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Conserved domains on  [gi|2200023959|ref|WP_239937688|]
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AAC(3) family N-acetyltransferase [Vibrio chagasii]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Antibiotic_NAT super family cl01051
Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside ...
29-197 2.19e-25

Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.


The actual alignment was detected with superfamily member pfam02522:

Pssm-ID: 470047  Cd Length: 232  Bit Score: 99.99  E-value: 2.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  29 LIHSnirrtlvSYRKKG-IKLSAEDILDTFIEAVGVNGTLLFPLF----------NFNFPKDKF---------FDFNTTP 88
Cdd:pfam02522   1 LVHS-------SLSSLGwVEGGAETVIDALLDALGPEGTLVMPTHtgdsdpapweNPPVPEEWWdtireempaFDPARTP 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  89 SQ-MGALTEAARLHHASVRTGHPIYSFAVIGKKSHLF-DNVDNRSGYGADSPFSLLRDLDGKI---GSldleDQNSMTFY 163
Cdd:pfam02522  74 SRgMGILAETFRTWPGVVRSAHPTHSFAAWGPDAEEItAGHPLDTPLGEGSPLGRLYDLDGKVlllGV----GFDRNTSL 149
                         170       180       190
                  ....*....|....*....|....*....|....
gi 2200023959 164 HHVEEMEQVDYRYFKDFSGTYVDKNGVESQRTYQ 197
Cdd:pfam02522 150 HLAEYRADIPGRRYVRPGAPVIVPDGKRVWVHYE 183
 
Name Accession Description Interval E-value
Antibiotic_NAT pfam02522
Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside ...
29-197 2.19e-25

Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.


Pssm-ID: 426815  Cd Length: 232  Bit Score: 99.99  E-value: 2.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  29 LIHSnirrtlvSYRKKG-IKLSAEDILDTFIEAVGVNGTLLFPLF----------NFNFPKDKF---------FDFNTTP 88
Cdd:pfam02522   1 LVHS-------SLSSLGwVEGGAETVIDALLDALGPEGTLVMPTHtgdsdpapweNPPVPEEWWdtireempaFDPARTP 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  89 SQ-MGALTEAARLHHASVRTGHPIYSFAVIGKKSHLF-DNVDNRSGYGADSPFSLLRDLDGKI---GSldleDQNSMTFY 163
Cdd:pfam02522  74 SRgMGILAETFRTWPGVVRSAHPTHSFAAWGPDAEEItAGHPLDTPLGEGSPLGRLYDLDGKVlllGV----GFDRNTSL 149
                         170       180       190
                  ....*....|....*....|....*....|....
gi 2200023959 164 HHVEEMEQVDYRYFKDFSGTYVDKNGVESQRTYQ 197
Cdd:pfam02522 150 HLAEYRADIPGRRYVRPGAPVIVPDGKRVWVHYE 183
YokD COG2746
Aminoglycoside N3'-acetyltransferase [Defense mechanisms];
21-205 9.29e-22

Aminoglycoside N3'-acetyltransferase [Defense mechanisms];


Pssm-ID: 442043  Cd Length: 256  Bit Score: 91.03  E-value: 9.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  21 GISQGDTVLIHSNIRRtlVSYRKKGiklsAEDILDTFIEAVGVNGTLLFPLFNFNFPKDKF------------------- 81
Cdd:COG2746    15 GVRPGDTVLVHSSLSS--LGWVCGG----AQAVIEALLDVVGPEGTLVMPTQSGDNSDPATwenppvpeewwetiraemp 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  82 -FDFNTTPSQ-MGALTEAARLHHASVRTGHPIYSFAVIGKK-SHLFDNVDNRSGYGADSPFSLLRDLDGKI---GSldle 155
Cdd:COG2746    89 aFDPATTPTRgMGAIPETFRTWPGVVRSDHPQASFAAWGPDaEEITADHPLDYGLGEGSPLARLYELDGKVlllGV---- 164
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2200023959 156 DQNSMTFYHHVEEMEQVDYRYFKDFsGTYVDKNGVESQRTYQLFVRDLER 205
Cdd:COG2746   165 GYDTNTSLHLAEYRADAPGKRTVRY-GAPILEDGERVWVEFEDIDTDSDD 213
 
Name Accession Description Interval E-value
Antibiotic_NAT pfam02522
Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside ...
29-197 2.19e-25

Aminoglycoside 3-N-acetyltransferase; This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.


Pssm-ID: 426815  Cd Length: 232  Bit Score: 99.99  E-value: 2.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  29 LIHSnirrtlvSYRKKG-IKLSAEDILDTFIEAVGVNGTLLFPLF----------NFNFPKDKF---------FDFNTTP 88
Cdd:pfam02522   1 LVHS-------SLSSLGwVEGGAETVIDALLDALGPEGTLVMPTHtgdsdpapweNPPVPEEWWdtireempaFDPARTP 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  89 SQ-MGALTEAARLHHASVRTGHPIYSFAVIGKKSHLF-DNVDNRSGYGADSPFSLLRDLDGKI---GSldleDQNSMTFY 163
Cdd:pfam02522  74 SRgMGILAETFRTWPGVVRSAHPTHSFAAWGPDAEEItAGHPLDTPLGEGSPLGRLYDLDGKVlllGV----GFDRNTSL 149
                         170       180       190
                  ....*....|....*....|....*....|....
gi 2200023959 164 HHVEEMEQVDYRYFKDFSGTYVDKNGVESQRTYQ 197
Cdd:pfam02522 150 HLAEYRADIPGRRYVRPGAPVIVPDGKRVWVHYE 183
YokD COG2746
Aminoglycoside N3'-acetyltransferase [Defense mechanisms];
21-205 9.29e-22

Aminoglycoside N3'-acetyltransferase [Defense mechanisms];


Pssm-ID: 442043  Cd Length: 256  Bit Score: 91.03  E-value: 9.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  21 GISQGDTVLIHSNIRRtlVSYRKKGiklsAEDILDTFIEAVGVNGTLLFPLFNFNFPKDKF------------------- 81
Cdd:COG2746    15 GVRPGDTVLVHSSLSS--LGWVCGG----AQAVIEALLDVVGPEGTLVMPTQSGDNSDPATwenppvpeewwetiraemp 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200023959  82 -FDFNTTPSQ-MGALTEAARLHHASVRTGHPIYSFAVIGKK-SHLFDNVDNRSGYGADSPFSLLRDLDGKI---GSldle 155
Cdd:COG2746    89 aFDPATTPTRgMGAIPETFRTWPGVVRSDHPQASFAAWGPDaEEITADHPLDYGLGEGSPLARLYELDGKVlllGV---- 164
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2200023959 156 DQNSMTFYHHVEEMEQVDYRYFKDFsGTYVDKNGVESQRTYQLFVRDLER 205
Cdd:COG2746   165 GYDTNTSLHLAEYRADAPGKRTVRY-GAPILEDGERVWVEFEDIDTDSDD 213
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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