|
Name |
Accession |
Description |
Interval |
E-value |
| AcrB |
COG0841 |
Multidrug efflux pump subunit AcrB [Defense mechanisms]; |
1-1259 |
0e+00 |
|
Multidrug efflux pump subunit AcrB [Defense mechanisms];
Pssm-ID: 440603 [Multi-domain] Cd Length: 1015 Bit Score: 947.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1 MKITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEM 80
Cdd:COG0841 1 MNLSRFFIRRPVAAIVLSLLILLAGLLAYLRLPVEQFPDIDPPTVTVSTTYPGASPEEVESTVTTPIEEALNGVEGIKYI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 81 RSTSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVDEINTDQFPIMTVNLSG-TYSLARLKTVAED- 158
Cdd:COG0841 81 TSTSSEGSSSITVEFELGTDIDEALVDVQNAVDRARSDLPEDVEPPGVTKVNPSDFPVMVLALSSdDLDELELSDYAERn 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 159 LQDDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQFDQPaQQ 238
Cdd:COG0841 161 IKDRLERVPGVGQVQIFGGREREIRIWLDPDKLAAYGLTLADVANAIRAQNVDVPAGRIGGGDREYTVRTNGRLKTP-EE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 239 IEELVVKTTaNGRTVQVKDVADVIFGFKDRTSYSRLrvlkreraDGEtvsvpaserrtaQVISLNVTKRPGANILETSDA 318
Cdd:COG0841 240 FENIVIRTN-DGSVVRLGDVARVEDGAEDYRSIARL--------NGK------------PAVGLAIQKQPGANALEVADA 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 319 VKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLG-VRNATLVGIAIPLSMFTSFLVFQA 395
Cdd:COG0841 299 VRAKLEELqaSLPEGVELTIVYDQSEFIRASIEEVVKTLLEAILLVVLVVFLFLRsWRATLIPAVAIPVSLIGTFAVMYL 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 396 LGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEF 475
Cdd:COG0841 379 LGFSLNILTLFALVLAIGIVVDDAIVVVENIERHMEEGLSPLEAAIKGAREVAGAVIASTLTLVAVFLPLAFMGGITGQL 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 476 MSYMPLTLIITLTSSLFVALIINPVITGFFvevkGRSNGEKGSSRWpalaryggvglilllgvtlgianwktlvvvatav 555
Cdd:COG0841 459 FRQFALTVAIALLISLFVALTLTPALCARL----LKPHPKGKKGRF---------------------------------- 500
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 556 palyllhvyvmspigDRFVESGLPSLIRWYRGYLQRMLERDYsvpyaflrntgaltalaagallaaggglittvagqtag 635
Cdd:COG0841 501 ---------------FRAFNRGFDRLTRGYGRLLRWALRHRK-------------------------------------- 527
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 636 llllvpggvlaalgalgvlvhtlesiylggwtsvkggvgllAVMLAVLGLnylaggigpgtmlrlaaapvfvvgvgliga 715
Cdd:COG0841 528 -----------------------------------------LTLLVALAL------------------------------ 536
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 716 lfntrdrllltdtraallngslggLVLIVGLYLVAPTGqaFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKLl 795
Cdd:COG0841 537 ------------------------LALSVLLFGRLPTE--FFPEEDQGQIIVSVQLPPGTSLERTEAVVRQVEEILLEV- 589
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 796 dqnpnseANIENLLVNVGvggdaqFGGGAQQPERSRVSLNMVDYAERPESSTRTLEKMRAQLQGIPGTEIEFTK-QEQGP 874
Cdd:COG0841 590 -------PEVESVFSVVG------FSGGGSGSNSGTIFVTLKPWDERDRSADEIIARLREKLAKIPGARVFVFQpPAGGL 656
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 875 PTGPPVNIELSGPEFERIVQISNEVKRRLtdaaqsGRLPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLSTSQIAQTVRT 954
Cdd:COG0841 657 GSGAPIEVQLQGDDLEELAAAAEKLLAAL------RQIPGLVDVRSDLQLGKPELQLDIDREKAAALGVTVADVASTLRA 730
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 955 AIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNRVVTVSGAAA 1034
Cdd:COG0841 731 ALGGRYVNDFNRGGREYDVRVQAPEEDRNSPEDLENLYVRTPDGEMVPLSSVATIEEGTGPSSINRYNGQRSVTVSANLA 810
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1035 PGYNGPEVLTRVQDELSEyrQGLPPGYTMEYTGGNEDQQESFGFLTTALLIGASLILLILIVEFNSISAPFIIMVAVGLS 1114
Cdd:COG0841 811 PGVSLGEALAAIEELAAE--LKLPPGVSIEFTGQAEEEQESFSSLGLAFLLALLLVYLVLAAQFESFIQPLIILLTVPLA 888
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1115 MIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLLTALTTILGLVPL 1194
Cdd:COG0841 889 LIGALLGLLLTGTPLNIYSQIGLIMLIGIVVKNAILLVDFANQLREEGMSLREAILEAARLRLRPILMTSLATILGLLPL 968
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2255980393 1195 TFGInvdfvglladfapnfqfgSENTQFWGPMGTAIISGLTFATFLTLVIVPVMYSVFDSVSLRL 1259
Cdd:COG0841 969 ALGT------------------GAGAEFRQPLGIAVIGGLLFSTLLTLFVVPVLYVLLDRLRRRL 1015
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
3-1253 |
0e+00 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 586.57 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 3 ITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRS 82
Cdd:pfam00873 1 MSKFFIRRPIFTLVLAIAILLAGILSFFSLPVDAFPEIAPPTVQVSTSYPGASPEEVEDTVTQPIEQAMNGLDGLKYMSS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 83 TSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVDEINTDQFPIMTVNLS---GTYSLARLKT-VAED 158
Cdd:pfam00873 81 QSSYGLSSITLTFELGTDIDIARQDVQNRLQLATPLLPEGVQRPGISVIKTSLGPIMVLAVTspdGSYTQTDLRDyADTN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 159 LQDDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQFdQPAQQ 238
Cdd:pfam00873 161 IKPQLSRVPGVGDVQLFGGSEYAMRIWLDPQKLARYGLTLTDVVSALKEQNVNIGAGQLEGQGLQALIRAQGQL-QSAED 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 239 IEELVVKtTANGRTVQVKDVADVIFGFKDRTSYSRLrvlkreraDGEtvsvpaserrtaQVISLNVTKRPGANILETSDA 318
Cdd:pfam00873 240 FEKIIVK-NQDGSPVRLRDVATVELGSELYRGFATF--------NGK------------PAVGLGVQKLPGANAIETADA 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 319 VKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQA 395
Cdd:pfam00873 299 VRAKLAELkpTFPQGVEIVVVYDTTPFIRASIEEVVKTLLEAIVLVILVMFLFLQNWRATLIpAIAIPLSLLGTFAVMKA 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 396 LGYTLNFIILFSLIIALGMLVDNAVVVIENIYRF-REQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGE 474
Cdd:pfam00873 379 FGFSINTLTLGGLVLAIGLVVDDAIVVVENIERVlEENGLKPLEAAYKSMGEIGGALVAIALVLSAVFLPILFLGGLTGR 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 475 FMSYMPLTLIITLTSSLFVALIINPVITGFFveVKGRSNGEKGssrwpalaryggvglilllgvtlGIANWKTLVVVAta 554
Cdd:pfam00873 459 IFRQFAITIVLAILLSVLVALTLTPALCATL--LKPRREPKHG-----------------------GFFRWFNRMFDR-- 511
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 555 vpalyllhvyvmspigdrfvesglpsLIRWYRGYLQRmlerdysvpyaflrntgaltalaagallaaggglittvagqta 634
Cdd:pfam00873 512 --------------------------LTRGYAKLLAK------------------------------------------- 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 635 gllllvpggvlaalgalgVLVHTlesiylggwtsvkggvgllavmlavlglnylaggigpgtmlrlaaAPVFVVGVGLIG 714
Cdd:pfam00873 523 ------------------VLRHT---------------------------------------------AVVLLVALLLVV 539
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 715 ALfntrdrllltdtraallngslgglvlivgLYLVAPTGQAFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKl 794
Cdd:pfam00873 540 GS-----------------------------VWLFVRIPTEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKE- 589
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 795 ldqnpnsEANIENLLVNVGVGgdaqFGGGAQQPERSRVSLNMVDYAERPESSTRT---LEKMRAQLQGIPGTEIEFTK-- 869
Cdd:pfam00873 590 -------KPEVESVFAVTGFA----FSGDNNGPNSGDAFISLKPWKERPGPEKSVqalIERLRKALKQIPGANVFLFQpi 658
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 870 QEQGPPTGPPVNIELS----GPEFERIVQISNEVKRRLtdaaqsGRLPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLST 945
Cdd:pfam00873 659 QLRGLGTISGFRSDLQvkifGDDLDALDEARNQILAAL------AQLPGLSDVRSDGQEDQPQLQVNIDREKAARLGVSI 732
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 946 SQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNR 1025
Cdd:pfam00873 733 QDINDTLSTALGGSYVNDFPEGGRVYDVVVQLPEDFRSSPEDIGQLYVRNPYGKMIPLSAFAKIEWGYGPPSINRYNGFR 812
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1026 VVTVSGAAAPGYNGPEVLTRVQDELSEYrqGLPPGYTMEYTGGNEDQQESFGFLTTALLIGASLILLILIVEFNSISAPF 1105
Cdd:pfam00873 813 SIVISGNVAAGDSLGDAMEAMAQIAKQV--KLPPGYGYTWTGQFEQEQLAGNSLPILIALALLVVFLVLAALYESWSDPL 890
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1106 IIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLR-GRGQDKQAAIVEGGATRLRPVLLTA 1184
Cdd:pfam00873 891 SIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELReQEGKSLEEAILEACRLRLRPILMTA 970
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2255980393 1185 LTTILGLVPLTFGINVdfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLTLVIVPVMYSVFD 1253
Cdd:pfam00873 971 LAAILGVLPLALSTGA---------------GSELQQ---PLGIVVFGGLVTSTVLTLLVVPVFYVLFH 1021
|
|
| CusA |
COG3696 |
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism]; |
2-1252 |
3.24e-155 |
|
Cu/Ag efflux pump CusA [Inorganic ion transport and metabolism];
Pssm-ID: 442911 [Multi-domain] Cd Length: 1031 Bit Score: 494.16 E-value: 3.24e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 2 KITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMR 81
Cdd:COG3696 4 RIIRFSLRNRLLVLLLTLLLAAAGIYSLRRLPIDAFPDITNVQVQVITEAPGLSPEEVEQQVTYPIETALNGLPGVKEVR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 82 STSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVE---EPL---VDEIntdqFPIMTVNLSGTYSLARLKTv 155
Cdd:COG3696 84 SISRFGLSVVTVIFEDGTDIYWARQLVLERLQQVREQLPAGVTpelGPIstgLGEI----YQYTLESDPGKYSLMELRT- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 156 aedLQD-----DLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDG 230
Cdd:COG3696 159 ---LQDwvirpQLRSVPGVAEVNSFGGFVKQYQVLVDPAKLRAYGLTLDDVIEALERNNANVGGGYIERGGQEYLVRGIG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 231 QFdQPAQQIEELVVKTtANGRTVQVKDVADVIFGFKDRTSYsrlrvlkreradgetvsvpASERRTAQVISLNVTKRPGA 310
Cdd:COG3696 236 LI-RSLEDIENIVVKT-RNGTPVLLRDVAEVRIGPAPRRGA-------------------ATLNGEGEVVGGIVLMLKGE 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 311 NILETSDAVKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLG-VRNATLVGIAIPLSMF 387
Cdd:COG3696 295 NALEVIEAVKAKLAELkpSLPEGVKIVPFYDRSDLIDRAIHTVTKNLLEGALLVILVLFLFLGnLRAALIVALAIPLSLL 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 388 TSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQ------GYSRWESARLGTAEVGGPVVAATATTVSA 461
Cdd:COG3696 375 FAFIVMRLFGISANLMSLGGLAIDFGIIVDGAVVMVENILRRLEEnraagtPRERLEVVLEAAREVRRPIFFATLIIILV 454
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 462 FAPMLLWPGIIGEFMSYMPLTLIITLTSSLFVALIINPVITGFFVevKGRsngekgssrwpalaryggvglilllgvtlg 541
Cdd:COG3696 455 FLPIFTLEGVEGKLFRPMALTVIFALLGALLLSLTLVPVLASLLL--RGK------------------------------ 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 542 IANWKTLVVvatavpalyllhvyvmspigdRFvesglpsLIRWYRGYLQRMLERdysvpyaflrntgaltalaagallaa 621
Cdd:COG3696 503 VPEKENPLV---------------------RW-------LKRLYRPLLRWALRH-------------------------- 528
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 622 ggglittvagqtagllllvpggvlaalgalgvlvhtlesiylggwtsvkggvgllavmlavlglnylaggigpgtmlrla 701
Cdd:COG3696 --------------------------------------------------------------------------------
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 702 aaPVFVVGVGLigalfntrdrllltdtraallngslggLVLIVGLYLVAPTGQAFFPDTDPNRVQITAEAPLGTNIEASN 781
Cdd:COG3696 529 --PKLVLAVAL---------------------------VLLVLALALFPRLGSEFLPELDEGDLLVMATLPPGISLEESV 579
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 782 RIAQTVgDRILKLLDQnpnseanIENLLVNVG---VGGDAQfgggaqQPERSRVSLNMVDYAERPESSTR--TLEKMRAQ 856
Cdd:COG3696 580 ELGQQV-ERILKSFPE-------VESVVSRTGraeDATDPM------GVNMSETFVILKPRSEWRSGRTKeeLIAEMREA 645
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 857 LQGIPGTEIEFTkqeqgPP---------TG--PPVNIELSGPEFERIVQISNEVKRRLtdaaqsGRLPGLVDVTDNLNTG 925
Cdd:COG3696 646 LEQIPGVNFNFS-----QPiqmrvdellSGvrADVAVKIFGDDLDVLRRLAEQIEAVL------KTVPGAADVQVERVTG 714
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 926 RPEVQVDVDRAQAAEYGLSTSQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTS 1005
Cdd:COG3696 715 LPQLDIRIDRDAAARYGLNVADVQDVVETAIGGKAVGQVYEGERRFDIVVRLPEELRDDPEAIRNLPIPTPSGAQVPLSQ 794
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1006 VADIEEGTGFGSITRIDQNRVVTVS---------GAAApgyngpEVLTRVQDELSeyrqgLPPGYTMEYTGGNEDQQESF 1076
Cdd:COG3696 795 VADIEVVEGPNQISRENGRRRIVVQanvrgrdlgSFVA------EAQAKVAEQVK-----LPPGYYIEWGGQFENLQRAT 863
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1077 GFLTTALLIGASLILLILIVEFNSISAPFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIM 1156
Cdd:COG3696 864 ARLAIVVPLALLLIFLLLYLAFGSVRDALLILLNVPFALIGGVLALWLRGMPLSVSAGVGFIALFGVAVLNGVVLVSYIN 943
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1157 QLRGRGQDKQAAIVEGGATRLRPVLLTALTTILGLVPLTFGINVdfvglladfapnfqfGSEnTQfwGPMGTAIISGLTF 1236
Cdd:COG3696 944 QLRAEGLDLREAIIEGALERLRPVLMTALVAALGLLPMALSTGP---------------GSE-VQ--RPLATVVIGGLIT 1005
|
1290
....*....|....*.
gi 2255980393 1237 ATFLTLVIVPVMYSVF 1252
Cdd:COG3696 1006 STLLTLLVLPALYLLF 1021
|
|
| RND_permease_2 |
NF033617 |
multidrug efflux RND transporter permease subunit; |
4-1254 |
2.06e-146 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 411236 [Multi-domain] Cd Length: 1009 Bit Score: 469.88 E-value: 2.06e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 4 TNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRST 83
Cdd:NF033617 1 SDVFIKRPVATLLLSLLILLLGLLAFRKLPVREYPEVDFPTITVSTSYPGASPELMQSSITQPLEQQLAQIEGIDEMTSQ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 84 SSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVD-EINTDQFPIMTVNL-SGTYSLARLKTVAED-LQ 160
Cdd:NF033617 81 SSLGYSTITLQFRLGTDLDVALSEVQAAINAAQSLLPSEAPDPPVYrKANSADTPIMYIGLtSEEMPRGQLTDYAERvLA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 161 DDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQFdQPAQQIE 240
Cdd:NF033617 161 PKLSQINGVGSVDVSGGQRPAMRVWLDPEKMAARGLTADDVRSALNSNNVNSPKGAVRGDSVVSTVRANDQL-KTAEDYE 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 241 ELVVKTTANGRTVQVKDVADVIFGfkdrTSYSRLRVlkreRADGetvsVPAserrtaqvISLNVTKRPGANILETSDAVK 320
Cdd:NF033617 240 DLVIKYADNGAPVRLGDVATVELG----AENVRNRA----WANG----VPA--------VVLGINRQPGANPIEVADEIR 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 321 STLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQALG 397
Cdd:NF033617 300 ALLPELqeTLPKNIKVNVLYDRTRFIRASIDEVESTLLEAVALVILVVFLFLRNLRATLIpAVTVPLSLIGTFAVMYLFG 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 398 YTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEFMS 477
Cdd:NF033617 380 FSINLLTLMALVLAIGLVVDDAIVVVENIHRHIEEGESPLEAALKGAREIGFTVIAMTLTLVAVYLPILFMGGLTGRLFR 459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 478 YMPLTLIITLTSSLFVALIINPVITGFFVevkgrSNGEKGSSRWPALaryggvglilllgvtlgianwktlvvvatavpa 557
Cdd:NF033617 460 EFAVTLAGAVIISGIVALTLTPMMCSRLL-----KANEKPGRFARAV--------------------------------- 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 558 lyllhvyvmspigDRFVEsglpSLIRWYRGYLQrmlerdysvpyaflrntgaltalaagallaaggglittvagqtagll 637
Cdd:NF033617 502 -------------DRFFD----GLTARYGRGLK----------------------------------------------- 517
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 638 llvpggvlaalgalGVLVHTLEsiylggwtsvkggvgLLAVMLAVLGLNYlaggigpgtmlrlaaapvfvvgvgligalf 717
Cdd:NF033617 518 --------------WVLKHRPL---------------TLVVALATLALLP------------------------------ 538
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 718 ntrdrllltdtraallngslgglvlivGLYLVAPTGqaFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKLLDQ 797
Cdd:NF033617 539 ---------------------------LLYVFIPKE--LAPSEDRGVIFGMIQAPQSISLDYMSAKMRDVEKILSSDPEV 589
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 798 npnseaniENLLVNVGVGGDAQFGGGaqqpersRVSLNMVDYAERPESSTRTLEKMRAQLQGIPGTEIEFTKQEQGPPTG 877
Cdd:NF033617 590 --------QSLTSFNGVGGNPGDNTG-------FGIINLKPWDERDVSAQEIIDRLRPKLAKVPGMDLFLFPLQDLPGGA 654
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 878 ----PPVNIELSGPEFERIVQISNEVKRRLTdaaqsgRLPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLSTSQIAQTVR 953
Cdd:NF033617 655 gsslPQYQVTLTPSDYDSLFTWAEKLKEKLR------KSPQFADVDSDLQDKGPELNVDIDRDKAARLGISMQDIGSTLE 728
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 954 TAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNRVVTVSGAA 1033
Cdd:NF033617 729 VAFGQRQVNTIYTDGNQYKVVLEVDRRYRLNPEALNQIYVRSNDGKLVPLSTLAKIEERAAPLSLNHFNQFNSATLSFNL 808
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1034 APGYNGPEVLTRVQDELSEYrqgLPPGYTMEYTGGNEDQQESFGflTTALLIGASL--ILLILIVEFNSISAPFIIMVAV 1111
Cdd:NF033617 809 APGVSLGEAIEALDQAAKEL---LPSGISGSFQGAARAFQEEGS--SLLFLFLLALaaIYLVLAIQYESFVDPLTILSTV 883
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1112 GLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGR-GQDKQAAIVEGGATRLRPVLLTALTTILG 1190
Cdd:NF033617 884 PLAGCGALLALALGGQSMNIYAQIGLITLIGLVKKNGILMVEFANELQRHqGLSRREAIYQAAALRLRPILMTTLAMLLG 963
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2255980393 1191 LVPLTFGINVdfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLTLVIVPVMYSVFDS 1254
Cdd:NF033617 964 AIPLMLSTGA---------------GAESRF---PLGIVIVGGLGVGTLFTLFVLPVVYLLLAR 1009
|
|
| 2A0602 |
TIGR00915 |
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins ... |
19-1251 |
2.51e-91 |
|
The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate]
Pssm-ID: 273335 [Multi-domain] Cd Length: 1044 Bit Score: 318.98 E-value: 2.51e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 19 LILAVGGLaSYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRSTS-SEGVSTIVVEFTP 97
Cdd:TIGR00915 18 IIMLAGTL-SILSLPVSQYPSIAPPAITVSASYPGASAQTVQDTVTQVIEQNMNGIDGLRYMSSSSdSDGSMTITLTFEQ 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 98 DVNTDKAYQEVNRAVDRAQPDLPGAVEEP---LVDEINTDQFPIMTVNLSGTYSLARLKT-VAEDLQDDLEGISSVLEAN 173
Cdd:TIGR00915 97 GTDPDIAQVQVQNKLQLATPLLPQEVQRQgvrVEKASSNFLMVIGLVSDDGSMTKEDLSDyAASNMVDPLSRLEGVGDVQ 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 174 LIGGLtREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSI------DVNRLNYLVRVDGQFdQPAQQIEELVVKTT 247
Cdd:TIGR00915 177 LFGSQ-YAMRIWLDPAKLNSYQLTPADVISAISAQNAQISAGQLgglpavPGQQLNATIIAQTRL-QTPEQFENILLKVN 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 248 ANGRTVQVKDVADVIFGFKDRTSYSRLRvlkreradgetvSVPASerrtaqviSLNVTKRPGANILETSDAVKSTLDAFS 327
Cdd:TIGR00915 255 TDGSQVRLKDVARVELGGENYSISARFN------------GKPAS--------GLAIKLATGANALDTAKAVKAELAVLE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 328 --FPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQALGYTLNFII 404
Cdd:TIGR00915 315 pfFPQGMKYVYPYDTTPFVEASIEEVVHTLIEAIVLVFLVMYLFLQNFRATLIpTIAVPVVLLGTFAVLAAFGFSINTLT 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 405 LFSLIIALGMLVDNAVVVIENIYRF-REQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEFMSYMPLTL 483
Cdd:TIGR00915 395 MFAMVLAIGLLVDDAIVVVENVERVmAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITI 474
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 484 IITLTSSLFVALIINPVITGFFV-EVKGRSNGEKGSsrwpalaryggvglilllgvtlGIANWktlvvvatavpalyllh 562
Cdd:TIGR00915 475 VSAMALSVLVALILTPALCATMLkPIEKGEHHEKKG----------------------GFFGW----------------- 515
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 563 vyvmspigdrfvesglpslirwyrgyLQRMLERdysvpyaflrntgaltalaagallaaggglittvagqtagllllvpg 642
Cdd:TIGR00915 516 --------------------------FNRMFDS----------------------------------------------- 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 643 gvlaalgalgvLVHTLEsiylggwtsvkGGVgllavmlavlglnylaggigpGTMLRLaAAPVFVVGVGLIGALfntrdr 722
Cdd:TIGR00915 523 -----------STHGYE-----------NGV---------------------GKILRR-RGRYLLVYVLLVGGM------ 552
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 723 llltdtraallngslgglvliVGLYLVAPTgqAFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKlldqnpNSE 802
Cdd:TIGR00915 553 ---------------------VFLFVRLPT--SFLPDEDQGVFMTIVQLPAGATAERTQAVLAQVTKYLLA------KEK 603
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 803 ANIENLLVNVGVGgdaqFGGGAQQPERSRVSLNmvDYAERPeSSTRTLEKMRAQLQGIPGTeiefTKQEQGPPTGPPVNI 882
Cdd:TIGR00915 604 ANVESVFTVNGFS----FAGRGQNMGMAFIRLK--DWEERT-GKENSVFAIAGRATGHFMQ----IKDAMVIAFVPPAIL 672
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 883 EL-------------SGPEFERIVQISNEVkrrLTDAAQSgrlPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLSTSQIA 949
Cdd:TIGR00915 673 ELgnatgfdfflqdrAGLGHEALLQARNQL---LGLAAQN---PALTRVRPNGLEDEPQLKIDIDREKAQALGVSIADIN 746
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 950 QTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNRVVTV 1029
Cdd:TIGR00915 747 TTLSTAWGSSYVNDFIDRGRVKRVYVQAEEDARMSPEDINKWYVRNASGEMVPFSAFATVRWEYGSPQLERYNGLPSMEI 826
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1030 SGAAAPGYNGPEVLtrvqDELSEYRQGLPPGYTMEYTGgnEDQQESFGFLTTALLIGASL--ILLILIVEFNSISAPFII 1107
Cdd:TIGR00915 827 LGSAAPGVSTGQAM----AAMEAIAQKLPPGFGFSWTG--MSYEERLSGSQAPALYALSLlvVFLCLAALYESWSIPVSV 900
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1108 MVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLLTALTT 1187
Cdd:TIGR00915 901 MLVVPLGIIGALLATTLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKELMAQGKSIVEAALEAARLRLRPILMTSLAF 980
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2255980393 1188 ILGLVPLTfginvdfvglladFAPNFQFGSENTqfwgpMGTAIISGLTFATFLTLVIVPVMYSV 1251
Cdd:TIGR00915 981 ILGVVPLA-------------ISTGAGSGSQHA-----IGTGVFGGMVTATVLAIFFVPLFYVV 1026
|
|
| 2A0601 |
TIGR00914 |
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation ... |
2-1252 |
5.20e-91 |
|
heavy metal efflux pump, CzcA family; This model represents a family of H+/heavy metal cation antiporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 129992 [Multi-domain] Cd Length: 1051 Bit Score: 318.24 E-value: 5.20e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 2 KITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMR 81
Cdd:TIGR00914 4 RIISFSVAQRWLVLLATLVMAILGIWSYNRLPIDAVPDITNVQVQINTSAPGYSPLEVEQRVTYPIETAMAGLPGLETTR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 82 STSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPL------VDEIN----TDQFPImTVNLSGTYSLAR 151
Cdd:TIGR00914 84 SLSRYGLSQVTVIFKDGTDLYFARQLVNERLQQARDNLPEGVSPEMgpistgLGEIFlytvEAEEGA-RKKDGGAYTLTD 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 152 LKTVAE-DLQDDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDG 230
Cdd:TIGR00914 163 LRTIQDwIIRPQLRTVPGVAEVNSIGGYVKQFLVAPDPEKLAAYGLSLADVVNALERNNQNVGAGYIERRGEQYLVRAPG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 231 QFdQPAQQIEELVVKtTANGRTVQVKDVADVIFGFKDRTSysrlrvlkreradgetvsvpASERRTAQVISLNVTKRPGA 310
Cdd:TIGR00914 243 QV-QSMDDIRNIVIA-TGEGVPIRIRDVARVQIGKELRTG--------------------AATENGKEVVLGTVFMLIGE 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 311 NILETSDAVKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLG-VRNATLVGIAIPLSMF 387
Cdd:TIGR00914 301 NSRTVAQAVGDKLETInkTLPEGVEIVTTYDRSQLVDAAIATVKKNLLEGALLVIVILFLFLGnIRAALIAATVIPLSLL 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 388 TSFLVFQALGYTLNFIILFSLiiALGMLVDNAVVVIEN-IYRFREQGY---------SRWESARLGTAEVGGPVVAATAT 457
Cdd:TIGR00914 381 ITFIGMVFQGISANLMSLGAL--DFGLIVDGAVVIVENaHRRLAEAQHhhgrqltlkERLHEVFAASREVRRPLIFGQLI 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 458 TVSAFAPMLLWPGIIGEFMSYMPLTLIITLTSSLFVALIINPVITGFFVEVKgrsngekgssrwpalaryggvglilllg 537
Cdd:TIGR00914 459 ITLVFLPIFTLTGVEGKMFHPMAFTVVLALAGAMILSLTFVPAAVALFIRGK---------------------------- 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 538 vtlgianwktlvVVATAVPalyLLHVyvmspigdrfvesglpsLIRWYRGYLQRMLerdysvpyaflrntgaltalaaga 617
Cdd:TIGR00914 511 ------------VAEKENR---LMRV-----------------LKRRYEPLLERVL------------------------ 534
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 618 llaaggglittvagqtagllllvpggvlaalgalgvlvhtlesiylgGWTSVKGGVGLLAVMLAVLGLNYLaggigpgtm 697
Cdd:TIGR00914 535 -----------------------------------------------AWPAVVLGAAAVSIVLVVWIASRV--------- 558
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 698 lrlaaapvfvvgvgligalfntrdrllltdtraallngslgglvlivglylvaptGQAFFPDTDPNRVQITAEAPLGTNI 777
Cdd:TIGR00914 559 -------------------------------------------------------GGEFIPSLNEGDLAYQALRIPGTSL 583
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 778 EASNRIAQTVGDRILKLldqnpnseANIENLLvnvGVGGDAQFGGGAQQPERSRVSLNMVDYAERPESSTRT---LEKMR 854
Cdd:TIGR00914 584 AQSVAMQQTLEKLIKSF--------PEVARVF---AKTGTAEIATDPMPPNASDTYIILKPESQWPEGKKTKedlIEEIQ 652
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 855 AQLQGIPGTEIEFTkqeqgPPTGPPVNIELSGPEFERIVQISNEVKRRLTDAAQS-----GRLPGLVDVTDNLNTGRPEV 929
Cdd:TIGR00914 653 EATVRIPGNNYEFT-----QPIQMRFNELISGVRSDVAVKVFGDDLDDLDATAEKisavlKGVPGAADVKVEQTTGLPYL 727
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 930 QVDVDRAQAAEYGLSTSQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRG-----QQIPLT 1004
Cdd:TIGR00914 728 TVEIDREKAARYGLTVGDVQDTVATAVGGRMSGETFEGDRRFDIVIRLPESLRESPQALRQLPIPLPLSedarkQFIPLS 807
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1005 SVADIEEGTGFGSITRIDQNRVVTVSGAAAP---GYNGPEVLTRVQDELSeyrqgLPPGYTMEYTGGNEDQQESFGFLTT 1081
Cdd:TIGR00914 808 DVADLRVSPGPNQISRENGKRRVVVSANVRGrdlGSFVDDAKKAIAEQVK-----LPPGYWITWGGQFEQLQSATKRLQI 882
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1082 ALLIGASLILLILIVEFNSISAPFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGR 1161
Cdd:TIGR00914 883 VVPVTLLLIFVLLYAAFGNVKDALLVFTGIPFALTGGVFALWLRGIPLSISAAVGFIALSGVAVLNGLVMISFIRKLLEE 962
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1162 GQDKQAAIVEGGATRLRPVLLTALTTILGLVPLTFGINVdfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLT 1241
Cdd:TIGR00914 963 GPSLDEAVYEGALTRVRPVLMTALVASLGFVPMAIATGT---------------GAEVQR---PLATVVIGGIITATLLT 1024
|
1290
....*....|.
gi 2255980393 1242 LVIVPVMYSVF 1252
Cdd:TIGR00914 1025 LFVLPALYRLV 1035
|
|
| PRK09579 |
PRK09579 |
multidrug efflux RND transporter permease subunit; |
1-1251 |
1.13e-65 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169983 [Multi-domain] Cd Length: 1017 Bit Score: 242.43 E-value: 1.13e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1 MKITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEM 80
Cdd:PRK09579 1 MAFTDPFIRRPVLASVVSLLIVLLGFQAWSKLQIRQYPQMENALITVTTAYPGANAETIQGYITQPLQQSLASAEGIDYM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 81 RSTSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVDEINTDQFPIMTVNLSG--------TYSLARL 152
Cdd:PRK09579 81 TSVSRQNFSIISIYARIGADSDRLFTELLAKANEVKNQLPQDAEDPVLSKEAADASALMYISFYSeemsnpqiTDYLSRV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 153 ktvaedLQDDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQF 232
Cdd:PRK09579 161 ------IQPKLATLPGMAEAEILGNQVFAMRLWLDPVKLAGFGLSAGDVTQAVRRYNFLSAAGEVKGEYVVTSINASTEL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 233 dQPAQQIEELVVKTTANGRtVQVKDVADVIFGFKDRTSYSRLrvlkreraDGetvsVPAserrtaqvISLNVTKRPGANI 312
Cdd:PRK09579 235 -KSAEAFAAIPVKTSGDSR-VLLGDVARVEMGAENYDSISSF--------DG----IPS--------VYIGIKATPSANP 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 313 LETSDAVKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLG-VRNATLVGIAIPLSMFTS 389
Cdd:PRK09579 293 LDVIKEVRAIMPELesQLPPNLKVSIAYDATLFIQASIDEVVKTLGEAVLIVIVVVFLFLGaLRSVLIPVVTIPLSMIGV 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 390 FLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWP 469
Cdd:PRK09579 373 LFFMQMMGYSINLLTLLAMVLAIGLVVDDAIVVVENIHRHIEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLT 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 470 GIIGEFMSYMPLTLIITLTSSLFVALIINPVITGFFVEVKGRSNGekgssrwpalaryggvglilllgvtlgianwktlv 549
Cdd:PRK09579 453 GLTGALFKEFALTLAGAVIISGIVALTLSPMMCALLLRHEENPSG----------------------------------- 497
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 550 vvatavpalyLLHVYvmspigDRFVESglpslirwYRGYLQRMLErdysvpyaflrntgaltalaagallaaggglittv 629
Cdd:PRK09579 498 ----------LAHRL------DRLFER--------LKQRYQRALH----------------------------------- 518
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 630 agqtagllllvpggvlaalgalgvlvhtlesiylggwtsvkggvgllavmlavlglnylaggigpGTMLRLAAAPVFVVG 709
Cdd:PRK09579 519 -----------------------------------------------------------------GTLNTRPVVLVFAVI 533
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 710 V-GLIGALfntrdrLLLTDTRAAllngslgglvlivglylvaptgqaffPDTDPNRVQITAEAPLGTNIEASNriaqTVG 788
Cdd:PRK09579 534 VlALIPVL------LKFTQSELA--------------------------PEEDQGIIFMMSSSPQPANLDYLN----AYT 577
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 789 DRILKLLDQNPNSEANIEnllVNVGVGGDAQFGGGAQQPersrvslnmvdYAERPESSTRTLEKMRAQLQGIPGTEIEFT 868
Cdd:PRK09579 578 DEFTPIFKSFPEYYSSFQ---INGFNGVQSGIGGFLLKP-----------WNERERTQMELLPLVQAKLEEIPGLQIFGF 643
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 869 KQEQGPPTGP--PVNIELSGP-EFERIVQISNEVKRRltdAAQSGRLpGLVDVtdNLNTGRPEVQVDVDRAQAAEYGLST 945
Cdd:PRK09579 644 NLPSLPGTGEglPFQFVINTAnDYESLLQVAQRVKQR---AQESGKF-AFLDI--DLAFDKPEVVVDIDRAKAAQMGVSM 717
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 946 SQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNR 1025
Cdd:PRK09579 718 QDLGGTLATLLGEGEINRFTIDGRSYKVIAQVERPYRDNPGWLNNYYVKNEQGQLLPLSTLITLSDRARPRQLNQFQQLN 797
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1026 VVTVSGaaAPGYNGPEVLTRVQDELseyRQGLPPGYTMEYTGGNED--QQESFGFLTTALLIgaSLILLILIVEFNSISA 1103
Cdd:PRK09579 798 SAIISG--FPIVSMGEAIETVQQIA---REEAPEGFAFDYAGASRQyvQEGSALWVTFGLAL--AIIFLVLAAQFESFRD 870
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1104 PFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRG-RGQDKQAAIVEGGATRLRPVLL 1182
Cdd:PRK09579 871 PLVILVTVPLSICGALIPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRHeQGLSRREAIEEAAAIRLRPVLM 950
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2255980393 1183 TALTTILGLVPLTFGINvdfVGLLADFapnfqfgsentqfwgPMGTAIISGLTFATFLTLVIVPVMYSV 1251
Cdd:PRK09579 951 TTAAMVFGMVPLILATG---AGAVSRF---------------DIGLVIATGMSIGTLFTLFVLPCIYTL 1001
|
|
| PRK10503 |
PRK10503 |
MdtB/MuxB family multidrug efflux RND transporter permease subunit; |
13-1270 |
8.77e-65 |
|
MdtB/MuxB family multidrug efflux RND transporter permease subunit;
Pssm-ID: 182501 [Multi-domain] Cd Length: 1040 Bit Score: 240.02 E-value: 8.77e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 13 AIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRSTSSEGVSTIV 92
Cdd:PRK10503 22 ATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVIT 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 93 VEFTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLV-DEINTDQFPIMTVNLSGTyslARLKTVAEDLQD-----DLEGI 166
Cdd:PRK10503 102 LQFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVySKVNPADPPIMTLAVTST---AMPMTQVEDMVEtrvaqKISQV 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 167 SSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQFdQPAQQIEELVVkT 246
Cdd:PRK10503 179 SGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPTRAVTLSANDQM-QSAEEYRQLII-A 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 247 TANGRTVQVKDVADVIFGfkdrtsysrlrvlkrerADGETVSVPASERrtaQVISLNVTKRPGANILETSDAVKSTLDAF 326
Cdd:PRK10503 257 YQNGAPIRLGDVATVEQG-----------------AENSWLGAWANKQ---QAIVMNVQRQPGANIIATADSIRQMLPQL 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 327 --SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQALGYTLNFI 403
Cdd:PRK10503 317 teSLPKSVKVTVLSDRTTNIRASVDDTQFELMLAIALVVMIIYLFLRNIPATIIpGVAVPLSLIGTFAVMVFLDFSINNL 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 404 ILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEFMSYMPLTL 483
Cdd:PRK10503 397 TLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 484 IITLTSSLFVALIINPVItgffvevkgrsngekgssrwpalaryggvglilllgvtlgianwktlvvVATAVPALYLLHV 563
Cdd:PRK10503 477 AVAILISAVVSLTLTPMM-------------------------------------------------CARMLSQESLRKQ 507
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 564 YVMSPIGDRFVEsglpSLIRWYRGYLQRmlerdysvpyaflrntgaltalaagallaaggglittvagqtagllllvpgg 643
Cdd:PRK10503 508 NRFSRASERMFD----RVIAAYGRGLAK---------------------------------------------------- 531
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 644 vlaalgalgVLVHtlesiylggwtsvkggvgllavmlavlglnylaggigpgtmlrlaaaPVFVVGVgligalfntrdrl 723
Cdd:PRK10503 532 ---------VLNH-----------------------------------------------PWLTLSV------------- 542
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 724 lltdtraallngSLGGLVLIVGLYLVAPTGqaFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKlldqnpnsEA 803
Cdd:PRK10503 543 ------------ALSTLLLTVLLWIFIPKG--FFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQ--------DP 600
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 804 NIENLLVNVGVGGDAQFGGGAqqpersRVSLNMVDYAERPESSTRTLEKMRAQLQGIPGTEIEFTkqeqgPPTGPPVNIE 883
Cdd:PRK10503 601 AVQSLTSFVGVDGTNPSLNSA------RLQINLKPLDERDDRVQKVIARLQTAVAKVPGVDLYLQ-----PTQDLTIDTQ 669
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 884 LSGPEFERIVQ------ISNEVKRRLTDAAQsgrLPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLSTSQIAQTVRTAIQ 957
Cdd:PRK10503 670 VSRTQYQFTLQatsldaLSTWVPKLMEKLQQ---LPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFG 746
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 958 GTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNRVVTVSGAAAPGY 1037
Cdd:PRK10503 747 QRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIATIEQRFGPLSINHLDQFPSTTISFNVPDGY 826
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1038 NGPEVLTRVQDelSEYRQGLPPGYTMEYTGGNEDQQESFGflTTALLIGASLI--LLILIVEFNSISAPFIIMVAVGLSM 1115
Cdd:PRK10503 827 SLGDAVQAIMD--TEKTLNLPADITTQFQGSTLAFQSALG--STVWLIVAAVVamYIVLGVLYESFIHPITILSTLPTAG 902
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1116 IGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQL-RGRGQDKQAAIVEGGATRLRPVLLTALTTILGLVPL 1194
Cdd:PRK10503 903 VGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAeREQGMSPRDAIYQACLLRFRPILMTTLAALLGALPL 982
|
1210 1220 1230 1240 1250 1260 1270
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2255980393 1195 TFGINVdfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLTLVIVPVMYSVFDSVSLRLTTAFGGSSDDA 1270
Cdd:PRK10503 983 MLSTGV---------------GAELRR---PLGICMVGGLIVSQVLTLFTTPVIYLLFDRLALYTKSRFPRHEEEA 1040
|
|
| PRK10555 |
PRK10555 |
multidrug efflux RND transporter permease AcrD; |
16-1249 |
7.82e-63 |
|
multidrug efflux RND transporter permease AcrD;
Pssm-ID: 182544 [Multi-domain] Cd Length: 1037 Bit Score: 233.95 E-value: 7.82e-63
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 16 VFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRSTSSE-GVSTIVVE 94
Cdd:PRK10555 14 VLAILLCLTGTLAIFSLPVEQYPDLAPPNVRITANYPGASAQTLENTVTQVIEQNMTGLDNLMYMSSQSSGtGQASVTLS 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 95 FTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVDEINTDQFPIMTVNLSGT-YSLARLKT---VAEDLQDDLEGISSVL 170
Cdd:PRK10555 94 FKAGTDPDEAVQQVQNQLQSAMRKLPQAVQNQGVTVRKTGDTNILTIAFVSTdGSMDKQDIadyVASNIQDPLSRVNGVG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 171 EANLIGGlTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGG------SIDVNRLNYLVRVDGQFDQPaQQIEELVV 244
Cdd:PRK10555 174 DIDAYGS-QYSMRIWLDPAKLNSFQMTTKDVTDAIESQNAQIAVGqlggtpSVDKQALNATINAQSLLQTP-EQFRDITL 251
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 245 KTTANGRTVQVKDVADVIFGFKDRTSYSRLrvlkreraDGEtvsvPASerrtaqviSLNVTKRPGANILETSDAVKSTLD 324
Cdd:PRK10555 252 RVNQDGSEVTLGDVATVELGAEKYDYLSRF--------NGK----PAS--------GLGVKLASGANEMATAKLVLNRLD 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 325 AFS--FPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQALGYTLN 401
Cdd:PRK10555 312 ELAqyFPHGLEYKVAYETTSFVKASIEDVVKTLLEAIALVFLVMYLFLQNFRATLIpTIAVPVVLMGTFSVLYAFGYSIN 391
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 402 FIILFSLIIALGMLVDNAVVVIENIYR-FREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEFMSYMP 480
Cdd:PRK10555 392 TLTMFAMVLAIGLLVDDAIVVVENVERiMSEEGLTPREATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGTTGAIYRQFS 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 481 LTLIITLTSSLFVALIINPVITGFFVE--VKGRSNGEKGssrwpalaryggvglilllgvtlgianwktlvvvatavpal 558
Cdd:PRK10555 472 ITIVSAMVLSVLVAMILTPALCATLLKplKKGEHHGQKG----------------------------------------- 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 559 yllhvyvmspigdrfvesglpslirwYRGYLQRMLERDysvpyaflrntgaltalaagallaaggglittvagqtaglll 638
Cdd:PRK10555 511 --------------------------FFGWFNRMFNRN------------------------------------------ 522
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 639 lvpggvlaalgalgvlvhtlesiylggwtsvkggvgllavmlavlglnylaggigpgtmlrlaaAPVFVVGVGligalfn 718
Cdd:PRK10555 523 ----------------------------------------------------------------AERYEKGVA------- 531
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 719 trdRLLLTDTRAALLN-GSLGGLVLivgLYLVAPTgqAFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKlldq 797
Cdd:PRK10555 532 ---KILHRSLRWILIYvLLLGGMVF---LFLRLPT--SFLPLEDRGMFTTSVQLPSGSTQQQTLKVVEKVEKYYFT---- 599
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 798 npNSEANIENLLVNVGVGGdaqfGGGAQQPERSRVSLNmvDYAERP---ESSTRTLEKMRAQLQGIPgteiEFTKQEQGP 874
Cdd:PRK10555 600 --HEKDNVMSVFATVGSGP----GGNGQNVARMFIRLK--DWDERDsktGTSFAIIERATKAFNKIK----EARVIASSP 667
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 875 P------TGPPVNIEL---SGPEFERIVQISNevkrRLTDAAQSGrlPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLST 945
Cdd:PRK10555 668 PaisglgSSAGFDMELqdhAGAGHDALMAARN----QLLALAAKN--PELTRVRHNGLDDSPQLQIDIDQRKAQALGVSI 741
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 946 SQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNR 1025
Cdd:PRK10555 742 DDINDTLQTAWGSSYVNDFMDRGRVKKVYVQAAAPYRMLPDDINLWYVRNKDGGMVPFSAFATSRWETGSPRLERYNGYS 821
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1026 VVTVSGAAAPGY-NGpevltRVQDELSEYRQGLPPGYTMEYTGGNedQQESFGFLTTALLIGASL--ILLILIVEFNSIS 1102
Cdd:PRK10555 822 AVEIVGEAAPGVsTG-----TAMDIMESLVKQLPNGFGLEWTAMS--YQERLSGAQAPALYAISLlvVFLCLAALYESWS 894
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1103 APFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLL 1182
Cdd:PRK10555 895 VPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEMNQKGHDLFEATLHASRQRLRPILM 974
|
1210 1220 1230 1240 1250 1260
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2255980393 1183 TALTTILGLVPLTFGINVdfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLTLVIVPVMY 1249
Cdd:PRK10555 975 TSLAFIFGVLPMATSTGA---------------GSGSQH---AVGTGVMGGMISATILAIFFVPLFF 1023
|
|
| PRK10614 |
PRK10614 |
multidrug efflux system subunit MdtC; Provisional |
1-1258 |
2.04e-60 |
|
multidrug efflux system subunit MdtC; Provisional
Pssm-ID: 182589 [Multi-domain] Cd Length: 1025 Bit Score: 226.15 E-value: 2.04e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1 MKITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEM 80
Cdd:PRK10614 1 MKFFALFIYRPVATILLSLAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEM 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 81 RSTSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQPDLP-GAVEEPLVDEINTDQFPIMTVNL-SGTYSLARLKTVAE- 157
Cdd:PRK10614 81 TSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLPsGMPSRPTYRKANPSDAPIMILTLtSDTYSQGQLYDFASt 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 158 DLQDDLEGISSVLEANLIGGLTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSIDVNRLNYLVRVDGQFdQPAQ 237
Cdd:PRK10614 161 QLAQTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRQAISNANVRRPQGAVEDGTHRWQIQTNDEL-KTAA 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 238 QIEELVVKTTaNGRTVQVKDVADVIFGFKDrtsysrlrvlkrERADGETVSVPAserrtaqvISLNVTKRPGANILETSD 317
Cdd:PRK10614 240 EYQPLIIHYN-NGAAVRLGDVATVTDSVQD------------VRNAGMTNAKPA--------ILLMIRKLPEANIIQTVD 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 318 AVKSTLDAF--SFPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQ 394
Cdd:PRK10614 299 RIRAKLPELreTIPAAIDLQIAQDRSPTIRASLEEVEQTLAISVALVILVVFLFLRSGRATLIpAVAVPVSLIGTFAAMY 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 395 ALGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGE 474
Cdd:PRK10614 379 LCGFSLNNLSLMALTIATGFVVDDAIVVLENISRHLEAGMKPLQAALQGVREVGFTVLSMSLSLVAVFLPLLLMGGLPGR 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 475 FMSYMPLTLIITLTSSLFVALIINPVITGFFVevkgRSNGEKGSSRWPALARyggvglilllgvtlgianwktlVVVAta 554
Cdd:PRK10614 459 LFREFAVTLSVAIGISLLVSLTLTPMMCAWLL----KSSKPREQKRLRGFGR----------------------MLVA-- 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 555 vpalyllhvyvmspigdrfVESGLPSLIRWyrgylqrmlerdysvpyaflrntgaltalaagallaaggglittvagqta 634
Cdd:PRK10614 511 -------------------LQQGYGRSLKW-------------------------------------------------- 521
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 635 gllllvpggvlaalgalgVLVHTLesiylggWTsvkggvglLAVMLAVLGLNylaggigpgtmlrlaaapvfvvgvglig 714
Cdd:PRK10614 522 ------------------VLNHTR-------WV--------GVVLLGTIALN---------------------------- 540
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 715 alfntrdrllltdtraallngslgglvliVGLYLVAPtgQAFFPDTDPNRVQITAEAPLGTNIEASNRIAQtvgdRILKL 794
Cdd:PRK10614 541 -----------------------------VWLYISIP--KTFFPEQDTGRLMGFIQADQSISFQAMRGKLQ----DFMKI 585
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 795 LDQNPnseaNIENLlvnVGVGGDAQFGGGAQqpersRVSLNMVDyaERPESSTRTLEKMRAQLQGIPGTEIEFTkqeqgp 874
Cdd:PRK10614 586 IRDDP----AVDNV---TGFTGGSRVNSGMM-----FITLKPLS--ERSETAQQVIDRLRVKLAKEPGANLFLM------ 645
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 875 ptgPPVNIELSGPEFERIVQIS---------NEVKRRLTDAAqsGRLPGLVDVTDNLNTGRPEVQVDVDRAQAAEYGLST 945
Cdd:PRK10614 646 ---AVQDIRVGGRQSNASYQYTllsddlaalREWEPKIRKAL--AALPELADVNSDQQDKGAEMALTYDRDTMARLGIDV 720
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 946 SQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNR 1025
Cdd:PRK10614 721 QAANSLLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGLSA 800
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1026 VVTVSGAAAPGYNGPEVLTRVQDELSEYrqGLPPGYTMEYTGGNEDQQESFGflTTALLIGASLI--LLILIVEFNSISA 1103
Cdd:PRK10614 801 ASTISFNLPTGKSLSDASAAIERAMTQL--GVPSTVRGSFAGTAQVFQETMN--SQLILILAAIAtvYIVLGILYESYVH 876
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1104 PFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQ-DKQAAIVEGGATRLRPVLL 1182
Cdd:PRK10614 877 PLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRNGNlTAQEAIFQACLLRFRPIMM 956
|
1210 1220 1230 1240 1250 1260 1270
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2255980393 1183 TALTTILGLVPLTFGiNVDfvglladfapnfqfGSENTQfwgPMGTAIISGLTFATFLTLVIVPVMYSVFDSVSLR 1258
Cdd:PRK10614 957 TTLAALFGALPLVLS-GGD--------------GAELRQ---PLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLR 1014
|
|
| PRK15127 |
PRK15127 |
multidrug efflux RND transporter permease subunit AcrB; |
16-1251 |
2.35e-56 |
|
multidrug efflux RND transporter permease subunit AcrB;
Pssm-ID: 185081 [Multi-domain] Cd Length: 1049 Bit Score: 213.61 E-value: 2.35e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 16 VFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRSTS-SEGVSTIVVE 94
Cdd:PRK15127 14 VIAIIIMLAGGLAILKLPVAQYPTIAPPAVTISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSdSTGTVQITLT 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 95 FTPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVD-EINTDQFPIMT--VNLSGTYSLARLKT-VAEDLQDDLEGISSVL 170
Cdd:PRK15127 94 FESGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSvEKSSSSFLMVVgvINTDGTMTQEDISDyVAANMKDPISRTSGVG 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 171 EANLIGGlTREVQVNVDLAALKNYNVSYNSLVNTIQQENTNIPGGsidvnrlnylvRVDGQFDQPAQQIEELVVKTTang 250
Cdd:PRK15127 174 DVQLFGS-QYAMRIWMNPNELNKFQLTPVDVINAIKAQNAQVAAG-----------QLGGTPPVKGQQLNASIIAQT--- 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 251 RTVQVKDVADVIFGFKDRTSYSRLRVLKRERADGETVSVPAseRRTAQVIS-LNVTKRPGANILETSDAVKSTLDAFS-- 327
Cdd:PRK15127 239 RLTSTEEFGKILLKVNQDGSRVRLRDVAKIELGGENYDIIA--EFNGQPASgLGIKLATGANALDTAAAIRAELAKMEpf 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 328 FPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFLVFQALGYTLNFIILF 406
Cdd:PRK15127 317 FPSGLKIVYPYDTTPFVKISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIpTIAVPVVLLGTFAVLAAFGFSINTLTMF 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 407 SLIIALGMLVDNAVVVIENIYR-FREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPGIIGEFMSYMPLTLII 485
Cdd:PRK15127 397 GMVLAIGLLVDDAIVVVENVERvMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQFSITIVS 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 486 TLTSSLFVALIINPVITGFFveVKGRSNGEKGSSRwpalaryggvglilllgvtlgianwktlvvvatavpalyllhvyv 565
Cdd:PRK15127 477 AMALSVLVALILTPALCATM--LKPIAKGDHGEGK--------------------------------------------- 509
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 566 mspigdrfvesglpsliRWYRGYLQRMLERDYSvpyaflrntgaltalaagallaaggglittvagqtagllllvpggvl 645
Cdd:PRK15127 510 -----------------KGFFGWFNRMFEKSTH----------------------------------------------- 525
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 646 aalgalgvlvHTLESIylggwtsvkggvgllavmlavlglnylaGGIGPGTMLRLAAAPVFVVGVGLigalfntrdrlll 725
Cdd:PRK15127 526 ----------HYTDSV----------------------------GNILRSTGRYLVLYLIIVVGMAY------------- 554
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 726 tdtraallngslgglvlivgLYLVAPTgqAFFPDTDPNRVQITAEAPLGTNIEASNRIAQTVGDRILKlldqnpNSEANI 805
Cdd:PRK15127 555 --------------------LFVRLPS--SFLPDEDQGVFLTMVQLPAGATQERTQKVLNEVTDYYLT------KEKNNV 606
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 806 ENLLVNVGVGgdaqFGGGAQQPERSRVSLNmvDYAERPESSTR----TLEKMRAQLQGIPGTEIEFTKQ---EQGPPTGP 878
Cdd:PRK15127 607 ESVFAVNGFG----FAGRGQNTGIAFVSLK--DWADRPGEENKveaiTMRATRAFSQIKDAMVFAFNLPaivELGTATGF 680
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 879 PVN-IELSGPEFERIVQISNEVkrrLTDAAQSGRLpgLVDVTDNLNTGRPEVQVDVDRAQAAEYGLSTSQIAQTVRTAIQ 957
Cdd:PRK15127 681 DFElIDQAGLGHEKLTQARNQL---LGEAAKHPDM--LVGVRPNGLEDTPQFKIDIDQEKAQALGVSISDINTTLGAAWG 755
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 958 GTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITRIDQNRVVTVSGAAAPGY 1037
Cdd:PRK15127 756 GSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGK 835
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1038 NGPEVLTRVQDELSEyrqgLPPGYTMEYTGGNEDQQESFGFLTTALLIGASLILLILIVEFNSISAPFIIMVAVGLSMIG 1117
Cdd:PRK15127 836 STGEAMELMEELASK----LPTGVGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIG 911
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1118 VLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDY---IMQLRGRGQDKqaAIVEGGATRLRPVLLTALTTILGLVPL 1194
Cdd:PRK15127 912 ALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFakdLMDKEGKGLIE--ATLEAVRMRLRPILMTSLAFILGVMPL 989
|
1210 1220 1230 1240 1250
....*....|....*....|....*....|....*....|....*....|....*..
gi 2255980393 1195 TFGINVDfvglladfapnfqFGSENTqfwgpMGTAIISGLTFATFLTLVIVPVMYSV 1251
Cdd:PRK15127 990 VISSGAG-------------SGAQNA-----VGTGVMGGMVTATVLAIFFVPVFFVV 1028
|
|
| PRK09577 |
PRK09577 |
multidrug efflux RND transporter permease subunit; |
16-1251 |
1.38e-55 |
|
multidrug efflux RND transporter permease subunit;
Pssm-ID: 169981 [Multi-domain] Cd Length: 1032 Bit Score: 211.25 E-value: 1.38e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 16 VFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEISSINGIDEMRSTSSEGVSTIVVEF 95
Cdd:PRK09577 14 VISLFIMLGGIFAIRALPVAQYPDIAPPVVSIYATYPGASAQVVEESVTALIEREMNGAPGLLYTSATSSAGQASLSLTF 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 96 TPDVNTDKAYQEVNRAVDRAQPDLPGAVEEPLVD-EINTDQFPIMtvnLSGTYSLARLKTVaedlqdDLEGISSvleANL 174
Cdd:PRK09577 94 KQGVNADLAAVEVQNRLKTVEARLPEPVRRDGIQvEKAADNIQLI---VSLTSDDGRLTGV------ELGEYAS---ANV 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 175 IGGLTR-----EVQ---------VNVDLAALKNYNVSYNSLVNTIQQENTNIPGGSI------DVNRLNYLVRVDGQFDQ 234
Cdd:PRK09577 162 LQALRRvegvgKVQfwgaeyamrIWPDPVKLAALGLTASDIASAVRAHNARVTIGDIgrsavpDSAPIAATVFADAPLKT 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 235 PAqQIEELVVKTTANGRTVQVKDVADVIFGFKDRTSYSRLrvlkreraDGETVSvpaserrtaqviSLNVTKRPGANILE 314
Cdd:PRK09577 242 PE-DFGAIALRARADGSALYLRDVARIEFGGNDYNYPSYV--------NGKTAT------------GMGIKLAPGSNAVA 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 315 TSDAVKSTLDAFS--FPSGTEVLLTGDQSENVQSLVTDLENNIISGLIFVIAVLLFFLGVRNATLV-GIAIPLSMFTSFL 391
Cdd:PRK09577 301 TEKRVRATMDELSryFPPGVKYQIPYETSSFVRVSMNKVVTTLIEAGVLVFLVMFLFMQNFRATLIpTLVVPVALLGTFG 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 392 VFQALGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFR-EQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPG 470
Cdd:PRK09577 381 VMLAAGFSINVLTMFGMVLAIGILVDDAIVVVENVERLMvEEGLSPYDATVKAMKQISGAIVGITVVLTSVFVPMAFFGG 460
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 471 IIGEFMSYMPLTLIITLTSSLFVALIINPVITGFFVE-VKGRSNGEKGSSRWpalaryggvglilllgvtlgianwktlv 549
Cdd:PRK09577 461 AVGNIYRQFALSLAVSIGFSAFLALSLTPALCATLLKpVDGDHHEKRGFFGW---------------------------- 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 550 vvatavpalyllhvyvmspiGDRFVesglPSLIRWYRGYLQRMLERDysvpyafLRntgaltalaagallaaggglittv 629
Cdd:PRK09577 513 --------------------FNRFV----ARSTQRYATRVGAILKRP-------LR------------------------ 537
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 630 agqtagllllvpggvlaalgalgvlvhtlesiylggWTSVKGGV-GLLAVMLAVLglnylaggigpgtmlrlaaapvfvv 708
Cdd:PRK09577 538 ------------------------------------WLVVYGALtAAAALLFTRL------------------------- 556
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 709 gvgligalfntrdrllltdtraallngslgglvlivglylvaPTgqAFFPDTDPNRVQITAEAPLGTNIEASnriAQTVG 788
Cdd:PRK09577 557 ------------------------------------------PT--AFLPDEDQGNFMVMVIRPQGTPLAET---MQSVR 589
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 789 DrILKLLDQNPNSEANIEnllvnvgVGGDAQFGGGaqqPERSRVSLNMVDYAERPESSTRT---LEKMRAQLQGIPGTEI 865
Cdd:PRK09577 590 E-VESYLRRHEPVAYTFA-------LGGFNLYGEG---PNGGMIFVTLKDWKERKAARDHVqaiVARINERFAGTPNTTV 658
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 866 EFTKQEQGPPTGppvniELSGPEFeRIVQISNEVKRRLTDA-----AQSGRLPGLVDVTDNLNTGRPEVQVDVDRAQAAE 940
Cdd:PRK09577 659 FAMNSPALPDLG-----STSGFDF-RLQDRGGLGYAAFVAAreqllAEGAKDPALTDLMFAGTQDAPQLKLDIDRAKASA 732
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 941 YGLSTSQIAQTVRTAIQGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLTVTNPRGQQIPLTSVADIEEGTGFGSITR 1020
Cdd:PRK09577 733 LGVSMDEINTTLAVMFGSDYIGDFMHGSQVRRVIVQADGRHRLDPDDVKKLRVRNAQGEMVPLAAFATLHWTLGPPQLTR 812
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1021 IDQNRVVTVSGAAAPGYNGPEVLTrvqdELSEYRQGLPPGYTMEYTGGNEDQQESFGflTTALLIGAS--LILLILIVEF 1098
Cdd:PRK09577 813 YNGYPSFTINGSAAPGHSSGEAMA----AIERIAATLPAGIGYAWSGQSFEERLSGA--QAPMLFALSvlVVFLALAALY 886
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1099 NSISAPFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLR 1178
Cdd:PRK09577 887 ESWSIPFAVMLVVPLGVIGAVLGVTLRGMPNDIYFKVGLIATIGLSAKNAILIVEVAKDLVAQRMSLADAALEAARLRLR 966
|
1210 1220 1230 1240 1250 1260 1270
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2255980393 1179 PVLLTALTTILGLVPLTfginvdfvglladFAPNFQFGSENTqfwgpMGTAIISGLTFATFLTLVIVPVMYSV 1251
Cdd:PRK09577 967 PIVMTSLAFGVGVLPLA-------------FASGAASGAQIA-----IGTGVLGGVITATVLAVFLVPLFFVV 1021
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
1041-1253 |
2.25e-14 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 78.36 E-value: 2.25e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1041 EVLTRVQDELSEYRQglpPGYTMEYTGG---NEDQQESFGF-LTTALLIGASLILLILIVEFNSISAPFIIMVAVGLSMI 1116
Cdd:COG1033 181 EVVAEIRAIIAKYED---PGVEVYLTGFpvlRGDIAEAIQSdLAIFFPLALLLILLLLFLFFRSLRGVLLPLLVVLLAVI 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1117 GVLLGLILTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLLTALTTILGLVPLTF 1196
Cdd:COG1033 258 WTLGLMGLLGIPLSPLTILVPPLLLAIGIDYGIHLLNRYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLF 337
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2255980393 1197 ginvdfvgllADFAPNFQFGSentqfwgpmgTAIIsGLTFATFLTLVIVPVMYSVFD 1253
Cdd:COG1033 338 ----------SDIPPIRDFGI----------VAAI-GVLLAFLTSLTLLPALLSLLP 373
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
295-501 |
2.60e-13 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 74.90 E-value: 2.60e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 295 RTAQVISLNVTKRPGANILETSDAVKSTLDAFSFPSGTEVLLTGdQSENVQSLVTDLENNIISGLIFVIAVLLFFLGV-- 372
Cdd:COG1033 548 YSAARVTVRLKDLDSEEIKALVEEVRAFLAENFPPDGVEVTLTG-SAVLFAAINESVIESQIRSLLLALLLIFLLLLLaf 626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 373 RNATLVGIAIPLSMFTSFLVFQALGYT---LNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGG 449
Cdd:COG1033 627 RSLRLGLISLIPNLLPILLTFGLMGLLgipLNIATAVVASIALGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGK 706
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2255980393 450 PVVAATATTVSAFAPMLLWPgiiGEFMSYMPLTLIITLTSSLFVALIINPVI 501
Cdd:COG1033 707 AILFTSLTLAAGFGVLLFSS---FPPLADFGLLLALGLLVALLAALLLLPAL 755
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
273-564 |
1.45e-12 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 72.20 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 273 RLRVLKRERADGETVSvpASERRTAQVISLNVTKRPGA-NILETSDAVKSTLDAFSFPsGTEVLLTGD---QSENVQSLV 348
Cdd:COG1033 141 REKVLSSPLYVGRLVS--PDGKATLIVVTLDPDPLSSDlDRKEVVAEIRAIIAKYEDP-GVEVYLTGFpvlRGDIAEAIQ 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 349 TDLEnnIISGLIFVIAVLLFFLGVRN--ATLVGIAIPL-SMFTSFLVFQALGYTLNFI--ILFSLIIALGmlVDNAVVVI 423
Cdd:COG1033 218 SDLA--IFFPLALLLILLLLFLFFRSlrGVLLPLLVVLlAVIWTLGLMGLLGIPLSPLtiLVPPLLLAIG--IDYGIHLL 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 424 ENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWP-GIIGEFmsymPLTLIITLTSSLFVALIINPVIT 502
Cdd:COG1033 294 NRYREERRKGLDKREALREALRKLGPPVLLTSLTTAIGFLSLLFSDiPPIRDF----GIVAAIGVLLAFLTSLTLLPALL 369
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2255980393 503 GFFVEVKGRSNGEKGSSRWPALARYGGVGLILLLGVTLGIAnwktLVVVATAVPALYLLHVY 564
Cdd:COG1033 370 SLLPRPKPKTRRLKKPPELGRLLAKLARFVLRRPKVILVVA----LVLAVVSLYGISRLKVE 427
|
|
| MMPL |
COG1033 |
Predicted exporter protein, RND superfamily [General function prediction only]; |
1041-1260 |
4.77e-12 |
|
Predicted exporter protein, RND superfamily [General function prediction only];
Pssm-ID: 440656 [Multi-domain] Cd Length: 767 Bit Score: 70.66 E-value: 4.77e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1041 EVLTRVQDELSEYRQglPPGYTMEYTG-------GNEDQQESfgfLTTALLIGASLILLILIVEFNSISAPFIIMVAVGL 1113
Cdd:COG1033 567 ALVEEVRAFLAENFP--PDGVEVTLTGsavlfaaINESVIES---QIRSLLLALLLIFLLLLLAFRSLRLGLISLIPNLL 641
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1114 SmIGVLLGLI-LTRTPFNLFTFIgIIALA-GIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLLTALTTILGL 1191
Cdd:COG1033 642 P-ILLTFGLMgLLGIPLNIATAV-VASIAlGIGVDYTIHFLSRYREERRKGGDLEEAIRRALRTTGKAILFTSLTLAAGF 719
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2255980393 1192 VPLTFginvdfvgllADFAPNFQFGsentqfwgpMGTAIisGLTFATFLTLVIVPVMYSVFDSVSLRLT 1260
Cdd:COG1033 720 GVLLF----------SSFPPLADFG---------LLLAL--GLLVALLAALLLLPALLLLLDPRIAKKR 767
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
1026-1252 |
6.16e-09 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 60.55 E-value: 6.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1026 VVTVSGAAAPGYNGPEVLTRVQDELSEYRqglPPGYTMEYTGG---NEDQQESF-GFLTTALLIGASLILLILIVEFNSI 1101
Cdd:COG2409 117 LVTVTLDGDAGDEAAEAVDALRDAVAAAP---APGLTVYVTGPaalAADLNEAFeEDLGRAELITLPVALVVLLLVFRSL 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1102 SAPFIIMVAVGLSMIGVLLGL-ILTR-TPFNLFT--FIGIIALAgivvnnniVLVDYIM-------QLRGRGQDKQAAIV 1170
Cdd:COG2409 194 VAALLPLLTAGLAVGVALGLLaLLAAfTDVSSFApnLLTMLGLG--------VGIDYALflvsryrEELRAGEDREEAVA 265
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1171 EGGATRLRPVLLTALTTILGLVPLtfginvdfvgLLADFaPNFQfgsentqfwgPMGTAIISGLTFATFLTLVIVPVMYS 1250
Cdd:COG2409 266 RAVATAGRAVLFSGLTVAIALLGL----------LLAGL-PFLR----------SMGPAAAIGVAVAVLAALTLLPALLA 324
|
..
gi 2255980393 1251 VF 1252
Cdd:COG2409 325 LL 326
|
|
| YdfJ |
COG2409 |
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function ... |
292-526 |
1.63e-08 |
|
Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily [General function prediction only];
Pssm-ID: 441964 [Multi-domain] Cd Length: 697 Bit Score: 59.01 E-value: 1.63e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 292 SERRTAQVISLNVTKRPGANILETSDAVKSTLDAFSfPSGTEVLLTGD---QSENVQSLVTDLENNIISGLIFVIAVLLF 368
Cdd:COG2409 110 SEDGKAALVTVTLDGDAGDEAAEAVDALRDAVAAAP-APGLTVYVTGPaalAADLNEAFEEDLGRAELITLPVALVVLLL 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 369 FLGvrnaTLVGIAIPL-----SMFTSFLVFQALGYTL---NFIILFSLIIALGMLVDNAVVVIeniYRFREQ---GYSRW 437
Cdd:COG2409 189 VFR----SLVAALLPLltaglAVGVALGLLALLAAFTdvsSFAPNLLTMLGLGVGIDYALFLV---SRYREElraGEDRE 261
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 438 ESARLGTAEVGGPVVAATATTVSAFAPMLLWPgiIGeFMSYMPLTLIITLTSSLFVALIINPVITGFF-------VEVKG 510
Cdd:COG2409 262 EAVARAVATAGRAVLFSGLTVAIALLGLLLAG--LP-FLRSMGPAAAIGVAVAVLAALTLLPALLALLgrrvfwpRRPRR 338
|
250
....*....|....*.
gi 2255980393 511 RSNGEKGSSRWPALAR 526
Cdd:COG2409 339 RRAAAPESGFWRRLAR 354
|
|
| ACR_tran |
pfam00873 |
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are ... |
2-501 |
8.59e-08 |
|
AcrB/AcrD/AcrF family; Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.
Pssm-ID: 395701 [Multi-domain] Cd Length: 1021 Bit Score: 56.92 E-value: 8.59e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 2 KITNLSIKYRTAIAVFTLILAVGGLASYLTIPKESNPSIEFPQIVVTSVYPGASPSDVESTVSQVIEQEIS--------- 72
Cdd:pfam00873 518 KLLAKVLRHTAVVLLVALLLVVGSVWLFVRIPTEFLPEEDEGVFVTSAQLPPGVSLDQTQRVMKQVEKILKekpevesvf 597
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 73 SINGIDEMRSTSSEGVSTIVVEFTPDVNTDKAYQEVNRAVDRAQ---PDLPGAVEEPLvdeintdQFPIMTVNLSGTYSL 149
Cdd:pfam00873 598 AVTGFAFSGDNNGPNSGDAFISLKPWKERPGPEKSVQALIERLRkalKQIPGANVFLF-------QPIQLRGLGTISGFR 670
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 150 ARLK-TVAEDLQDDLEGISSVL--EANLIGGLTR----------EVQVNVDLAALKNYNVSynslVNTIQQENTNIPGGS 216
Cdd:pfam00873 671 SDLQvKIFGDDLDALDEARNQIlaALAQLPGLSDvrsdgqedqpQLQVNIDREKAARLGVS----IQDINDTLSTALGGS 746
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 217 I------DVNRLNYLVRVDGQFDQPAQQIEELVVkTTANGRTVQVKDVAdvifgfKDRTSYSRLRVlkrERADGETVSVp 290
Cdd:pfam00873 747 YvndfpeGGRVYDVVVQLPEDFRSSPEDIGQLYV-RNPYGKMIPLSAFA------KIEWGYGPPSI---NRYNGFRSIV- 815
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 291 aserrtaqvISLNVtkRPGANILETSDAVKSTLDAFSFPSGTEVLLTGdQSENVQSLVTDLEnnIISGL-IFVIAVLLFF 369
Cdd:pfam00873 816 ---------ISGNV--AAGDSLGDAMEAMAQIAKQVKLPPGYGYTWTG-QFEQEQLAGNSLP--ILIALaLLVVFLVLAA 881
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 370 L--GVRNATLVGIAIPLSMFTSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQ-GYSRWESARLGTAE 446
Cdd:pfam00873 882 LyeSWSDPLSIMLTVPLALVGALLALWLRGLPNSVYAQVGLILLIGLAVKNAILMVEFANELREQeGKSLEEAILEACRL 961
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2255980393 447 VGGPVVAATATTVSAFAPMLLWPGIIGEFMSYMPLTLIITLTSSLFVALIINPVI 501
Cdd:pfam00873 962 RLRPILMTALAAILGVLPLALSTGAGSELQQPLGIVVFGGLVTSTVLTLLVVPVF 1016
|
|
| MMPL |
pfam03176 |
MMPL family; Members of this family are putative integral membrane proteins from bacteria. ... |
928-1246 |
1.72e-07 |
|
MMPL family; Members of this family are putative integral membrane proteins from bacteria. Several of the members are mycobacterial proteins. Many of the proteins contain two copies of this aligned region. The function of these proteins is not known, although it has been suggested that they may be involved in lipid transport.
Pssm-ID: 308676 [Multi-domain] Cd Length: 332 Bit Score: 54.61 E-value: 1.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 928 EVQVDVDRAQAAEYGLSTSQIAQTVRTAiqGTEADTYRSGEDEYDITVRLQKQDRKSIESLGSLtVTNPRGQqiPLTSVA 1007
Cdd:pfam03176 8 PSVRAMDRLGAAFPQADSDPIIVVVLGE--GDQALGDAAAEAGYDTLVDALRADTGHVGSVQDF-WGDPDTA--ALFVSP 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1008 DieegtgfGSITRidqnrvVTVSGAAAPGYN-GPEVLTRVQDELSEYRQglPPGYTMEYTGG---NEDQQESFGF-LTTA 1082
Cdd:pfam03176 83 D-------GKAAY------VVVTLEGDPGTTeADESVAAVRDAVEQAPP--PEGLKAYLTGPaatVADLRDAGDRdLGLI 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1083 LLIGASLILLILIVEFNSISAPFIIMVAVGLSMiGVLLGLILtrtpfnLFTFIGIIALAGIVVNNNIVLV-----DYIMQ 1157
Cdd:pfam03176 148 EAVTLVVIFIILLIVYRSVVAALLPLLTVGLSL-GAAQGLVA------ILAHILGIGLSTFALNLLVVLLiavgtDYALF 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1158 L-------RGRGQDKQAAIVEGGATRLRPVLLTALTTILGLVPLTFginvdfvgllADFaPNFQfgsentqfwgPMGTAI 1230
Cdd:pfam03176 221 LvsryreeLRAGEDREEAVIRAVRGTGKVVTAAGLTVAIAMLALSF----------ARL-PVFA----------QVGPTI 279
|
330
....*....|....*.
gi 2255980393 1231 ISGLTFATFLTLVIVP 1246
Cdd:pfam03176 280 AIGVLVDVLAALTLLP 295
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
1054-1253 |
5.13e-06 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 50.99 E-value: 5.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1054 RQGLPPGYTMEYTGG---NEDQQESFGF-LTTALLIGASLILLILIVEFNSISAPFIIMVAVgLSMIGVLLGLI-LTRTP 1128
Cdd:TIGR00921 166 RTNPPSGKFLDVTGSpaiNYDIEREFGKdMGTTMAISGILVVLVLLLDFKRWWRPLLPLVII-LFGVAWVLGIMgWLGIP 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1129 FNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQAAIVEGGATRLRPVLLTALTTILGlvpltfginvdFVGLLAD 1208
Cdd:TIGR00921 245 LYATTLLAVPMLIGVGIDYGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAG-----------FAALALS 313
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 2255980393 1209 FAPNFQfgsentQFwgpmGTAIISGLTFATFLTLVIVPVMYSVFD 1253
Cdd:TIGR00921 314 EFPMVS------EF----GLGLVAGLITAYLLTLLVLPALLQSID 348
|
|
| actII |
TIGR00833 |
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family ... |
313-557 |
1.33e-05 |
|
Transport protein; The Resistance-Nodulation-Cell Division (RND) Superfamily- MmpL sub family (TC 2.A.6.5)Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. This sub-family includes the S. coelicolor ActII3 protein, which may play a role in drug resistance, and the M. tuberculosis MmpL7 protein, which catalyzes export of an outer membrane lipid, phthiocerol dimycocerosate. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 129913 [Multi-domain] Cd Length: 910 Bit Score: 49.58 E-value: 1.33e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 313 LETSDAVKSTLDAFSFPSGTEVLLTG------DQSENVQSLVTDLEnnIISGLIFVIAVLLFFLGVRNATLVGIAIPLSM 386
Cdd:TIGR00833 134 QEAINAVRRIVEQTNAPDGLTVHVTGplatiaDILESGDKDMNRIT--ATTGIIVLIILLLVYRSPITMLVPLVSVGFSV 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 387 FTSFLVFQALGYTLN-----FIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSA 461
Cdd:TIGR00833 212 VVAQGIVSLLGIPGLigvnaQTTVLLTALVIGAGTDYAVFLTGRYHEERRKGESLEEAAAEALRGTGKAILGSALTVAVA 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 462 FAPMLLwpGIIGEFMSYMPLtLIITLTSSLFVALIINP---VITGFFV--EVKGRSNGEKGSSR---------WPALARY 527
Cdd:TIGR00833 292 FLALSL--ARLPSFKTLGVS-CAVGVLVALLNAVTLTPallTLEGREGlmKPGRKSKIRFIWRRlgtavvrrpWPILVTT 368
|
250 260 270
....*....|....*....|....*....|
gi 2255980393 528 GGVGLILLLGVTLGIANWKTLVVVATAVPA 557
Cdd:TIGR00833 369 LIISGVSLLALPLIRTGYDDEKMIPTDLES 398
|
|
| PRK12911 |
PRK12911 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
359-505 |
3.48e-05 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 171815 [Multi-domain] Cd Length: 1403 Bit Score: 48.32 E-value: 3.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 359 LIFVIAVLLFFLGVrnatLVGIAIPLSMFTSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIEniyRFREQ---GYS 435
Cdd:PRK12911 922 LIVLMSVYYRFGGV----IASGAVLLNLLLIWAALQYLDAPLTLSGLAGIVLAMGMAVDANVLVFE---RIREEyllSRS 994
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2255980393 436 RWESARLGTAEVGGPVVAATATTVSAFAPML-LWPGIIGEFmsymPLTLIITLTSSLFVALIinpvITGFF 505
Cdd:PRK12911 995 LSESVEAGYKKAFSAIFDSNLTTILASALLLmLDTGPIKGF----ALTLIIGIFSSMFTALF----MTKFF 1057
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
319-519 |
4.61e-05 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 47.91 E-value: 4.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 319 VKSTLDAFSFPSGTEVLLTGDQSENVQ-------SLVTDLennIISGLIFVIAVLLFFLGVRnATLVGIAIPLSMFTSFL 391
Cdd:TIGR00921 160 VERSLERTNPPSGKFLDVTGSPAINYDierefgkDMGTTM---AISGILVVLVLLLDFKRWW-RPLLPLVIILFGVAWVL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 392 VFQA-LGYTLNFIILFSLIIALGMLVDNAVVVIENIYRFREQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLwPG 470
Cdd:TIGR00921 236 GIMGwLGIPLYATTLLAVPMLIGVGIDYGIQTLNRYEEERDIGRAKGEAIVTAVRRTGRAVLIALLTTSAGFAALAL-SE 314
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2255980393 471 I--IGEFMSYMPLTLIITLTSSLFVALIINPVITGFFVEVKGRSNGEKGSS 519
Cdd:TIGR00921 315 FpmVSEFGLGLVAGLITAYLLTLLVLPALLQSIDIGREKVKKEIIAIGGKS 365
|
|
| secD |
TIGR01129 |
protein-export membrane protein SecD; Members of this family are highly variable in length ... |
351-497 |
5.62e-05 |
|
protein-export membrane protein SecD; Members of this family are highly variable in length immediately after the well-conserved motif LGLGLXGG at the amino-terminal end of this model. Archaeal homologs are not included in the seed and score between the trusted and noise cutoffs. SecD from Mycobacterium tuberculosis has a long Pro-rich insert. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273456 [Multi-domain] Cd Length: 397 Bit Score: 47.28 E-value: 5.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 351 LENNIISGLIFVIAVLLF-FLGVRNATLVG-IAIPLSMFTSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIENIYR 428
Cdd:TIGR01129 247 IEAGIKAGLIGLVLVLVFmILYYRLFGLIAaIALVINIVLILAILSAFGATLTLPGIAGLILTIGMAVDANVLIYERIKE 326
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 429 FREQGYSRWESARLGTAEVGGPVVAATATT-VSAFAPMLLWPGIIGEFmsymPLTLIITLTSSLFVALII 497
Cdd:TIGR01129 327 ELRLGKSVRQAIEAGFERAFSTIFDANITTlIAALILYVFGTGPVKGF----AVTLAIGIIASLFTALVF 392
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
1079-1196 |
6.96e-05 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 47.15 E-value: 6.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1079 LTTALLIGASLILLILIVEFNSISAPFIIMVAVGLSMIGVLLGLILTRTPFNLFTFIGIIALAGIVvnnnivlVDYIMQL 1158
Cdd:COG4258 641 ALWLLLLALLLILLLLLLRLRSLRRALRVLLPPLLAVLLTLAILGLLGIPLNLFHLIALLLVLGIG-------IDYALFF 713
|
90 100 110
....*....|....*....|....*....|....*...
gi 2255980393 1159 RGRGQDKQAAiveggATRLRPVLLTALTTILGLVPLTF 1196
Cdd:COG4258 714 TEGLLDKGEL-----ARTLLSILLAALTTLLGFGLLAF 746
|
|
| PRK13024 |
PRK13024 |
bifunctional preprotein translocase subunit SecD/SecF; Reviewed |
355-507 |
7.78e-05 |
|
bifunctional preprotein translocase subunit SecD/SecF; Reviewed
Pssm-ID: 237276 [Multi-domain] Cd Length: 755 Bit Score: 47.15 E-value: 7.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 355 IISGLIFVIAVLLFFLGVRNatLVG----IAIPLSMFTSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIEniyRFR 430
Cdd:PRK13024 269 IIAGIIGFALIFLFMLVYYG--LPGlianIALLLYIFLTLGALSSLGAVLTLPGIAGLVLGIGMAVDANVLIFE---RIK 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 431 E-------------QGYSRWESArlgtaevggpVVAATATTVSAfAPMLLWPGI--IGEFmsymPLTLIITLTSSLFVAL 495
Cdd:PRK13024 344 EelrkgkslkkafkKGFKNAFST----------ILDSNITTLIA-AAILFFFGTgpVKGF----ATTLIIGILASLFTAV 408
|
170
....*....|..
gi 2255980393 496 IINPVITGFFVE 507
Cdd:PRK13024 409 FLTRLLLELLVK 420
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
308-462 |
8.56e-05 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 46.91 E-value: 8.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 308 PGAnilETSDAVKSTLDAFSFP--SGTEVLLTGDQSENVQSLVTDLENNIISGLI-FVIAVLLFFLGVRN-----ATLVG 379
Cdd:TIGR03480 226 PAE---KAINAIRAAAKDLRLDedHGVTVRLTGEVALSDEELATVSEGATVAGLLsFVLVLVLLWLALRSprlvfAVLVT 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 380 IAIPLSMFTSFLVFqALGyTLN-----FIILFsliiaLGMLVDNAvvvIENIYRFREQ---GYSRWESARLGTAEVGGPV 451
Cdd:TIGR03480 303 LIVGLILTAAFATL-AVG-HLNlisvaFAVLF-----IGLGVDFA---IQFSLRYREErfrGGNHREALSVAARRMGAAL 372
|
170
....*....|.
gi 2255980393 452 VAATATTVSAF 462
Cdd:TIGR03480 373 LLAALATAAGF 383
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
312-501 |
2.57e-04 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 45.60 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 312 ILETSDAVKSTLDAFSFPSGTEVLLTGDQ---SENVQSLVTDLENNIISGLIFVIAVLL-FFLGVRNATLVGIAIPLSMF 387
Cdd:TIGR00921 527 PKVQGRKILRDVQHEHPPPGVKVGVTGLPvafAEMHELVNEGMRRMTIAGAILVLMILLaVFRNPIKAVFPLIAIGSGIL 606
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 388 TSFLVFQALG--YTLNFIILFSLIIALGMlvDNAVVVIEniyRFREQ--GYSRWESARLGTAEVGGPVVAATATTVSAFA 463
Cdd:TIGR00921 607 WAIGLMGLRGipSFLAMATTISIILGLGM--DYSIHLAE---RYFEErkEHGPKEAITHTMERTGPGILFSGLTTAGGFL 681
|
170 180 190
....*....|....*....|....*....|....*...
gi 2255980393 464 PMLLWPGIIgefMSYMPLTLIITLTSSLFVALIINPVI 501
Cdd:TIGR00921 682 SLLLSHFPI---MRNFGLVQGIGVLSSLTAALVVFPAL 716
|
|
| COG4258 |
COG4258 |
Predicted exporter [General function prediction only]; |
1033-1249 |
3.74e-04 |
|
Predicted exporter [General function prediction only];
Pssm-ID: 443400 [Multi-domain] Cd Length: 783 Bit Score: 44.84 E-value: 3.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1033 AAPGY--NGPEVLTRVQDELSEYRQGLPPGYTMEYTGG------NEDQ--QESfgflTTALLIGASLILLILIVEFNSIS 1102
Cdd:COG4258 199 RASGFdtDAQQQLVAALRAAFAALNAAFPGAQLLLTGAglfavaAAQQikHDI----STIGLISLLGILLLLLLVFRSLR 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1103 APFIIMVAVGlsmIGVLLGLILTRTpfnLFTFIGIIALA-GIVVnnnI-VLVDY----IMQLRGRGQDKQAAIVEggatR 1176
Cdd:COG4258 275 PLLLGLLPVA---VGALAGLAAVSL---VFGSVHGITLGfGSSL---IgVAVDYslhyLTHRRAAGEWDPRAALR----R 341
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2255980393 1177 LRPVLLTA-LTTILGLVPLTFginVDFVGL--LADFApnfqfgsentqfwgpmgtaiISGLTFATFLTLVIVPVMY 1249
Cdd:COG4258 342 IWPTLLLGlLTTVLGYLALLF---SPFPGLrqLGVFA--------------------AAGLLAAALTTLLWLPLLL 394
|
|
| 2A0604s01 |
TIGR00916 |
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY ... |
355-495 |
1.38e-03 |
|
protein-export membrane protein, SecD/SecF family; The SecA,SecB,SecD,SecE,SecF,SecG and SecY proteins form the protein translocation appartus in prokaryotes. This family is specific for the SecD and SecF proteins. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273336 [Multi-domain] Cd Length: 192 Bit Score: 41.47 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 355 IISGLIFVIAVLLFfLGVRNATLVGIAIPLSM----FTSFLVFQALGYTLNFIILFSLIIALGMLVDNAVVVIEniyRFR 430
Cdd:TIGR00916 50 IIALLIGLVLVLLY-MLLRYEWRGAIAAIAALvhdvILILGVLSLFGATLTLPGIAGLLTIIGYSVDDTVVIFD---RIR 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2255980393 431 EQ-----GYSRWESARLGTAEVGGPVVAATATT-VSAFAPMLLWPGIIGEFMsympLTLIITLTSSLFVAL 495
Cdd:TIGR00916 126 EElrkykGRTFREAINLGINQTLSRIIDTNVTTlLAVLALYVFGGGAIKGFA----LTLGIGVIAGTYSSI 192
|
|
| 2A067 |
TIGR00921 |
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized ... |
1054-1251 |
3.80e-03 |
|
The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family; Characterized members of the RND superfamily all probably catalyze substrate efflux via an H+ antiport mechanism. These proteins are found ubiquitously in bacteria, archaea and eukaryotes. They fall into seven phylogenetic families, this family (2.A.6.7) consists of uncharacterised putative transporters, largely in the Archaea. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273340 [Multi-domain] Cd Length: 719 Bit Score: 41.75 E-value: 3.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1054 RQGLPPGYTMEYTGG-----------NEDQqesfgflTTALLIGASLILLILIVEFNSIS---APFIIMVAVGLSMIGVL 1119
Cdd:TIGR00921 540 HEHPPPGVKVGVTGLpvafaemhelvNEGM-------RRMTIAGAILVLMILLAVFRNPIkavFPLIAIGSGILWAIGLM 612
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1120 LgliLTRTPFNLFTFIGIIALAGIVVNNNIVLVDYIMQLRGRGQDKQaAIVEGGATRLRPVLLTALTTILGlvpltfgin 1199
Cdd:TIGR00921 613 G---LRGIPSFLAMATTISIILGLGMDYSIHLAERYFEERKEHGPKE-AITHTMERTGPGILFSGLTTAGG--------- 679
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2255980393 1200 vdFVGLLADFAPNFQfgsentqfwgPMGTAIISGLTFATFLTLVIVPVMYSV 1251
Cdd:TIGR00921 680 --FLSLLLSHFPIMR----------NFGLVQGIGVLSSLTAALVVFPALLVL 719
|
|
| Patched |
pfam02460 |
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic ... |
339-506 |
4.25e-03 |
|
Patched family; The transmembrane protein Patched is a receptor for the morphogene Sonic Hedgehog. This protein associates with the smoothened protein to transduce hedgehog signals.
Pssm-ID: 308203 [Multi-domain] Cd Length: 793 Bit Score: 41.57 E-value: 4.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 339 DQSENVQSlvtDLENNIISGLIFVIAVLLFFLGVRNATLVgiaIPLSMFT-SFLVFQAL---GYTLNFIILFSLIIALGM 414
Cdd:pfam02460 632 DQYLTILP---STIQNIVITLICMFIVCFLFIPNPPCVFV---ITLAIASiDIGVFGFLslwGVDLDPISMITIIMSIGF 705
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 415 LVDNAVVVIENIYRfrEQGYSRWESARLGTAEVGGPVVAATATTVSAFAPMLLWPgiigefmSYMPL----TLIITLTSS 490
Cdd:pfam02460 706 SVDFSAHIAYHFVR--SRGDTPAERVVDALEALGWPVFQGGLSTILGVLVLLFVP-------SYMVVvffkTVFLVVAIG 776
|
170
....*....|....*.
gi 2255980393 491 LFVALIINPVITGFFV 506
Cdd:pfam02460 777 LLHGLFILPIILSLFV 792
|
|
| HpnN |
TIGR03480 |
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing ... |
363-503 |
4.27e-03 |
|
hopanoid biosynthesis associated RND transporter like protein HpnN; The genomes containing members of this family share the machinery for the biosynthesis of hopanoid lipids. Furthermore, the genes of this family are usually located proximal to other components of this biological process. The proteins appear to be related to the RND family of export proteins, particularly the hydrophobe/amphiphile efflux-3 (HAE3) family represented by TIGR00921.
Pssm-ID: 274598 [Multi-domain] Cd Length: 862 Bit Score: 41.52 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 363 IAVLLFFL--GVRNATLVGIAIPLSMFTSFLVFQALGYTLNF--IILFSLIIALGmlVDNAVVVIEniyrfreqgysRWE 438
Cdd:TIGR03480 725 ITVLLLLTlrRVRDVLLVLAPLLLAGLLTVAAMVLLGIPFNFanIIALPLLLGLG--VDFGIYMVH-----------RWR 791
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2255980393 439 SARLGTAEVGGP----VVAATATTVSAFAPMLL--WPGiigefMSYMPLTLIITLTSSLFVALIINPVITG 503
Cdd:TIGR03480 792 NGVDSGNLLQSStaraVFFSALTTATAFGSLAVssHPG-----TASMGILLSLGLGLTLLCTLIFLPALLG 857
|
|
| secD |
PRK08343 |
preprotein translocase subunit SecD; Reviewed |
1078-1210 |
8.40e-03 |
|
preprotein translocase subunit SecD; Reviewed
Pssm-ID: 236245 [Multi-domain] Cd Length: 417 Bit Score: 40.24 E-value: 8.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1078 FLTTALLIGASLILLILIVEFNSISAPFII--MVAVGLSMIGVLLGLI-LTRTPFNLFTFIGIIALAGIVVNNNIVLVDY 1154
Cdd:PRK08343 259 FKKGSLIAGLLALLAVALVVFLRYREPRIAlpMVITSLSEVIIILGFAaLIGWQLDLASIAGIIAVIGTGVDDLIIITDE 338
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2255980393 1155 IMQlrgRGQDKQAAIVEggaTRLRP----VLLTALTTILGLVPLTfginVDFVGLLADFA 1210
Cdd:PRK08343 339 VLH---EGKVPSRKVFL---SRIKRaffiIFAAAATTIAAMSPLA----VMGLGDLKGFA 388
|
|
| |
