|
Name |
Accession |
Description |
Interval |
E-value |
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
159-639 |
2.75e-123 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 372.63 E-value: 2.75e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPEKlldmtqavrdivtkytsmkpcskavadlqetvkkqlaahdAAGKk 238
Cdd:COG1053 24 EAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQK----------------------------------------AAGE- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 239 yifDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQSdMTWFHVPRHWIDVGIGGLYPRGQWPRQADGKtpis 318
Cdd:COG1053 63 ---DSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEAQG-VPFSRTPDGRLPQFGGHSVGRTCYAGDGTGH---- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 319 tydAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKYN-NISV 397
Cdd:COG1053 135 ---ALLATLYQAALRLGVEIFTETEVLDLIVD-DGRVVGVVARDRTGEIVRIRAKAVVLATGGFGRNYEMRAEYLpEAEG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 398 IATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILE 477
Cdd:COG1053 211 ALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDGGLISEGARGKPGGILVNKEGERFMNEYAPRDVVSRAILE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 478 QPGQVVYSIFDQETINqkkvrddLIQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDTKGLSVpkil 556
Cdd:COG1053 291 EIDEPAYLVLDLRHRR-------RLEEYLEAGYLVKADTIEELAAKLGIDAAELAATVARYNAAAKAgVDPRGTCL---- 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 557 igMPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAGLEV 636
Cdd:COG1053 360 --GPIKEGPFYAIPVRPGVHYTMGGLRVDADARVLDADGTPIPGLYAAGEAAGSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
...
gi 2205811505 637 TAH 639
Cdd:COG1053 438 AEY 440
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
162-633 |
6.69e-96 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 301.57 E-value: 6.69e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 162 AKVIVLEKMAMLGGNTARSEGNMSAmdpnpeklldmtqavrdivtkytsmkpcskAVADLQEtvkkqlaahdaagKKYIF 241
Cdd:TIGR01813 24 ANVVLLEKMPVIGGNSAIAAGGMNA------------------------------AGTDQQK-------------ALGIE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQSDMTWFHVprhwIDVGiGGLYPRGQWPRqadGKTPISTYd 321
Cdd:TIGR01813 61 DSPELFIKDTLKGGRGINDPELVRILAEESKDAVDWLQDGVGARLDDL----IQLG-GHSVPRAHRPT---GGAASGAE- 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 322 aYIAPLSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKYN-NISVIAT 400
Cdd:TIGR01813 132 -IVQTLYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVKGKGKGIYIKAAKAVVLATGGFGSNKEMIAKYDpTLKHLGS 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 401 SNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILEQPG 480
Cdd:TIGR01813 211 TNQPGATGDGLLMAEKIGAALVDMDYIQAHPTASPDEGGFLISEAVRGYGAILVNKTGERFMNELATRDKVSDAILAQPG 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 481 QVVYSIFDQETINqkkvRDDLIQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAAQDTKGLSVPkilIGMP 560
Cdd:TIGR01813 291 KDAYLIFDDDVYK----KAKMVDNYYRLGVAYKGDSLEELAKQFGIPAAALKQTIKDYNGYVASGKDTPFGRP---MDMP 363
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2205811505 561 V--TKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:TIGR01813 364 TdlSKAPYYAIKVTPGVHHTMGGVKINTKAEVLDANGKPIPGLFAAGEVTGGVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
68-638 |
7.03e-70 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 235.50 E-value: 7.03e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 68 GIGSLAVEALPAAIVAQQTSSVDvvSGATMTSNAIIKAVSEALKQAGADASFFKKKTDakssdkalpletqadVIIVGGG 147
Cdd:PRK06481 8 TLGMLLLLALILVGCGSNTTSKS--DSSSSKESEKTEVTSGASKTSYTDPSELKDKYD---------------IVIVGAG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 148 GAGMVAAATAVERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPEKlldmtqavrdivtkytsmkpcskavadlqetvkk 227
Cdd:PRK06481 71 GAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQK---------------------------------- 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 228 qlaahdaagKKYIFDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQ----SDMTwfhvprhwidvgIGGLYP 303
Cdd:PRK06481 117 ---------AQGIADSNDKFYEETLKGGGGTNDKALLRYFVDNSASAIDWLDSMgiklDNLT------------ITGGMS 175
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 304 RGQWPRQADGktpiSTYDAYIAP-LSKKVKAAGSTIYTSMKVTEIErDPSGRVTGVKAVDVKGAPHIFSGKNVILAAGGY 382
Cdd:PRK06481 176 EKRTHRPHDG----SAVGGYLVDgLLKNVQERKIPLFVNADVTKIT-EKDGKVTGVKVKINGKETKTISSKAVVVTTGGF 250
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 383 GANLQMVKKYN-NISVIATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRPQDTPYVNKLGLRF 461
Cdd:PRK06481 251 GANKDMIAKYRpDLKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGE-AVRGEGAILVNQKGKRF 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 462 VDETGRRDEISHGILEQPGQVVYSIFDQETINQKKVRDDLIQialsHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAA 541
Cdd:PRK06481 330 GNELDTRDKVSAAINKLPEKYAYVVFDSGVKDRVKAIAQYEE----KGFVEEGKTIDELAKKINVPAETLTKTLDTWNKA 405
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 542 AAAQDTKGLSVPKiliGMP--VTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGR 619
Cdd:PRK06481 406 VKNKKDEAFGRTT---GMDndLSTGPYYAIKIAPGIHYTMGGVKINTNTEVLKKDGSPITGLYAAGEVTGGLHGENRIGG 482
|
570
....*....|....*....
gi 2205811505 620 NALTDLLVFGHIAGLEVTA 638
Cdd:PRK06481 483 NSVADIIIFGRQAGTQSAE 501
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
159-622 |
5.80e-42 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 156.68 E-value: 5.80e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPeklldmtqavrdivtkytsmkpcskavadlqetvkkqlaahdAAGKk 238
Cdd:pfam00890 20 EAGLKVAVVEKGQPFGGATAWSSGGIDALGNPP------------------------------------------QGGI- 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 239 yifDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQsDMTWFHVPRHWIDV-GIGGLYPRGQWPRQ-ADGKTP 316
Cdd:pfam00890 57 ---DSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEAL-GVPFSRTEDGHLDLrPLGGLSATWRTPHDaADRRRG 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 317 ISTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDPsGRVTGVKAVDVK-GAPH-IFSGKNVILAAGGYGANLQMVKKYNN 394
Cdd:pfam00890 133 LGTGHALLARLLEGLRKAGVDFQPRTAADDLIVED-GRVTGAVVENRRnGREVrIRAIAAVLLATGGFGRLAELLLPAAG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 395 isVIATSNQPGTTGEVLEAAVKAGAALEG--MQWIQIHPHG----NPKNGELESAIAGrpqdtP---YVNKLGLRFVDET 465
Cdd:pfam00890 212 --YADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSlvgiRLGSGLLIEALRG-----EggiLVNKDGRRFMNEL 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 466 GRRDEIS-----HGILEQPGQVVYSIFDqetinqkkvrddliqialshgyaykadtledlakaAGIDEKGFAQTMKAYNA 540
Cdd:pfam00890 285 ASRDVVSraitrNEIDEGRGANVYLDAS-----------------------------------GSLDAEGLEATLPAINE 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 541 AaaaqdtkglsvPKILIGMPVTKAPfyaVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEIT-GGIHGGNRLGR 619
Cdd:pfam00890 330 E-----------AIFGLDVDPYDRP---IPVFPAQHYTMGGVRTDENGRVLDADGQPIPGLYAAGEVAcGGVHGANRLGG 395
|
...
gi 2205811505 620 NAL 622
Cdd:pfam00890 396 NSL 398
|
|
| COG3976 |
COG3976 |
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction ... |
28-115 |
3.73e-31 |
|
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction only];
Pssm-ID: 443175 Cd Length: 116 Bit Score: 117.31 E-value: 3.73e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 28 MTPGVYSAAVPARNGELAVEVQVSADRIESVKVVRQQETPGIGSLAVEALPAAIVAQQTSSVDVVSGATMTSNAIIKAVS 107
Cdd:COG3976 29 YKDGTYTGTAQGFNGDVTVEVTVSDGKITDIEVLEHGETPGIGDKAIEELPDEIVEAQSLDVDAVSGATLTSKAIKEAVE 108
|
....*...
gi 2205811505 108 EALKQAGA 115
Cdd:COG3976 109 DALEQAGG 116
|
|
| FMN_bind |
pfam04205 |
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ... |
41-110 |
4.19e-13 |
|
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.
Pssm-ID: 461226 [Multi-domain] Cd Length: 71 Bit Score: 64.55 E-value: 4.19e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2205811505 41 NGELAVEVQVSAD-RIESVKVVRQQETPGIGSLAVEALPAAIVAQQtsSVDVVSGATMTSNAIIKAVSEAL 110
Cdd:pfam04205 3 GGPITVLVGVDGDgTITGIKVLEHSETPGLGIKEQKVKKDKIEGGQ--DVDAISGATITSRAVVEAVKNAL 71
|
|
| FMN_bind |
smart00900 |
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR ... |
43-110 |
7.82e-13 |
|
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins;
Pssm-ID: 214897 [Multi-domain] Cd Length: 86 Bit Score: 64.29 E-value: 7.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 43 ELAVEVQVSADRIESVKVVRQQETPG-----------IGSLAVEALPAAIVAQQTS-SVDVVSGATMTSNAIIKAVSEAL 110
Cdd:smart00900 7 TVLVTVKDDKGKITGVKVLEHKETPGdgidepkwigqFAGKALEKLAKEIVKKQSGgDVDAISGATITSRAVKDAVKRAL 86
|
|
| rnfG |
TIGR01947 |
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in ... |
32-122 |
3.18e-05 |
|
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit. [Energy metabolism, Electron transport]
Pssm-ID: 273889 [Multi-domain] Cd Length: 186 Bit Score: 45.04 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 32 VYSAAVPARNGELAVEVQVSAD-RIESVKVVRQQETPGIG-----------------SLAVEALPAAIVAQQTSSVDVVS 93
Cdd:TIGR01947 85 VLEVSAPGYSGPIQLLVGIDKDgTILGVRVLSHKETPGLGdkielrisdwiegfagkSLADPDDDHWAVKKDGGQFDQFT 164
|
90 100
....*....|....*....|....*....
gi 2205811505 94 GATMTSNAIIKAVSEALkqagadaSFFKK 122
Cdd:TIGR01947 165 GATITPRAVVNAVKRAL-------RYFKE 186
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
159-639 |
2.75e-123 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 372.63 E-value: 2.75e-123
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPEKlldmtqavrdivtkytsmkpcskavadlqetvkkqlaahdAAGKk 238
Cdd:COG1053 24 EAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQK----------------------------------------AAGE- 62
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 239 yifDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQSdMTWFHVPRHWIDVGIGGLYPRGQWPRQADGKtpis 318
Cdd:COG1053 63 ---DSPEEHFYDTVKGGDGLADQDLVEALAEEAPEAIDWLEAQG-VPFSRTPDGRLPQFGGHSVGRTCYAGDGTGH---- 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 319 tydAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKYN-NISV 397
Cdd:COG1053 135 ---ALLATLYQAALRLGVEIFTETEVLDLIVD-DGRVVGVVARDRTGEIVRIRAKAVVLATGGFGRNYEMRAEYLpEAEG 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 398 IATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILE 477
Cdd:COG1053 211 ALSTNAPGNTGDGIAMALRAGAALADMEFVQFHPTGLPGDGGLISEGARGKPGGILVNKEGERFMNEYAPRDVVSRAILE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 478 QPGQVVYSIFDQETINqkkvrddLIQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDTKGLSVpkil 556
Cdd:COG1053 291 EIDEPAYLVLDLRHRR-------RLEEYLEAGYLVKADTIEELAAKLGIDAAELAATVARYNAAAKAgVDPRGTCL---- 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 557 igMPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAGLEV 636
Cdd:COG1053 360 --GPIKEGPFYAIPVRPGVHYTMGGLRVDADARVLDADGTPIPGLYAAGEAAGSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
...
gi 2205811505 637 TAH 639
Cdd:COG1053 438 AEY 440
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
162-633 |
6.69e-96 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 301.57 E-value: 6.69e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 162 AKVIVLEKMAMLGGNTARSEGNMSAmdpnpeklldmtqavrdivtkytsmkpcskAVADLQEtvkkqlaahdaagKKYIF 241
Cdd:TIGR01813 24 ANVVLLEKMPVIGGNSAIAAGGMNA------------------------------AGTDQQK-------------ALGIE 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQSDMTWFHVprhwIDVGiGGLYPRGQWPRqadGKTPISTYd 321
Cdd:TIGR01813 61 DSPELFIKDTLKGGRGINDPELVRILAEESKDAVDWLQDGVGARLDDL----IQLG-GHSVPRAHRPT---GGAASGAE- 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 322 aYIAPLSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKYN-NISVIAT 400
Cdd:TIGR01813 132 -IVQTLYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVKGKGKGIYIKAAKAVVLATGGFGSNKEMIAKYDpTLKHLGS 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 401 SNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILEQPG 480
Cdd:TIGR01813 211 TNQPGATGDGLLMAEKIGAALVDMDYIQAHPTASPDEGGFLISEAVRGYGAILVNKTGERFMNELATRDKVSDAILAQPG 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 481 QVVYSIFDQETINqkkvRDDLIQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAAQDTKGLSVPkilIGMP 560
Cdd:TIGR01813 291 KDAYLIFDDDVYK----KAKMVDNYYRLGVAYKGDSLEELAKQFGIPAAALKQTIKDYNGYVASGKDTPFGRP---MDMP 363
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2205811505 561 V--TKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:TIGR01813 364 TdlSKAPYYAIKVTPGVHHTMGGVKINTKAEVLDANGKPIPGLFAAGEVTGGVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
68-638 |
7.03e-70 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 235.50 E-value: 7.03e-70
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 68 GIGSLAVEALPAAIVAQQTSSVDvvSGATMTSNAIIKAVSEALKQAGADASFFKKKTDakssdkalpletqadVIIVGGG 147
Cdd:PRK06481 8 TLGMLLLLALILVGCGSNTTSKS--DSSSSKESEKTEVTSGASKTSYTDPSELKDKYD---------------IVIVGAG 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 148 GAGMVAAATAVERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPEKlldmtqavrdivtkytsmkpcskavadlqetvkk 227
Cdd:PRK06481 71 GAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQK---------------------------------- 116
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 228 qlaahdaagKKYIFDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQ----SDMTwfhvprhwidvgIGGLYP 303
Cdd:PRK06481 117 ---------AQGIADSNDKFYEETLKGGGGTNDKALLRYFVDNSASAIDWLDSMgiklDNLT------------ITGGMS 175
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 304 RGQWPRQADGktpiSTYDAYIAP-LSKKVKAAGSTIYTSMKVTEIErDPSGRVTGVKAVDVKGAPHIFSGKNVILAAGGY 382
Cdd:PRK06481 176 EKRTHRPHDG----SAVGGYLVDgLLKNVQERKIPLFVNADVTKIT-EKDGKVTGVKVKINGKETKTISSKAVVVTTGGF 250
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 383 GANLQMVKKYN-NISVIATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRPQDTPYVNKLGLRF 461
Cdd:PRK06481 251 GANKDMIAKYRpDLKGYVTTNQEGSTGDGIKMIEKLGGTTVDMDQIQIHPTVQQSKSYLIGE-AVRGEGAILVNQKGKRF 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 462 VDETGRRDEISHGILEQPGQVVYSIFDQETINQKKVRDDLIQialsHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAA 541
Cdd:PRK06481 330 GNELDTRDKVSAAINKLPEKYAYVVFDSGVKDRVKAIAQYEE----KGFVEEGKTIDELAKKINVPAETLTKTLDTWNKA 405
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 542 AAAQDTKGLSVPKiliGMP--VTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGR 619
Cdd:PRK06481 406 VKNKKDEAFGRTT---GMDndLSTGPYYAIKIAPGIHYTMGGVKINTNTEVLKKDGSPITGLYAAGEVTGGLHGENRIGG 482
|
570
....*....|....*....
gi 2205811505 620 NALTDLLVFGHIAGLEVTA 638
Cdd:PRK06481 483 NSVADIIIFGRQAGTQSAE 501
|
|
| PRK08274 |
PRK08274 |
FAD-dependent tricarballylate dehydrogenase TcuA; |
159-639 |
1.86e-48 |
|
FAD-dependent tricarballylate dehydrogenase TcuA;
Pssm-ID: 236214 [Multi-domain] Cd Length: 466 Bit Score: 176.22 E-value: 1.86e-48
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKM--AMLGGNTARSeGNMSAMdpnpeklldmtqavrdivtkytsmkpcskavadlqetvkkqlaaHDAAG 236
Cdd:PRK08274 25 EAGASVLLLEAAprEWRGGNSRHT-RNLRCM--------------------------------------------HDAPQ 59
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 237 KkYIFDS---PELFA-LQTIEGGDChsDPKLVLTMTQNATAAMNWLESQSdmTWFHVPR----HWIDvgiGGLYPRGqwp 308
Cdd:PRK08274 60 D-VLVGAypeEEFWQdLLRVTGGRT--DEALARLLIRESSDCRDWMRKHG--VRFQPPLsgalHVAR---TNAFFWG--- 128
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 309 rqaDGKTPISTYDAYiaplskkVKAAGSTIYTSMKVTEIERDpSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQM 388
Cdd:PRK08274 129 ---GGKALVNALYRS-------AERLGVEIRYDAPVTALELD-DGRFVGARAGSAAGGAERIRAKAVVLAAGGFESNREW 197
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 389 VKKY-----NNISVIATsnqPGTTGEVLEAAVKAGAALEGmQWIQIHPHG----NPKNGeleSAIAGRPQDTPY---VNK 456
Cdd:PRK08274 198 LREAwgqpaDNFLVRGT---PYNQGDLLKALLDAGADRIG-DPSQCHAVAidarAPLYD---GGICTRIDCVPLgivVNR 270
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 457 LGLRFVDET-----------GRRdeishgILEQPGQVVYSIFDQETINQkkvrddliqiALSHGYA-YKADTLEDLAKAA 524
Cdd:PRK08274 271 DGERFYDEGedfwpkryaiwGRL------VAQQPGQIAYQIFDAKAIGR----------FMPPVFPpIQADTLEELAEKL 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 525 GIDEKGFAQTMKAYNAAAAAQD----------TKGLSVPKILIGMPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDK 594
Cdd:PRK08274 335 GLDPAAFLRTVAAFNAAVRPGPfdptvlddcgTEGLTPPKSHWARPIDTPPFYAYPVRPGITFTYLGLKVDEDARVRFAD 414
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 2205811505 595 GNPIPGLFAAGEITggihGGNRLGRN-----ALTDLLVFGHIAGLEVTAH 639
Cdd:PRK08274 415 GRPSPNLFAAGEMM----AGNVLGKGypagvGLTIGAVFGRIAGEEAARH 460
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
161-633 |
1.49e-46 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 177.28 E-value: 1.49e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 161 GAKVIVLEKMAMLGGNTARSEGNMSAMDPNpeklldmTQAVRDIVtkytsmkpcskavadlqetvkkqlaahdaagkkyi 240
Cdd:PTZ00306 432 GAQVILLEKEAKLGGNSAKATSGINGWGTR-------AQAKQDVL----------------------------------- 469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 241 fDSPELFALQTIEGG-DCHSDPKLVLTMTQNATAAMNWLESqsdmtwFHVPRHWIDVGIGGLYPRG-QWPRQADGkTPI- 317
Cdd:PTZ00306 470 -DGGKFFERDTHLSGkGGHCDPGLVKTLSVKSADAISWLSS------LGVPLTVLSQLGGASRKRChRAPDKKDG-TPVp 541
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 318 ------STYDAYI-APLSKKVkaagsTIYTSMKVTEIERD----PSG----RVTGV---KAVDVKGAPHIFSGKNVILAA 379
Cdd:PTZ00306 542 igftimRTLEDHIrTKLSGRV-----TIMTETTVTSLLSEssarPDGvreiRVTGVrykQASDASGQVMDLLADAVILAT 616
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 380 GGYG----ANLQMVKKYNNISVIATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHG--NPKNGELESAIAG----RPQ 449
Cdd:PTZ00306 617 GGFSndhtPNSLLREYAPQLSGFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGliDPKDPSNRTKYLGpealRGS 696
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 450 DTPYVNKLGLRFVDETGRRDEISHGILEQ----PG----QVVYSIFDQETINQKKVRddliqialSHGYAYK-------A 514
Cdd:PTZ00306 697 GGVLLNKNGERFVNELDLRSVVSQAIIAQgneyPGsggsKFAYCVLNEAAAKLFGKN--------SLGFYWKrlglfqrV 768
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 515 DTLEDLAKAAGIDEKGFAQTMKAYNAAAAAQDT---KGLSVPKILIGmpvTKAPFYAVPLTTTIHHTMGG---------L 582
Cdd:PTZ00306 769 DDVKGLAKLIGCPVENLHRTLETYERLSTKKVAcplTGKVVFPCVVG---TQGPYYVAFVTPSIHYTMGGclispsaemQ 845
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 2205811505 583 RINEKTQVLDDKgNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PTZ00306 846 MEDNSVNIFEDR-RPILGLFGAGEVTGGVHGGNRLGGNSLLECVVFGKIAG 895
|
|
| PRK07121 |
PRK07121 |
FAD-binding protein; |
159-633 |
1.25e-44 |
|
FAD-binding protein;
Pssm-ID: 180854 [Multi-domain] Cd Length: 492 Bit Score: 166.22 E-value: 1.25e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPEklldmtqavrdivtkytsmkpcskavadlqetvkkQLAA-HDaagk 237
Cdd:PRK07121 41 AAGARVLVLERAAGAGGATALSGGVIYLGGGTAV-----------------------------------QKAAgFE---- 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 238 kyifDSPE-LFALQTIEGGDCHSDPKLVLtMTQNATAAMNWLESQSdmtwfhVP--------RHWIDVGIGGLY------ 302
Cdd:PRK07121 82 ----DSPEnMYAYLRVAVGPGVDEEKLRR-YCEGSVEHFDWLEGLG------VPfersffpeKTSYPPNDEGLYysgnek 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 303 -----------PRGQWPrQADGKTPISTydAYIAPLSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVKGAPHIFS 371
Cdd:PRK07121 151 awpfaeiakpaPRGHRV-QGPGDSGGGA--MLMDPLAKRAAALGVQIRYDTRATRLIVDDDGRVVGVEARRYGETVAIRA 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 372 GKNVILAAGGYGANLQMVKKY----NNISVIATSNQPGTTgevLEAAVKAGAALEGMQ----WIQIHPhgnpkngelesa 443
Cdd:PRK07121 228 RKGVVLAAGGFAMNREMVARYapayAGGLPLGTTGDDGSG---IRLGQSAGGATAHMDqvfaWRFIYP------------ 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 444 iagrPQDTPY---VNKLGLRFVDETGRRDEISHGILEQPGQVVYSIFDQETINQKKvRDDLIQIALSHGYAYKADTLEDL 520
Cdd:PRK07121 293 ----PSALLRgilVNARGQRFVNEDTYGARIGQFILEQPGGTAYLIVDEALFEEAR-AQLRPQIDGRTPGAWKAETVEEL 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 521 AKAAGIDEKGFAQTMKAYNAAAAAQDTKGLSVPKILIGmPVTKAPFYAVPLTT----TIHHTMGGLRINEKT-QVLDDKG 595
Cdd:PRK07121 368 ARKLGIPPGGLQATVDAYNRAAAGGEDPPFHKQPEWLR-PLDTGPFAAIDLSLgkapTPGFTLGGLRVDEDTgEVLRADG 446
|
490 500 510
....*....|....*....|....*....|....*...
gi 2205811505 596 NPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PRK07121 447 APIPGLYAAGRCASGIASNGYVSGLSLADCSFFGRRAG 484
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
159-622 |
5.80e-42 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 156.68 E-value: 5.80e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNPeklldmtqavrdivtkytsmkpcskavadlqetvkkqlaahdAAGKk 238
Cdd:pfam00890 20 EAGLKVAVVEKGQPFGGATAWSSGGIDALGNPP------------------------------------------QGGI- 56
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 239 yifDSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQsDMTWFHVPRHWIDV-GIGGLYPRGQWPRQ-ADGKTP 316
Cdd:pfam00890 57 ---DSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEAL-GVPFSRTEDGHLDLrPLGGLSATWRTPHDaADRRRG 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 317 ISTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDPsGRVTGVKAVDVK-GAPH-IFSGKNVILAAGGYGANLQMVKKYNN 394
Cdd:pfam00890 133 LGTGHALLARLLEGLRKAGVDFQPRTAADDLIVED-GRVTGAVVENRRnGREVrIRAIAAVLLATGGFGRLAELLLPAAG 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 395 isVIATSNQPGTTGEVLEAAVKAGAALEG--MQWIQIHPHG----NPKNGELESAIAGrpqdtP---YVNKLGLRFVDET 465
Cdd:pfam00890 212 --YADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSlvgiRLGSGLLIEALRG-----EggiLVNKDGRRFMNEL 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 466 GRRDEIS-----HGILEQPGQVVYSIFDqetinqkkvrddliqialshgyaykadtledlakaAGIDEKGFAQTMKAYNA 540
Cdd:pfam00890 285 ASRDVVSraitrNEIDEGRGANVYLDAS-----------------------------------GSLDAEGLEATLPAINE 329
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 541 AaaaqdtkglsvPKILIGMPVTKAPfyaVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEIT-GGIHGGNRLGR 619
Cdd:pfam00890 330 E-----------AIFGLDVDPYDRP---IPVFPAQHYTMGGVRTDENGRVLDADGQPIPGLYAAGEVAcGGVHGANRLGG 395
|
...
gi 2205811505 620 NAL 622
Cdd:pfam00890 396 NSL 398
|
|
| PRK12844 |
PRK12844 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
160-634 |
6.26e-40 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 183787 [Multi-domain] Cd Length: 557 Bit Score: 154.14 E-value: 6.26e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 160 RGAKVIVLEKMAMLGGNTARSEGNMSAmdPNPEKLLDmtqavRDIVTKYTsmkpcsKAVADLQETVKKQLAAHDAAGKK- 238
Cdd:PRK12844 28 SGLEPLIVEKQDKVGGSTAMSGGVLWL--PNNPLMKA-----AGVPDSHE------DALAYLDAVVGDQGPASSPERREa 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 239 YIFDSPELFA-LQ-----------------TIEGGDCHSD----------------PKLVLTMTQNATAAMNwlesQSDM 284
Cdd:PRK12844 95 YLRAGPAMVSfLEhqgmrfarcegwsdyypDLPGGEARGRsleakpfdarklgpwfDRLNPPMATPPGTVVM----TDEY 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 285 TW-FHVPRHW------IDVGIGGLYprgQWPRqadGKTPISTYDAYIAPLSKKVKAAGSTIYTSMKVTE-IERDpsGRVT 356
Cdd:PRK12844 171 KWlQLIKRTPrgmrtaARVGARTLA---ARIR---GQKLLTNGAALIGRMLEAALAAGVPLWTNTPLTElIVED--GRVV 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 357 GVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKYNN--ISVIATSNQPGTTGEVLEAAVKAGAALEGMQ---WIQ--I 429
Cdd:PRK12844 243 GVVVVRDGREVLIRARRGVLLASGGFGHNAEMRKRYQPqpNSGDWTNANPGDTGEVIEAAMRLGAALDLMDeawWVPgaP 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 430 HPHGNPKNGELESAIAgRPQDTpYVNKLGLRFVDETGRRDEISHGILEQPGQVVYSIFDQETINQKKVRD----DLIQIA 505
Cdd:PRK12844 323 LPNGGPRPYMHNSERS-KPGSI-IVDRAGRRFVNEAGSYMEVGRAMYAQDAVPAWMIMDSRYRKRYLFGTippgPTPQEW 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 506 LSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNA-AAAAQDT---KGLSV-----------PKILIGmPVTKAPFYAVP 570
Cdd:PRK12844 401 LDSGYMKRADTIEELAGKTGIDPAGLAATVERFNGfAATGTDPdfhRGESAydryygdptnkPNPSLG-PLDKPPFYAVR 479
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2205811505 571 LTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNA-LTDLLVFGHIAGL 634
Cdd:PRK12844 480 MVPGDVGTSGGLLTDEHARVLREDGSVIPGLYATGNCTASVMGRTYPGAGAsIGNSFVFGYIAAL 544
|
|
| COG3976 |
COG3976 |
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction ... |
28-115 |
3.73e-31 |
|
Uncharacterized conserved protein, contains FMN-binding domain [General function prediction only];
Pssm-ID: 443175 Cd Length: 116 Bit Score: 117.31 E-value: 3.73e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 28 MTPGVYSAAVPARNGELAVEVQVSADRIESVKVVRQQETPGIGSLAVEALPAAIVAQQTSSVDVVSGATMTSNAIIKAVS 107
Cdd:COG3976 29 YKDGTYTGTAQGFNGDVTVEVTVSDGKITDIEVLEHGETPGIGDKAIEELPDEIVEAQSLDVDAVSGATLTSKAIKEAVE 108
|
....*...
gi 2205811505 108 EALKQAGA 115
Cdd:COG3976 109 DALEQAGG 116
|
|
| PRK07843 |
PRK07843 |
3-oxosteroid 1-dehydrogenase; |
273-638 |
3.93e-29 |
|
3-oxosteroid 1-dehydrogenase;
Pssm-ID: 236111 [Multi-domain] Cd Length: 557 Bit Score: 122.07 E-value: 3.93e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 273 AAMNWLESQSDMTWFHV-PRHW------IDVGIgglypRGQWPRqADGKTPISTYDAYIAPLSKKVKAAGSTIYTSMKVT 345
Cdd:PRK07843 159 VPLNMVVMQQDYVWLNLlKRHPrgvlraLKVGA-----RTLWAK-ATGKNLLGMGQALAAGLRIGLQRAGVPVLLNTPLT 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 346 EIERDpSGRVTGVKAVDVkGAPHIFSGKN-VILAAGGYGANLQMVKKYNN--ISVIATSNQPGTTGEVLEAAVKAGAALE 422
Cdd:PRK07843 233 DLYVE-DGRVTGVHAAES-GEPQLIRARRgVILASGGFEHNEQMRAKYQRapIGTEWTVGAKANTGDGILAGEKLGAALD 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 423 GMQ---W---IqihphgnPKNGELESAIAGRPQ-DTPYVNKLGLRFVDETGRRDEISH-------GILEQPGQVV--YSI 486
Cdd:PRK07843 311 LMDdawWgptI-------PLPGGPWFALSERNLpGSIIVNMSGKRFMNESAPYVEAVHhmyggeyGQGPGPGENIpaWLV 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 487 FDQETINQKKVRDdlIQIA-------LSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNA-AAAAQDT---KGLSV--- 552
Cdd:PRK07843 384 FDQRYRDRYLFAG--LQPRqpipsrwLESGVIVKADTLAELAAKIGVPADALTATVQRFNGfARSGVDEdfhRGESAydr 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 553 --------PKILIGmPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNA-LT 623
Cdd:PRK07843 462 yygdptnkPNPNLG-ELSHAPFYAAKMVPGDLGTKGGLRTDVRGRVLRDDGSVIEGLYAAGNVSAPVMGHTYAGPGAtIG 540
|
410
....*....|....*
gi 2205811505 624 DLLVFGHIAGLEVTA 638
Cdd:PRK07843 541 PAMTFGYLAALDIAA 555
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
242-633 |
4.09e-27 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 116.31 E-value: 4.09e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLEsqsdmtwfhvprHWidvGIgglyprgQWPRQADGKTPISTYD 321
Cdd:PRK06069 64 DSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLD------------HW---GV-------PWSRRPDGRISQRPFG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 322 AYIAPlsKKVKAAG-------STIYTSMKVTE-IERDP----------SGRVTGVKAVDVK-GAPHIFSGKNVILAAGGY 382
Cdd:PRK06069 122 GMSFP--RTTFAADktgfyimHTLYSRALRFDnIHFYDehfvtsliveNGVFKGVTAIDLKrGEFKVFQAKAGIIATGGA 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 383 GANLQMvkkynnisviaTSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRPQDTPYVNKLGLRFV 462
Cdd:PRK06069 200 GRLYGF-----------TTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITE-AARGEGGYLINKEGERFM 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 463 D-------ETGRRDEISHGIL---------EQPGQVVYSIFDQETINQKKVRDDLIQIalshgyaykadtLEDLAKAAGI 526
Cdd:PRK06069 268 KryapqkmELAPRDVVSRAIMteimegrgfKHESGLCYVGLDLRHLGEEKINERLPLI------------REIAKKYAGI 335
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 527 DekgfaqtmkaynaaaaaqdtkglsvpkiligmPVTKApfyaVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGE 606
Cdd:PRK06069 336 D--------------------------------PVTEP----IPVRPAAHYTMGGIHTDVYGRVLTADGEWVRGLWAAGE 379
|
410 420
....*....|....*....|....*...
gi 2205811505 607 ITG-GIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PRK06069 380 AAAvSVHGANRLGSNSTAECLVWGRIAG 407
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
242-634 |
6.18e-25 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 109.30 E-value: 6.18e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESqsdmtwfhvprhWidvgiGGLYPR------------GQ-WP 308
Cdd:PRK06263 61 DSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEK------------F-----GALFDRtedgeiaqrpfgGQsFN 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 309 R---QADgktpiSTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVK-GAPHIFSGKNVILAAGGYGa 384
Cdd:PRK06263 124 RtcyAGD-----RTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLDLRnGEIFPIYAKATILATGGAG- 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 385 nlqmvkkynNISVIaTSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHG----NPKNGELESAiAGRPQDTPYVNKLGLR 460
Cdd:PRK06263 198 ---------QLYPI-TSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGmvypYSGRGILVTE-AVRGEGGILYNKNGER 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 461 FVD-------ETGRRDEISHGILEQpgqvvysIFDQETINQKKVRDDLiqialSHgyaykadtLEDlakaAGIDEKgfAQ 533
Cdd:PRK06263 267 FMKrydpermELSTRDVVARAIYTE-------IQEGRGTNHGGVYLDV-----TH--------LPD----EVIEEK--LE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 534 TM-KAYnaaaaaqdtkglsvpkILIGMPVTKAPFYAVPlttTIHHTMGGLRINEKTQvlddkgNPIPGLFAAGEITGGIH 612
Cdd:PRK06263 321 TMlEQF----------------LDVGVDIRKEPMEVAP---TAHHFMGGIRINEDCE------TNIPGLFACGEVAGGVH 375
|
410 420
....*....|....*....|..
gi 2205811505 613 GGNRLGRNALTDLLVFGHIAGL 634
Cdd:PRK06263 376 GANRLGGNALADTQVFGAIAGK 397
|
|
| PRK06134 |
PRK06134 |
putative FAD-binding dehydrogenase; Reviewed |
289-633 |
7.53e-24 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 180419 [Multi-domain] Cd Length: 581 Bit Score: 105.96 E-value: 7.53e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 289 VPRHWIDVGiggLYPRGqwprqadgkTPISTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGVKAVDVKGAPH 368
Cdd:PRK06134 197 FARHLIDLA---RHGRG---------MHLVNGNALVARLLKSAEDLGVRIWESAPARELLRE-DGRVAGAVVETPGGLQE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 369 IFSGKNVILAAGGYGANLQMVKKynnISVIATSNQ-------PGTTGEVLEAAVKAGAALegmqwiqihphgnpkNGELE 441
Cdd:PRK06134 264 IRARKGVVLAAGGFPHDPARRAA---LFPRAPTGHehlslppPGNSGDGLRLGESAGGVV---------------ATDLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 442 SAIA-----------GRPQDTPY-----------VNKLGLRFVDETGRRDEISHGILEQ--PGQVV--YSIFDQETINQK 495
Cdd:PRK06134 326 SPVAwapvslvphadGSVGHFPHiiergkpgligVLANGKRFVNEADSYHDYVAAMFAAtpPGQPVrsWLICDHRFLRRY 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 496 ---KVRDDLIQIA--LSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDT---KGLSVPKILIG-------- 558
Cdd:PRK06134 406 glgHIRPAPLPLGpyVRSGYLKRGASLEELARACGIDPDGLEATVARYNRHARNgQDPdfgRGSTPYNRKQGdpahggpn 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 559 ---MPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAG----EITGGIH--GGNRLGrnaltDLLVFG 629
Cdd:PRK06134 486 pcvAPIEHGPFYAVKVLPGCLGTFAGLKTDADARVLDQAGQPIPGLYAAGndmaSVMGGFYpsGGITLG-----PALTFG 560
|
....
gi 2205811505 630 HIAG 633
Cdd:PRK06134 561 YIAG 564
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
242-639 |
7.62e-24 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 105.57 E-value: 7.62e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESQsdmtwfHVPrhwIDVGIGGLYPRGQ-----WPR---QAD- 312
Cdd:COG0029 57 DSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIEL------GVP---FDRDEDGELALTRegghsRRRilhAGDa 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 313 -GKtpistydAYIAPLSKKVKAAGS-TIYTSMKVTEIERDPSGRVTGVKAVDVK-GAPHIFSGKNVILAAGGYGAnlqmV 389
Cdd:COG0029 128 tGR-------EIERALLEAVRAHPNiTVLENHFAVDLITDADGRCVGAYVLDEKtGEVETIRAKAVVLATGGAGQ----L 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 390 KKYnnisviaTSNQPGTTGEVLEAAVKAGAALEGMQWIQIHP----HGNPKN--------GE---LesaiagrpqdtpyV 454
Cdd:COG0029 197 YAY-------TTNPDVATGDGIAMAYRAGARLADMEFVQFHPtalyHPGAPSfliseavrGEgavL-------------R 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 455 NKLGLRF---VDETGR---RDEISHGI----LEQPGQVVYsiFDQETINQKKVRDDLIQIalshgYAYkadtledlAKAA 524
Cdd:COG0029 257 NADGERFmpdYHPRAElapRDVVARAIdaemKKTGGDCVY--LDISHLDAEFIRERFPTI-----YAR--------CLEL 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 525 GIDekgfaqtmkaynaaaaaqdtkglsvpkiligmpVTKAPfyaVPLTTTIHHTMGGLRINE--KTQvlddkgnpIPGLF 602
Cdd:COG0029 322 GID---------------------------------ITKEP---IPVAPAAHYTMGGVATDLdgRTS--------IPGLY 357
|
410 420 430
....*....|....*....|....*....|....*...
gi 2205811505 603 AAGEIT-GGIHGGNRLGRNALTDLLVFGHIAGLEVTAH 639
Cdd:COG0029 358 AVGEVAcTGVHGANRLASNSLLEGLVFGRRAAEDIAAR 395
|
|
| PRK12842 |
PRK12842 |
putative succinate dehydrogenase; Reviewed |
301-633 |
9.46e-24 |
|
putative succinate dehydrogenase; Reviewed
Pssm-ID: 237224 [Multi-domain] Cd Length: 574 Bit Score: 105.93 E-value: 9.46e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 301 LYPRGqwprqadgkTPISTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGVKAVDVKGAPHIFSGKNVILAAG 380
Cdd:PRK12842 203 LYRRG---------TQVTSGNALAARLAKSALDLGIPILTGTPARELLTE-GGRVVGARVIDAGGERRITARRGVVLACG 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 381 GYGANLQMVKK-YNNISVIATSNQP---GTTGEVLEAAVKAGAALE-----GMQWIQIH--PHGNPKNGELESAIAGRPQ 449
Cdd:PRK12842 273 GFSHDLARIARaYPHLARGGEHLSPvpaGNTGDGIRLAEAVGGAVDirfpdAAAWMPVSkvPLGGGRTGVFPHLLDRYKP 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 450 DTPYVNKLGLRFVDETGRRDEISHGILE----QPGQVVYSIFDQETINQ-----KKVRDDLIQIALSHGYAYKADTLEDL 520
Cdd:PRK12842 353 GVIGVLRNGKRFTNESNSYHDVGAAMIRacegQKETAMWLICDRATLRKyglgyAKPAPMPVGPLLRNGYLIKGDTLAEL 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 521 AKAAGIDEKGFAQTMKAYNAAAAA-QDT---KGLSVPKILIG----------MPVTKAPFYAVPLTTTIHHTMGGLRINE 586
Cdd:PRK12842 433 AGKAGIDAAGLEATVRRYNEGAVKgIDPafgRGSTSFNRYLGdpdhkpnpcvAPIGSGPFYAVKVIMGDLGTFDGLRTDV 512
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 2205811505 587 KTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRN-ALTDLLVFGHIAG 633
Cdd:PRK12842 513 TGEVLDADGTPIAGLYAVGNDRASIMGGNYPGAGiTLGPIMTFGYITG 560
|
|
| PRK12843 |
PRK12843 |
FAD-dependent oxidoreductase; |
302-632 |
1.18e-23 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237225 [Multi-domain] Cd Length: 578 Bit Score: 105.59 E-value: 1.18e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 302 YPRGqwprqadgkTPISTYDAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGVkAVDVKGAPH-IFSGKNVILAAG 380
Cdd:PRK12843 211 YARG---------TRLVMGNALIGRLLYSLRARGVRILTQTDVESLETD-HGRVIGA-TVVQGGVRRrIRARGGVVLATG 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 381 GYGANLQMVKKYNNISVIATS-NQPGTTGEVLEAAVKAGA-----ALEGMQW--IQIHPHgnpKNGELESAI-----AGR 447
Cdd:PRK12843 280 GFNRHPQLRRELLPAAVARYSpGAPGHTGAAIDLALDAGArygrgLLSNAFWapVSVRRR---ADGSTAVFPhfyldRGK 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 448 PqDTPYVNKLGLRFVDETGRRDEISHGILEQ----PGQVVYSIFDQETInqKK-----VRDDLIQIA--LSHGYAYKADT 516
Cdd:PRK12843 357 P-GTIAVNQQGRRFVNESTSYHLFGTAMFAAgktsPGIPAYLITDAEFL--RKyglgmVRPGGRGLApfLRDGYLTVAST 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 517 LEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDT---KGLSVPKILIG----------MPVTKAPFYAVPLTTTIHHTMGGL 582
Cdd:PRK12843 434 LDELAPKLGIDPAALAATVQRHNQYARTgIDPdfgRGATAYQRMNGdamigpnpnlGPIETAPFYAVRLYPGDIGAATGL 513
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 2205811505 583 RINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNA-LTDLLVFGHIA 632
Cdd:PRK12843 514 VTDASARVLNADGQPISGLYACGNDMASIMGGTYPGPGItLGPAIVFAYLA 564
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
242-639 |
1.97e-23 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 104.72 E-value: 1.97e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGD--CHSDpkLVLTMTQNATAAMNWLEsqsdmtwfhvprHWidvgigglyprG-QWPRQADGKTPIS 318
Cdd:PRK09231 60 DSFDYHFHDTVAGGDwlCEQD--VVEYFVHHCPTEMTQLE------------QW-----------GcPWSRKPDGSVNVR 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 319 TYDAYiaplskKVK----AAGSTIY--------TSMKVTEIER-DP---------SGRVTGVKAVDV-KGAPHIFSGKNV 375
Cdd:PRK09231 115 RFGGM------KIErtwfAADKTGFhmlhtlfqTSLKYPQIQRfDEhfvldilvdDGHVRGLVAMNMmEGTLVQIRANAV 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 376 ILAAGGYGanlqMVKKYNnisviatSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRPQDTPYVN 455
Cdd:PRK09231 189 VMATGGAG----RVYRYN-------TNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTE-GCRGEGGILVN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 456 KLGLRFVD------------------ETGRRDEISHGI---------LEQP-GQVVYsiFDQETINQKKVRDDLIQIAls 507
Cdd:PRK09231 257 KDGYRYLQdyglgpetplgepknkymELGPRDKVSQAFwhewrkgntISTPrGDVVY--LDLRHLGEKKLHERLPFIC-- 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 508 hgyaykadtleDLAKA-AGIDekgfaqtmkaynaaaaaqdtkglsvpkiligmPVtKAPfyaVPLTTTIHHTMGGLRINE 586
Cdd:PRK09231 333 -----------ELAKAyVGVD--------------------------------PV-KEP---IPVRPTAHYTMGGIETDQ 365
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 2205811505 587 KTQVlddkgnPIPGLFAAGEITG-GIHGGNRLGRNALTDLLVFGHIAGLEVTAH 639
Cdd:PRK09231 366 NCET------RIKGLFAVGECSSvGLHGANRLGSNSLAELVVFGRVAGEQAAER 413
|
|
| PRK12845 |
PRK12845 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
297-638 |
9.13e-22 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 237226 [Multi-domain] Cd Length: 564 Bit Score: 99.46 E-value: 9.13e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 297 GIGGLYPRGQWprQADGKtpistydAYIAPLSKKVKAAGSTIYTSMKVTEIERDpSGRVTGvkAVDVKGAPHI--FSGKN 374
Cdd:PRK12845 202 GVGGLALGRRY--AAGGQ-------ALAAGLFAGVLRAGIPIWTETSLVRLTDD-GGRVTG--AVVDHRGREVtvTARRG 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 375 VILAAGGYGANLQMVKKYNNISVI--ATSNQPGTTGEVLEAAVKAGAALEGMQ---W---IQIHPHGNPKNGELESAIAG 446
Cdd:PRK12845 270 VVLAAGGFDHDMEMRWKFQSESLGehASLGAEGNTGDAIRIAQDLGAAIGLMDqawWfpaVAPLPGGAPAVMLAERSLPG 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 447 rpqdTPYVNKLGLRFVDETgrRDEISHG--ILEQ-----PGQVVYSIFDQETIN------QKKVRDDLIQIALSHGYAYK 513
Cdd:PRK12845 350 ----SLIVDQTGRRFVNEA--TDYMSFGqrVLEReragdPVESMWIVFDQQYRNsyvfaaELFPRMPIPQAWYDAGIAHR 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 514 ADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDT---KGLSVPKILIG----------MPVTKAPFYAVPLTTTIHHTM 579
Cdd:PRK12845 424 ADSLADLARKIGVPVDTFVATMRRFNEMAAAgVDSdfgRGRSAYDRYYGdptvtpnpnlRPLDKGPFYAVKMVLSDLGTC 503
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 580 GGLRINEKTQVLDDKGNPIPGLFAAGEITGGIHGGNRLGRNA-LTDLLVFGHIAGLEVTA 638
Cdd:PRK12845 504 GGLRADERARVLREDGSVIDGLYAIGNTAANAFGATYPGAGAtIGQGLVYGYIAAQDAAA 563
|
|
| PRK12839 |
PRK12839 |
FAD-dependent oxidoreductase; |
137-636 |
1.48e-21 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 237223 [Multi-domain] Cd Length: 572 Bit Score: 98.75 E-value: 1.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 137 TQADVIIVGGGGAGMVAAATAVERGAKVIVLEKMAMLGGNTARSEG------NMSAM----------------------- 187
Cdd:PRK12839 7 HTYDVVVVGSGAGGLSAAVAAAYGGAKVLVVEKASTCGGATAWSGGwmwtpgNSLARadgvvedkeeprtylehrlgeny 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 188 -DPNPEKLLDMTQAVRDIVTKYTSMKPCSKA-VADLQETVKKQLAAHDAAGKKYIFD---SPELFAL---QTIE------ 253
Cdd:PRK12839 87 dADKVDALLDGAPEMVDFFEKKTALQFVPGAkIADIYGDLPGAGTGHRSVGPKPVNLrklGPDVAALlrhQLYEtsflgm 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 254 GGDCHSDPKLVLTMTQNATAamnwlesqsdmtWFHVPR----HWIDVGIgglYPRGQwpRQADGKtpistydAYIAPLSK 329
Cdd:PRK12839 167 GIMAGPDLQAFLHATQDPKG------------FVHAARrvivHMWDLAT---HRRGM--QLVNGT-------ALTGRLLR 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 330 KVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGANLQMVKKY-------NNISVIATSN 402
Cdd:PRK12839 223 SADDLGVDLRVSTSATSLTTDKNGRVTGVRVQGPDGAVTVEATRGVVLATGGFPNDVDRRKELfprtptgREHWTLAPAE 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 403 qpgTTGEVLEAAVKAGAALEG-----MQW--IQIHPHGNPKNGELESAI-AGRPQDTPyVNKLGLRFVDETGRRDEISHG 474
Cdd:PRK12839 303 ---TTGDGISLAESVGARLDRdlaspAAWcpVSLVPYRNGKVGTFPHIMdRGKPGSIG-VLATGKRFVNEANGYYDYTLA 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 475 ILEQ--PGQVVYS--IFDQETINQ-----KKVRDDLIQIALSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA- 544
Cdd:PRK12839 379 MVKAapEGEPVCSwlIADSRFVRKyplgmAKPLPVPLTPYLRSGYLTRGRTIEELAEKCGIDPAGLEATVAEFNENARDg 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 545 QD----------TKGLSVPKILIG---MPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAG----EI 607
Cdd:PRK12839 459 EDpefgrgttpfNRGSGDPDNGPNpslAPLEKGPFYAVKVVPGSFGTFAGLVADGKSRVLRDDDTPIDGLYAAGndqaSV 538
|
570 580 590
....*....|....*....|....*....|.
gi 2205811505 608 TGGIH--GGNRLGrNALTdllvFGHIAGLEV 636
Cdd:PRK12839 539 MGGHYpsGGINLG-PAMT----FGYIAGREL 564
|
|
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
350-636 |
4.66e-21 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 97.50 E-value: 4.66e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 350 DPSGRVTGVKAVDVK-GAPHIFSGKNVILAAGGYGANLQMvkkynnisviATSNQpGTTGEVLEAAVKAGAALEGMQWIQ 428
Cdd:PTZ00139 195 DEDGECRGVIAMSMEdGSIHRFRAHYTVIATGGYGRAYFS----------CTSAH-TCTGDGGAMVSRAGLPLQDLEFVQ 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 429 IHPHGNPKNGEL--ESAiagRPQDTPYVNKLGLRF-------VDETGRRDEISHG----ILEQPGqvvysifdqetINQK 495
Cdd:PTZ00139 264 FHPTGIYGAGCLitEGC---RGEGGILRNSEGERFmeryaptAKDLASRDVVSRAmtieILEGRG-----------CGPN 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 496 KvrdDLIQIALSHgyaYKADTLEDlaKAAGIDEKGfaqtmkaynaaaaaqdtkglsvpKILIGMPVTKAPfyaVPLTTTI 575
Cdd:PTZ00139 330 K---DHIYLDLTH---LPPETLHE--RLPGISETA-----------------------KIFAGVDVTKEP---IPVLPTV 375
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2205811505 576 HHTMGGLRINEKTQVL----DDKGNPIPGLFAAGEI-TGGIHGGNRLGRNALTDLLVFGHIAGLEV 636
Cdd:PTZ00139 376 HYNMGGIPTNWKTQVLtqrnGDDDKIVPGLLAAGEAaCASVHGANRLGANSLLDIVVFGRAAANTV 441
|
|
| PRK12837 |
PRK12837 |
FAD-binding protein; |
336-638 |
1.05e-19 |
|
FAD-binding protein;
Pssm-ID: 237222 [Multi-domain] Cd Length: 513 Bit Score: 92.97 E-value: 1.05e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 336 STIYTSMKVTEIERDpSGRVTGVkAVDVKGAP-HIFSGKNVILAAGGYGANLQMVKKYNNI-SVIATSNQPGTTGEVLEA 413
Cdd:PRK12837 189 ARLRLNTPLVELVVE-DGRVVGA-VVERGGERrRVRARRGVLLAAGGFEQNDDMRARYGVPgSARDTMGGPGNTGLAHQA 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 414 AVKAGAALEGMQ--WIQ---IHPHGnpkngelESAIAGRPQDTPYVNKLGLRFVDETGRRDEISHGILEQ--------PG 480
Cdd:PRK12837 267 AIAVGADTDLMDqaWWSpglTHPDG-------RSAFALWFTGGIFVDQHGERFVNESAPYDRLGRAVIAEmdsggmtlPF 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 481 QVVYSIFDQETINQKKVRDDLIQIA--LSHGYAYKADTLEDLAKAAGIDEKGFAQTMKAYNAAAAA-QDT---------- 547
Cdd:PRK12837 340 WMIYDDREGEVPPVKATNVSMVETAqyVAAGLWRTADTLEELAAKIGVPADALTATVARFNGFAAAgVDEdfgrgdeayd 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 548 ---KGLSVPKIligmPVTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGE----ITGGIH--GGNRLG 618
Cdd:PRK12837 420 rafSGGASPLV----PIDTPPFHAAAFGVSDLGTKGGLRTDTAARVLDTDGRPIPGLYAAGNtmaaVSGTTYpgGGNPIG 495
|
330 340
....*....|....*....|
gi 2205811505 619 RNaltdlLVFGHIAGLEVTA 638
Cdd:PRK12837 496 AS-----MLFSHLAALDMAG 510
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
350-629 |
2.22e-17 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 86.06 E-value: 2.22e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 350 DPSGRVTGVKAVDVK-GAPHIFSGKNVILAAGGYGanlqmvKKYNNisviATSNQPgTTGEVLEAAVKAGAALEGMQWIQ 428
Cdd:PLN00128 216 DSDGACQGVIALNMEdGTLHRFRAHSTILATGGYG------RAYFS----ATSAHT-CTGDGNAMVARAGLPLQDLEFVQ 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 429 IHPHGNPKNGELESAiAGRPQDTPYVNKLGLRFVD-------ETGRRDEISHGIleqpgqvVYSIFDQETINQKKvrdDL 501
Cdd:PLN00128 285 FHPTGIYGAGCLITE-GSRGEGGILRNSEGERFMEryaptakDLASRDVVSRSM-------TMEIREGRGVGPEK---DH 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 502 IQIALSHgyaYKADTLEDlaKAAGIDEKGfaqtmkaynaaaaaqdtkglsvpKILIGMPVTKAPfyaVPLTTTIHHTMGG 581
Cdd:PLN00128 354 IYLHLNH---LPPEVLKE--RLPGISETA-----------------------AIFAGVDVTKEP---IPVLPTVHYNMGG 402
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2205811505 582 LRINEKTQVLDDKGNP----IPGLFAAGEIT-GGIHGGNRLGRNALTDLLVFG 629
Cdd:PLN00128 403 IPTNYHGEVVTIKGDDpdavVPGLMAAGEAAcASVHGANRLGANSLLDIVVFG 455
|
|
| PRK12835 |
PRK12835 |
3-ketosteroid-delta-1-dehydrogenase; Reviewed |
322-638 |
1.93e-16 |
|
3-ketosteroid-delta-1-dehydrogenase; Reviewed
Pssm-ID: 237221 [Multi-domain] Cd Length: 584 Bit Score: 82.93 E-value: 1.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 322 AYIAPLSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVkAVDVKGAP-HIFSGKNVILAAGGYGANLQMVKKYnnISVIAT 400
Cdd:PRK12835 214 SLVARLRLALKDAGVPLWLDSPMTELITDPDGAVVGA-VVEREGRTlRIGARRGVILATGGFDHDMDWRKEY--LPELER 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 401 SN----QPGTTGEVLEAAVKAGAALEGMQ---WIQ--IHPHGNPKNGELESAIAgrPQDTpyVNKLGLRFVDETGRRDEI 471
Cdd:PRK12835 291 KDwsfgNPANTGDGIRAGEKVGAATDLLDeawWFPaiCWPDGRMQFMLNERMMP--AQFI--VNGAGKRFINEAAPYMDF 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 472 SHGILE-QPGQV----VYSIFDQETINQKKVRDDL----IQIA------------LSHGYAYKADTLEDLAKAAGIDEKG 530
Cdd:PRK12835 367 VHAMIAgQRSGVghipCWLVTDIRSFSRYVFGGHLpipkIPFApvptgrkfpqawLESGVVKKADTWDELAAKIGVPAEN 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 531 FAQTMKAYNA-AAAAQD---TKGLSVPKILIGMP---------VTKAPFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNP 597
Cdd:PRK12835 447 LRATAERFNGlARKGHDddfNRGDSAYDNYYGDPtlpnpnldpLGKPPYYAFRIELGDLGTSGGLRTDEHARVLREDDSV 526
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2205811505 598 IPGLFAAGEITGGIHGGNRLGRNA-LTDLLVFGHIAGLEVTA 638
Cdd:PRK12835 527 IPGLYAVGNTSASVMGRSYAGAGAtIGPAMTFGYVAARHAAA 568
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
554-634 |
2.61e-16 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 82.39 E-value: 2.61e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 554 KILIGMPVTKAPFYAVPlttTIHHTMGGLRINEKTQVLDdkgnpIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PRK07803 369 KELADVDITKEPMEVGP---TCHYVMGGVEVDPDTGAAT-----VPGLFAAGECAGGMHGSNRLGGNSLSDLLVFGRRAG 440
|
.
gi 2205811505 634 L 634
Cdd:PRK07803 441 L 441
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
343-629 |
3.51e-16 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 81.57 E-value: 3.51e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 343 KVTEIERDP-------SGRVTGVKAVDVKGAPHIFSGKNVILAAGGYGaNLQMVkkynnisviaTSNQPGTTGEVLEAAV 415
Cdd:PRK08071 143 HVTVVEQEMvidliieNGRCIGVLTKDSEGKLKRYYADYVVLASGGCG-GLYAF----------TSNDKTITGDGLAMAY 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 416 KAGAALEGMQWIQIHPHGNPKNGE---LES-AIAGRpqdtpyvnklGLRFVDETGRRdeISHGILEQ----PGQVVYSIF 487
Cdd:PRK08071 212 RAGAELVDLEFIQFHPTMLYANGRcvgLVSeAVRGE----------GAVLINEDGRR--FMMGIHPLadlaPRDVVARAI 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 488 DQETINQKKVRDDLIQIalSHgYAYKADTLEDLAKAAGIDEKgfaqtmkaynaaaaaqdTKGLSV-PkiliGMpvtkapf 566
Cdd:PRK08071 280 HEELLSGEKVYLNISSI--QN-FEERFPTISALCEKNGVDIE-----------------TKRIPVvP----GA------- 328
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2205811505 567 yavpltttiHHTMGGLRINE--KTQvlddkgnpIPGLFAAGEIT-GGIHGGNRLGRNALTDLLVFG 629
Cdd:PRK08071 329 ---------HFLMGGVKTNLdgETS--------IPGLYAIGEVAcTGVHGANRLASNSLLEGLVFG 377
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
242-636 |
1.41e-14 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 76.85 E-value: 1.41e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESqsdmtwfhvprhWidvgiGGLYPRgqwprQADGKTPISTYD 321
Cdd:PRK06452 63 DNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLER------------W-----GALFNR-----QPDGRVAVRYFG 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 322 AYIAPLSKKV--------------KAAGSTI--YTSMKVTEIERDPSgRVTGVKAVDVKG-APHIFSGKNVILAAGGYGa 384
Cdd:PRK06452 121 GQTYPRTRFVgdktgmallhtlfeRTSGLNVdfYNEWFSLDLVTDNK-KVVGIVAMQMKTlTPFFFKTKAVVLATGGMG- 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 385 nlqMVKKYNNISVIatsnqpgTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRPQDTPYVNKLGLRFVDE 464
Cdd:PRK06452 199 ---MLYRHTTNSYI-------NTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISE-AARGEGGILKNVKGERFMTK 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 465 TGrrdeiSHGILEQPGQVVYSIFDQETINQKKVRDDLIQIALSH-GYAYKADTLEDLAKAAgideKGFAqtmkaynaaaa 543
Cdd:PRK06452 268 YA-----PKKLDLAPRDIVSRAIITEIREGRGFPGGYVGLDLTHlGEEYIKERLALAVEAA----KSFA----------- 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 544 aqdtkglsvpkiliGMPVTKAPfyaVPLTTTIHHTMGGLRINektqvLDDKGNPIPGLFAAGEITG-GIHGGNRLGRNAL 622
Cdd:PRK06452 328 --------------GVDAFTEP---IPVRPAQHYYMGGIDVD-----IDGRNPDIVGLFSAGEAACvSVHGANRLGSNSL 385
|
410
....*....|....
gi 2205811505 623 TDLLVFGHIAGLEV 636
Cdd:PRK06452 386 LDTLVFGQVTGRTV 399
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
242-639 |
3.61e-13 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 72.25 E-value: 3.61e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMNWLESqsdmtwFHVPrhwidvgigglyprgqWPRQADGKTPIS--- 318
Cdd:PRK07512 62 DSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLR------LGVP----------------FDRDADGRLALGlea 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 319 --------------TYDAYIAPLSKKVKAAGS-TIYTSMKVTEIERDpSGRVTGVKAVdVKGAPHIFSGKNVILAAGGYG 383
Cdd:PRK07512 120 ahsrrrivhvggdgAGAAIMRALIAAVRATPSiTVLEGAEARRLLVD-DGAVAGVLAA-TAGGPVVLPARAVVLATGGIG 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 384 ANLQmvkkynnisviATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPhgnpkngeleSAIAGR----PQDTPYVNKLGL 459
Cdd:PRK07512 198 GLYA-----------VTTNPAGAFGQGLALAARAGAVIADPEFVQFHP----------TAIDIGrdpaPLATEALRGEGA 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 460 RFVDETGRR---DEISHGILeQPGQVVYSIFDQETINQKKVRDDLIQiALSHGYAYKADTLEDLAKAAGIDekgfaqtmk 536
Cdd:PRK07512 257 ILINEDGERfmaDIHPGAEL-APRDVVARAVFAEIAAGRGAFLDARA-ALGAHFATRFPTVYAACRSAGID--------- 325
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 537 aynaaaaaqdtkglsvpkiligmPVTKapfyAVPLTTTIHHTMGGLrinektqVLDDKG-NPIPGLFAAGEITG-GIHGG 614
Cdd:PRK07512 326 -----------------------PARQ----PIPVAPAAHYHMGGI-------AVDADGrSSLPGLWAAGEVAStGLHGA 371
|
410 420
....*....|....*....|....*
gi 2205811505 615 NRLGRNALTDLLVFGHIAGLEVTAH 639
Cdd:PRK07512 372 NRLASNSLLEAVVFAARAAEDIAGT 396
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
369-633 |
4.10e-13 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 72.07 E-value: 4.10e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 369 IFSGKNVILAAGGYGanlqmvKKYNnisviATSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAiAGRP 448
Cdd:PRK05945 183 VVRAKAVMFATGGYG------RVFN-----TTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISE-AVRG 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 449 QDTPYVNKLGLRFVD-------ETGRRDEISHGIleqpgqvvysifdqetinqkkvrddliqialshgyaykadTLEDLA 521
Cdd:PRK05945 251 EGAYLINSEGDRFMAdyapsrmELAPRDITSRAI----------------------------------------TLEIRA 290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 522 kAAGIDEKGFAQTMKAYnaaaaaQDTKGLSVPKI-------------LIGMPVTKAPfyaVPLTTTIHHTMGGLRINEKT 588
Cdd:PRK05945 291 -GRGINPDGSAGGPFVY------LDLRHMGKEKImsrvpfcweeahrLVGVDAVTEP---MPVRPTVHYCMGGIPVNTDG 360
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2205811505 589 QVLDDKGNPIPGLFAAGEITG-GIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PRK05945 361 RVRRSADGLVEGFFAAGECACvSVHGANRLGSNSLLECVVYGRRTG 406
|
|
| FMN_bind |
pfam04205 |
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as ... |
41-110 |
4.19e-13 |
|
FMN-binding domain; This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins. This domain is post-translationally flavinylated that may facilitate electron transfer, and thus, resembles multiheme cytochromes.
Pssm-ID: 461226 [Multi-domain] Cd Length: 71 Bit Score: 64.55 E-value: 4.19e-13
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2205811505 41 NGELAVEVQVSAD-RIESVKVVRQQETPGIGSLAVEALPAAIVAQQtsSVDVVSGATMTSNAIIKAVSEAL 110
Cdd:pfam04205 3 GGPITVLVGVDGDgTITGIKVLEHSETPGLGIKEQKVKKDKIEGGQ--DVDAISGATITSRAVVEAVKNAL 71
|
|
| FMN_bind |
smart00900 |
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR ... |
43-110 |
7.82e-13 |
|
This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins;
Pssm-ID: 214897 [Multi-domain] Cd Length: 86 Bit Score: 64.29 E-value: 7.82e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 43 ELAVEVQVSADRIESVKVVRQQETPG-----------IGSLAVEALPAAIVAQQTS-SVDVVSGATMTSNAIIKAVSEAL 110
Cdd:smart00900 7 TVLVTVKDDKGKITGVKVLEHKETPGdgidepkwigqFAGKALEKLAKEIVKKQSGgDVDAISGATITSRAVKDAVKRAL 86
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
368-636 |
7.32e-12 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 67.79 E-value: 7.32e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 368 HIFSgKNVILAAGGYGAnlqmvkKYNNisviaTSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAI--- 444
Cdd:PRK06175 175 NIYS-KVTILATGGIGG------LFKN-----STNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIEGKKFlis 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 445 -AGRPQDTPYVNKLGLRFVDETGRRDEISHGILEQpgqvvysifdqetinQKKVRDDLIQIALSHgyaYKADTLEDlaKA 523
Cdd:PRK06175 243 eSVRGEGGKLLNSKGERFVDELLPRDVVTKAILEE---------------MKKTGSNYVYLDITF---LDKDFLKN--RF 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 524 AGIdekgFAQTMKaynaaaaaqdtKGLSVPKILIgmPVTKAPfyavpltttiHHTMGGLR--INEKTQvlddkgnpIPGL 601
Cdd:PRK06175 303 PTI----YEECLK-----------RGIDITKDAI--PVSPAQ----------HYFMGGIKvdLNSKTS--------MKNL 347
|
250 260 270
....*....|....*....|....*....|....*.
gi 2205811505 602 FAAGEIT-GGIHGGNRLGRNALTDLLVFGHIAGLEV 636
Cdd:PRK06175 348 YAFGEVScTGVHGANRLASNSLLEGLVFSKRGAEKI 383
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
348-628 |
1.16e-09 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 61.27 E-value: 1.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 348 ERDPSGRVTGVKAVDVK-GAPHIFSGKNVILAAGGYGanlqmvKKYNNisviaTSNQPGTTGEVLEAAVKAGAALEGMQW 426
Cdd:PLN02815 186 QDGGSIVCHGADVLDTRtGEVVRFISKVTLLASGGAG------HIYPS-----TTNPLVATGDGIAMAHRAQAVVSNMEF 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 427 IQIHPHG--------NPKNGElESAI----AGRPQDTPYVNKLGLRFVDETGRRDEIShgileqPGQVV-YSIFDQetin 493
Cdd:PLN02815 255 VQFHPTAladeglpiKPAKAR-ENAFliteAVRGDGGILYNLAGERFMPLYDERAELA------PRDVVaRSIDDQ---- 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 494 QKKVRDDLIQIALSHGYAYKAdtledLAKAAGIDekgfAQTMKaynaaaaaqdtkglsvpkilIGMPVTKAPFYAVPLTt 573
Cdd:PLN02815 324 LKKRNEKYVLLDISHKPREEI-----LSHFPNIA----AECLK--------------------RGLDITKQPIPVVPAA- 373
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2205811505 574 tiHHTMGGLRINEKTQVlddkgnPIPGLFAAGEIT-GGIHGGNRLGRNALTDLLVF 628
Cdd:PLN02815 374 --HYMCGGVRTGLQGET------NVQGLYAAGEVAcTGLHGANRLASNSLLEALVF 421
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
331-639 |
2.76e-09 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 59.98 E-value: 2.76e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 331 VKAAGSTIYTSMKVTEIERDPSGRVTGVKA-VDVKGAPH---IFSGKNVILAAGGYGanlQMVKkynnisviATSNQPGT 406
Cdd:PRK07804 154 VRADPLDIREHALALDLLTDGTGAVAGVTLhVLGEGSPDgvgAVHAPAVVLATGGLG---QLYA--------ATTNPAGS 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 407 TGEVLEAAVKAGAALEGMQWIQIHPH----GNPKNGElesaiagRPQDTPYVNKLGLRFVDETGR--------------R 468
Cdd:PRK07804 223 TGDGVALALRAGAAVSDLEFVQFHPTvlflGPAAGGQ-------RPLISEAVRGEGAILVDAQGNrfmagvhpladlapR 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 469 DEISHGILEQpgqvvysifdqetinQKKVRDDliqialsHGY--AYKADTLED-----LA--KAAGIDekgfaqtmkayn 539
Cdd:PRK07804 296 DVVAKAIDRR---------------MKATGDD-------HVYldARGIEGFARrfptiTAscRAAGID------------ 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 540 aaaaaqdtkglsvpkiligmPVTKApfyaVPLTTTIHHTMGGLRInektqvlDDKGNP-IPGLFAAGEITG-GIHGGNRL 617
Cdd:PRK07804 342 --------------------PVRQP----IPVAPAAHYSCGGVVT-------DVYGRTsVPGLYAAGEVACtGVHGANRL 390
|
330 340
....*....|....*....|..
gi 2205811505 618 GRNALTDLLVFGHIAGLEVTAH 639
Cdd:PRK07804 391 ASNSLLEGLVVGERAGAAAAAH 412
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
351-639 |
1.08e-08 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 58.00 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 351 PSGRVTGVKAVDV-KGAPHIFSGKNVILAAGGYGanlqmvKKYnnisvIATSNQPGTTGEVLEAAVKAGAALEGMQWIQI 429
Cdd:PRK09077 174 PGRRVVGAYVLNRnKERVETIRAKFVVLATGGAS------KVY-----LYTTNPDIASGDGIAMAWRAGCRVANMEFNQF 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 430 HP----HGNPKNGELESAIAG------RPQdtpyvnklGLRFVDETGRRDEIShgileqPGQVVYSIFDQEtinQKKVRD 499
Cdd:PRK09077 243 HPtclyHPQARSFLITEALRGegaylkLPD--------GTRFMPDFDERAELA------PRDIVARAIDHE---MKRLGA 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 500 DLIQIALSHgyaykadtledlaKAAGIDEKGFaqtmkaynaaaaaqdtkglsvPKIL-----IGMPVTKAPFYAVPlttT 574
Cdd:PRK09077 306 DCVYLDISH-------------KPADFIRQHF---------------------PTIYercleLGIDITKEPIPVVP---A 348
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2205811505 575 IHHTMGGLrinektqVLDDKGNP-IPGLFAAGEIT-GGIHGGNRLGRNALTDLLVFGHIAGLEVTAH 639
Cdd:PRK09077 349 AHYTCGGV-------MVDLHGRTdLDGLYAIGEVSyTGLHGANRMASNSLLECLVYGRSAAEDILSR 408
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
375-636 |
2.01e-08 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 57.12 E-value: 2.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 375 VILAAGGYGAnlqmVKKYnnisviaTSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGN-PKNGELESAIAGRPQDTPY 453
Cdd:PRK08401 167 TVIATGGFSG----LFKF-------TAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGFiGKRGTYLISEAVRGAGAKL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 454 VNKLGLRFVDETGRRDEISHGILE--QPGQVVYsiFDQETINQKKVRDDLIqialshgYAYkadtledlAKAAGIDEKgf 531
Cdd:PRK08401 236 VTGDGERFVNELETRDIVARAIYRkmQEGKGVF--LDATGIEDFKRRFPQI-------YAF--------LRKEGIDPS-- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 532 aqtmkaynaaaaaqdtkglsvpKILIgmpvtkapfyavPLTTTIHHTMGGLRINEKTQvlddkgNPIPGLFAAGE-ITGG 610
Cdd:PRK08401 297 ----------------------RDLI------------PVTPIAHYTIGGISVDTFYR------TGIKNLYAIGEaASNG 336
|
250 260
....*....|....*....|....*.
gi 2205811505 611 IHGGNRLGRNALTDLLVfghiAGLEV 636
Cdd:PRK08401 337 FHGANRLASNSLLECIV----SGLEV 358
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
242-641 |
2.64e-08 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 56.98 E-value: 2.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 242 DSPELFALQTIEGGDCHSDPKLVLTMTQNATAAMnwlesqsdmtwfhvpRHWIDVGIGgLYPRGQ-----------WPR- 309
Cdd:PRK07395 62 DSPKLHYEDTLKAGAGLCDPEAVRFLVEQAPEAI---------------ASLVEMGVA-FDRHGQhlaltleaahsRPRv 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 310 --QAD--GKTPISTydayiapLSKKVKAAGS-TIYTSMKVTEIERDP-SGRVTGVkAVDVKGAPHIFSGKNVILAAGGYG 383
Cdd:PRK07395 126 lhAADttGRAIVTT-------LTEQVLQRPNiEIISQALALSLWLEPeTGRCQGI-SLLYQGQITWLRAGAVILATGGGG 197
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 384 anlqmvkkynniSVIA-TSNQPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGelesaiAGRPQDTPYVNKLGLRFV 462
Cdd:PRK07395 198 ------------QVFAqTTNPAVSTGDGVALAWRAGAQLRDLEFFQFHPTALTKPG------APRFLISEAVRGEGAHLV 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 463 DETGRR---DEISHGILeQPGQVV-YSIFD--QET---INQKKVRDDLIQIAlshgyaykADTLEDlakaagidekgfaq 533
Cdd:PRK07395 260 DAQGRRfafDYHPAGEL-APRDVVsRAIFShlQKTatdPATAHVWLDLRPIP--------AERIRR-------------- 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 534 tmkaynaaaaaqdtkglSVPKIL-----IGMPVTKAPfyaVPLTTTIHHTMGGLRINektqvLDDKGNpIPGLFAAGEIT 608
Cdd:PRK07395 317 -----------------RFPNIIrvcqkWGIDVFQEP---IPVAPAAHYWMGGVVTD-----LNNQTS-IPGLYAVGETA 370
|
410 420 430
....*....|....*....|....*....|....*
gi 2205811505 609 G-GIHGGNRLGRNALTDLLVFGH-IAGLEVTAHQN 641
Cdd:PRK07395 371 StGVHGANRLASNSLLECLVFAAqLAQLELPIEPP 405
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
350-633 |
4.61e-08 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 56.13 E-value: 4.61e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 350 DPSGRVTGVKAVDVKGAP-HIFSGKNVILAAGGYGAnlqMVKKYNNiSVIatsnqpgTTGEVLEAAVKAGAALEGMQWIQ 428
Cdd:PRK08641 166 DDEGVCRGIVAQDLFTMEiESFPADAVIMATGGPGI---IFGKSTN-STI-------NTGSAASRVYQQGAYYANGEFIQ 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 429 IHPhgnpkngeleSAIAGRPQdtpyvnklgLRFVDETGR---------RDEISHGILEQ--P--GQVV------YSIFDQ 489
Cdd:PRK08641 235 IHP----------TAIPGDDK---------LRLMSESARgeggrvwtyKDGKPWYFLEEkyPayGNLVprdiatREIFDV 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 490 eTINQKKVRD--DLIQIALSHGYAYKADT-----LEDLAKAAGIDEKgfaqtmkaynaaaaaqdtkglSVP-KIligmpv 561
Cdd:PRK08641 296 -CVEQKLGINgeNMVYLDLSHKDPKELDIklggiLEIYEKFTGDDPR---------------------KVPmKI------ 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2205811505 562 tkapFYAVpltttiHHTMGGLRINektqvlDDKGNPIPGLFAAGEITGGIHGGNRLGRNALTDLLVFGHIAG 633
Cdd:PRK08641 348 ----FPAV------HYSMGGLWVD------YDQMTNIPGLFAAGECDYSYHGANRLGANSLLSAIYGGMVAG 403
|
|
| COG3573 |
COG3573 |
Predicted oxidoreductase [General function prediction only]; |
324-622 |
7.08e-08 |
|
Predicted oxidoreductase [General function prediction only];
Pssm-ID: 442794 [Multi-domain] Cd Length: 551 Bit Score: 55.57 E-value: 7.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 324 IAPLSKKVKAAGS----TIYTSMKVTEIERDpSGRVTGVKAV---------------DVKGAPHiFSGKNVILAAGGYGA 384
Cdd:COG3573 152 VEPFIRRVRAAAAagrvTFRFRHRVDELIVE-DGAVTGVRGEvlapsdaergaassrDVVGEFE-LRAQAVIVASGGIGG 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 385 NLQMVKKynnisviatsNQP---GTT-------------GEVLEAAVKAGAAL--EGMQWiqiH-----PHGNPKngele 441
Cdd:COG3573 230 NHELVRR----------NWParlGPPpktmlsgvpahvdGRMLDIAEAAGARLinRDRMW---HytegiPNWDPI----- 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 442 saiagRPQDtpyvnklGLRFV--------DETGRR---------DeiSHG----ILEQPGQvvYS-------IFDQE--- 490
Cdd:COG3573 292 -----WPGH-------GIRILpgpsslwlDATGRRlpaplfpgfD--TLGtlehIRATGYD--YSwfvlnqkIIEKEfal 355
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 491 -------TINQKKVR----------DDLIQIALSHGYAY-KADTLEDLAKA-------AGIDEKGFAQTMKAYNAAAAAQ 545
Cdd:COG3573 356 sgseqnpDLTGKDLRlvlkrllkgaPGPVEAFKDHGEDFvVADTLEELVAGmnaltgePLLDAATLRRQIEARDRQIDNP 435
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 546 DTKGLSVPKIL-----IG---MPVTK---------APFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEIT 608
Cdd:COG3573 436 FSKDAQIRAIRnarryRGdrlIRTAKphrlldpkaGPLIAVRLNILTRKTLGGLQTDLDSRVLDADGQPIPGLYAAGEAA 515
|
410
....*....|....*
gi 2205811505 609 G-GihGGNRLGRNAL 622
Cdd:COG3573 516 GfG--GGGVHGYRAL 528
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
565-617 |
1.14e-06 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 51.44 E-value: 1.14e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2205811505 565 PFYAVPLTTTIHHTMGGLRINEKTQVLDDKGNPIPGLFAAGEIT----GGIHGGNRL 617
Cdd:PRK12834 471 PLIAVRLHILTRKTLGGLETDLDSRVLGADGTPLPGLYAAGEAAgfggGGVHGYNAL 527
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
567-622 |
3.16e-06 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 50.20 E-value: 3.16e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 567 YAVPLTT--TIHHTMGGLRI--NEKTQvlddkgnpIPGLFAAGEITGGIHGGNRLGRNAL 622
Cdd:PRK07573 392 YETPMRIypAVHYTMGGLWVdyNLMST--------IPGLFVIGEANFSDHGANRLGASAL 443
|
|
| rnfG |
TIGR01947 |
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in ... |
32-122 |
3.18e-05 |
|
electron transport complex, RnfABCDGE type, G subunit; The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the A subunit. [Energy metabolism, Electron transport]
Pssm-ID: 273889 [Multi-domain] Cd Length: 186 Bit Score: 45.04 E-value: 3.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 32 VYSAAVPARNGELAVEVQVSAD-RIESVKVVRQQETPGIG-----------------SLAVEALPAAIVAQQTSSVDVVS 93
Cdd:TIGR01947 85 VLEVSAPGYSGPIQLLVGIDKDgTILGVRVLSHKETPGLGdkielrisdwiegfagkSLADPDDDHWAVKKDGGQFDQFT 164
|
90 100
....*....|....*....|....*....
gi 2205811505 94 GATMTSNAIIKAVSEALkqagadaSFFKK 122
Cdd:TIGR01947 165 GATITPRAVVNAVKRAL-------RYFKE 186
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
569-639 |
5.09e-05 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 46.51 E-value: 5.09e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2205811505 569 VPLTTTIHHTMGGLRINEKTQVLDDKGnpipgLFAAGEIT-GGIHGGNRLGRNALTDLLVFGHIAGLEVTAH 639
Cdd:PRK08626 362 IPVRPTQHYSMGGIRTNPTGESYGLKG-----LFSAGEAAcWDMHGFNRLGGNSLAETVVAGMIVGKYVADF 428
|
|
| RnfG |
COG4659 |
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit [Energy production and ... |
50-111 |
7.47e-05 |
|
Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit [Energy production and conversion]; Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfG subunit is part of the Pathway/BioSystem: Na+-translocating Fd:NADH oxidoreductase
Pssm-ID: 443697 [Multi-domain] Cd Length: 192 Bit Score: 44.05 E-value: 7.47e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2205811505 50 VSAD-RIESVKVVRQQETPGIGS--------------LAVEALPAAI-VAQQTSSVDVVSGATMTSNAIIKAVSEALK 111
Cdd:COG4659 108 IDPDgTILGVRVLSHKETPGLGDkieersdwilqfkgKSLDNPDARWaVKKDGGEFDAITGATITSRAVVKAVNRALE 185
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
327-462 |
7.89e-05 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 45.81 E-value: 7.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 327 LSKKVKAAGSTIYTSMKVTEIERDPSGRVTGVKAVDVKGAP-HIFSGKNVILAAGGYG-----ANLQMVKKYNNisviat 400
Cdd:PRK08275 143 LYRQLKRARVLITNRIMATRLLTDADGRVAGALGFDCRTGEfLVIRAKAVILCCGAAGrlglpASGYLFGTYEN------ 216
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2205811505 401 snqPGTTGEVLEAAVKAGAALEGMQWIQIHPHGNPKNGELESAIAGrPQDTPYVNKLGLRFV 462
Cdd:PRK08275 217 ---PTNAGDGYAMAYHAGAELANLECFQINPLIKDYNGPACAYVTG-PLGGYTANAKGERFI 274
|
|
| Tpp15 |
COG4939 |
Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown]; |
73-113 |
3.01e-04 |
|
Membrane-anchored lipoprotein Tpp15, major membrane immunogen [Function unknown];
Pssm-ID: 443966 Cd Length: 115 Bit Score: 40.69 E-value: 3.01e-04
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 2205811505 73 AVEALPAAIV-AQQTSSVDVVSGATMTSNAIIKAVSEALKQA 113
Cdd:COG4939 73 AAPALAKYLVeKQDPEKVDVVSGATVSSKQFKELAEKALNAA 114
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
159-386 |
6.51e-03 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 39.12 E-value: 6.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 159 ERGAKVIVLEKMAMLGGNTARSEGNMSAMDPNP--EKLLDMTQAVRDIVtkytsmkpcskavadlqetvkKQLAAHdaag 236
Cdd:COG0665 23 RRGLDVTVLERGRPGSGASGRNAGQLRPGLAALadRALVRLAREALDLW---------------------RELAAE---- 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 237 kkyifdspelfalqtiEGGDCHSDPKLVLTMTQNATAAMNWLESQSDMTWFHVPRHWIDVG--------------IGGLY 302
Cdd:COG0665 78 ----------------LGIDCDFRRTGVLYLARTEAELAALRAEAEALRALGLPVELLDAAelrerepglgspdyAGGLY 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2205811505 303 prgqWPRQADGKTPistydAYIAPLSKKVKAAGSTIYTSMKVTEIERDPsGRVTGVKAVDvkgapHIFSGKNVILAAGGY 382
Cdd:COG0665 142 ----DPDDGHVDPA-----KLVRALARAARAAGVRIREGTPVTGLEREG-GRVTGVRTER-----GTVRADAVVLAAGAW 206
|
....
gi 2205811505 383 GANL 386
Cdd:COG0665 207 SARL 210
|
|
| |
