|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
49-769 |
3.95e-74 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 253.26 E-value: 3.95e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGN-PSLPTLRGQ--LGELFQDGVRRQAGNngfgiPISFNA 125
Cdd:COG4774 6 LLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGnGDSFSIRGFsaSGDIYVDGLRDPGQY-----RRDTFN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 126 IEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKAnTEQSQGKLVLSAGRWDHYSAQLDYTAPIVEgKSGFRVSAEHIDNGSF 205
Cdd:COG4774 81 LERVEVLKGPASVLYGRGS-PGGVINLVTKRP-TDEPFTEVTLTYGSDGQRRATLDVNGPLGD-DLAYRLNGMYRDSDSY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 206 YDFSGYKSDSLFAAVRFLPDAQSSLDINFELYQVEFTDNAGInrPTQaliddglyitgqgiqPNGSTiagagaiisptgq 285
Cdd:COG4774 158 RDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGV--PAV---------------ANGRP------------- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 286 VRIPRNRVLTDPDNINEATTYLLHSIYKRELNDKTTLKNTTYFQHLQREeiAQNSFVEIIDGADTAQnrteLSYQWNDSQ 365
Cdd:COG4774 208 VDVDRSTFYGQPDDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRD--YRNTYPTGGNATGTVT----RSAYRRDQD 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 366 SSIFAFDVRFNkvkgfSQFTTeadlpidltGPIENRripLTT-------EQKARLVELKPGVFVSPGAQYDLDNDGVGDF 438
Cdd:COG4774 282 NDTLSNQTDLT-----GKFDT---------GGVKHT---LLAgveysreDSDNARYSGGGTAPTVNLYNPVYGAPVTGPT 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 439 SLSDTTDSTSWQTGLAFVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQGQVAARDNIYetlhAGQISVNYKLTAELTSY 518
Cdd:COG4774 345 LGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTTGATTSSYDDSAF----SPRAGLVYKPTPNLSLY 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 519 itGNYNEATSnsmAGGNVLGSDNqiSAQNFA-TDNTLAEIGLKFSPTDSPWYVDAALFNQRRS-LRNRDGSNTGI----- 591
Cdd:COG4774 421 --ASYSTSFN---PGGGAPSLSN--AGQALDpEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTnVRTTDPANPGVyvqtg 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 592 --RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSASSQDSNqvadafdnsrpdiingtgigapnfasfppstRRVQGIP 668
Cdd:COG4774 494 eqRSRGVELEATGELTPGWsVLAGYTYLDAEITKSANAANVG-------------------------------NRLPNVP 542
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 669 EQSFSFNSGFSIT-PQWDIGLGGIYTKSYPLDFLATVRIRDQYTLNVNTRYAFSEQTSLRLDITNVTNQDNWRPVFEGGY 747
Cdd:COG4774 543 RHSASLWTTYDLPlPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGY 622
|
730 740
....*....|....*....|..
gi 2189084700 748 fgstlVFPELPIHAKLTFQHTF 769
Cdd:COG4774 623 -----VTPGAPRTVLLSASYRF 639
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
55-747 |
1.95e-28 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 121.40 E-value: 1.95e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 55 SVTPITREMIEQLNITTLQDILSITPN-SYSASGFGNPSLPTLRGqLGELFQ----DGVRRQAGNNGFGIP---ISFNAI 126
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGvSVTRGGGGGGSTISIRG-FGPDRTlvlvDGLPLASSNYGRGVDlntIPPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 127 EQIDVVKGAPPVLFGSSQrNGGFVNLSSKKANTEQSqGKLVLSAG---RWDHYSAQLDYTAPIVE-GKSGFRVSA----- 197
Cdd:cd01347 80 ERVEVLKGPSSALYGSGA-IGGVVNIITKRPTDEFG-GSVTAGYGsdnSGSSGGGGFDVSGALADdGAFGARLYGayrdg 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 198 -EHIDNGSFYDFSGYKSDSLFAAVRFLPDAQSSLDInfelyqveftdnaginrptqalidDGLYITGQGIQPNGSTIAGA 276
Cdd:cd01347 158 dGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTL------------------------DAGYQDQDADGPGGTLPANG 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 277 GAIISPTGQvriPRNRVLTDPDNINEATTYLLHSIYKRELNDKT-TLKNTTYFQHLQReeiaqNSFVEIIDGADTAQN-R 354
Cdd:cd01347 214 TGSSLGGGP---SSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGwTLRANLSYSYTDN-----DGDPLILNGGNNAAGgD 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 355 TELSYQWNDSQSSIFAFDVRFNkvkgfsqftteadLPIDlTGPIENRripLTTeqkarlvelkpgvfvspGAQYDLDndg 434
Cdd:cd01347 286 LGRSGYSSERDTTQLGFDAGLN-------------APFG-TGPVAHT---LTL-----------------GVEYRRE--- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 435 vgdfslsdttDSTSWQTGLAFVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQGQVAARDNIYetlhAGQISVNYKLTAE 514
Cdd:cd01347 329 ----------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYDQDSKDTIAGGTTAKKSYSHW----SPSLGLVYKLTDG 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 515 LTSYitGNYNEA----TSNSMAGGNVLGSDNQISAQNFA---TDNtlAEIGLKFSPtDSPWYVDAALF-NQRRSLRNRDG 586
Cdd:cd01347 395 LSLY--ASYSQGfrapSLGELYGGGSHGGTAAVGNPNLKpekSKQ--YELGLKYDP-GDGLTLSAALFrIDIKNEIVSTP 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 587 SNTGI------------RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSASSQDSNqvadafdnsrpdiingtgigapn 653
Cdd:cd01347 470 TNTGLglvtvyvnggkaRIRGVELEASYDLTDGLgLTGSYTYTDTEVKRTDGATTGN----------------------- 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 654 fasfppstrRVQGIPEQSFSFNSGFSIT-PQWDIGLGGIYTKSYPLDFLA---TVRIRDQYTLNVNTRYAFSEQTSLRLD 729
Cdd:cd01347 527 ---------RLPGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTANgnnTVKVPGYTLVDLSASYQFTKNLTLRLG 597
|
730
....*....|....*...
gi 2189084700 730 ITNVTNQDNWRPVFEGGY 747
Cdd:cd01347 598 VNNLFDKDYYTSLSVRGS 615
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
51-740 |
2.48e-26 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 114.82 E-value: 2.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 51 DIARSVTPITREMIEQLNITTLQDILSITPNSY--SASGFGNPSLPTLRGQLGELFQDGVR----RQAGNNGFGIPISFN 124
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVvgGSGGTTQFGNITIRGFGLEVDIDNVYldgvPLLSRGNLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 125 aIEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKANTEQsQGKLVLSAGRWDHYSAQLDYTAPI-VEGKSGFRVSAEHIDNG 203
Cdd:TIGR01783 81 -VERVEVLRGPASLLYGGSA-PGGVINIVTKRPQDEP-KGSVTFGAGTRSGYRTAFDLGGPLgADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 204 SFYDFSGYKSDSLFAAVRFLPDAQSSLDINFElYQVEFTDnaginrptqaliddglyiTGQGIQPNGSTIAGAgaiispt 283
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAY-YQKERDR------------------GGYGGLPASGGTSGR------- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 284 gqvRIPRNRVLTDPDNINEATTYLLHSIY--KRELNDKTTLKNTTYFQHLQreeiaQNSFVEIIDGADTAQNRTELSYQW 361
Cdd:TIGR01783 212 ---DLSSDRYLGTSSNRNYDDREYLSYGLslEYQFNDVWTGKQNLRYSYFD-----TDSNQVQASGYSSDGGLFGRSLTV 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 362 NDSQSSIFAFDVRFNkvkgfSQFTTeADLPIDLTGPIENRRIPLTTEQKARLVELK---PGVFVSPGAQYDLdndgvgDF 438
Cdd:TIGR01783 284 VNVKQDRVQIDAGLD-----GEFET-GPIEHDLLLGVSYGQRTTNRFNNTGYPSDNiysLTATSSARTDIGD------SP 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 439 SLSDTTDSTSWQTGLAfVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQgqvaARDNIYETLhAGQISVNYKLTAELTSY 518
Cdd:TIGR01783 352 KDRALSSTTKALNGVA-LQRILLADKWTLTLGGRYDSVDVKSNNGVAGS----TGKRDDSQF-TPSLGVAYKPTDDWSLY 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 519 itGNYNEA-TSNSMAGGNVLGSDNQISAQNfaTDNTlaEIGLKFSPTDSpWYVDAALFNQRRSLRNRDGSNTG------- 590
Cdd:TIGR01783 426 --ASYAESfKPGGYYPKGAGNSGDILEPEK--GKNY--ELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGtfsvnag 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 591 -IRTKGFETQVFYDAGQYW-FNAGYSYIDARYdNSASSQDSNQvadafdnsrpdiingtgigapnfasfppstRRVQGIP 668
Cdd:TIGR01783 499 kTRNRGVELEARGYLTPGLsLSAGYTYTDAEF-TEDTNGDTQG------------------------------NTVPFVP 547
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2189084700 669 EQSFSFNSGFSITPQWD---IGLGGIYTKSYPLDFLATVRIRDQYTLNVNTRYAF--SEQTSLRLDITNVTNQDNWR 740
Cdd:TIGR01783 548 KHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYT 624
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
49-143 |
4.87e-13 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 65.75 E-value: 4.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPN-SYSASGFGNPSLPTLRGQLGE---LFQDGVRRQAGNNGFGI--PIS 122
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGvSVSSGGGGGGSSISIRGFGSNrvlVLVDGVPLNSGGGGSVDlnSID 81
|
90 100
....*....|....*....|.
gi 2189084700 123 FNAIEQIDVVKGAPPVLFGSS 143
Cdd:pfam07715 82 PEDIERVEVLKGPASALYGSG 102
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
50-220 |
1.40e-05 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 48.71 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 50 QDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGNPSLPTLRG-QLGELFQDGVRRQAGNN-GFGIPISFNAI- 126
Cdd:PRK10003 76 RDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGfQIDNYMVDGIPTYFESRwNLGDALSDTALf 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 127 EQIDVVKGAPPVLFGSSQRNgGFVNLSSKKANTEQSQGKLVLSAGRWDHYSAQLDYTAPIVE-GKSGFRVSAEHIDNGSF 205
Cdd:PRK10003 156 ERVEVVRGATGLMTGTGNPS-AAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQSPLTEdGKVRARIVAGYQNNDSW 234
|
170
....*....|....*
gi 2189084700 206 YDFSGYKSDSLFAAV 220
Cdd:PRK10003 235 LDRYNSEKTFFSGIV 249
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
49-769 |
3.95e-74 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 253.26 E-value: 3.95e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGN-PSLPTLRGQ--LGELFQDGVRRQAGNngfgiPISFNA 125
Cdd:COG4774 6 LLDTPQSVTVVTRELIEDQGATSLADALRNVPGVTFGAGEGGnGDSFSIRGFsaSGDIYVDGLRDPGQY-----RRDTFN 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 126 IEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKAnTEQSQGKLVLSAGRWDHYSAQLDYTAPIVEgKSGFRVSAEHIDNGSF 205
Cdd:COG4774 81 LERVEVLKGPASVLYGRGS-PGGVINLVTKRP-TDEPFTEVTLTYGSDGQRRATLDVNGPLGD-DLAYRLNGMYRDSDSY 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 206 YDFSGYKSDSLFAAVRFLPDAQSSLDINFELYQVEFTDNAGInrPTQaliddglyitgqgiqPNGSTiagagaiisptgq 285
Cdd:COG4774 158 RDGVDNDRWGIAPSLTWRLGDRTRLTLDYEYQDDDRTPDYGV--PAV---------------ANGRP------------- 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 286 VRIPRNRVLTDPDNINEATTYLLHSIYKRELNDKTTLKNTTYFQHLQREeiAQNSFVEIIDGADTAQnrteLSYQWNDSQ 365
Cdd:COG4774 208 VDVDRSTFYGQPDDYSDSETDSATLRLEHDFNDNWTLRNALRYSDYDRD--YRNTYPTGGNATGTVT----RSAYRRDQD 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 366 SSIFAFDVRFNkvkgfSQFTTeadlpidltGPIENRripLTT-------EQKARLVELKPGVFVSPGAQYDLDNDGVGDF 438
Cdd:COG4774 282 NDTLSNQTDLT-----GKFDT---------GGVKHT---LLAgveysreDSDNARYSGGGTAPTVNLYNPVYGAPVTGPT 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 439 SLSDTTDSTSWQTGLAFVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQGQVAARDNIYetlhAGQISVNYKLTAELTSY 518
Cdd:COG4774 345 LGGADNDSRTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTTGATTSSYDDSAF----SPRAGLVYKPTPNLSLY 420
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 519 itGNYNEATSnsmAGGNVLGSDNqiSAQNFA-TDNTLAEIGLKFSPTDSPWYVDAALFNQRRS-LRNRDGSNTGI----- 591
Cdd:COG4774 421 --ASYSTSFN---PGGGAPSLSN--AGQALDpEKSRQYEVGVKWDLLDGRLSLTAALFRIEKTnVRTTDPANPGVyvqtg 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 592 --RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSASSQDSNqvadafdnsrpdiingtgigapnfasfppstRRVQGIP 668
Cdd:COG4774 494 eqRSRGVELEATGELTPGWsVLAGYTYLDAEITKSANAANVG-------------------------------NRLPNVP 542
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 669 EQSFSFNSGFSIT-PQWDIGLGGIYTKSYPLDFLATVRIRDQYTLNVNTRYAFSEQTSLRLDITNVTNQDNWRPVFEGGY 747
Cdd:COG4774 543 RHSASLWTTYDLPlPGLTLGGGVRYVGSRYADAANTVKLPSYTRFDAGASYRLNKNLTLRLNVNNLTDKRYYASAYGSGY 622
|
730 740
....*....|....*....|..
gi 2189084700 748 fgstlVFPELPIHAKLTFQHTF 769
Cdd:COG4774 623 -----VTPGAPRTVLLSASYRF 639
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
11-769 |
3.41e-60 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 215.91 E-value: 3.41e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 11 ATENNEIEVIQISGEQLKNTQISPKDTPInGPFGDdLFLQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGN 90
Cdd:COG4773 26 AAEATTLPEVTVTGTAEGTGGYTAKSSST-ATKLD-TPLRETPQSVSVVTRQLIEDQGATTLDDALRNVPGVTVSSYDGG 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 91 P-SLPTLRG-QLGELFQDGVRrQAGNNGFGIPISFnaIEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKAnTEQSQGKLVL 168
Cdd:COG4773 104 GrDSFSIRGfSIDNYLRDGLP-LGGFGGGQPDTAN--LERVEVLKGPAGLLYGAGS-PGGLVNLVTKRP-TAEPQGEVSL 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 169 SAGRWDHYSAQLDYTAPIVEGKS-GFRVSAEHIDNGSFYDFSGYKSDSLFAAVRFLPDAQSSLDINFELYQVEFTDNAGI 247
Cdd:COG4773 179 SAGSWDTYRATADVGGPLNEDGTlRYRLNAAYEDGDSFRDGVDNRRTLIAPSLDWDLTDDTTLTLGAEYQDDDSTGDRGF 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 248 nrptqaLIDDGlyitgqgiqpngstiagagaiisptGQVRIPRNRVLTDPDNINEATTYLLHSIYKRELNDKTTLKNTTY 327
Cdd:COG4773 259 ------LPLDG-------------------------TLLDLPRSTNLGEPWDYYDTETTTLFAELEHRFNDDWSLRANAR 307
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 328 FQHLQREeiaqNSFVEIIDGADTAQNRTELSYQWNDSQSSIFAFDVRFN-KVKgfsqftteadlpidlTGPIENRripLT 406
Cdd:COG4773 308 YSDSDRD----GRSAYAYGAPDAATGTLTRYASARDGDSRSDSLDANLNgKFE---------------TGGLEHT---LL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 407 -----TEQKARLVELKPGVFvspgaqyDLDNDGVGDFSLSDT----TDSTSWQTGLaFVHDS-QWTEKLRTSLGYRLDYY 476
Cdd:COG4773 366 vgadySRYDSDSDSATAGTI-------NIYNPVYGNLPEPDFdasdTDTTTRQTGL-YAQDQiSLTDRLSLLLGGRYDWY 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 477 DVEARDPIAPQGQVAARDNIyetlhAGQISVNYKLTAELTSYitGNYNEA---TSNSMAGGNVLgsDNQISAQnfatdnt 553
Cdd:COG4773 438 ETDSTNRLGGSTTSYDDSAF-----TPRAGLVYDLTPGLSLY--ASYSESfepQSGADNNGNPL--DPETGKQ------- 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 554 lAEIGLKFSPTDSPWYVDAALFNQRRSLRN-RDGSNTGI-------RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSA 624
Cdd:COG4773 502 -YEAGVKGELFDGRLNATLAVFDITQKNVAtTDPDNPNFyvqvgevRSRGVELELSGELTPGLnLIAGYTYTDAKITKDA 580
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 625 SSQDSNqvadafdnsrpdiingtgigapnfasfppstrRVQGIPEQSFSFNSGFSIT----PQWDIGLGGIYTKSYPLDF 700
Cdd:COG4773 581 DALEGK--------------------------------RLTNVPRHTASLWTTYRFPsgalKGLGLGGGVRYVGERYGDA 628
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2189084700 701 LATVRIRDQYTLNVNTRYAFSEQTSLRLDITNVTNQDNWRpvfegGYFGSTLVFPELPIHAKLTFQHTF 769
Cdd:COG4773 629 ANTFTLPSYTLVDAGARYDLGKNWTLQLNVNNLFDKKYYA-----SSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
49-747 |
5.85e-52 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 191.96 E-value: 5.85e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGNPSLPTLRGQLGE-----LFQDGVR--RQAGNNGFGIPI 121
Cdd:COG1629 15 LQDVPGSVSVISREQLEDQPATDLGDLLRRVPGVSVTSAGGGAGQISIRGFGGGgnrvlVLVDGVPlnDPSGGDGGLSYI 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 122 SFNAIEQIDVVKGAPPVLFGSSQRnGGFVNLSSKKANTEQSqGKLVLSAGRWDHYSAQLDYTAPivEGKSGFRVSAEHID 201
Cdd:COG1629 95 DPEDIERVEVLRGPSSALYGSGAL-GGVINIVTKKPKDGKG-GEVSASYGSYGTYRASLSLSGG--NGKLAYRLSASYRD 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 202 NGSFYDFSGYKSDSLFAAVRFLPDAQSSLDINFELYQVEFtdnaginrptqaliDDGLYITGQGIQPNGSTIAGAGAIis 281
Cdd:COG1629 171 SDGYRDNSDSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQ--------------DSPGYLTLAALRPRGAMDDGTNPY-- 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 282 ptgqvriprnrvlTDPDNINEATTYLLHSIYKReLNDKTTLKNTTYFQHLQREEIAQNSFVEIIDGADTAQNRTELSYQW 361
Cdd:COG1629 235 -------------SNDTDDNTRDRYSLSLEYEH-LGDGLKLSASAYYRYDDTDLDSDFTPTPADGGTLEQTDFDNRTYGL 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 362 NDSQSSIFAFDVRFNKVKGFSQFTTEADlpidltgpienrripltteqkarlvelkpgvfvSPGAQYDLDNDGVGDFSLS 441
Cdd:COG1629 301 ELRLTYDLGFGGKHTLLVGLDYQRQDLD---------------------------------GSGYPLDLGSGSLPTLTSG 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 442 DTTDSTSWQTGLaFVHDS-QWTEKLRTSLGYRLDYYDVEARDPIapQGQVAARDNIYETLHAGQISVNYKLTAELT---- 516
Cdd:COG1629 348 ADDDGTTTSLAL-YAQDTyKLTDKLTLTAGLRYDYVSYDVDDTV--TGTDSASGSRSYSAFSPSLGLTYQLSPNLSlyas 424
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 517 ---SYITGNYNEATSNSMAGGNVLGSDNQisaqnfATDNTLAEIGLKFSPTDSPWYVDAALFNQRRS---LRNRDGSNTG 590
Cdd:COG1629 425 ysrGFRAPTFGELYANGTDPYSVGNPDLK------PETSTNYELGLRYRLLDGRLSLSLALFYSDVDneiLSVPLPNDSG 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 591 I----------RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSASsqdsnqvadafdnsrpdiingtgigapnfASFPP 659
Cdd:COG1629 499 FstyytnagkaRSYGVELELSYQLTPGLsLNASYSYTDAKFDDDTD-----------------------------GSADL 549
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 660 STRRVQGIPEQSFSFNSGFSITPQWDIGLGGIYTKSYPLDFLATVRIRDQYTL-NVNTRYAFSEQTSLRLDITNVTNQDN 738
Cdd:COG1629 550 DGNRLPGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGAPGGYTLvDLGAGYRFGDNLTLSLGVDNLFDKKY 629
|
....*....
gi 2189084700 739 WRPVFEGGY 747
Cdd:COG1629 630 ATSLSVRAS 638
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
55-747 |
1.95e-28 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 121.40 E-value: 1.95e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 55 SVTPITREMIEQLNITTLQDILSITPN-SYSASGFGNPSLPTLRGqLGELFQ----DGVRRQAGNNGFGIP---ISFNAI 126
Cdd:cd01347 1 SVSVITAEDIEKQPATSLADLLRRIPGvSVTRGGGGGGSTISIRG-FGPDRTlvlvDGLPLASSNYGRGVDlntIPPELI 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 127 EQIDVVKGAPPVLFGSSQrNGGFVNLSSKKANTEQSqGKLVLSAG---RWDHYSAQLDYTAPIVE-GKSGFRVSA----- 197
Cdd:cd01347 80 ERVEVLKGPSSALYGSGA-IGGVVNIITKRPTDEFG-GSVTAGYGsdnSGSSGGGGFDVSGALADdGAFGARLYGayrdg 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 198 -EHIDNGSFYDFSGYKSDSLFAAVRFLPDAQSSLDInfelyqveftdnaginrptqalidDGLYITGQGIQPNGSTIAGA 276
Cdd:cd01347 158 dGTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTL------------------------DAGYQDQDADGPGGTLPANG 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 277 GAIISPTGQvriPRNRVLTDPDNINEATTYLLHSIYKRELNDKT-TLKNTTYFQHLQReeiaqNSFVEIIDGADTAQN-R 354
Cdd:cd01347 214 TGSSLGGGP---SSNTNGDRDWDYRDRYRKRASLGLEHDLNDTGwTLRANLSYSYTDN-----DGDPLILNGGNNAAGgD 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 355 TELSYQWNDSQSSIFAFDVRFNkvkgfsqftteadLPIDlTGPIENRripLTTeqkarlvelkpgvfvspGAQYDLDndg 434
Cdd:cd01347 286 LGRSGYSSERDTTQLGFDAGLN-------------APFG-TGPVAHT---LTL-----------------GVEYRRE--- 328
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 435 vgdfslsdttDSTSWQTGLAFVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQGQVAARDNIYetlhAGQISVNYKLTAE 514
Cdd:cd01347 329 ----------ELDEKQTALYAQDTIELTDDLTLTLGLRYDHYDQDSKDTIAGGTTAKKSYSHW----SPSLGLVYKLTDG 394
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 515 LTSYitGNYNEA----TSNSMAGGNVLGSDNQISAQNFA---TDNtlAEIGLKFSPtDSPWYVDAALF-NQRRSLRNRDG 586
Cdd:cd01347 395 LSLY--ASYSQGfrapSLGELYGGGSHGGTAAVGNPNLKpekSKQ--YELGLKYDP-GDGLTLSAALFrIDIKNEIVSTP 469
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 587 SNTGI------------RTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSASSQDSNqvadafdnsrpdiingtgigapn 653
Cdd:cd01347 470 TNTGLglvtvyvnggkaRIRGVELEASYDLTDGLgLTGSYTYTDTEVKRTDGATTGN----------------------- 526
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 654 fasfppstrRVQGIPEQSFSFNSGFSIT-PQWDIGLGGIYTKSYPLDFLA---TVRIRDQYTLNVNTRYAFSEQTSLRLD 729
Cdd:cd01347 527 ---------RLPGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTANgnnTVKVPGYTLVDLSASYQFTKNLTLRLG 597
|
730
....*....|....*...
gi 2189084700 730 ITNVTNQDNWRPVFEGGY 747
Cdd:cd01347 598 VNNLFDKDYYTSLSVRGS 615
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
49-727 |
2.39e-26 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 114.57 E-value: 2.39e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITP--NSYSASGFGNPSLPTLRGQLGE---LFQDGVRRQAGNNGFGIPISF 123
Cdd:COG4771 41 LSDAPASVSVITAEEIEKLGATDLADALRLLPgvSVTRSGGRGGSSGISIRGLGGDrvlVLIDGVPVNNPALGGGGDLSY 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 124 ---NAIEQIDVVKGAPPVLFGsSQRNGGFVNLSSKKANTEQsQGKLVLSAGRWDHYSAQLDYTAPIVEGKSGFRVSAEHI 200
Cdd:COG4771 121 ippDDIERIEVIRGPASALYG-SDAIGGVINIITKKPTDEL-EGSVSLGYGSNGNGTYSGSLSLGGPGDKLSFLLSGSYR 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 201 DNGSFYDF--------SGYKSDSLFAAVRFLPDAQSSLDINFELYQVEFTDNAGINRPTQALIDDGlyitgqgiqpngst 272
Cdd:COG4771 199 DRDGYLDYrnggfvgnSGYERYNLNAKLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNA-------------- 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 273 iagagaiisptgqvriprnrvlTDPDNINEATTYLLHsiYKRELNDKttLKNTTYFQHLQREEIAQNSFVEIIDGADTAQ 352
Cdd:COG4771 265 ----------------------GDRDTTTDRGNYSLR--YNGDLGDN--LDLSLYYSRTDRDSTNGSLGGSTGSFSDSDD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 353 NRTELSYQWNdsqssifafdvrfnkvkgfsqftteadlpidltgpienrrIPLTTEQKARLvelkpgvfvspGAQYDLDN 432
Cdd:COG4771 319 TTYGLELDLT----------------------------------------YPLGGNHTLTL-----------GAEYRYDD 347
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 433 DGVGDFSLSDTTDSTSWQtglAFVHDS-QWTEKLRTSLGYRLDYYDVeardpiapqgqvaARDNIYETLhAGQISVNYKL 511
Cdd:COG4771 348 LDSSSFLGGADASRDTYG---LFAQDEwKLTDKLTLTAGLRYDYYST-------------FGASNYTAF-SPRLGLRYDL 410
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 512 TAELTsyITGNYNEAT-----SNSMAGGNVLGSDNQISAQNF-ATDNTLAEIGLKFSPTDSPWYVDAALFNQR------- 578
Cdd:COG4771 411 SDNLT--LRASYGRGFrapslAELYGSGTGTPGRYVLGNPDLkPETSDNYELGLEYRLGNGGLSLSLTGFYTDikdlivl 488
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 579 RSLRNRDGSNTG------IRTKGFETQVFYDAGQYW-FNAGYSYIDARYDNSAssqdsnqvadafdnsrpdiingtgiga 651
Cdd:COG4771 489 VPVGPGPGDVLQyenvgkARTYGLELELKYRLGKGLtLTASYTYLDSKIDDGD--------------------------- 541
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2189084700 652 pnfasfppSTRRVQGIPEQSFSFNSGFSITPQWDIGLGGIYTKSYPLDFLATVR---IRDQYTLNVNTRYAFSEQTSLR 727
Cdd:COG4771 542 --------TGEPLPNVPPHKANLGLDYRLPKWWLLLLLTRYYGGRYVTPPSGRLegyTPGYTLLDLRASYKLTKNLTLS 612
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
51-740 |
2.48e-26 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 114.82 E-value: 2.48e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 51 DIARSVTPITREMIEQLNITTLQDILSITPNSY--SASGFGNPSLPTLRGQLGELFQDGVR----RQAGNNGFGIPISFN 124
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQQAGSLSEALQRVPGVVvgGSGGTTQFGNITIRGFGLEVDIDNVYldgvPLLSRGNLAIVDPAM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 125 aIEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKANTEQsQGKLVLSAGRWDHYSAQLDYTAPI-VEGKSGFRVSAEHIDNG 203
Cdd:TIGR01783 81 -VERVEVLRGPASLLYGGSA-PGGVINIVTKRPQDEP-KGSVTFGAGTRSGYRTAFDLGGPLgADGTFRGRLNGARQDGD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 204 SFYDFSGYKSDSLFAAVRFLPDAQSSLDINFElYQVEFTDnaginrptqaliddglyiTGQGIQPNGSTIAGAgaiispt 283
Cdd:TIGR01783 158 SFYDGAGEETRLGATATDWQLDDRTLLRLGAY-YQKERDR------------------GGYGGLPASGGTSGR------- 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 284 gqvRIPRNRVLTDPDNINEATTYLLHSIY--KRELNDKTTLKNTTYFQHLQreeiaQNSFVEIIDGADTAQNRTELSYQW 361
Cdd:TIGR01783 212 ---DLSSDRYLGTSSNRNYDDREYLSYGLslEYQFNDVWTGKQNLRYSYFD-----TDSNQVQASGYSSDGGLFGRSLTV 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 362 NDSQSSIFAFDVRFNkvkgfSQFTTeADLPIDLTGPIENRRIPLTTEQKARLVELK---PGVFVSPGAQYDLdndgvgDF 438
Cdd:TIGR01783 284 VNVKQDRVQIDAGLD-----GEFET-GPIEHDLLLGVSYGQRTTNRFNNTGYPSDNiysLTATSSARTDIGD------SP 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 439 SLSDTTDSTSWQTGLAfVHDSQWTEKLRTSLGYRLDYYDVEARDPIAPQgqvaARDNIYETLhAGQISVNYKLTAELTSY 518
Cdd:TIGR01783 352 KDRALSSTTKALNGVA-LQRILLADKWTLTLGGRYDSVDVKSNNGVAGS----TGKRDDSQF-TPSLGVAYKPTDDWSLY 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 519 itGNYNEA-TSNSMAGGNVLGSDNQISAQNfaTDNTlaEIGLKFSPTDSpWYVDAALFNQRRSLRNRDGSNTG------- 590
Cdd:TIGR01783 426 --ASYAESfKPGGYYPKGAGNSGDILEPEK--GKNY--ELGVRYDLGDS-LLATAALFRITKDNQLVQDPVNGtfsvnag 498
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 591 -IRTKGFETQVFYDAGQYW-FNAGYSYIDARYdNSASSQDSNQvadafdnsrpdiingtgigapnfasfppstRRVQGIP 668
Cdd:TIGR01783 499 kTRNRGVELEARGYLTPGLsLSAGYTYTDAEF-TEDTNGDTQG------------------------------NTVPFVP 547
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2189084700 669 EQSFSFNSGFSITPQWD---IGLGGIYTKSYPLDFLATVRIRDQYTLNVNTRYAF--SEQTSLRLDITNVTNQDNWR 740
Cdd:TIGR01783 548 KHTASLWASYAPPVGDNgltLGGGVQYTGKAYVDGGNTGKVPSYTVVDLSVRYDLtkKKNLTLALNVNNLFDRDYYT 624
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
4-753 |
1.34e-25 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 112.71 E-value: 1.34e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 4 CASFVSLATENNEIEVIQISGEQLKNTQispkdtpingpfgddlfLQDIARSVTPITREMIEQLNITTLQDILSITP--N 81
Cdd:COG4772 10 LLAAAAAAEAATTLETVVVTGSRAAEAR-----------------LKDVPGSVSVVDREELENQAATSLREVLRRVPgvN 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 82 SYSASGFGN-PSLpTLRGQlgelfqdGVRRQAGNNGF--GIPISF--------------NAIEQIDVVKGAPPVLFGsSQ 144
Cdd:COG4772 73 VQEEDGFGLrPNI-GIRGL-------GPRRSRGITLLedGIPIAPapygdpaayyfpdlERMERIEVLRGAAALRYG-PQ 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 145 RNGGFVNLSSKKANTEQSqGKLVLSAGRWDHYSAQLDYTApiVEGKSGFRVSAEHIDNGSFYDFSGYKSDSLFAAVRFLP 224
Cdd:COG4772 144 TVGGAINFVTRTIPTAFG-GELRVTGGSFGYRRTHASVGG--TVGNFGYLVEYSRKRGDGFRDNSGFDINDFNAKLGYRL 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 225 DAQSSLDinFELYQVEFTDNaginrptqaliddglyitgqgiQPNGSTIAgagaiisptgQVRIPRNRVLTDPDNINeAT 304
Cdd:COG4772 221 SDRQELT--LKFQYYDEDAN----------------------TPGGLTDA----------QFDADPRQSYRPADQFD-TR 265
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 305 TYLLHSIYKRELNDKTTLKNTTYFQHLQReeiaqNSFveiIDGADTAQNRTELSYQWNDSQSSIFAFDVRFNkvkgfSQF 384
Cdd:COG4772 266 RTQLSLRYEHQLSDNTTLTTTAYYNDFSR-----NWY---IRQNTADPNTPGLGLRGNPRGYRSYGIEPRLT-----HRF 332
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 385 TTeADLPIDLT-------GPIENRRIPLTTEQKARlvelkpgvfvspGAQYDLDNDgvgdfslsDTTDSTSwqtglAFVH 457
Cdd:COG4772 333 EL-GGVPHTLEvglryhrEEEDRKQYVNTYGQGRS------------GAGLRRDRR--------FSADALA-----AYAQ 386
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 458 DS-QWTEKLRTSLGYRLDYYDVEARD-PIAPQGQVAARDNIYETLHAGqISVNYKLTAELTSY--ITGNYNEATSNSMAG 533
Cdd:COG4772 387 NRfELTGRLTLTPGLRYEHIRRDRTDrYSTRTGGDDSGSNSYSEFLPG-LGLLYQLTDNLQLYanVSRGFEPPTFGDLAY 465
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 534 GNvlGSDNQISAQNFATdntlAEIGLKFSPTDSpWYVDAALF-----NQRRSLRNRDGSNTG------IRTKGFETQVFY 602
Cdd:COG4772 466 GN--GGNPDLKPEKSWN----YELGTRGRIGNG-LSAEVALFyidydNELGSCSAAGGDRSTftnageTRHQGLELALDY 538
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 603 DAGQYW-----FNAGYSYIDARydnsassqdsnqvadaFDNSRPDIINGtgigapnfasfppstRRVQGIPEQSFSFNSG 677
Cdd:COG4772 539 DLLKGGglglpLFAAYTYTDAE----------------FTSDFGPVFAG---------------NRLPYVPRHQLTAGLG 587
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 678 FSiTPQWDIGLGGIYTKSYPLDFLATVRIR-----DQYTL-NVNTRYAFSEQTSLRLDITNVTNQDnwrpvfeggYFGST 751
Cdd:COG4772 588 YE-HGGWTANLNGRYVSEQFTDAANTVADGsfgkiPSYTVlDLSASYDFGKNLSLFAGVNNLFDKR---------YIASR 657
|
..
gi 2189084700 752 LV 753
Cdd:COG4772 658 AP 659
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
49-238 |
8.69e-15 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 75.29 E-value: 8.69e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITP--NSYSASGFGNPSLPTLRGQLGE---LFQDGVR-RQAGNNGFGI-PI 121
Cdd:COG4206 12 KSDLTGSVTVIDAEELERSGATSLADALRRVPgvQVSSSGGPGSAASISIRGLGSNqtlVLIDGVPlNDPSLGGVDLsLI 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 122 SFNAIEQIDVVKGAPPVLFGSSQRnGGFVNLSSKKAnTEQSQGKLVLSAGRWDHYSAQLDYTAPIveGKSGFRVSAEHID 201
Cdd:COG4206 92 PPDDIERIEVLKGAASALYGSDAI-GGVINITTKKG-KKGFKGSVSASYGSFGTRRLSASLSGGA--GKFSYSLSASYRR 167
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2189084700 202 -------NGSFYDFSGYKSDSLFAAVRFLPDAQSSLDINFELYQ 238
Cdd:COG4206 168 sdgyrynDPDLRNNDGYENTSLNARLGYKLGDNGSLSLSGGYSD 211
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
49-143 |
4.87e-13 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 65.75 E-value: 4.87e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPN-SYSASGFGNPSLPTLRGQLGE---LFQDGVRRQAGNNGFGI--PIS 122
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQGATNLADALRGVPGvSVSSGGGGGGSSISIRGFGSNrvlVLVDGVPLNSGGGGSVDlnSID 81
|
90 100
....*....|....*....|.
gi 2189084700 123 FNAIEQIDVVKGAPPVLFGSS 143
Cdd:pfam07715 82 PEDIERVEVLKGPASALYGSG 102
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
241-755 |
7.65e-13 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 71.34 E-value: 7.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 241 FTDNAGINRPTQALIDDGLYITGQGIQPNGSTIAGAGAIISPTGQVRIPRNRVLTDPDNINEATTYLLHsiYKRELNDKT 320
Cdd:pfam00593 2 WQLSLDLLGDDTLLTLGYDYSRYTDGLDLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYD--LGDGLSWLS 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 321 TLKNTTYFQHLQREEIAQNSFveiIDGADTAQNRTELSYQWNDSQSSIFAFDVRFNKVKGFSQFTTEADLpidltgpien 400
Cdd:pfam00593 80 TLRLGLRYSSLDGDYTSNSSG---LSGAGDYLSDDRLYGLYGLDGDLELSLDLSHDLLLGVELRTAGLDY---------- 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 401 rripltteqkarlvelkpgvfvSPGAQYDLDNDGVGDFSLSDTTDSTSWQTGLAFVHDSQWTEKLRTSLGYRLDYYDVEA 480
Cdd:pfam00593 147 ----------------------RRLDDDAYDPYDPANPSSSSYSDTTTDSYGLYLQDNIKLTDRLTLTLGLRYDHYSTDG 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 481 RDPIAPQGQVAARDNIYetlhAGQISVNYKLTAELT---SYITGnYNEATSNSMAGGNVLGSDNQISAQNF---ATDNTL 554
Cdd:pfam00593 205 DDGNGGGDNFSRSYSAF----SPRLGLVYKPTDNLSlyaSYSRG-FRAPSLGELYGSGSGGGGGAVAGGNPdlkPETSDN 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 555 AEIGLKFSPTDspWYVDAALFNQRRS----LRNRDGSNTG----------IRTKGFETQVFYDA-GQYWFNAGYSYIDAR 619
Cdd:pfam00593 280 YELGLKYDDGR--LSLSLALFYIDIKnlitSDPDGPGLGGtvytytnvgkARIRGVELELSGRLwGLGLSGGGYTYTDAD 357
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 620 YDNSASSQDsnqvadafdnsrpdiingtgigapnfasfppstRRVQGIPEQSFSFNSGFSITPQ-WDIGLGGIYT---KS 695
Cdd:pfam00593 358 DDADADDTG---------------------------------NPLPNVPRHTANLGLTYDFPLGgWGARLGARYVgsgER 404
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 696 YPLDFLATVRIRDQYTLNVNTRYAFSEQTSLRLDITNVTNQDNWRPVFEGGYFGSTLVFP 755
Cdd:pfam00593 405 RYGDAANTFKTPGYTLVDLSAGYRLNKNLTLRLGVNNLFDKYYKRYYSSGGGNLGGYPGP 464
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
50-220 |
1.40e-05 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 48.71 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 50 QDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGNPSLPTLRG-QLGELFQDGVRRQAGNN-GFGIPISFNAI- 126
Cdd:PRK10003 76 RDIPQSVSIVSQQRMEDQQLQTLGEVMENTLGISKSQADSDRALYYSRGfQIDNYMVDGIPTYFESRwNLGDALSDTALf 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 127 EQIDVVKGAPPVLFGSSQRNgGFVNLSSKKANTEQSQGKLVLSAGRWDHYSAQLDYTAPIVE-GKSGFRVSAEHIDNGSF 205
Cdd:PRK10003 156 ERVEVVRGATGLMTGTGNPS-AAINMVRKHATSREFKGDVSAEYGSWNKQRYVADLQSPLTEdGKVRARIVAGYQNNDSW 234
|
170
....*....|....*
gi 2189084700 206 YDFSGYKSDSLFAAV 220
Cdd:PRK10003 235 LDRYNSEKTFFSGIV 249
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
49-195 |
1.54e-05 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 48.46 E-value: 1.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITpNSYSASGFGNPSLPTLRGQLGE---LFQDGvRRQAGN----NGFG--- 118
Cdd:PRK13484 44 LRNAPASVSVITSEQLQKKPVSDLVDAVKDV-EGISITGGNEKPDISIRGLSGDytlILVDG-RRQSGResrpNGSGgfe 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 119 ---IPiSFNAIEQIDVVKGAPPVLFGSSQRnGGFVNLSSKKANTEQSQGKLVLSAGRWDHY----SAQLDY--TAPIVEG 189
Cdd:PRK13484 122 agfIP-PVEAIERIEVIRGPMSSLYGSDAI-GGVINIITKPVNNQTWDGVLGLGGIIQEHGkfgnSTTNDFylSGPLIKD 199
|
....*.
gi 2189084700 190 KSGFRV 195
Cdd:PRK13484 200 KLGLQL 205
|
|
| PRK09840 |
PRK09840 |
catecholate siderophore receptor Fiu; Provisional |
49-636 |
2.68e-05 |
|
catecholate siderophore receptor Fiu; Provisional
Pssm-ID: 182105 [Multi-domain] Cd Length: 761 Bit Score: 47.88 E-value: 2.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITP--NSYSASGFGNPSLPT---LRG--QLGELFQDGVRRQAGnngfgipI 121
Cdd:PRK09840 68 LADTTQTITVISEQVIKDQGATNLTEALRNVPgvGTFFAGENGNTTTGDaiyMRGfdTSNSIYVDGIRDIGS-------I 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 122 S---FNaIEQIDVVKGAPPVLFGSSQRNGGfVNLSSKKANTEQSQGKlVLSAGRWDHYSAQLDYTAPIVEGkSGFRVSA- 197
Cdd:PRK09840 141 SrdtFN-TEQVEVIKGPSGTDYGRSAPTGS-INMISKQPRNDSGIDA-SASIGSAWFRRGTLDVNQVIGDT-TAVRLNVm 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 198 ---------EHIDNGSFydfsgyksdSLFAAVRFLPDAQSSLDINFELYQVEFTDNAGInrPTQALiddglyitgqgiqP 268
Cdd:PRK09840 217 gekthdagrDKVKNERY---------GVAPSVAFGLGTANRLYLNYLHVTQNNTPDGGI--PTIGL-------------P 272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 269 NGSTIAGAGAIISPTGQVRiPRNRVLTDPDnINEATTYLLHSIYKRELNDKTTLKNTTYFQHLQREEIaqnsFVEIIDGA 348
Cdd:PRK09840 273 GYSAPSAGRAALNHAGKVD-THNFYGTDSD-YDDSTTDTATMRFEHDINDNTTLRNTTRWSRVKQDYL----LTAIMGGA 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 349 DTAQNRTEL---SYQWNdsqSSIFAFDVRfNKVkgfsqFTTEADLPIDL-TGPIENRR---IPLTTEQKARL-------- 413
Cdd:PRK09840 347 SNITTPTPSdvnTWTWS---RTANTKDVS-NKI-----LTNQTNLTSTFyTGSIGHDVstgVEFTRETQTNYgvnpvtlp 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 414 -VEL-KPGVFVSPGAqydLDNDGVGDFSLSDTTDSTSWQTglafvhdSQWTEKLRTSLGYRLDYYDVEARDPIAPQGqvA 491
Cdd:PRK09840 418 aVNLyHPDSSIHPGG---LTRNGANANGQTDTFAIYAFDT-------LQLTRDWELNGGIRLDNYHTEYDSATACGG--S 485
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 492 ARDNIYETLHAGQIS-------------VN------YKLTAELTSYItgNYneATSNSMAGGNVL-----GSDNQISAQN 547
Cdd:PRK09840 486 GRGAITCPAGVAKGSpvttvdtaksgnlVNwkagalYKLTENGNVYI--NY--AVSQQPPGGSNFalaqsGSGNSANRTD 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 548 FATDNT-LAEIGLKFSPTDSPWYVDAALFN---QRRSLRNRDG--SNTG-IRTKGFETQVFYDAGQYW-FNAGYSYIDAR 619
Cdd:PRK09840 562 FKPQKAnTSEIGTKWQVLDKRLLLTAALFRtdiENEVEQNDDGtySQYGkKRVEGYELSVAGNITPAWqVIAGYTQQKAT 641
|
650 660
....*....|....*....|...
gi 2189084700 620 YDN-SASSQD-SNQVA----DAF 636
Cdd:PRK09840 642 VKNgKDVAQDgSSSLPytpeHAF 664
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
49-272 |
4.08e-05 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 47.07 E-value: 4.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGfGNPSLPTLRGQLGE---LFQDGVR---RQAGNN--GFGI- 119
Cdd:PRK13513 49 IQDAPASISVVTREQLENKAYRDVTDALKDVPGVVVTGG-GSTSDISIRGMAAKytlILVDGKRvdtRSTRPNsdGSGIe 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 120 -----PISfnAIEQIDVVKGAPPVLFGSSQRnGGFVNLSSKKANTE-----QSQGKLVLSAGRWDHYSAQLDYTAPIVEG 189
Cdd:PRK13513 128 qgwlpPLA--AIERIEVVRGPMSSLYGSDAM-GGVINIITRKVQKEwhgslRADATLQEDSKSGDIFQTNAYASGPLIDG 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 190 KSGFRVSA--EHIDNGSFYDfsGYKSDSL---FAAVRFLPDAQSSLDINFELYQVEFTDNAGINRPTQALIDDGLY---- 260
Cdd:PRK13513 205 LLGLKVSGllSHRSEDKIID--GYNEQRMrngTATFSLTPDDNNEFDFEIGRYVQDRNSTPGRTLALNGTNSDTQYdrnn 282
|
250
....*....|....
gi 2189084700 261 --ITGQGIQPNGST 272
Cdd:PRK13513 283 yaITHNGYYDFGNS 296
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
33-160 |
4.50e-03 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 40.55 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 33 SPKDTPINgpfgddlflqDIARSVTPITREMIEQLNITT-LQDILSITPNSYSASgFGNPSLPT---LRG----QLGeLF 104
Cdd:PRK14050 70 SKTDTPIT----------EIPQSVSVVGRQEMDDRGVTNkVDEALRYTPGVLSQP-FGTDGDTDwfyIRGfdatQTG-VF 137
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2189084700 105 QDGVrrQAGNNGFG-IPISFNAIEQIDVVKGAPPVLFGSSQrNGGFVNLSSKKANTE 160
Cdd:PRK14050 138 LDGL--NLFSYGFGgFQIDPFMLERVEVLKGPASVLYGGSN-PGGIVNMVSKRPLDE 191
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
49-195 |
8.49e-03 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 39.48 E-value: 8.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 49 LQDIARSVTPITREMIEQLNITTLQDILSITPNSYSASGFGNPSLPTLRG---QLGELFQDGVRRQAGN-----NGFG-- 118
Cdd:PRK10064 44 LKDAPASISVITQEDLQRKPVQNLKDVLKEVPGVQLTNEGDNRKGVSIRGldsSYTLILIDGKRVNSRNavfrhNDFDln 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2189084700 119 -IPIsfNAIEQIDVVKGAPPVLFGSSQRnGGFVNLSSKKANtEQSQGKLVLSA------GRWDHYSAQLDYTAPIVEGKS 191
Cdd:PRK10064 124 wIPV--DAIERIEVVRGPMSSLYGSDAL-GGVVNIITKKIG-QKWHGTVTVDTtiqehrDRGDTYNGQFFTSGPLIDGVL 199
|
....
gi 2189084700 192 GFRV 195
Cdd:PRK10064 200 GMKA 203
|
|
| |
