGVPLWNSDGskthYSRSFSIAPKWNTE-E 366
Cdd:PRK09840  223 AGRDKvKN--ERYGVAPSVAFG-----LGTANRLYL--NYLHVTQNNTPDGGIPTIGLPG----YSAPSAGRAALNHAgK 289

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 367 VEVKNFFANlehrfDNDW------LAQFRVMHNRNevDNARIFN---WG----------FPDPETGLIDAEPSQ------ 421
Cdd:PRK09840  290 VDTHNFYGT-----DSDYddsttdTATMRFEHDIN--DNTTLRNttrWSrvkqdylltaIMGGASNITTPTPSDvntwtw 362

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 422 SRFPGERKQQSTDL----RLSGPFELFGRTHEAVVGATYFDHK---YSFdwigNKTPWQSpVSVYD-FGHVAEPEWDYEN 493
Cdd:PRK09840  363 SRTANTKDVSNKILtnqtNLTSTFYTGSIGHDVSTGVEFTRETqtnYGV----NPVTLPA-VNLYHpDSSIHPGGLTRNG 437

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 494 RELSERNHTKqkAGYAALRLSLADPLKLILGGRFTQYDRE----------------GAGWASSG------EYDYSDHKFI 551
Cdd:PRK09840  438 ANANGQTDTF--AIYAFDTLQLTRDWELNGGIRLDNYHTEydsatacggsgrgaitCPAGVAKGspvttvDTAKSGNLVN 515

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 552 PYAGLVYDLNQNYSLYASYT--------SIFNFQDYRDRNGAW---LDPVTGDAYEAGIKGEFLDGRLNASLAAFRivqd 620
Cdd:PRK09840  516 WKAGALYKLTENGNVYINYAvsqqppggSNFALAQSGSGNSANrtdFKPQKANTSEIGTKWQVLDKRLLLTAALFR---- 591

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 621 nlgqQDVGYSVPGNPDSpAYYATDGATSKGVEFELSGALSENWNAFFFATHYSAKDSDDNDVN-------TQLPRTMARL 693
Cdd:PRK09840  592 ----TDIENEVEQNDDG-TYSQYGKKRVEGYELSVAGNITPAWQVIAGYTQQKATVKNGKDVAqdgssslPYTPEHAFTL 666

                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 694 FTTYRLPGQwkqLTVGGGANWQSRIYYDGVGPQGQRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEKYQTAVNWYGQ 773
Cdd:PRK09840  667 WSQYQATDD---LSVGGGARYIGSMHRGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDLQLNVYNLFDTDYVASINKSGY 743

                         730
                  ....*....|....*...
gi 2185791771 774 GVW-GAPRNLMGTLSYKF 790
Cdd:PRK09840  744 RYHpGEPRTFLLTANMHF 761
PRK14049 PRK14049
ferrioxamine B receptor precursor protein; Provisional
 139-790 1.98e-25

ferrioxamine B receptor precursor protein; Provisional


Pssm-ID: 172541 [Multi-domain]  Cd Length: 726  Bit Score: 112.30  E-value: 1.98e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 139 ETPQSVSVITRQRMDDQNMTTLGDVLANAPG--ISAPQLDSERTVFASRGF-------FINDL-QYDGISSYYKSNYAAG 208
Cdd:PRK14049   78 ETPQSISSVTEQQLKDRNPQTLLETLAYTPGarVGAFGFDPRFDAFFVRGFdvtytgvFRDNLrQPGASSSIFKTEPYGL 157

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 209 ESeldaiiydrIEIVRGATGLLTGAGEPSASVNLVRKRADSKEFRgEAQVSAGSWDNYRSTLDLSGPLTPTGNVRGRLVG 288
Cdd:PRK14049  158 EG---------VSILRGPSSALYGASGAGGLFNLITKRPTEEPLR-EVQVQYGTNNRYQGQFDFSGPVNETDPVYYRLTG 227

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 289 AYQDKKNFFDRYSREGHVIYGVVDVDLTDATTLSLGASYQKSDAdgltyGGVPLWNSDGSKTHYSRSFSIAPKWNTEEVE 368
Cdd:PRK14049  228 LLRDADTEQVGVPDDRAYIAPAFTWKPDEDTRLTVLGEYSRTKT-----GGTAAYYNDPLTGEVTDIFAGNPAFNDSVQK 302

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 369 VKNFFANLEHRFdNDWLAqFRvmhnrnevDNARI------FNWGFPDPETgliDAEPS-QSRFPGERKQQST----DLRL 437
Cdd:PRK14049  303 QGRIGYEFEHRL-NDTFV-FR--------QNARVstlnidADWAFAYAPN---AADPTlLDSSAGTYDERLTafviDNQL 369

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 438 SGPFELFGRTHEAVVGATYFDHKY-SFDWIGNKTPWQS-------PVSVYDFGhvaepewdyenrelSERNHTKQKAGYA 509
Cdd:PRK14049  370 EAKFDTGAFEHTLLAGVDYTKLRFrALNGRGVSPPLDTknptqgrPVAAIDFS--------------TRTVQDQWQLGTY 435

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 510 ALRLSLADPLKLILGGRF----TQYDREGAGWASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIF--NFQDYRDRN 583
Cdd:PRK14049  436 LQDQIRYDAWTLTAGGRYdwvsTDTDTTDLATDSLTTVSQKDKEFSGRIGLTYETDFGLAPYISYSTAFspNAGFNRATN 515

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 584 GAWlDPVTGDAYEAGIKGEFLDGRLNASLAAFRIVQDNLGQQDVGYSVPGNPDSPAYYATdgATSKGVEFELSGALSENW 663
Cdd:PRK14049  516 QPF-KPTESEQQEVGVKYLLPNSNTLITAALFNIDQTNGLYYEVVFLAAGPTNIQVQRGK--LRSRGFELEANTSLDNGL 592

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 664 NAFFFATHYSAK------DSDDNDVNTqLPRTMARLFTTYRLP--GQWKQLTVGGGANWQSRIYydgvGPQGQRQEQSDY 735
Cdd:PRK14049  593 SLIASYTYTDVKiiqgpeGTIGNEVSS-VPNHMASAWAHYTLPegGPLYGLGLGAGARFVGSSY----GNDQNTFKNSSR 667

                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2185791771 736 LVANLMARYD---ITPQISA---QLNVNNLFDEKyqTAVNWYGQGVWGAPRNLMGTLSYKF 790
Cdd:PRK14049  668 VLFDASVGYDfaaIDKKYEGlmlQVNATNLFDRR--KAVCTAGFCYRDQGRTVIGSLRYNW 726
TonB-hemin TIGR01785
TonB-dependent heme/hemoglobin receptor family protein; This model represents the ...
 139-790 1.08e-24

TonB-dependent heme/hemoglobin receptor family protein; This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]


Pssm-ID: 273807 [Multi-domain]  Cd Length: 665  Bit Score: 109.79  E-value: 1.08e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 139 ETPQSVSVITRQRMDDQNMTTLGDVLANAPGISA--PQLDSERTVfASRGFFINDL--QYDGISSYYKSNYAAGESE-LD 213
Cdd:TIGR01785  17 EAPASVSVISGEQIESKQANNLADALNTVPGVDVtgGGRPPGQSI-NIRGLQDNRVlvVVDGARQNYQRGGAHNGSLfVD 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 214 AIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRA-----DSKEFRGEAQVSAGSWDNYRSTLD-LSGPLTPtgNVRGRLV 287
Cdd:TIGR01785  96 PELLKRIEIVKGPSSSLYGSGALGGVVAFRTKDAadllrPGQLFGGLAKLSYGSNNNSFGGSVaVAGRLDD--NLDALVA 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 288 GAYQDKKNFfdRYSREGHVIYgvvdvdlTDATTLSLGA--SYQKSDADGLTYGGVplwNSDGSKTHYSRSF---SIAPKW 362
Cdd:TIGR01785 174 ATYRDGGNY--RNGNKEEATN-------SAYVQKNLLAklGWQLDDAQRLEFSYF---TTEGSLDEAQNSGpgtEYVLGS 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 363 NTEEV--EVKNFFANLEHRF---DNDWL-AQFRVMHNRNEVDNARifnwgfpdpetglidaepSQSRFPGERKQQSTDL- 435
Cdd:TIGR01785 242 SSTLLasSTRDRSATLTYNWtpeDNPWLdATASLYYNRTENDNDR------------------SARGVGREEGYQYTTYg 303

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 436 -RLSGPFELFGRTHEAVVgatyfdhkYSFDWIGNKTPWQSpvsvydfghvAEPEWDYENRELSERNHTKQKAGYAALRLS 514
Cdd:TIGR01785 304 aTLQNTSRFDVASWSTLT--------YGVDWMKDKRRTES----------FDPNSVTTIVPNPPSAKEYFFGLFLQDNIP 365

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 515 L-ADPLKLILGGRFTQYDREGAGWASSGEYDYSDHKFIPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW------- 586
Cdd:TIGR01785 366 LlDDRLTLSAGLRYDHYKLSPKTTADTEAVDRSYSRWSPSLGLSYKPVDWLTLYASYSQGFRAPSIDELYGTGdhpgtpg 445

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 587 ---------LDPVTGDAYEAGIKGEFL-----DGRLNASLAAFRIVQDNLGQQDVGYSVPGNPDSPAYYAT---DGATSK 649
Cdd:TIGR01785 446 gytfapnpnLKPETSKTWELGANLSFDnllldNDQLQFKVAYFYNDVKDFIDLTIGVTDNVTAGMNNITQYvniDGARIR 525

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 650 GVEFELSGALsENWNAFFFATHYSAKDSDDNDVNTQLPRTMARLFTTYRLPgQWKqltVGGGANW-----QSRIYYDGVG 724
Cdd:TIGR01785 526 GIEASASYDA-GLWATGLSYGYTIGKDQNTNQWLSNIPPLKLVVTVGYRFP-DRR---LDLGAKAayyerQSESPTTEDV 600

                         650       660       670       680       690       700
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2185791771 725 PQGQRQEQSDYLVANLMARYDIT--PQISAQLNVNNLFDEKYQTAVNWYGQgvwGAPRNLMGTLSYKF 790
Cdd:TIGR01785 601 AANGLLTTPGYTVVDLYATYQPNavKGLTVRFGVNNLTDRKYTPAQSVPGA---GPGRNFKGSVKYQF 665
Plug pfam07715
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
 136-236 1.90e-18

TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.


Pssm-ID: 462243 [Multi-domain]  Cd Length: 107  Bit Score: 81.16  E-value: 1.90e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 136 STRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQ-LDSERTVFASRGFFINDLQY--DGISSYYKSNYAAGESEL 212
Cdd:pfam07715   1 DLRDTPGSVSVVTAEDIEDQGATNLADALRGVPGVSVSSgGGGGGSSISIRGFGSNRVLVlvDGVPLNSGGGGSVDLNSI 80

                          90       100
                  ....*....|....*....|....
gi 2185791771 213 DAIIYDRIEIVRGATGLLTGAGEP 236
Cdd:pfam07715  81 DPEDIERVEVLKGPASALYGSGAI 104
BtuB COG4206
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
133-401 5.62e-16

Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];


Pssm-ID: 443355 [Multi-domain]  Cd Length: 276  Bit Score: 79.15  E-value: 5.62e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 133 LPLSTRETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQ---LDSERTVFAsRGFFINDLQY--DGISSYYKSNYAA 207
Cdd:COG4206     8 LEQSKSDLTGSVTVIDAEELERSGATSLADALRRVPGVQVSSsggPGSAASISI-RGLGSNQTLVliDGVPLNDPSLGGV 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 208 GESELDAIIYDRIEIVRGATGLLTGAGEPSASVNLVRKRAdSKEFRGEAQVSAGSWDNYRSTLDLSGpltPTGNVRGRLV 287
Cdd:COG4206    87 DLSLIPPDDIERIEVLKGAASALYGSDAIGGVINITTKKG-KKGFKGSVSASYGSFGTRRLSASLSG---GAGKFSYSLS 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 288 GAYQDKKNF--FDRYSR-----EGHVIYGVVDVDLTDATTLSLGASYQKSDADgltyggvpLWNSDGSKTHYSRSFSIAP 360
Cdd:COG4206   163 ASYRRSDGYryNDPDLRnndgyENTSLNARLGYKLGDNGSLSLSGGYSDSERG--------YPGAVGSDRNLRLSLSLEY 234

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2185791771 361 KWNTEEVEVKNFFANLEHRFDNDWLAQFRVMHNRNEVDNAR 401
Cdd:COG4206   235 KLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGARAGLS 275
OMP_b-brl_3 pfam14905
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
 506-788 1.00e-07

Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.


Pssm-ID: 434300 [Multi-domain]  Cd Length: 407  Bit Score: 54.97  E-value: 1.00e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 506 AGYAALRLSLaDPLKLILGGRFTQYDREGAGWASSGEYDYSDHKFIPYAGLVYDLNQN--YSLYASYTSIFN-------- 575
Cdd:pfam14905 116 AAYASYSKKF-GKWSYQAGLRAEYTDIDGDSVTTNETFKRNYFNLFPSASLSYKLNDNnsLQLSLYYRRIINrpsywdln 194

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 576 -FQDYRDRNGAW-----LDPVTGDAYEAGIKgefLDGRLNASLAaFRIVQDNLGQQ-------DVGYSVPGNpdspayya 642
Cdd:pfam14905 195 pFRNYSDPYNYSqgnpnLKPEYTNSFELGYT---YKWKLSLSLS-YRYTNDVIQQTfitddndNVTYTTYEN-------- 262

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 643 TDGATSKGVEFELSGALSENW--NAFFFATHYSAKDSDDNDVNTQLPRTMARLFTTYRLPGQWK-QLTvgggANWQSRiy 719
Cdd:pfam14905 263 LGKSNSYGLELSASFNPTKWWslNGNLNGYYNKYKIDGSLNSDFSNFGFNWNLNNTFTLPKGWSlQLN----GNYRSP-- 336

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2185791771 720 ydGVGPQGQRQEQSDYlvaNLMARYDITP-QISAQLNVNNLFDEKYQTAVNWYGQGV------WGAPRNLMGTLSY 788
Cdd:pfam14905 337 --RVTGQGKIKPFYSL---DLGLSKSFLKkKLTLSLNVNDIFNTRKFRSTTNYDNGFiqsynnKWDSRSVRLSLSY 407
PRK10064 PRK10064
catecholate siderophore receptor CirA; Provisional
 138-762 1.64e-07

catecholate siderophore receptor CirA; Provisional


Pssm-ID: 236646 [Multi-domain]  Cd Length: 663  Bit Score: 54.89  E-value: 1.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 138 RETPQSVSVITRQRMDDQNMTTLGDVLANAPGISAPQLDSERTVFASRGF-------FINDLQYDGISSYYKSN-YAAGE 209
Cdd:PRK10064   45 KDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGLdssytliLIDGKRVNSRNAVFRHNdFDLNW 124

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 210 SELDAIiyDRIEIVRGATGLLTGAGEPSASVNLVRKRAdSKEFRGEAQVSA------GSWDNYRSTLDLSGPLtptgnVR 283
Cdd:PRK10064  125 IPVDAI--ERIEVVRGPMSSLYGSDALGGVVNIITKKI-GQKWHGTVTVDTtiqehrDRGDTYNGQFFTSGPL-----ID 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 284 GRLvgayqdkknffdrysreGHVIYGVVDVDLTDATtlslgasyQKSDAdglTYGGVPLWNSDGSKTHYSRSFSIAPKwn 363
Cdd:PRK10064  197 GVL-----------------GMKAYGSLAKREKDDP--------QNSTT---TDTGETPRIEGFTSRDGNVEFAWTPN-- 246

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 364 teevEVKNFFANLEhrFDndwlaqfRVMHNRNEVDNARIFNWGFPDPETGLIDAEPSQSRFPGERKQQSTDlrlsgpfel 443
Cdd:PRK10064  247 ----QNHDFTAGYG--FD-------RQDRDSDSLDKNRLERQNYSLSHNGRWDYGNSELKYYGEKVENKNP--------- 304

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 444 fGRTHEAVVGATYFDHKYSFdwignktPWQSPVSVYDFGhvaePEWDYENRE----LSERNHTKQKAGYAALRLS----L 515
Cdd:PRK10064  305 -GNSSPITSESNSIDGKYTL-------PLTAINQFLTFG----GEWRHDKLSdavnLTGGTSSKTSASQYALFVEdewrI 372

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 516 ADPLKLILGGRFTQYDREGAGWAssgeydysdhkfiPYAGLVYDLNQNYSLYASYTSIFNFQDYRDRNGAW--------- 586
Cdd:PRK10064  373 FEPLALTTGVRMDDHETYGDHWS-------------PRAYLVYNATDTVTVKGGWATAFKAPSLLQLSPDWtsnscrgac 439

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 587 -------LDPVTGDAYEAGIKGEFLDGRLN---ASLAAFR-IVQDNLG-------------QQDVGYSVPGNPDSP---A 639
Cdd:PRK10064  440 kivgspdLKPETSESWELGLYYMGEEGWLEgveSSVTVFRnDVDDRISisrtsdvnaapgyQNFVGFETNGRGRRVpvfR 519

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 640 YYATDGATSKGVEFELSGALSENWNAFFFATHYSAKD--SDDNDVNTQLPRTMARLFTTYRlPGQWKQLTVGGGANW--- 714
Cdd:PRK10064  520 YYNVNKARIQGVETELKIPFNDEWKLSLNYTYNDGRDvsNGENKPLSDLPFHTANGTLDWK-PLALEDWSFYVSGNYtgq 598

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|....*...
gi 2185791771 715 QSRIYYDGVGPQGqrqeqsdYLVANLMARYDITPQISAQLNVNNLFDE 762
Cdd:PRK10064  599 KRADSATAKTPGG-------YTIWNTGAAWQVTKDVKLRAGVLNLGDK 639
STN smart00965
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ...
 44-92 5.38e-07

Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.


Pssm-ID: 198033 [Multi-domain]  Cd Length: 52  Bit Score: 46.73  E-value: 5.38e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 2185791771   44 LQVLYRPEDVAGKRSQALRGKREPSQALSELLQGTG-AAQHIEGDTATVS 92
Cdd:smart00965   1 LNFVYDPALVAGRRVSLLLGNVTVEQALDRLLAGTGlTYRRIGGNTIVLS 50
STN pfam07660
Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of ...
 45-92 1.37e-05

Secretin and TonB N terminus short domain; This is a short domain found at the N-terminus of the Secretins of the bacterial type II/III secretory system as well as the TonB-dependent receptor proteins. These proteins are involved in TonB-dependent active uptake of selective substrates.


Pssm-ID: 429580 [Multi-domain]  Cd Length: 51  Bit Score: 42.89  E-value: 1.37e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2185791771  45 QVLYRPEDVAGKRSQALRGKREP-SQALSELLQGTGAAQHIEGDTATVS 92
Cdd:pfam07660   1 SILYDSDLVDGKQSVSLNVGNVTlEEALDQLLAGTGLSYEIGGNTIVLR 49
btuB PRK10641
TonB-dependent vitamin B12 receptor BtuB;
562-790 6.42e-05

TonB-dependent vitamin B12 receptor BtuB;


Pssm-ID: 236730 [Multi-domain]  Cd Length: 614  Bit Score: 46.52  E-value: 6.42e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 562 QNYSLYASYTSIFN-------FQDYRDRNgawLDPVTGDAYEAGIKGefLDGRLNASLAAFRIVQDNLGQQDvgysvpgn 634
Cdd:PRK10641  401 DGYRFIASYGTAFKapnlgqlYGFYGNPN---LKPEESKQWEGGFEG--LTGPVNWRLSGYRNDIDNLIDYD-------- 467

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 635 PDSPAYYATDGATSKGVEfelsgalsenWNAFF---FATH---YSAKDSDDNDVNTQLPRTmARLFTTYRLPGQWKQLtv 708
Cdd:PRK10641  468 DHTLKYYNVGKATIKGVE----------WTGNFdtgPLTHqvtLDYVDPRNAITDEPLARR-AKQQVKYQLDWQLYDF-- 534

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2185791771 709 GGGANWQ---SRIYYDGVGPQGQRQEQSDYLVANLMARYDITPQISAQLNVNNLFDEKYQTAvnwYGQGVWGAPRNLMGt 785
Cdd:PRK10641  535 DWGVTYQylgTRYDKDYSTYPYQTVKLGGVSLWDLAVSYPVTSHLTVRGKIANLFDKDYETV---YGYQTAGREYTLSG- 610


                  ....*
gi 2185791771 786 lSYKF 790
Cdd:PRK10641  611 -SYTF 614
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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