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Conserved domains on  [gi|2199933183|ref|WP_239857783|]
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DUF2799 domain-containing protein [Laribacter hongkongensis]

Protein Classification

DUF2799 domain-containing protein( domain architecture ID 10567071)

DUF2799 domain-containing protein similar to Escherichia coli YfiL

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2799 pfam10973
Protein of unknown function (DUF2799); Some members in this family of proteins are annotated ...
 36-118 9.87e-29

Protein of unknown function (DUF2799); Some members in this family of proteins are annotated as yfiL which has no known function.


:

Pssm-ID: 431568  Cd Length: 86  Bit Score: 100.86  E-value: 9.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199933183  36 QLGLQDGSNGYTLARLQSRVQACAKYGVPFNEQAWMQGYRQGLAEFCTPQGGEAAGLSGQPYvPGTCPAASEPDFLAAYR 115
Cdd:pfam10973   4 QIGYEDGMAGKTASRLERLREACADVGVTPDAAAYLKGYQKGLEEYCTPDNGYALGLSGKSY-PGVCPGDLNAEFLKGYQ 82


                  ...
gi 2199933183 116 PAY 118
Cdd:pfam10973  83 KGR 85
 
Name Accession Description Interval E-value
DUF2799 pfam10973
Protein of unknown function (DUF2799); Some members in this family of proteins are annotated ...
 36-118 9.87e-29

Protein of unknown function (DUF2799); Some members in this family of proteins are annotated as yfiL which has no known function.


Pssm-ID: 431568  Cd Length: 86  Bit Score: 100.86  E-value: 9.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199933183  36 QLGLQDGSNGYTLARLQSRVQACAKYGVPFNEQAWMQGYRQGLAEFCTPQGGEAAGLSGQPYvPGTCPAASEPDFLAAYR 115
Cdd:pfam10973   4 QIGYEDGMAGKTASRLERLREACADVGVTPDAAAYLKGYQKGLEEYCTPDNGYALGLSGKSY-PGVCPGDLNAEFLKGYQ 82


                  ...
gi 2199933183 116 PAY 118
Cdd:pfam10973  83 KGR 85
 
Name Accession Description Interval E-value
DUF2799 pfam10973
Protein of unknown function (DUF2799); Some members in this family of proteins are annotated ...
 36-118 9.87e-29

Protein of unknown function (DUF2799); Some members in this family of proteins are annotated as yfiL which has no known function.


Pssm-ID: 431568  Cd Length: 86  Bit Score: 100.86  E-value: 9.87e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2199933183  36 QLGLQDGSNGYTLARLQSRVQACAKYGVPFNEQAWMQGYRQGLAEFCTPQGGEAAGLSGQPYvPGTCPAASEPDFLAAYR 115
Cdd:pfam10973   4 QIGYEDGMAGKTASRLERLREACADVGVTPDAAAYLKGYQKGLEEYCTPDNGYALGLSGKSY-PGVCPGDLNAEFLKGYQ 82


                  ...
gi 2199933183 116 PAY 118
Cdd:pfam10973  83 KGR 85
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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