|
Name |
Accession |
Description |
Interval |
E-value |
| ARO8 |
COG1167 |
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain ... |
1-474 |
2.09e-168 |
|
DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain [Transcription, Amino acid transport and metabolism]; DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain is part of the Pathway/BioSystem: Lysine biosynthesis
Pssm-ID: 440781 [Multi-domain] Cd Length: 471 Bit Score: 482.79 E-value: 2.09e-168
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 1 MSQVISRSNSEFLYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLkssq 80
Cdd:COG1167 1 MLIRLDRDSSGPLYLQLADALREAILSGRLPPGDRLPSSRELAAQLGVSRSTVVRAYEELEAEGLIESRPGSGTFV---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 81 lNQSRPKRVRLSREPTTVNKQGLIEQVYGAihkANVVPFGIANPVAAAPTDKALARTMRRVMTLAGASAINYGPMDGFAP 160
Cdd:COG1167 77 -AARLPAPAPAPRAAAAVAAPALRRLLEAA---PGVIDLGSGAPDPDLFPLAALRRALRRALRRLPPALLGYGDPQGLPE 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 161 LKKQLIHRYLDFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCpDEGIWLD 240
Cdd:COG1167 153 LREAIARYLARRGVPASPDQILITSGAQQALDLALRALLRPGDTVAVESPTYPGALAALRAAGLRLVPVPVD-EDGLDLD 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 241 DLAQALDEHDIKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCAS 320
Cdd:COG1167 232 ALEAALRRHRPRAVYVTPSHQNPTGATMSLERRRALLELARRHGVPIIEDDYDSELRYDGRPPPPLAALDAPGRVIYIGS 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 321 FSKTAAPSYRIGWIIA-GKFAEQARRHKRALSCSAPLINQWTLYEFIASGEYDRNIRLLRQRLSTNKERMIWCLQQYMPS 399
Cdd:COG1167 312 FSKTLAPGLRLGYLVApGRLIERLARLKRATDLGTSPLTQLALAEFLESGHYDRHLRRLRREYRARRDLLLAALARHLPD 391
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 400 CARISNPQGGCVIWVDLGSQYDAVKLFHLALEAGISITPGLIFSAGKKYRSCFRLSYGLPWSENLEQAIKTLSQL 474
Cdd:COG1167 392 GLRVTGPPGGLHLWLELPEGVDAEALAAAALARGILVAPGSAFSADGPPRNGLRLGFGAPSEEELEEALRRLAEL 466
|
|
| AAT_like |
cd00609 |
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent ... |
117-473 |
5.63e-73 |
|
Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a, b and c, Tyrosine, Alanine, Aromatic-amino-acid, Glutamine phenylpyruvate, 1-Aminocyclopropane-1-carboxylate synthase, Histidinol-phosphate, gene products of malY and cobC, Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein.
Pssm-ID: 99734 [Multi-domain] Cd Length: 350 Bit Score: 234.16 E-value: 5.63e-73
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 117 VPFGIANPVAAAPTDKALARtmrrVMTLAGASAINYGPMDGFAPLKKQLIHRY-LDFGIGVDSDELVITNGAQEALAIAL 195
Cdd:cd00609 1 IDLSIGEPDFPPPPEVLEAL----AAAALRAGLLGYYPDPGLPELREAIAEWLgRRGGVDVPPEEIVVTNGAQEALSLLL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 196 KCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWLD-DLAQALDEHDIKACVFsTSLNNPVGSFMPDAKRE 274
Cdd:cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDlELLEAAKTPKTKLLYL-NNPNNPTGAVLSEEELE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 275 QLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKT-AAPSYRIGWIIA--GKFAEQARRHKRALS 351
Cdd:cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTfGLPGLRIGYLIAppEELLERLKKLLPYTT 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 352 CSAPLINQWTLYEFIASGEydRNIRLLRQRLSTNKERMIWCLQQYMPSCARIsnPQGGCVIWVDLGSQYDAVKLFHLALE 431
Cdd:cd00609 236 SGPSTLSQAAAAAALDDGE--EHLEELRERYRRRRDALLEALKELGPLVVVK--PSGGFFLWLDLPEGDDEEFLERLLLE 311
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2200057096 432 AGISITPGLIFsaGKKYRSCFRLSYGLPwSENLEQAIKTLSQ 473
Cdd:cd00609 312 AGVVVRPGSAF--GEGGEGFVRLSFATP-EEELEEALERLAE 350
|
|
| AspB |
COG0436 |
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; ... |
115-474 |
2.08e-47 |
|
Aspartate/methionine/tyrosine aminotransferase [Amino acid transport and metabolism]; Aspartate/methionine/tyrosine aminotransferase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis
Pssm-ID: 440205 [Multi-domain] Cd Length: 387 Bit Score: 168.00 E-value: 2.08e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 115 NVVPFGIANPVAAAPTD--KALARTMRRVMTlagasaiNYGPMDGFAPLKKQLIHRYL-DFGIGVDSDELVITNGAQEAL 191
Cdd:COG0436 31 DVIDLGIGEPDFPTPDHirEAAIEALDDGVT-------GYTPSAGIPELREAIAAYYKrRYGVDLDPDEILVTNGAKEAL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 192 AIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGiW---LDDLAQALDEhDIKACVFStSLNNPVGSFM 268
Cdd:COG0436 104 ALALLALLNPGDEVLVPDPGYPSYRAAVRLAGGKPVPVPLDEENG-FlpdPEALEAAITP-RTKAIVLN-SPNNPTGAVY 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 269 PDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSK-KGLVITCASFSKT-AAPSYRIGWIIAGK-FAEQARR 345
Cdd:COG0436 181 SREELEALAELAREHDLLVISDEIYEELVYDGAEHVSILSLPGlKDRTIVINSFSKSyAMTGWRIGYAVGPPeLIAALLK 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 346 HKRALSCSAPLINQW-------TLYEFIAS--GEYDRNIRLLRQRLstnkERMIWclqqympscaRISNPQGGCVIWVDL 416
Cdd:COG0436 261 LQSNLTSCAPTPAQYaaaaaleGPQDYVEEmrAEYRRRRDLLVEGL----NEIGL----------SVVKPEGAFYLFADV 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 417 GSQY-DAVKL-FHLALEAGISITPGLIFsaGKKYRSCFRLSYGLPwSENLEQAIKTLSQL 474
Cdd:COG0436 327 PELGlDSEEFaERLLEEAGVAVVPGSAF--GPAGEGYVRISYATS-EERLEEALERLARF 383
|
|
| Aminotran_1_2 |
pfam00155 |
Aminotransferase class I and II; |
151-471 |
2.87e-25 |
|
Aminotransferase class I and II;
Pssm-ID: 395103 [Multi-domain] Cd Length: 351 Bit Score: 106.24 E-value: 2.87e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 151 NYGPMDGFAPLKKQLIHRYLDfGIGVDSD---ELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKAL 227
Cdd:pfam00155 34 LYGPTDGHPELREALAKFLGR-SPVLKLDreaAVVFGSGAGANIEALIFLLANPGDAILVPAPTYASYIRIARLAGGEVV 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 228 EIPLCPDEGIWLD--DLAQALDEhdIKACVFSTSLNNPVGSfmpDAKREQLVALLE---QRDVVLIEDDVYGDLHFTAKR 302
Cdd:pfam00155 113 RYPLYDSNDFHLDfdALEAALKE--KPKVVLHTSPHNPTGT---VATLEELEKLLDlakEHNILLLVDEAYAGFVFGSPD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 303 ATPAQAYSKKGL-VITCASFSKT-AAPSYRIGWIIAGK-FAEQARRHKRALSCSAPLinQWTLYEfIASGEYDRNirllr 379
Cdd:pfam00155 188 AVATRALLAEGPnLLVVGSFSKAfGLAGWRVGYILGNAaVISQLRKLARPFYSSTHL--QAAAAA-ALSDPLLVA----- 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 380 QRLSTNKERMIWCLQQYMPSCARIS----NPQGGCVIWVDLgSQYDAVKLFH-LALEAGISITPGLIFSAgkkyRSCFRL 454
Cdd:pfam00155 260 SELEEMRQRIKERRDYLRDGLQAAGlsvlPSQAGFFLLTGL-DPETAKELAQvLLEEVGVYVTPGSSPGV----PGWLRI 334
|
330
....*....|....*..
gi 2200057096 455 SYGLPWSENLEQAIKTL 471
Cdd:pfam00155 335 TVAGGTEEELEELLEAI 351
|
|
| PRK15481 |
PRK15481 |
transcriptional regulatory protein PtsJ; Provisional |
21-429 |
6.36e-22 |
|
transcriptional regulatory protein PtsJ; Provisional
Pssm-ID: 185378 [Multi-domain] Cd Length: 431 Bit Score: 97.81 E-value: 6.36e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 21 VRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSSqlnqsrpkRVRLSRE---PTT 97
Cdd:PRK15481 14 IRQLIQAGRLRPGDSLPPVRELASELGVNRNTVAAAYKRLVTAGLAQSQGRNGTVIRGS--------PSPVALEggdPGT 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 98 VnkqgLIEQVYGaihkanvvpfgiaNP-VAAAPTDKALARTMRRVMTLAGASAINygpmdgfaPLKKQLIHRYLDFGIGV 176
Cdd:PRK15481 86 P----LHDLAGG-------------NPdPQRLPDLSRYFARLSRTPRLYGDAPVS--------PELHAWAARWLRDDCPV 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 177 DSdELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLcPDEGIWLDDLAQALdEHDIKACVF 256
Cdd:PRK15481 141 AF-EIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DAEGMQPEKLERAL-AQGARAVIL 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 257 STSLNNPVGSFMPDAKREQLVALLEQR-DVVLIEDDvygdlHFTAKRATP-----AQAYSKKGLVitcASFSKTAAPSYR 330
Cdd:PRK15481 218 TPRAHNPTGCSLSARRAAALRNLLARYpQVLVIIDD-----HFALLSSSPyhsviPQTTQRWALI---RSVSKALGPDLR 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 331 IGWiIAGKFAEQARRHKRALSCSaplinQWT-------LYEFIASGEYDRNIRLLRQRLSTNKERMIWCLQQYMPSCAri 403
Cdd:PRK15481 290 LAF-VASDSATSARLRLRLNSGT-----QWVshllqdlVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYGIAIP-- 361
|
410 420
....*....|....*....|....*.
gi 2200057096 404 sNPQGGCVIWVDLGSQYDAVkLFHLA 429
Cdd:PRK15481 362 -SPGDGLNLWLPLDTDSQAT-ALTLA 385
|
|
| PRK06836 |
PRK06836 |
pyridoxal phosphate-dependent aminotransferase; |
110-456 |
5.63e-20 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180720 Cd Length: 394 Bit Score: 91.41 E-value: 5.63e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 110 AIHKA-NVVPFGIANPVAAAPtdKALARTMRRVMTLAGASAINYGPMDGFaPLKKQLIHRYL--DFGIGVDSDELVITNG 186
Cdd:PRK06836 28 AEYGAdNVFDFSLGNPSVPPP--AAVKEALRELAEEEDPGLHGYMPNAGY-PEVREAIAESLnrRFGTPLTADHIVMTCG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 187 AQEALAIALKCVAKPGDVIAIESPcYFGiiE---LIESLGLKALEIPLCPDE-GIWLDDLAQALDEHdIKAcVFSTSLNN 262
Cdd:PRK06836 105 AAGALNVALKAILNPGDEVIVFAP-YFV--EyrfYVDNHGGKLVVVPTDTDTfQPDLDALEAAITPK-TKA-VIINSPNN 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 263 PVGSFMPDAKREQLVALLEQ------RDVVLIEDDVYGDLHFT-AKRATPAQAYSKkglVITCASFSKTAA-PSYRIGWI 334
Cdd:PRK06836 180 PTGVVYSEETLKALAALLEEkskeygRPIYLISDEPYREIVYDgAEVPYIFKYYDN---SIVVYSFSKSLSlPGERIGYI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 335 I-------AGKFAEQARRHKRALSC-SAPLINQWTLYEFIAS----GEYDRNIRLLRQRLSTNKERMIwclqqympscar 402
Cdd:PRK06836 257 AvnpemedADDLVAALVFANRILGFvNAPALMQRVVAKCLDAtvdvSIYKRNRDLLYDGLTELGFECV------------ 324
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 403 isNPQGGCVIWVD-LGSqyDAVKLFHLALEAGISITPGLIFsAGKKYrscFRLSY 456
Cdd:PRK06836 325 --KPQGAFYLFPKsPEE--DDVAFCEKAKKHNLLLVPGSGF-GCPGY---FRLSY 371
|
|
| PRK05764 |
PRK05764 |
aspartate aminotransferase; Provisional |
145-469 |
6.30e-20 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 235596 Cd Length: 393 Bit Score: 91.34 E-value: 6.30e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 145 AGASAIN-----YGPMDGFAPLKKQLIHRYL-DFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIEL 218
Cdd:PRK05764 52 AAIEALDdgktkYTPAAGIPELREAIAAKLKrDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEM 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 219 IESLGLKALEIPLCPDEG--IWLDDLAQALDEhDIKACVFsTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDD----- 291
Cdd:PRK05764 132 VKLAGGVPVFVPTGEENGfkLTVEQLEAAITP-KTKALIL-NSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEiyekl 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 292 VYGDLHFTakraTPAQAYSK-KGLVITCASFSKTAA-PSYRIGWIIAGK-FAEQARR-HKRALSCsAPLINQWTLYE--- 364
Cdd:PRK05764 210 VYDGAEFT----SIASLSPElRDRTITVNGFSKAYAmTGWRLGYAAGPKeLIKAMSKlQSHSTSN-PTSIAQYAAVAaln 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 365 ----FIAS--GEYDRNIRLLRQRLSTnkermiwclqqyMP--SCARisnPQGGCVIWVDLG-----SQYDAVKLFHLALE 431
Cdd:PRK05764 285 gpqdEVEEmrQAFEERRDLMVDGLNE------------IPglECPK---PEGAFYVFPNVSkllgkSITDSLEFAEALLE 349
|
330 340 350
....*....|....*....|....*....|....*....
gi 2200057096 432 -AGISITPGLIFSAGkkyrSCFRLSYGLPwSENLEQAIK 469
Cdd:PRK05764 350 eAGVAVVPGIAFGAP----GYVRLSYATS-LEDLEEGLE 383
|
|
| HisC |
COG0079 |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid ... |
114-471 |
1.02e-19 |
|
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase [Amino acid transport and metabolism]; Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 439849 [Multi-domain] Cd Length: 341 Bit Score: 90.19 E-value: 1.02e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 114 ANVVPFGIANPVAAAPTdkalartmrrvmtlAGASAINYGPMDGFAPLKKQLIHRYldfgiGVDSDELVITNGAQEALAI 193
Cdd:COG0079 20 SNENPYGPPPKVLEAIA--------------AALDALNRYPDPDATALREALAEYY-----GVPPEQVLVGNGSDELIQL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 194 ALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWLDDLAQALDEHdiKACVFSTSLNNPVGSFMPdakR 273
Cdd:COG0079 81 LARAFLGPGDEVLVPEPTFSEYPIAARAAGAEVVEVPLDEDFSLDLDALLAAITER--TDLVFLCNPNNPTGTLLP---R 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 274 EQLVALLEQ--RDVVLIEDDVYGDlhFTAKRATPAQAYSK-KGLVITcASFSKT-AAPSYRIGWIIAGK-FAEQARRHKR 348
Cdd:COG0079 156 EELEALLEAlpADGLVVVDEAYAE--FVPEEDSALPLLARyPNLVVL-RTFSKAyGLAGLRLGYAIASPeLIAALRRVRG 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 349 ALSCSAPliNQWTLYEFIASGEYdrnIRLLRQRLSTNKERMIWCLQQ----YMPSCArisNpqggcVIWVDLGSqyDAVK 424
Cdd:COG0079 233 PWNVNSL--AQAAALAALEDRAY---LEETRARLRAERERLAAALRAlgltVYPSQA---N-----FVLVRVPE--DAAE 297
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 2200057096 425 LFHLALEAGISITPGlifsAGKKYRSCFRLSYGLPwSEN--LEQAIKTL 471
Cdd:COG0079 298 LFEALLERGILVRDF----SSFGLPDYLRITVGTP-EENdrLLAALKEI 341
|
|
| WHTH_GntR |
cd07377 |
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional ... |
13-77 |
2.53e-18 |
|
Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators; This CD represents the winged HTH DNA-binding domain of the GntR (named after the gluconate operon repressor in Bacillus subtilis) family of bacterial transcriptional regulators and their putative homologs found in eukaryota and archaea. The GntR family has over 6000 members distributed among almost all bacterial species, which is comprised of FadR, HutC, MocR, YtrA, AraR, PlmA, and other subfamilies for the regulation of the most varied biological process. The monomeric proteins of the GntR family are characterized by two function domains: a small highly conserved winged helix-turn-helix prokaryotic DNA binding domain in the N-terminus, and a very diverse regulatory ligand-binding domain in the C-terminus for effector-binding/oligomerization, which provides the basis for the subfamily classifications. Binding of the effector to GntR-like transcriptional regulators is presumed to result in a conformational change that regulates the DNA-binding affinity of the repressor. The GntR-like proteins bind as dimers, where each monomer recognizes a half-site of 2-fold symmetric DNA sequences.
Pssm-ID: 153418 [Multi-domain] Cd Length: 66 Bit Score: 78.64 E-value: 2.53e-18
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLK 77
Cdd:cd07377 2 LYEQIADQLREAILSGELKPGDRLPSERELAEELGVSRTTVREALRELEAEGLVERRPGRGTFVA 66
|
|
| tyr_amTase_E |
TIGR01264 |
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found ... |
152-335 |
1.38e-17 |
|
tyrosine aminotransferase, eukaryotic; This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs. [Energy metabolism, Amino acids and amines]
Pssm-ID: 273529 [Multi-domain] Cd Length: 401 Bit Score: 84.45 E-value: 1.38e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKKQLIHRYLDFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPL 231
Cdd:TIGR01264 69 YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 232 CPDEG--IWLDDLAQALDEHdiKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAY 309
Cdd:TIGR01264 149 LPDKSweIDLKQLESLIDEK--TAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASL 226
|
170 180
....*....|....*....|....*..
gi 2200057096 310 SKKGLVITCASFSKT-AAPSYRIGWII 335
Cdd:TIGR01264 227 SSTVPILSCGGLAKRwLVPGWRLGWII 253
|
|
| PLN02656 |
PLN02656 |
tyrosine transaminase |
95-439 |
3.58e-17 |
|
tyrosine transaminase
Pssm-ID: 178262 [Multi-domain] Cd Length: 409 Bit Score: 83.44 E-value: 3.58e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 95 PTTVNKQGLIEQVYGAI----HKANVVPFGIANPVAAAPTDKALARTMRRVMTLAGASAINYGPMDGFaPLKKQLIHRYL 170
Cdd:PLN02656 8 TKTITIKGILSLLMESIddeeNGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGL-PQARRAIAEYL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 171 --DFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCyFGIIELIESL-GLKALEIPLCPDEGIWLD-DLAQAL 246
Cdd:PLN02656 87 srDLPYKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPG-FPIYELCAAFrHLEVRYVDLLPEKGWEVDlDAVEAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 247 DEHDIKACVFsTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKT-A 325
Cdd:PLN02656 166 ADQNTVALVI-INPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRwI 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 326 APSYRIGWIIAG---------KFAEQARRHKRALSCSAPLINQW--TLYEFIASGEYDRNIRLLRQRLSTNKERMiwclq 394
Cdd:PLN02656 245 VPGWRLGWFVTTdpsgsfrdpKIVERIKKYFDILGGPATFIQAAvpTILEQTDESFFKKTINILKQSSDICCDRI----- 319
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2200057096 395 QYMPSCARISNPQGGCVIWVDLG-SQYDAVK-----LFHLALEAGISITPG 439
Cdd:PLN02656 320 KEIPCITCPHKPEGSMAVMVKLNlSLLEDISddidfCFKLAREESVIILPG 370
|
|
| PRK07550 |
PRK07550 |
aminotransferase; |
127-343 |
3.84e-17 |
|
aminotransferase;
Pssm-ID: 181026 [Multi-domain] Cd Length: 386 Bit Score: 83.08 E-value: 3.84e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 127 AAPTDKAlARTMRRVM--TLAGASAINYGPMDGFAPLKKQLIHRY-LDFGIGVDSDELVITNGAQEALAIALKCVAKPGD 203
Cdd:PRK07550 37 AVPGYPP-PPELLRALaeAAADPAAHLYGPVEGLPELREAYAAHYsRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGD 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 204 VIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWLD-DLAQALDEHDIKACVFSTSlNNPVGSFMPDAKREQLVALLEQ 282
Cdd:PRK07550 116 EVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDpAAAEALITPRTRAIALVTP-NNPTGVVYPPELLHELYDLARR 194
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2200057096 283 RDVVLIEDDVYGDlhFTAKRATPAQAYSKKG---LVITCASFSKT-AAPSYRIGWIIAG-KFAEQA 343
Cdd:PRK07550 195 HGIALILDETYRD--FDSGGGAPHDLFADPDwddTLVHLYSFSKSyALTGHRVGAVVASpARIAEI 258
|
|
| PRK07324 |
PRK07324 |
transaminase; Validated |
137-473 |
5.93e-17 |
|
transaminase; Validated
Pssm-ID: 235989 Cd Length: 373 Bit Score: 82.29 E-value: 5.93e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 137 TMRRVMTLAGASA-----------INYGPMDGFAPLKK---QLIHRyldfgigVDSDELVITNGAQEALAIALKCVAKPG 202
Cdd:PRK07324 32 TLEELLALAGKNPeafyqelgqkkLTYGWIEGSPEFKEavaSLYQN-------VKPENILQTNGATGANFLVLYALVEPG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 203 D-VIAIeSPCYFGIIELIESLGLKALEIPLCPDEGiWLDDLAQaldehdIKACVFS-TSL------NNPVGSFMPDAKRE 274
Cdd:PRK07324 105 DhVISV-YPTYQQLYDIPESLGAEVDYWQLKEENG-WLPDLDE------LRRLVRPnTKLicinnaNNPTGALMDRAYLE 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 275 QLVALLEQRDVVLIEDDVYgdLHFTAKRATPAQA--YsKKGlvITCASFSKT-AAPSYRIGWIIAG-KFAEQARRHKRal 350
Cdd:PRK07324 177 EIVEIARSVDAYVLSDEVY--RPLDEDGSTPSIAdlY-EKG--ISTNSMSKTySLPGIRVGWIAANeEVIDILRKYRD-- 249
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 351 scsaplinqwtlYEFIASGEYD----------------RNIRLLRQRLSTNKErmiWCLQQYMPSCARisnPQGGCV--- 411
Cdd:PRK07324 250 ------------YTMICAGVFDdmlaslalehrdaileRNRKIVRTNLAILDE---WVAKEPRVSYVK---PKAVSTsfv 311
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2200057096 412 -IWVDLGSQYDAVKLFHlalEAGISITPGLIFSAgkkyRSCFRLSYGLPwSENLEQAIKTLSQ 473
Cdd:PRK07324 312 kLDVDMPSEDFCLKLLK---ETGVLLVPGNRFDL----EGHVRIGYCCD-TETLKKGLKKLSE 366
|
|
| PRK06348 |
PRK06348 |
pyridoxal phosphate-dependent aminotransferase; |
152-359 |
6.79e-17 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180537 Cd Length: 384 Bit Score: 82.08 E-value: 6.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKKQLIHRYL-DFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIP 230
Cdd:PRK06348 62 YTDSGGDVELIEEIIKYYSkNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 231 LCPDEGIWLD-DLAQALDEHDIKACVFSTSlNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAY 309
Cdd:PRK06348 142 TYEEDGFQINvKKLEALITSKTKAIILNSP-NNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLA 220
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2200057096 310 SKKGLVITCASFSKT-AAPSYRIGWIIAGKFA-EQARRHKRALSCSAPLINQ 359
Cdd:PRK06348 221 GMPERTITFGSFSKDfAMTGWRIGYVIAPDYIiETAKIINEGICFSAPTISQ 272
|
|
| PRK07683 |
PRK07683 |
aminotransferase A; Validated |
145-456 |
8.48e-17 |
|
aminotransferase A; Validated
Pssm-ID: 236075 Cd Length: 387 Bit Score: 82.08 E-value: 8.48e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 145 AGASAIN-----YGPMDGFAPLKKQLIHRYLD-FGIGVDSD-ELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIE 217
Cdd:PRK07683 49 AAKRAITenytsYTHNAGLLELRKAACNFVKDkYDLHYSPEsEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEP 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 218 LIESLGLKALEIPLCPDeGIWLddLAQALDEH--DIKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGD 295
Cdd:PRK07683 129 IIRLCGAKPVFIDTRST-GFRL--TAEALENAitEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSE 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 296 LHFTAKRATPAQAYSKKGLVITCASFSKT-AAPSYRIGWIIAGKF-AEQARR-HKRALSCSAPlINQWTLYEFIASGEYD 372
Cdd:PRK07683 206 LVYEQPHTSIAHFPEMREKTIVINGLSKShSMTGWRIGFLFAPSYlAKHILKvHQYNVTCASS-ISQYAALEALTAGKDD 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 373 RNIrlLRqrlSTNKERMIWCLQQYMPSCARISNPQGGCVIWVDLGSQYDAVKLFHLAL--EAGISITPGLIFSA-GKKYr 449
Cdd:PRK07683 285 AKM--MR---HQYKKRRDYVYNRLISMGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLveEAGLAVVPGSAFSEyGEGY- 358
|
....*..
gi 2200057096 450 scFRLSY 456
Cdd:PRK07683 359 --VRLSY 363
|
|
| YhcF |
COG1725 |
DNA-binding transcriptional regulator YhcF, GntR family [Transcription]; |
5-94 |
9.19e-17 |
|
DNA-binding transcriptional regulator YhcF, GntR family [Transcription];
Pssm-ID: 441331 [Multi-domain] Cd Length: 114 Bit Score: 75.99 E-value: 9.19e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 5 ISRSNSEFLYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSSQLNQS 84
Cdd:COG1725 3 IDFDSGVPIYEQIADQIKEAIASGELKPGDRLPSVRELAAELGVNPNTVAKAYRELEDEGLIETRRGKGTFVAEDARELL 82
|
90
....*....|
gi 2200057096 85 RPKRVRLSRE 94
Cdd:COG1725 83 EERREEFLEE 92
|
|
| PRK07682 |
PRK07682 |
aminotransferase; |
115-469 |
2.34e-16 |
|
aminotransferase;
Pssm-ID: 181082 [Multi-domain] Cd Length: 378 Bit Score: 80.55 E-value: 2.34e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 115 NVVPFGIANP--VAAAPTDKALARTMRRVMTLAGASAinygpmdGFAPLKKQlIHRYLD--FGIGVDSD-ELVITNGAQE 189
Cdd:PRK07682 21 GVISLGVGEPdfVTPWNVREASIRSLEQGYTSYTANA-------GLLELRQE-IAKYLKkrFAVSYDPNdEIIVTVGASQ 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 190 ALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWLD--DLAQALDEHdIKAcVFSTSLNNPVGSF 267
Cdd:PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQpaQIEAAITAK-TKA-ILLCSPNNPTGAV 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 268 MPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKT-AAPSYRIGWIIAGKFAEQA--R 344
Cdd:PRK07682 171 LNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGfAMTGWRLGFIAAPVYFSEAmlK 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 345 RHKRALSCsAPLINQWTLYEFIASGEYDrnirLLRQRLSTNKERMIWC-------LQQYMPSCARISNPQggcVIWVDLG 417
Cdd:PRK07682 251 IHQYSMMC-APTMAQFAALEALRAGNDD----VIRMRDSYRKRRNFFVtsfneigLTCHVPGGAFYAFPS---ISSTGLS 322
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2200057096 418 SQYDAVKLFhlaLEAGISITPGLIFSA-GKKYRSCfrlSYGLPWsENLEQAIK 469
Cdd:PRK07682 323 SEEFAEQLL---LEEKVAVVPGSVFGEsGEGFIRC---SYATSL-EQLQEAMK 368
|
|
| tyr_nico_aTase |
TIGR01265 |
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal ... |
151-335 |
9.18e-16 |
|
tyrosine/nicotianamine family aminotransferase; This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Pssm-ID: 188123 Cd Length: 403 Bit Score: 78.92 E-value: 9.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 151 NYGPMDGFAPLKKQL---IHRYLDFGIgvDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKAL 227
Cdd:TIGR01265 68 GYAPSVGALAAREAVaeyLSSDLPGKL--TADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 228 EIPLCPDEG--IWLDDLAQALDEHdiKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATP 305
Cdd:TIGR01265 146 LYDLLPEKDweIDLDGLESLADEK--TVAIVVINPSNPCGSVFSRDHLQKIAEVAEKLGIPIIADEIYGHMVFGDAPFIP 223
|
170 180 190
....*....|....*....|....*....|.
gi 2200057096 306 AQAYSKKGLVITCASFSKT-AAPSYRIGWII 335
Cdd:TIGR01265 224 MASFASIVPVLSLGGISKRwVVPGWRLGWII 254
|
|
| PRK06108 |
PRK06108 |
pyridoxal phosphate-dependent aminotransferase; |
152-336 |
1.06e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180404 Cd Length: 382 Bit Score: 78.45 E-value: 1.06e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKkQLIHRYLD--FGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEI 229
Cdd:PRK06108 57 YTHNLGIPELR-EALARYVSrlHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCV 135
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 230 PLCPDEGIW---LDDLAQALDEhDIKAcVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPA 306
Cdd:PRK06108 136 PLDFGGGGWtldLDRLLAAITP-RTRA-LFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPS 213
|
170 180 190
....*....|....*....|....*....|...
gi 2200057096 307 --QAYSKKGLVITCASFSKT-AAPSYRIGWIIA 336
Cdd:PRK06108 214 flDIAEPDDRIIFVNSFSKNwAMTGWRLGWLVA 246
|
|
| PRK07568 |
PRK07568 |
pyridoxal phosphate-dependent aminotransferase; |
150-359 |
2.75e-15 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181036 Cd Length: 397 Bit Score: 77.58 E-value: 2.75e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 150 INYGPMDGFAPLKKQLIHRYLDFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEI 229
Cdd:PRK07568 60 LAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPV 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 230 PLCPDEGIWLDDLA--QALDEHDIKACVFStSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQ 307
Cdd:PRK07568 140 TTKIEEGFHLPSKEeiEKLITPKTKAILIS-NPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL 218
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 308 AYskKGL---VITCASFSKT-AAPSYRIGWII---------AGKFAeQARrhkralsCSAPLINQ 359
Cdd:PRK07568 219 SL--EGLedrVIIIDSVSKRySACGARIGCLIsknkeliaaAMKLC-QAR-------LSPPTLEQ 273
|
|
| PRK08960 |
PRK08960 |
pyridoxal phosphate-dependent aminotransferase; |
119-442 |
1.59e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 181595 Cd Length: 387 Bit Score: 75.09 E-value: 1.59e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 119 FGIANPVAAAPTdKALArtmrrvmtlagASAINYGPMDGFAPLKKQLIHRYLD-FGIGVDSDELVITNGAQEALAIALKC 197
Cdd:PRK08960 44 FTTAEPIVAAGQ-AALA-----------AGHTRYTAARGLPALREAIAGFYAQrYGVDVDPERILVTPGGSGALLLASSL 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 198 VAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWL--DDLAQALDEHDIKACVFSTSlnNPVGSFMPDAKREQ 275
Cdd:PRK08960 112 LVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLtpALVERHWNADTVGALVASPA--NPTGTLLSRDELAA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 276 LVALLEQRDVVLIEDDVYGDLHFTAKRATpAQAYSKKGLVITcaSFSKT-AAPSYRIGWIIAGK-FAEQARRHKRALSCS 353
Cdd:PRK08960 190 LSQALRARGGHLVVDEIYHGLTYGVDAAS-VLEVDDDAFVLN--SFSKYfGMTGWRLGWLVAPPaAVPELEKLAQNLYIS 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 354 APLINQwtlYEFIASGEYDrNIRLLRQRLSTNKERMIWCLQQYMPSCARIS-NPQGGCVIWVDLGSQYDAVKLF--HLAL 430
Cdd:PRK08960 267 ASTPAQ---HAALACFEPE-TLAILEARRAEFARRRDFLLPALRELGFGIAvEPQGAFYLYADISAFGGDAFAFcrHFLE 342
|
330
....*....|..
gi 2200057096 431 EAGISITPGLIF 442
Cdd:PRK08960 343 TEHVAFTPGLDF 354
|
|
| PRK09082 |
PRK09082 |
methionine aminotransferase; Validated |
133-333 |
2.41e-14 |
|
methionine aminotransferase; Validated
Pssm-ID: 181642 [Multi-domain] Cd Length: 386 Bit Score: 74.57 E-value: 2.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 133 ALARTMRrvmtlAGASaiNYGPMDGFAPLKKQLIHRYLD-FGIGVDSD-ELVITNGAQEALAIALKCVAKPGD-VIAIEs 209
Cdd:PRK09082 51 ALAYAMA-----AGHN--QYPPMTGVAALREAIAAKTARlYGRQYDADsEITVTAGATEALFAAILALVRPGDeVIVFD- 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 210 PCYFGIIELIESLGLKALEIPL-CPDEGIWLDDLAQALDEHdiKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLI 288
Cdd:PRK09082 123 PSYDSYAPAIELAGGRAVRVALqPPDFRVDWQRFAAAISPR--TRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVL 200
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2200057096 289 EDDVYGDLHFTAKRATPAQAYSK---KGLVITcaSFSKTaapsYRI-GW 333
Cdd:PRK09082 201 SDEVYEHIVFDGAGHASVLRHPElreRAFVVS--SFGKT----YHVtGW 243
|
|
| PRK08363 |
PRK08363 |
alanine aminotransferase; Validated |
152-334 |
3.93e-14 |
|
alanine aminotransferase; Validated
Pssm-ID: 181402 Cd Length: 398 Bit Score: 74.07 E-value: 3.93e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKKQLIHR-YLDFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIP 230
Cdd:PRK08363 66 YGPSEGLPELREAIVKReKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYR 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 231 LCPDEGiW---LDDLAQALDEHDIKACVFSTslNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAq 307
Cdd:PRK08363 146 TIEEEG-WqpdIDDIRKKITEKTKAIAVINP--NNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPG- 221
|
170 180
....*....|....*....|....*...
gi 2200057096 308 AYSKKGLVITCASFSKTA-APSYRIGWI 334
Cdd:PRK08363 222 SLTKDVPVIVMNGLSKVYfATGWRLGYI 249
|
|
| GntR |
pfam00392 |
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the ... |
13-75 |
4.79e-14 |
|
Bacterial regulatory proteins, gntR family; This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerization domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor.
Pssm-ID: 306822 [Multi-domain] Cd Length: 64 Bit Score: 66.48 E-value: 4.79e-14
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYF 75
Cdd:pfam00392 1 LYEQVYARLREDILSGRLRPGDKLPSERELAAEFGVSRTTVREALRRLEAEGLVERRQGRGTF 63
|
|
| PRK07777 |
PRK07777 |
putative succinyldiaminopimelate transaminase DapC; |
138-336 |
6.64e-14 |
|
putative succinyldiaminopimelate transaminase DapC;
Pssm-ID: 236095 [Multi-domain] Cd Length: 387 Bit Score: 73.15 E-value: 6.64e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 138 MRRVMTLAGASAIN-YGPMDGFAPLKKQLI-HRYLDFGIGVDSD-ELVITNGAQEALAIALKCVAKPGD-VIAIEsPCYF 213
Cdd:PRK07777 42 MLEAAQEAIAGGVNqYPPGPGIPELRAAIAaQRRRRYGLEYDPDtEVLVTVGATEAIAAAVLGLVEPGDeVLLIE-PYYD 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 214 GIIELIESLGLKALEIPLCPDEGIW---LDDLAQALDEHdIKACVFSTSlNNPVGSFMPDAKREQLVALLEQRDVVLIED 290
Cdd:PRK07777 121 SYAAVIAMAGAHRVPVPLVPDGRGFaldLDALRAAVTPR-TRALIVNSP-HNPTGTVLTAAELAAIAELAVEHDLLVITD 198
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2200057096 291 DVYGDLHFTAKRATPAQAY-SKKGLVITCASFSKT-AAPSYRIGWIIA 336
Cdd:PRK07777 199 EVYEHLVFDGARHLPLATLpGMRERTVTISSAAKTfNVTGWKIGWACG 246
|
|
| PRK07337 |
PRK07337 |
pyridoxal phosphate-dependent aminotransferase; |
120-474 |
7.54e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 180937 Cd Length: 388 Bit Score: 72.78 E-value: 7.54e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 120 GIANP--VAAAPTDKALARTMRRVMTlagasaiNYGPMDGFAPLKKQLIHRYLD-FGIGVDSDELVITNGAQEALAIALK 196
Cdd:PRK07337 36 GIGEPdfTAPEPVVEAAARALRRGVT-------QYTSALGLAPLREAIAAWYARrFGLDVAPERIVVTAGASAALLLACL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 197 CVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGIWLDdlAQALDEH--DIKACVFSTSLNNPVG-SFMPDAKR 273
Cdd:PRK07337 109 ALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLT--AADVEAAwgERTRGVLLASPSNPTGtSIAPDELR 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 274 EqLVALLEQRDVVLIEDDVYGDLHFTAKratPAQAYSKKGLVITCASFSKT-AAPSYRIGWIIA-----GKFAEQAR--- 344
Cdd:PRK07337 187 R-IVEAVRARGGFTIVDEIYQGLSYDAA---PVSALSLGDDVITINSFSKYfNMTGWRLGWLVVpealvGTFEKLAQnlf 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 345 -------RHKrALSCSAPlinqwtlyEFIAsgEYDRnirllrqRLSTNKERMIWclqqYMPSCARIS-----NPQGGCVI 412
Cdd:PRK07337 263 icasalaQHA-ALACFEP--------DTLA--IYER-------RRAEFKRRRDF----IVPALESLGfkvpvMPDGAFYV 320
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 413 WVDLGS-----QYDAVKLFHLAL-EAGISITPGLIF--SAGKKYrscFRLSYGLPWsENLEQAIKTLSQL 474
Cdd:PRK07337 321 YADCRGvahpaAGDSAALTQAMLhDAGVVLVPGRDFgpHAPRDY---IRLSYATSM-SRLEEAVARLGKL 386
|
|
| PRK06225 |
PRK06225 |
pyridoxal phosphate-dependent aminotransferase; |
152-336 |
9.43e-14 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235749 [Multi-domain] Cd Length: 380 Bit Score: 72.48 E-value: 9.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKkQLIHRYLdfgiGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPL 231
Cdd:PRK06225 62 YPPPEGFPELR-ELILKDL----GLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPI 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 232 CPDE-GIWL--DDLAQALDEHdiKACVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLhftAKRATPAQA 308
Cdd:PRK06225 137 YSEEcNYKLtpELVKENMDEN--TRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDF---AREHTLAAE 211
|
170 180
....*....|....*....|....*....
gi 2200057096 309 YSKKGlVITCASFSKT-AAPSYRIGWIIA 336
Cdd:PRK06225 212 YAPEH-TVTSYSFSKIfGMAGLRIGAVVA 239
|
|
| PRK06207 |
PRK06207 |
pyridoxal phosphate-dependent aminotransferase; |
157-456 |
1.09e-13 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235742 Cd Length: 405 Bit Score: 72.49 E-value: 1.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 157 GFAPLKKQLIHRYLDF-GIGVDS-DELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPL--- 231
Cdd:PRK06207 79 GDADIRELLAARLAAFtGAPVDAaDELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLdyl 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 232 --CPDEGIWLDDLAQALdEHDIKACVFSTSlNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAY 309
Cdd:PRK06207 159 saDKRAGLDLDQLEEAF-KAGVRVFLFSNP-NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRAL 236
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 310 S-KKGLVITCASFSKTAAPS-YRIG------WIIAGKFAEQARRHKRALSCSAPLINQWT------LYEFIASGEYDRN- 374
Cdd:PRK06207 237 PiDPENVITIMGPSKTESLSgYRLGvafgspAIIDRMEKLQAIVSLRAAGYSQAVLRTWFsepdgwMKDRIARHQAIRDd 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 375 -IRLLRQRlstnkermiwclqqymPSCArISNPQGGCVIWVDLG----SQYDAVKLfhLALEAGISITPGLIFSagKKYR 449
Cdd:PRK06207 317 lLRVLRGV----------------EGVF-VRAPQAGSYLFPRLPrlavSLHDFVKI--LRLQAGVIVTPGTEFS--PHTA 375
|
....*..
gi 2200057096 450 SCFRLSY 456
Cdd:PRK06207 376 DSIRLNF 382
|
|
| PRK07309 |
PRK07309 |
pyridoxal phosphate-dependent aminotransferase; |
145-471 |
1.65e-13 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235985 Cd Length: 391 Bit Score: 72.06 E-value: 1.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 145 AGASAIN-----YGPMDGFAPLKKQLIH----RY-LDFgigVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFG 214
Cdd:PRK07309 51 AAKRAIDanqshYTGMAGLLELRQAAADfvkeKYnLDY---APENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPG 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 215 IIELIESLGLKALEIP-------LCPDEgiwlddLAQALDEH--DIKACVfstsLN---NPVGSFMPDAKREQLVALLEQ 282
Cdd:PRK07309 128 YEPIVNLVGAEIVEIDttendfvLTPEM------LEKAILEQgdKLKAVI----LNypaNPTGVTYSREQIKALADVLKK 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 283 RDVVLIEDDVYGDLHFTAKRATPAQAYSKKGlVITCASFSKT-AAPSYRIGWIIAGK-FAEQARRHKRALSCSAPLINQW 360
Cdd:PRK07309 198 YDIFVISDEVYSELTYTGEPHVSIAEYLPDQ-TILINGLSKShAMTGWRIGLIFAPAeFTAQLIKSHQYLVTAATTMAQF 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 361 TLYEFIASGEYDRNIrlLRQRLSTNKERMIWCLQQYMPSCARisnPQGGCVIWVDLGSQY--DAVKLFH-LALEAGISIT 437
Cdd:PRK07309 277 AAVEALTNGKDDALP--MKKEYIKRRDYIIEKMTDLGFKIIK---PDGAFYIFAKIPAGYnqDSFKFLQdFARKKAVAFI 351
|
330 340 350
....*....|....*....|....*....|....*
gi 2200057096 438 PGLIFSA-GKKYrscFRLSYGLPWsENLEQAIKTL 471
Cdd:PRK07309 352 PGAAFGPyGEGY---VRLSYAASM-ETIKEAMKRL 382
|
|
| MngR |
COG2188 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
13-94 |
2.41e-13 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441791 [Multi-domain] Cd Length: 238 Bit Score: 69.51 E-value: 2.41e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSSQLNQSRPKRVRLS 92
Cdd:COG2188 6 LYLQIADALRERIESGELPPGDRLPSERELAEEFGVSRMTVRKALDELVEEGLLERRQGRGTFVAEPKIEYPLSRLTSFT 85
|
..
gi 2200057096 93 RE 94
Cdd:COG2188 86 EE 87
|
|
| HTH_GNTR |
smart00345 |
helix_turn_helix gluconate operon transcriptional repressor; |
17-75 |
2.15e-12 |
|
helix_turn_helix gluconate operon transcriptional repressor;
Pssm-ID: 197669 [Multi-domain] Cd Length: 60 Bit Score: 61.82 E-value: 2.15e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*....
gi 2200057096 17 VIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYF 75
Cdd:smart00345 1 VAERLREDIVSGELRPGDKLPSERELAAQLGVSRTTVREALSRLEAEGLVQRRPGSGTF 59
|
|
| FadR |
COG2186 |
DNA-binding transcriptional regulator, FadR family [Transcription]; |
13-98 |
6.63e-12 |
|
DNA-binding transcriptional regulator, FadR family [Transcription];
Pssm-ID: 441789 [Multi-domain] Cd Length: 232 Bit Score: 64.95 E-value: 6.63e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKS-SQLNQSRPKRVRL 91
Cdd:COG2186 8 LAEQVAEQLRELILSGELKPGDRLPSERELAEQLGVSRTTVREALRALEALGLVEVRQGGGTFVREpSPWALLDPLALLL 87
|
....*..
gi 2200057096 92 SREPTTV 98
Cdd:COG2186 88 ALDDASL 94
|
|
| PLN00175 |
PLN00175 |
aminotransferase family protein; Provisional |
157-336 |
3.16e-11 |
|
aminotransferase family protein; Provisional
Pssm-ID: 215089 [Multi-domain] Cd Length: 413 Bit Score: 64.89 E-value: 3.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 157 GFAPLKKQLIHRYL-DFGIGVDSD-ELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLC-P 233
Cdd:PLN00175 92 GVPELNSAIAERFKkDTGLVVDPEkEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRpP 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 234 DEGIWLDDLAQALDEhDIKACVFSTSlNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAqaySKKG 313
Cdd:PLN00175 172 DFAVPEDELKAAFTS-KTRAILINTP-HNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMA---SLPG 246
|
170 180
....*....|....*....|....*..
gi 2200057096 314 L---VITCASFSKT-AAPSYRIGWIIA 336
Cdd:PLN00175 247 MyerTVTMNSLGKTfSLTGWKIGWAIA 273
|
|
| PLN00143 |
PLN00143 |
tyrosine/nicotianamine aminotransferase; Provisional |
151-456 |
3.18e-11 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 165711 [Multi-domain] Cd Length: 409 Bit Score: 65.03 E-value: 3.18e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 151 NYGPMDGFAPLKKQlIHRYL--DFGIGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALE 228
Cdd:PLN00143 69 SYAPTGGILPARRA-IADYLsnDLPYQLSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRH 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 229 IPLCPDEGIWLD-DLAQAL-DEHDIKACVFSTSlnNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPA 306
Cdd:PLN00143 148 FDLLPEKGWEVDlDAVEAIaDENTIAMVIINPG--NPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPM 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 307 QAYSKKGLVITCASFSKT-AAPSYRIGWIIAG------KFAEQARRHKRAL----------SCSAPLINQWTLYEFiasg 369
Cdd:PLN00143 226 GLFASIVPVITLGSISKRwMIPGWGLGWLVTCdpsgllQICEIADSIKKALnpapfpptfiQAAIPEILEKTTEDF---- 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 370 eYDRNIRLLRQRLSTNKERMiwclqQYMPSCARISNPQGGCVIWVDLG------SQYDAVKLFHLALEAGISITPGLIFS 443
Cdd:PLN00143 302 -FSKTINILRAALAFCYDKL-----KEIPCIMCPQKAEGAFFALVKLNlllledIEDDMEFCLKLAKEESLIILPGVTVG 375
|
330
....*....|...
gi 2200057096 444 AGKKYRSCFRLSY 456
Cdd:PLN00143 376 LKNWLRITFAVEQ 388
|
|
| PRK10225 |
PRK10225 |
Uxu operon transcriptional regulator; |
14-83 |
1.67e-10 |
|
Uxu operon transcriptional regulator;
Pssm-ID: 182318 [Multi-domain] Cd Length: 257 Bit Score: 61.57 E-value: 1.67e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2200057096 14 YQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSG-YFLKSSQLNQ 83
Cdd:PRK10225 11 YQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLDVTRTVVREALIMLEIKGLVEVRRGAGiYVLDSSGSHN 81
|
|
| PLN03026 |
PLN03026 |
histidinol-phosphate aminotransferase; Provisional |
175-326 |
1.70e-10 |
|
histidinol-phosphate aminotransferase; Provisional
Pssm-ID: 178597 Cd Length: 380 Bit Score: 62.41 E-value: 1.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 175 GVDSDELVITNGAQEALAIALKCVAKPGDVIaIESPCYFGIIELIESL-GLKALEIPLCPDEGIWLDDLAQALDEHDIKa 253
Cdd:PLN03026 100 GLESENILVGCGADELIDLLMRCVLDPGDKI-IDCPPTFGMYVFDAAVnGAEVIKVPRTPDFSLDVPRIVEAVETHKPK- 177
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2200057096 254 CVFSTSLNNPVGSFMPDakrEQLVALLeQRDVVLIEDDVYGDLHFTAKRATPAQAYSKkglVITCASFSKTAA 326
Cdd:PLN03026 178 LLFLTSPNNPDGSIISD---DDLLKIL-ELPILVVLDEAYIEFSTQESRMKWVKKYDN---LIVLRTFSKRAG 243
|
|
| PRK08912 |
PRK08912 |
aminotransferase; |
152-337 |
1.24e-09 |
|
aminotransferase;
Pssm-ID: 181580 Cd Length: 387 Bit Score: 59.99 E-value: 1.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKKQLIHRYLDF-GIGVDSD-ELVITNGAQEALAIALKCVAKPGD-VIAIEsPCYFGIIELIESLGLKALE 228
Cdd:PRK08912 59 YPPMMGLPELRQAVAAHYARFqGLDLDPEtEVMVTSGATEALAAALLALVEPGDeVVLFQ-PLYDAYLPLIRRAGGVPRL 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 229 IPL-CPDEGIWLDDLAQALDEHdIKACVFSTSLnNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQ 307
Cdd:PRK08912 138 VRLePPHWRLPRAALAAAFSPR-TKAVLLNNPL-NPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLM 215
|
170 180 190
....*....|....*....|....*....|....*
gi 2200057096 308 AY---SKKGLVITCA--SFSKTAapsYRIGWIIAG 337
Cdd:PRK08912 216 TLpgmRERTVKIGSAgkIFSLTG---WKVGFVCAA 247
|
|
| PLN00145 |
PLN00145 |
tyrosine/nicotianamine aminotransferase; Provisional |
101-336 |
1.40e-09 |
|
tyrosine/nicotianamine aminotransferase; Provisional
Pssm-ID: 215074 [Multi-domain] Cd Length: 430 Bit Score: 59.78 E-value: 1.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 101 QGLIEQVYGAIHKAN----VVPFGIANPVAAAPTDKALARTMRRVMTLAGASAINYGPMDGFAPLKKQlIHRYL--DFGI 174
Cdd:PLN00145 35 RAVLNRVKACVDAGGgprpVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRA-IAEYLsrDLPY 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 175 GVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYfgiiELIESL----GLKALEIPLCPDEGiWLDDLA--QALDE 248
Cdd:PLN00145 114 ELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGY----PLYEARavfsGLEVRHFDLLPERG-WEVDLEgvEALAD 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 249 HDIKACVFsTSLNNPVGSFMpdaKREQLVALLE---QRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKT- 324
Cdd:PLN00145 189 ENTVAMVI-INPNNPCGSVY---SYEHLAKIAEtarKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRw 264
|
250
....*....|..
gi 2200057096 325 AAPSYRIGWIIA 336
Cdd:PLN00145 265 VVPGWRLGWIAT 276
|
|
| pdhR |
PRK09464 |
pyruvate dehydrogenase complex transcriptional repressor PdhR; |
10-84 |
2.90e-09 |
|
pyruvate dehydrogenase complex transcriptional repressor PdhR;
Pssm-ID: 181879 [Multi-domain] Cd Length: 254 Bit Score: 57.72 E-value: 2.90e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 10 SEFLYQQVIQLVrdlcLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKsSQLNQS 84
Cdd:PRK09464 12 SDVIEQQLEFLI----LEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRLEAKGLLLRRQGGGTFVQ-SSLWQS 81
|
|
| PRK05166 |
PRK05166 |
histidinol-phosphate transaminase; |
123-293 |
4.93e-09 |
|
histidinol-phosphate transaminase;
Pssm-ID: 179950 Cd Length: 371 Bit Score: 57.84 E-value: 4.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 123 NPVAAAPTdkalartMRRVMTLAGASAINYGPMDGFApLKKQLIHRYldfgiGVDSDELVITNGAQEALAIALKCVAKPG 202
Cdd:PRK05166 46 NPLGPSPA-------VRRAFADIAELLRLYPDPQGRA-LREAIAART-----GVPADRIILGNGSEDLIAVICRAVLRPG 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 203 DVIAIESPCyFGIIELIESL-GLKALEIPLCPDEGIWLDDLAQALDEhDIKACVFSTSLnNPVGSFMPDAKREQLVALLE 281
Cdd:PRK05166 113 DRVVTLYPS-FPLHEDYPTMmGARVERVTVTPDLGFDLDALCAAVAR-APRMLMFSNPS-NPVGSWLTADQLARVLDATP 189
|
170
....*....|..
gi 2200057096 282 QrDVVLIEDDVY 293
Cdd:PRK05166 190 P-ETLIVVDEAY 200
|
|
| PRK05957 |
PRK05957 |
pyridoxal phosphate-dependent aminotransferase; |
152-473 |
2.39e-08 |
|
pyridoxal phosphate-dependent aminotransferase;
Pssm-ID: 235654 Cd Length: 389 Bit Score: 55.85 E-value: 2.39e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 152 YGPMDGFAPLKkQLIHRYL--DFGIGVDSDE-LVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALE 228
Cdd:PRK05957 61 YQAVQGIPPLL-EAITQKLqqDNGIELNNEQaIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPIL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 229 IPLcpDEG--IWLDDLAQALDEHdIKACVfSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDL------HFTA 300
Cdd:PRK05957 140 VPT--DDNyqLQPEAIEQAITPK-TRAIV-TISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFtydgvkHFSP 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 301 KRATPAQAYSkkglvITCASFSKT-AAPSYRIGWIIAGKFAEQA--RRHKRALSCsAPLINQWTLYEFIASG-EYdrnir 376
Cdd:PRK05957 216 GSIPGSGNHT-----ISLYSLSKAyGFASWRIGYMVIPIHLLEAikKIQDTILIC-PPVVSQYAALGALQVGkSY----- 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 377 lLRQRLSTNKERMIWCLQQYMPSCAR--ISNPQGGCVIWVDLGSQYDAVKLF-HLALEAGISITPGLIFSAGKkyrSCF- 452
Cdd:PRK05957 285 -CQQHLPEIAQVRQILLKSLGQLQDRctLHPANGAFYCFLKVNTDLNDFELVkQLIREYRVAVIPGTTFGMKN---GCYl 360
|
330 340
....*....|....*....|....*...
gi 2200057096 453 RLSYG-LPWS------ENLEQAIKTLSQ 473
Cdd:PRK05957 361 RIAYGaLQKAtakegiERLVQGLKTIVQ 388
|
|
| PRK13355 |
PRK13355 |
bifunctional HTH-domain containing protein/aminotransferase; Provisional |
115-335 |
1.10e-07 |
|
bifunctional HTH-domain containing protein/aminotransferase; Provisional
Pssm-ID: 237361 [Multi-domain] Cd Length: 517 Bit Score: 54.36 E-value: 1.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 115 NVVPFGIANPvaaaptDKALaRTMRRVMTlagaSAINYGPMDGFAPLKKQLIHRYLDFGI-GVDSDELVITNGAQEALAI 193
Cdd:PRK13355 155 NPAPFGFRTP------DEVV-YDMAQQLT----DTEGYSDSKGLFSARKAIMQYAQLKGLpNVDVDDIYTGNGVSELINL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 194 ALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIpLCPDEGIWLDDLAqaldehDIKACVFSTSL-------NNPVGS 266
Cdd:PRK13355 224 SMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHY-RCDEQSEWYPDID------DIRSKITSRTKaiviinpNNPTGA 296
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 267 FMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKT-AAPSYRIGWII 335
Cdd:PRK13355 297 LYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKShMIAGYRIGWMI 366
|
|
| PRK12414 |
PRK12414 |
putative aminotransferase; Provisional |
129-336 |
5.08e-07 |
|
putative aminotransferase; Provisional
Pssm-ID: 183514 Cd Length: 384 Bit Score: 51.71 E-value: 5.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 129 PTDKALARTMRRVMTlAGASaiNYGPMDGFAPLKKQLIHRYLD-FGIGVDSD-ELVITNGAQEALAIALKCVAKPGD-VI 205
Cdd:PRK12414 42 APDPALVEGVARAMR-DGHN--QYAPMAGIAALREALAEKTERlYGARYDPAsEVTVIASASEGLYAAISALVHPGDeVI 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 206 AIEsPCYFGIIELIESLGLKALEIPLCPDE-GIWLDDLAQALDEHdIKACVFSTSlNNPVGSFMPDAKREQLVALLEQRD 284
Cdd:PRK12414 119 YFE-PSFDSYAPIVRLQGATPVAIKLSPEDfRVNWDEVAAAITPR-TRMIIVNTP-HNPSATVFSAADLARLAQLTRNTD 195
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2200057096 285 VVLIEDDVYGDLHFTAKR----ATPAQAYSKKGLVitcASFSKT-AAPSYRIGWIIA 336
Cdd:PRK12414 196 IVILSDEVYEHVVFDGARhhsmARHRELAERSVIV---SSFGKSyHVTGWRVGYCLA 249
|
|
| PRK06107 |
PRK06107 |
aspartate transaminase; |
125-333 |
6.98e-07 |
|
aspartate transaminase;
Pssm-ID: 180403 Cd Length: 402 Bit Score: 51.27 E-value: 6.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 125 VAAAPTDKALARTMRRVMTL---------------AGASAIN-----YGPMDGFAPLKKQLIHRYLD-FGIGVDSDELVI 183
Cdd:PRK06107 19 TAAAARARELRAAGRSIVDLtvgepdfdtpdhikqAAVAAIErgetkYTLVNGTPALRKAIIAKLERrNGLHYADNEITV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 184 TNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPlCPDE-GIWLDdlAQALdEHDIKACVFSTSLN- 261
Cdd:PRK06107 99 GGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVA-CPEEqGFKLT--PEAL-EAAITPRTRWLILNa 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2200057096 262 --NPVGSFMPDAKREQLVA-LLEQRDVVLIEDDVYGDLHFTAKRATP--AQAYSKKGLVITCASFSKT-AAPSYRIGW 333
Cdd:PRK06107 175 psNPTGAVYSRAELRALADvLLRHPHVLVLTDDIYDHIRFDDEPTPHllAAAPELRDRVLVTNGVSKTyAMTGWRIGY 252
|
|
| GntR |
COG1802 |
DNA-binding transcriptional regulator, GntR family [Transcription]; |
13-75 |
8.67e-07 |
|
DNA-binding transcriptional regulator, GntR family [Transcription];
Pssm-ID: 441407 [Multi-domain] Cd Length: 222 Bit Score: 49.92 E-value: 8.67e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLpSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYF 75
Cdd:COG1802 12 LAEQVYEALREAILSGELPPGERL-SEAELAERLGVSRTPVREALRRLEAEGLVEIRPNRGAR 73
|
|
| PRK11523 |
PRK11523 |
transcriptional regulator ExuR; |
13-80 |
9.67e-07 |
|
transcriptional regulator ExuR;
Pssm-ID: 183176 [Multi-domain] Cd Length: 253 Bit Score: 50.23 E-value: 9.67e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSSQ 80
Cdd:PRK11523 9 LYQQLAAELKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQ 76
|
|
| avtA |
PRK09440 |
valine--pyruvate transaminase; Provisional |
151-472 |
1.31e-06 |
|
valine--pyruvate transaminase; Provisional
Pssm-ID: 236517 Cd Length: 416 Bit Score: 50.62 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 151 NYGPMDGFAPLKKQLIHRYLD-FGIGVDSDELVITNGAQEA--LAIALKCVAKPGDViaiespcyfgiielieslgLKAL 227
Cdd:PRK09440 69 NYDGPQGKDELIEALAALLNErYGWNISPQNIALTNGSQSAffYLFNLFAGRRADGS-------------------LKKI 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 228 EIPLCPD----EGIWLDDLA--------QALDEH---------------DIKACVFSTSlNNPVGSFMPDAKREQLVALL 280
Cdd:PRK09440 130 LFPLAPEyigyADAGLEEDLfvsyrpniELLPEGqfkyhvdfehlhideDTGAICVSRP-TNPTGNVLTDEELEKLDALA 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 281 EQRDVVLIEDDVYG----DLHFTakRATPAQAYSkkglVITCASFSKTAAPSYRIGWIIAgkfaeqARRHKRALSCSAPL 356
Cdd:PRK09440 209 RQHNIPLLIDNAYGppfpGIIFS--EATPLWNPN----IILCMSLSKLGLPGVRCGIVIA------DEEIIEALSNMNGI 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 357 IN-------QWTLYEFIASGEYDR----NIR-LLRQRLstnkERMIWCLQQYMPSCA-RISNPQGGCVIWV---DL--GS 418
Cdd:PRK09440 277 ISlapgrlgPAIAAEMIESGDLLRlsetVIRpFYRQKV----QLAIALLRRYLPDEPcLIHKPEGAIFLWLwfkDLpiTT 352
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2200057096 419 QydavKLFHLALEAGISITPGLIFSAGKKY-----RSCFRLSYgLPWSENLEQAIKTLS 472
Cdd:PRK09440 353 E----ELYQRLKARGVLVVPGHYFFPGLDEdwphaHQCIRMNY-VQDDEEIEKGIAILA 406
|
|
| PRK09148 |
PRK09148 |
LL-diaminopimelate aminotransferase; |
90-332 |
1.42e-06 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 181674 [Multi-domain] Cd Length: 405 Bit Score: 50.45 E-value: 1.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 90 RLSREPTTVnkqglIEQVYGAIHKA-----NVVPFGIANPVAAAP---TDKaLARTMRRvmtlagASAINYGPMDGFAPL 161
Cdd:PRK09148 6 RIRRLPPYV-----FEQVNRLKAAAraagaDIIDLGMGNPDLPTPqhiVDK-LCETAQD------PRTHRYSASKGIPGL 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 162 KKQLIHRY-LDFGIGVDSD-ELVITNGAQEALAIALKCVAKPGDVIAIESPCY----FGII---ELIESlglkaleIPLC 232
Cdd:PRK09148 74 RRAQAAYYaRRFGVKLNPDtQVVATLGSKEGFANMAQAITAPGDVILCPNPSYpihaFGFImagGVIRS-------VPAE 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 233 PDEGIWlddlaQALDehdiKACVFS----TSL-----NNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKrA 303
Cdd:PRK09148 147 PDEEFF-----PALE----RAVRHSipkpIALivnypSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGN-P 216
|
250 260 270
....*....|....*....|....*....|..
gi 2200057096 304 TPA--QAYSKKGLVITCASFSKT-AAPSYRIG 332
Cdd:PRK09148 217 PPSvlQVPGAKDVTVEFTSMSKTfSMAGWRMG 248
|
|
| PTZ00433 |
PTZ00433 |
tyrosine aminotransferase; Provisional |
179-345 |
2.14e-06 |
|
tyrosine aminotransferase; Provisional
Pssm-ID: 185613 Cd Length: 412 Bit Score: 49.79 E-value: 2.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 179 DELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKAlEIPLCPDEGIW---LDDLAQALDEHdIKACV 255
Cdd:PTZ00433 105 DNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEM-RFYNCRPEKDWeadLDEIRRLVDDR-TKALI 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 256 FsTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATP-AQAYSKKGLVITCASFSKTAAPSYRIGWI 334
Cdd:PTZ00433 183 M-TNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSvADFDTTVPRVILGGTAKNLVVPGWRLGWL 261
|
170
....*....|....*...
gi 2200057096 335 I-------AGKFAEQARR 345
Cdd:PTZ00433 262 LlvdphgnGGDFLDGMKR 279
|
|
| PRK08068 |
PRK08068 |
transaminase; Reviewed |
103-340 |
3.75e-06 |
|
transaminase; Reviewed
Pssm-ID: 181219 Cd Length: 389 Bit Score: 49.15 E-value: 3.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 103 LIEQVYGAI-HKANVVPFGIANPvaAAPTDKALARTMRRvmtlAGASAIN--YGPMDGFAPLKKQLIHRYLD-FGIGVDS 178
Cdd:PRK08068 20 LVAKVNKKVaEGHDVINLGQGNP--DQPTPEHIVEALQE----AAENPANhkYSPFRGYPFLKEAAADFYKReYGVTLDP 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 179 D-ELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGiWLDDLaQALDEHDIKAC--V 255
Cdd:PRK08068 94 EtEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENN-FLPDY-TKIPEEVAEKAklM 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 256 FSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRatPA---QAYSKKGLVITCASFSKTaapsYRI- 331
Cdd:PRK08068 172 YLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK--PVsflQTPGAKDVGIELYTLSKT----FNMa 245
|
....*....
gi 2200057096 332 GWIIAgkFA 340
Cdd:PRK08068 246 GWRVA--FA 252
|
|
| PRK05942 |
PRK05942 |
aspartate aminotransferase; Provisional |
120-304 |
4.89e-06 |
|
aspartate aminotransferase; Provisional
Pssm-ID: 180317 Cd Length: 394 Bit Score: 48.56 E-value: 4.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 120 GIANPVAAAP---TDKALArtmrrvmTLAGASAINYGPMDGFAPLKKQLIHRYL-DFGIGVDSD-ELVITNGAQEALA-I 193
Cdd:PRK05942 41 GMGNPDGAAPqpvIEAAIA-------ALADPQNHGYPPFEGTASFRQAITDWYHrRYGVELDPDsEALPLLGSKEGLThL 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 194 ALKCVaKPGDVIAIESPCYFGIIELIESLGLKALEIPLCPDEGiWLDDLAQALDEHDIKACVFSTSL-NNPVGSFMPDAK 272
Cdd:PRK05942 114 ALAYV-NPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPEND-WLIDLSSIPEEVAQQAKILYFNYpSNPTTATAPREF 191
|
170 180 190
....*....|....*....|....*....|..
gi 2200057096 273 REQLVALLEQRDVVLIEDDVYGDLHFTAKRAT 304
Cdd:PRK05942 192 FEEIVAFARKYEIMLVHDLCYAELAFDGYQPT 223
|
|
| PRK05839 |
PRK05839 |
succinyldiaminopimelate transaminase; |
172-356 |
9.24e-06 |
|
succinyldiaminopimelate transaminase;
Pssm-ID: 180281 Cd Length: 374 Bit Score: 47.76 E-value: 9.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 172 FGIGVDSDELVITNGAQEAL----AIALkcVAKPGDVIAIESPCYfGIIE--LIESlGLKALEIPLCPDegiwlDDLAQA 245
Cdd:PRK05839 77 FKIELKENELIPTFGTREVLfnfpQFVL--FDKQNPTIAYPNPFY-QIYEgaAIAS-RAKVLLMPLTKE-----NDFTPS 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 246 LDEHDIKAC--VFSTSLNNPVGSFMpdaKREQLVALLE---QRDVVLIEDDVYGDLHFTAKRATPAQAYSKKG------- 313
Cdd:PRK05839 148 LNEKELQEVdlVILNSPNNPTGRTL---SLEELIEWVKlalKHDFILINDECYSEIYENTPPPSLLEASILVGnesfknv 224
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2200057096 314 LVITcaSFSK-TAAPSYRIGWiIAG--KFAEQARRHKRALSCSAPL 356
Cdd:PRK05839 225 LVIN--SISKrSSAPGLRSGF-IAGdaSILKKYKAYRTYLGCASPL 267
|
|
| PRK09276 |
PRK09276 |
LL-diaminopimelate aminotransferase; Provisional |
172-474 |
1.26e-05 |
|
LL-diaminopimelate aminotransferase; Provisional
Pssm-ID: 181749 Cd Length: 385 Bit Score: 47.21 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 172 FGIGVDSDELVITN-GAQEALA-IALkCVAKPGDVIAIESPCY--FGIIELIEslGLKALEIPLCPDEGiWLDDLAQALD 247
Cdd:PRK09276 86 FGVELDPETEVISLiGSKEGIAhIPL-AFVNPGDVVLVPDPGYpvYKIGTIFA--GGEPYFMPLKEENG-FLPDLDAIPE 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 248 EHDIKA-CVFSTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRAtPA--QAYSKKGLVITCASFSKT 324
Cdd:PRK09276 162 DVAKKAkLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKP-PSflEVPGAKDVGIEFHSLSKT 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 325 AAPS-YRIGW------IIA--GKFAE-------QARRHK--RALSCSAPLINQwtlyefiasgeydrNIRLLRQRlstnK 386
Cdd:PRK09276 241 YNMTgWRIGFavgnadLIAglGKVKSnvdsgvfQAIQEAgiAALNGPQEVVEE--------------LRKIYQER----R 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 387 ERMIWCLQQYMPSCARisnPQGGCVIWVDLGSQYDAVKLFHLALE-AGISITPGLIF-SAGKKYrscFRLSYGLPwSENL 464
Cdd:PRK09276 303 DILVEGLRKLGLEVEP---PKATFYVWAPVPKGYTSAEFATLLLDkAGVVVTPGNGFgEYGEGY---FRIALTVP-DERI 375
|
330
....*....|
gi 2200057096 465 EQAIKTLSQL 474
Cdd:PRK09276 376 EEAVERIKKL 385
|
|
| PRK11402 |
PRK11402 |
transcriptional regulator PhoB; |
7-134 |
1.79e-05 |
|
transcriptional regulator PhoB;
Pssm-ID: 183118 [Multi-domain] Cd Length: 241 Bit Score: 45.98 E-value: 1.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 7 RSNSEFLYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSsqlnqsrP 86
Cdd:PRK11402 4 RYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKGTFVQS-------Q 76
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 2200057096 87 KrvrLSREPTTVNKQGLIEQVYGAIHKANVVPFGIanpVAAAPTDKAL 134
Cdd:PRK11402 77 K---VENALLTVSGFTDFGVSQGKATKEKVIEQER---VSAAPFCEKL 118
|
|
| PRK09764 |
PRK09764 |
GntR family transcriptional regulator; |
13-82 |
1.94e-05 |
|
GntR family transcriptional regulator;
Pssm-ID: 182065 [Multi-domain] Cd Length: 240 Bit Score: 45.97 E-value: 1.94e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 13 LYQQVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLKSSQLN 82
Cdd:PRK09764 6 LYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILESIQGSGTYVKEERVN 75
|
|
| PRK07366 |
PRK07366 |
LL-diaminopimelate aminotransferase; |
172-335 |
2.66e-05 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 180947 Cd Length: 388 Bit Score: 46.21 E-value: 2.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 172 FGIGVDSD-ELVITNGAQEALAIALKCVAKPGDVIAIESPCY---FGIIEL----IESLGLKAlEIPLCPD-EGIWLDDL 242
Cdd:PRK07366 85 FGLAVDPEtEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYpshAGGVYLaggqIYPMPLRA-ENDFLPVfADIPTEVL 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 243 AQAldehdiKACVFSTSlNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVYGDLHFTAKRATPA--QAYSKKGLVITCAS 320
Cdd:PRK07366 164 AQA------RLMVLSYP-HNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSilQADPEKSVSIEFFT 236
|
170 180
....*....|....*....|
gi 2200057096 321 FSKtaapSY-----RIGWII 335
Cdd:PRK07366 237 LSK----SYnmggfRIGFAI 252
|
|
| PLN02376 |
PLN02376 |
1-aminocyclopropane-1-carboxylate synthase |
174-452 |
3.00e-05 |
|
1-aminocyclopropane-1-carboxylate synthase
Pssm-ID: 178004 [Multi-domain] Cd Length: 496 Bit Score: 46.23 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 174 IGVDSDELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGI-IELIESLGLKALEIP--------LCPDEGIWLDDLAQ 244
Cdd:PLN02376 115 VTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFdRDLRWRTGVEIIPVPcsssdnfkLTVDAADWAYKKAQ 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 245 ALDEhDIKACVFsTSLNNPVGSFMPDAKREQLVALLEQRDVVLIEDDVY-------GDLHFTAKRATPAQ-AYSKKGLVI 316
Cdd:PLN02376 195 ESNK-KVKGLIL-TNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYaatvfagGDFVSVAEVVNDVDiSEVNVDLIH 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 317 TCASFSKTAA-PSYRIGwiIAGKFAEQARRHKRALSCSAPLINQWTLY--------EFIASGEYDRNIRL-LRQRLSTN- 385
Cdd:PLN02376 273 IVYSLSKDMGlPGFRVG--IVYSFNDSVVSCARKMSSFGLVSSQTQLMlasmlsddQFVDNFLMESSRRLgIRHKVFTTg 350
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2200057096 386 -KERMIWCLQQympscarisnpQGGCVIWVDL-------GSQYDAVKLFHLALE-AGISITPGLIFSAGKK--YRSCF 452
Cdd:PLN02376 351 iKKADIACLTS-----------NAGLFAWMDLrhllrdrNSFESEIELWHIIIDkVKLNVSPGSSFRCTEPgwFRICF 417
|
|
| YcjR |
COG1082 |
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism]; |
214-282 |
3.99e-04 |
|
Sugar phosphate isomerase/epimerase [Carbohydrate transport and metabolism];
Pssm-ID: 440699 [Multi-domain] Cd Length: 254 Bit Score: 41.92 E-value: 3.99e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 214 GIIELIESLGLKALEIPLCPDEGIWLDDLAQALDEHDIKAcvfsTSLNNPVGSFMPD-AKREQLVALLEQ 282
Cdd:COG1082 17 EALRAAAELGYDGVELAGGDLDEADLAELRAALADHGLEI----SSLHAPGLNLAPDpEVREAALERLKR 82
|
|
| PRK06290 |
PRK06290 |
LL-diaminopimelate aminotransferase; |
119-336 |
4.14e-04 |
|
LL-diaminopimelate aminotransferase;
Pssm-ID: 235772 Cd Length: 410 Bit Score: 42.72 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 119 FGIANPVAAAPTDkalartMRRVMTLAGASAINYGPMDGFAPLKKQLIHRYLD--FGI-GVDSDELVITN-GAQEALAIA 194
Cdd:PRK06290 49 MGVGEPDEMADES------VVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEkvFGVkDIDPVTEVIHSiGSKPALAML 122
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 195 LKCVAKPGDVIAIESPCYFGIIELIESLGLKALEIPLCpDEGIWLDDLAQALDEHDIKACVFSTSL-NNPVGSFMPDAKR 273
Cdd:PRK06290 123 PSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLL-EENNFLPDLDSIPKDIKEKAKLLYLNYpNNPTGAVATKEFY 201
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2200057096 274 EQLVALLEQRDVVLIEDDVYGDLHFTAKRATPAQAYSKKGLVITCASFSKtaapSYR-IGWIIA 336
Cdd:PRK06290 202 EEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSK----AYNmTGWRLA 261
|
|
| PRK09990 |
PRK09990 |
DNA-binding transcriptional regulator GlcC; Provisional |
16-86 |
4.39e-04 |
|
DNA-binding transcriptional regulator GlcC; Provisional
Pssm-ID: 182186 [Multi-domain] Cd Length: 251 Bit Score: 42.06 E-value: 4.39e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2200057096 16 QVIQLVRDLCLQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAREKSGYFLksSQLNQSRP 86
Cdd:PRK09990 11 VVAERIERLIVDGVLKVGQALPSERRLCEKLGFSRSALREGLTVLRGRGIIETAQGRGSFV--ARLNRVQD 79
|
|
| CsdA |
COG0520 |
Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]; |
174-248 |
4.76e-04 |
|
Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism];
Pssm-ID: 440286 [Multi-domain] Cd Length: 396 Bit Score: 42.43 E-value: 4.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 174 IGVDS-DELVITNGAQEALAIALKCVA--KPGDVIAIeSPC-YFGII----ELIESLGLKALEIPLCPDEGIWLDDLAQA 245
Cdd:COG0520 72 IGAASpDEIIFTRGTTEAINLVAYGLGrlKPGDEILI-TEMeHHSNIvpwqELAERTGAEVRVIPLDEDGELDLEALEAL 150
|
...
gi 2200057096 246 LDE 248
Cdd:COG0520 151 LTP 153
|
|
| PRK03837 |
PRK03837 |
transcriptional regulator NanR; Provisional |
3-110 |
5.14e-04 |
|
transcriptional regulator NanR; Provisional
Pssm-ID: 235166 [Multi-domain] Cd Length: 241 Bit Score: 41.55 E-value: 5.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 3 QVISRSNSEFLYQQVIQLVRdlclQGSLLPGEKLPSLRKMADKLNISIPTVKQAYQLLEGQGLIEAReksgyflkssqlN 82
Cdd:PRK03837 8 PIARKKLSEEVEERLEQMIR----SGEFGPGDQLPSERELMAFFGVGRPAVREALQALKRKGLVQIS------------H 71
|
90 100
....*....|....*....|....*...
gi 2200057096 83 QSRPKRVRLSREpttvnkqGLIEQVYGA 110
Cdd:PRK03837 72 GERARVSRPSAD-------TIIGQLSGM 92
|
|
| PRK03321 |
PRK03321 |
putative aminotransferase; Provisional |
147-336 |
1.57e-03 |
|
putative aminotransferase; Provisional
Pssm-ID: 179559 Cd Length: 352 Bit Score: 40.72 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 147 ASAINYGPMDGFAPLKKQLIHRYldfgiGVDSDELVITNGAQEALAIALKCVAKPGD--VIAIES-PCYFGIIELIeslG 223
Cdd:PRK03321 48 AAGVNRYPDMGAVELRAALAEHL-----GVPPEHVAVGCGSVALCQQLVQATAGPGDevIFAWRSfEAYPILVQVA---G 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 224 LKALEIPLCPDEGIWLDDLAQALDEHdiKACVFSTSLNNPVGSFMPdakREQLVALLEQ--RDVVLIEDDVYGdlHFTAK 301
Cdd:PRK03321 120 ATPVQVPLTPDHTHDLDAMAAAITDR--TRLIFVCNPNNPTGTVVT---PAELARFLDAvpADVLVVLDEAYV--EYVRD 192
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2200057096 302 RATP--AQAYSKKGLVITCASFSKtaapSY-----RIGWIIA 336
Cdd:PRK03321 193 DDVPdgLELVRDHPNVVVLRTFSK----AYglaglRVGYAVG 230
|
|
| AAT_I |
cd01494 |
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ... |
179-301 |
3.03e-03 |
|
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).
Pssm-ID: 99742 [Multi-domain] Cd Length: 170 Bit Score: 38.52 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 179 DELVITNGAQEALAIALKCVAKPGDVIAIESPCYFGIIELI-ESLGLKALEIPLCPD-EGIWLDDLAQALDEHDIKACVF 256
Cdd:cd01494 18 DKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAaELAGAKPVPVPVDDAgYGGLDVAILEELKAKPNVALIV 97
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2200057096 257 STSLNNPVGSFMPDAKreqLVALLEQRDVVLIEDDVYGDLHFTAK 301
Cdd:cd01494 98 ITPNTTSGGVLVPLKE---IRKIAKEYGILLLVDAASAGGASPAP 139
|
|
| AP_endonuc_2 |
pfam01261 |
Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose ... |
216-282 |
3.65e-03 |
|
Xylose isomerase-like TIM barrel; This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.
Pssm-ID: 426164 [Multi-domain] Cd Length: 248 Bit Score: 38.89 E-value: 3.65e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2200057096 216 IELIESLGLKALEIPLC-----PDEGIWLDDLAQALDEHDIKACVFSTSLNNPVGSfMPDAKREQLVALLEQ 282
Cdd:pfam01261 1 LAAAAELGFDGVELFTRrwfrpPLSDEEAEELKAALKEHGLEIVVHAPYLGDNLAS-PDEEEREKAIDRLKR 71
|
|
| PTZ00377 |
PTZ00377 |
alanine aminotransferase; Provisional |
173-293 |
3.85e-03 |
|
alanine aminotransferase; Provisional
Pssm-ID: 240391 [Multi-domain] Cd Length: 481 Bit Score: 39.56 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200057096 173 GIGVDSDELVITNGAQEALAIALKC-VAKPGDVIAI---ESPCYFGIIELiesLGLKALEIPLCPDEGiW---LDDLAQA 245
Cdd:PTZ00377 133 GVPKDPSDIFLTDGASSGIKLLLQLlIGDPSDGVMIpipQYPLYSAAITL---LGGKQVPYYLDEEKG-WsldQEELEEA 208
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 2200057096 246 LDEH-----DIKACVFstsLN--NPVGSFMPDAKREQLVALLEQRDVVLIEDDVY 293
Cdd:PTZ00377 209 YEQAvrngiTPRALVV---INpgNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVY 260
|
|
| |
