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Conserved domains on  [gi|2200069086|ref|WP_239966687|]
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MULTISPECIES: DUF2730 family protein [Pseudoalteromonas]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2730 super family cl12395
Protein of unknown function (DUF2730); This family of proteins with unknown function appears ...
 3-97 1.10e-13

Protein of unknown function (DUF2730); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


The actual alignment was detected with superfamily member pfam10805:

Pssm-ID: 402439  Cd Length: 101  Bit Score: 61.25  E-value: 1.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200069086   3 EFLLEWWKqMLAAGVVIVGAGSIAWLRATFVSRAKHDEL-------ERRVHAVERRVEDMPSAEDFHGLEKSLLEVGGKI 75
Cdd:pfam10805   1 EFLKKNWG-IIWAVISLFGAVIWLLLSKTYAKREDLEKLadkveehDKRLTELEIKVDNLPTAKDLHRLQLLLTDLRGEL 79

                          90       100
                  ....*....|....*....|..
gi 2200069086  76 DALSPQLVTLQNTTSLLMENEL 97
Cdd:pfam10805  80 KALRAEIRQISHQSDLLLENEL 101
 
Name Accession Description Interval E-value
DUF2730 pfam10805
Protein of unknown function (DUF2730); This family of proteins with unknown function appears ...
 3-97 1.10e-13

Protein of unknown function (DUF2730); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


Pssm-ID: 402439  Cd Length: 101  Bit Score: 61.25  E-value: 1.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200069086   3 EFLLEWWKqMLAAGVVIVGAGSIAWLRATFVSRAKHDEL-------ERRVHAVERRVEDMPSAEDFHGLEKSLLEVGGKI 75
Cdd:pfam10805   1 EFLKKNWG-IIWAVISLFGAVIWLLLSKTYAKREDLEKLadkveehDKRLTELEIKVDNLPTAKDLHRLQLLLTDLRGEL 79

                          90       100
                  ....*....|....*....|..
gi 2200069086  76 DALSPQLVTLQNTTSLLMENEL 97
Cdd:pfam10805  80 KALRAEIRQISHQSDLLLENEL 101
 
Name Accession Description Interval E-value
DUF2730 pfam10805
Protein of unknown function (DUF2730); This family of proteins with unknown function appears ...
 3-97 1.10e-13

Protein of unknown function (DUF2730); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


Pssm-ID: 402439  Cd Length: 101  Bit Score: 61.25  E-value: 1.10e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2200069086   3 EFLLEWWKqMLAAGVVIVGAGSIAWLRATFVSRAKHDEL-------ERRVHAVERRVEDMPSAEDFHGLEKSLLEVGGKI 75
Cdd:pfam10805   1 EFLKKNWG-IIWAVISLFGAVIWLLLSKTYAKREDLEKLadkveehDKRLTELEIKVDNLPTAKDLHRLQLLLTDLRGEL 79

                          90       100
                  ....*....|....*....|..
gi 2200069086  76 DALSPQLVTLQNTTSLLMENEL 97
Cdd:pfam10805  80 KALRAEIRQISHQSDLLLENEL 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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