|
Name |
Accession |
Description |
Interval |
E-value |
| MetP |
COG2011 |
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
1-218 |
6.98e-94 |
|
ABC-type methionine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 441614 Cd Length: 220 Bit Score: 273.47 E-value: 6.98e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 1 MSWEDLWPLLLDGTLDTLYMVGLAALFTVLIGLPTGVLLFISRANGLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFT 80
Cdd:COG2011 3 TMWSELWPLLLQATGETLYMVGVSTLIAVLLGLPLGVLLVLTRPGGLLPNPVLYRVLGVIVNIFRSIPFIILLVALIPLT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 81 RLIVGTTLGSTAAIVPVTIGAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG 160
Cdd:COG2011 83 RLIVGTSIGTTAAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTVTLISLIG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2255892139 161 FSSMAGVIGGGGLGDLAIRYGYQRFNNEVMFGTVLILVAMVQGVQMAGDRLVRSLAHR 218
Cdd:COG2011 163 YSAMAGAVGGGGLGDLAIRYGYQRFDTDVMLVTVVILIVLVQIIQFLGDRLARRLDHR 220
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
20-218 |
8.85e-51 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 164.14 E-value: 8.85e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 20 MVGLAALFTVLIGLPTGVLLFISRANGLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPVTI 99
Cdd:PRK10782 19 MTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTLSALVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 100 GAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDLAIR 179
Cdd:PRK10782 99 GAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQ 178
|
170 180 190
....*....|....*....|....*....|....*....
gi 2255892139 180 YGYQRFNNEVMFGTVLILVAMVQGVQMAGDRLVRSLAHR 218
Cdd:PRK10782 179 YGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTHK 217
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
20-149 |
4.60e-09 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 54.86 E-value: 4.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 20 MVGLAALFTVLIGLPTGVLlfisRANGLAPMPKLNALLGAVINIGRSLPfiVLLIALIpftrLIVGTTLGSTAAIVPVTI 99
Cdd:TIGR01097 66 MAILGTVLAAVLAVPLALL----AARNITPSPWLYGLARLLLNFLRAIP--ELVWALI----FVAAVGLGPFAGVLALAF 135
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2255892139 100 GAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLA 149
Cdd:TIGR01097 136 HTVGFLGKLFAEAIEEVDPGPVEALRATGASKLQVIRYGVLPQVLPQFLS 185
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
46-218 |
3.89e-08 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 51.15 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 46 GLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFTrLIVGTTLGSTAAIVPVTIGAFPFFARSTENALDEVDYGRIEAIL 125
Cdd:pfam00528 9 ALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAAR 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 126 SMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDLAIRYGYQRFNNEVMFGTVLILVAMVQGVQ 205
Cdd:pfam00528 88 ALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLN 167
|
170
....*....|...
gi 2255892139 206 MAGDRLVRSLAHR 218
Cdd:pfam00528 168 LLVDILQRLLDPR 180
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
19-201 |
4.79e-08 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 51.13 E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 19 YMVGLAALFTVLIGLPTGVLLFISRanglapmPKLNALLGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPVT 98
Cdd:cd06261 6 LLALIATLLALVLGLLLGIILARKR-------GKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGLPALI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 99 IGAF---PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG---FSSMAGVIGGGG 172
Cdd:cd06261 79 LALLliaPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGefaLVSFLGGGEAPG 158
|
170 180
....*....|....*....|....*....
gi 2255892139 173 LGDLAIRYGYQRFNNEVMFGTVLILVAMV 201
Cdd:cd06261 159 PGTGLLLIFAILFPGDLGVAAAVALILLL 187
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MetP |
COG2011 |
ABC-type methionine transport system, permease component [Amino acid transport and metabolism]; ... |
1-218 |
6.98e-94 |
|
ABC-type methionine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 441614 Cd Length: 220 Bit Score: 273.47 E-value: 6.98e-94
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 1 MSWEDLWPLLLDGTLDTLYMVGLAALFTVLIGLPTGVLLFISRANGLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFT 80
Cdd:COG2011 3 TMWSELWPLLLQATGETLYMVGVSTLIAVLLGLPLGVLLVLTRPGGLLPNPVLYRVLGVIVNIFRSIPFIILLVALIPLT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 81 RLIVGTTLGSTAAIVPVTIGAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG 160
Cdd:COG2011 83 RLIVGTSIGTTAAIVPLTIAAIPFFARLVENALREVDPGVIEAAQAMGASPWQIIFKVLLPEALPSLILGLTVTLISLIG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2255892139 161 FSSMAGVIGGGGLGDLAIRYGYQRFNNEVMFGTVLILVAMVQGVQMAGDRLVRSLAHR 218
Cdd:COG2011 163 YSAMAGAVGGGGLGDLAIRYGYQRFDTDVMLVTVVILIVLVQIIQFLGDRLARRLDHR 220
|
|
| PRK10782 |
PRK10782 |
D-methionine ABC transporter permease MetI; |
20-218 |
8.85e-51 |
|
D-methionine ABC transporter permease MetI;
Pssm-ID: 182726 Cd Length: 217 Bit Score: 164.14 E-value: 8.85e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 20 MVGLAALFTVLIGLPTGVLLFISRANGLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPVTI 99
Cdd:PRK10782 19 MTFVSGFFGFVIGLPVGVLLYVTRPGQIIANAKLYRTLSALVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTV 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 100 GAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDLAIR 179
Cdd:PRK10782 99 GAAPFIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQ 178
|
170 180 190
....*....|....*....|....*....|....*....
gi 2255892139 180 YGYQRFNNEVMFGTVLILVAMVQGVQMAGDRLVRSLAHR 218
Cdd:PRK10782 179 YGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTHK 217
|
|
| OpuBB |
COG1174 |
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport ... |
19-198 |
5.18e-10 |
|
ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440787 [Multi-domain] Cd Length: 212 Bit Score: 56.99 E-value: 5.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 19 YMVGLAALFTVLIGLPTGVLlfISRAnglapmPKLNALLGAVINIGRSLPFIVLLIALIPFTrlivgtTLGSTAAIVPVT 98
Cdd:COG1174 25 LLVLLALLIALLIAVPLGIL--ITRR------RRLAGLVLGVANILQTIPSLALLALLIPLL------GIGPAPAIIALV 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 99 IGAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDLAI 178
Cdd:COG1174 91 LYALLPILRNTYTGLRSVDPAVVEAARGMGMTPWQRLWRVELPLALPVILAGIRTAAVQNIGTATLAALIGAGGLGDLIF 170
|
170 180
....*....|....*....|.
gi 2255892139 179 RyGYQRFN-NEVMFGTVLILV 198
Cdd:COG1174 171 D-GLQLNNtALILAGAILVAL 190
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
20-149 |
4.60e-09 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 54.86 E-value: 4.60e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 20 MVGLAALFTVLIGLPTGVLlfisRANGLAPMPKLNALLGAVINIGRSLPfiVLLIALIpftrLIVGTTLGSTAAIVPVTI 99
Cdd:TIGR01097 66 MAILGTVLAAVLAVPLALL----AARNITPSPWLYGLARLLLNFLRAIP--ELVWALI----FVAAVGLGPFAGVLALAF 135
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2255892139 100 GAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLA 149
Cdd:TIGR01097 136 HTVGFLGKLFAEAIEEVDPGPVEALRATGASKLQVIRYGVLPQVLPQFLS 185
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
21-157 |
8.06e-09 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 54.00 E-value: 8.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 21 VGLAALFTVLIGLPTGVLLFISRAnglapmpkLNALLGAVINIGRSLPfivlLIALIPFTRLIVGttLGSTAAIVPVTIG 100
Cdd:COG0600 70 VLLGFALAALLGVPLGLLLGLSRL--------LRRLLDPLLVFLRPIP----PLALAPLLILWFG--IGEASKIFVIFLG 135
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*..
gi 2255892139 101 AFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVM 157
Cdd:COG0600 136 AFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGL 192
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
46-218 |
3.89e-08 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 51.15 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 46 GLAPMPKLNALLGAVINIGRSLPFIVLLIALIPFTrLIVGTTLGSTAAIVPVTIGAFPFFARSTENALDEVDYGRIEAIL 125
Cdd:pfam00528 9 ALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIA-ILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAAR 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 126 SMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMAGVIGGGGLGDLAIRYGYQRFNNEVMFGTVLILVAMVQGVQ 205
Cdd:pfam00528 88 ALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLGSWPGLGLLLIEAILGYDYPEIQGPVLAAALILLLLN 167
|
170
....*....|...
gi 2255892139 206 MAGDRLVRSLAHR 218
Cdd:pfam00528 168 LLVDILQRLLDPR 180
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
19-201 |
4.79e-08 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 51.13 E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 19 YMVGLAALFTVLIGLPTGVLLFISRanglapmPKLNALLGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPVT 98
Cdd:cd06261 6 LLALIATLLALVLGLLLGIILARKR-------GKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGLGLPALI 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 99 IGAF---PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG---FSSMAGVIGGGG 172
Cdd:cd06261 79 LALLliaPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGefaLVSFLGGGEAPG 158
|
170 180
....*....|....*....|....*....
gi 2255892139 173 LGDLAIRYGYQRFNNEVMFGTVLILVAMV 201
Cdd:cd06261 159 PGTGLLLIFAILFPGDLGVAAAVALILLL 187
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
23-149 |
6.66e-08 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 51.23 E-value: 6.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 23 LAALFTVLIGLPTGVLlfisRANGLAPMPKLNALLGAVINIGRSLPfiVLLIALIpftrLIVGTTLGSTAAIVPVTIGAF 102
Cdd:COG3639 62 LGTLLGAVLALPLAFL----AARNLAPNPWVRLLARRLLNVLRAIP--ELVWALI----FVAAVGLGPFAGVLALAIHTI 131
|
90 100 110 120
....*....|....*....|....*....|....*....|....*..
gi 2255892139 103 PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLA 149
Cdd:COG3639 132 GFLGKLFAEAIEEIDPGPVEALRATGASRLQVIRYGVLPQVLPQFLS 178
|
|
| PRK10952 |
PRK10952 |
proline/glycine betaine ABC transporter permease ProW; |
24-157 |
1.22e-04 |
|
proline/glycine betaine ABC transporter permease ProW;
Pssm-ID: 236805 Cd Length: 355 Bit Score: 42.00 E-value: 1.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 24 AALFTVLIGLPTGVLLFISRANGLAPMPKLNALlgavinigRSLPFIVLLIALIpftrLIVGttLGSTAAIVPVTIGAFP 103
Cdd:PRK10952 156 ALLFCIVIGLPLGIWLARSPRAAKIIRPLLDAM--------QTTPAFVYLVPIV----MLFG--IGNVPGVVVTIIFALP 221
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 2255892139 104 FFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVM 157
Cdd:PRK10952 222 PIVRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLML 275
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
22-160 |
1.44e-04 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 42.07 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 22 GLAALFTVLIGLPTGVLLFISRAnglapmpKLNALLGAVINIGRSLPFIVLLIALIPFTRLIVGTTLGSTAAIVPV--TI 99
Cdd:COG1178 348 LLAALLAVLLALLLAYLVRRRRG-------RLARLLDRLAMLPYAVPGIVLGLGLLLLFNRPLPLLLYGTLAILVLayVV 420
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2255892139 100 GAFPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG 160
Cdd:COG1178 421 RFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMK 481
|
|
| PRK10160 |
PRK10160 |
taurine ABC transporter permease TauC; |
23-151 |
2.18e-04 |
|
taurine ABC transporter permease TauC;
Pssm-ID: 182276 Cd Length: 275 Bit Score: 41.31 E-value: 2.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 23 LAALFTVLIGLPTGVLLFISranglapmPKLNALLGAVINIGRSLPfivlLIALIPFTRLIVGttLGSTAAIVPVTIGAF 102
Cdd:PRK10160 89 LALLAAVVIGIPVGIAMGLS--------PTVRGILDPLIELYRPVP----PLAYLPLMVIWFG--IGETSKILLIYLAIF 154
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 2255892139 103 PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGI 151
Cdd:PRK10160 155 APVAMSALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGL 203
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
103-157 |
3.10e-04 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 40.76 E-value: 3.10e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 2255892139 103 PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVM 157
Cdd:PRK15050 174 PFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLL 228
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
23-160 |
5.52e-04 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 39.71 E-value: 5.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 23 LAALFTVLIGLPTGVLLFISRanglapmPKLNALLGAVINIGRSLPFIVLLIALIPFTRLIvGTTLGSTAAIVPVTIGAF 102
Cdd:COG1177 72 LSTLLATVLGTPAALALARYR-------FRGRRLLLALLLLPLVVPGIVLGVALLLLFSAL-GLSGGLWGLILAHVVFTL 143
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2255892139 103 PFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIG 160
Cdd:COG1177 144 PFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFD 201
|
|
| HisM |
COG0765 |
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ... |
23-165 |
6.58e-04 |
|
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];
Pssm-ID: 440528 [Multi-domain] Cd Length: 218 Bit Score: 39.29 E-value: 6.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 23 LAALFTVLIGLPTGVLLFISRangLAPMPKLNALLGAVINIGRSLPFIVLLIaLIPFTRLIVGTTLGS-TAAIVPVTIGA 101
Cdd:COG0765 24 LLTVLAIVLGLVLGLLLALAR---LSPNPVLRWLATAYVEFFRGTPLLVQLF-FIYFGLPLLGIDLSPfVAAVIALTLNS 99
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2255892139 102 FPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLPEALPTLLAGITLTIVMLIGFSSMA 165
Cdd:COG0765 100 AAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILPQALRIILPPLGNEFISLLKDTSLV 163
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
1-160 |
3.72e-03 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 37.43 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 1 MSWEDLWPLLLDGTLDTLYMV-----GLAALFTVLIGLPTGVLLFISRANGlapmpklNALLGAVINIGRSLPFIV--LL 73
Cdd:PRK10971 42 MSWAQYWEVITNPQVVAAYKVtllsaFVASIFNAVFGLLMAWILTRYRFPG-------RTLLDALMDLPFALPTAVagLT 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255892139 74 IA------------LIPFTRLIVGTTLGSTAAIVPVTIgafPFFARSTENALDEVDYGRIEAILSMGGNVWHVIFKSLLP 141
Cdd:PRK10971 115 LAslfsvngwygewLAKFDIKVTYTWLGIAVAMAFTSI---PFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLP 191
|
170
....*....|....*....
gi 2255892139 142 EALPTLLAGITLTIVMLIG 160
Cdd:PRK10971 192 ELSPALLAGVALSFTRSLG 210
|
|
| |
