MULTISPECIES: small membrane protein [Klebsiella]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| KPN_two_small super family | cl41475 | small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 ... |
2-31 | 8.36e-06 | ||
small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 from Klebsiella pneumoniae subsp. pneumoniae MGH 78578, are small proteins, typically 40 amino acids in length. A highly hydrophobic region, about 25 amino acids in length with a composition typical of transmembrane segments, is followed by a highly basic region of about 15 amino acids. Analogous proteins of similar size, with apparently similar hydrophobic regions, have been described as membrane-associated proteins expressed in response to various types of cell envelope stress. The actual alignment was detected with superfamily member NF033853: Pssm-ID: 411421 Cd Length: 37 Bit Score: 36.78 E-value: 8.36e-06
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| Name | Accession | Description | Interval | E-value | ||
| KPN_two_small | NF033853 | small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 ... |
2-31 | 8.36e-06 | ||
small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 from Klebsiella pneumoniae subsp. pneumoniae MGH 78578, are small proteins, typically 40 amino acids in length. A highly hydrophobic region, about 25 amino acids in length with a composition typical of transmembrane segments, is followed by a highly basic region of about 15 amino acids. Analogous proteins of similar size, with apparently similar hydrophobic regions, have been described as membrane-associated proteins expressed in response to various types of cell envelope stress. Pssm-ID: 411421 Cd Length: 37 Bit Score: 36.78 E-value: 8.36e-06
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| Name | Accession | Description | Interval | E-value | ||
| KPN_two_small | NF033853 | small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 ... |
2-31 | 8.36e-06 | ||
small membrane protein; Members of this family, including paralogs KPN_01023 and KPN_01923 from Klebsiella pneumoniae subsp. pneumoniae MGH 78578, are small proteins, typically 40 amino acids in length. A highly hydrophobic region, about 25 amino acids in length with a composition typical of transmembrane segments, is followed by a highly basic region of about 15 amino acids. Analogous proteins of similar size, with apparently similar hydrophobic regions, have been described as membrane-associated proteins expressed in response to various types of cell envelope stress. Pssm-ID: 411421 Cd Length: 37 Bit Score: 36.78 E-value: 8.36e-06
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| Blast search parameters | ||||
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