|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-685 |
7.63e-93 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 301.75 E-value: 7.63e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 31 DEMVITASRSNIQQQKAPQVVTVITKEQIEQQMqvTSDSSQILsNLLPSFSPSRQKMSGSGETFRG-----RAALVMIDG 105
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQP--ATDLGDLL-RRVPGVSVTSAGGGAGQISIRGfggggNRVLVLVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 106 IPQSNPLRPTGReMHTIDFSMVERVEVIHGANAT-NGMGATGGVINIITRRPENGsfnQHVNVQTTLptekirGETASYK 184
Cdd:COG1629 79 VPLNDPSGGDGG-LSYIDPEDIERVEVLRGPSSAlYGSGALGGVINIVTKKPKDG---KGGEVSASY------GSYGTYR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 185 TTYRVDGREDYLDYLFSIGYENQGLYLDGNnrpvgvdntqgdtmDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY 264
Cdd:COG1629 149 ASLSLSGGNGKLAYRLSASYRDSDGYRDNS--------------DSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPG 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 265 LSVDGIRSQGLPTTSVRGTPRGEAPHNSIWTTGFTYE-NHDLAGMKLSALLFNQRYealfgATNSSTFQDPAIAPRGSLY 343
Cdd:COG1629 215 YLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEyEHLGDGLKLSASAYYRYD-----DTDLDSDFTPTPADGGTLE 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 344 DQSRSvANKYGTKLALTKDDLLDDTLKITVGFDTLYDKGKQDLYLT----------QRTYVPETEYTNYSPFIQGEYQLL 413
Cdd:COG1629 290 QTDFD-NRTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLdlgsgslptlTSGADDDGTTTSLALYAQDTYKLT 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 414 DNVTLHAGIRHEIAKLKVGDYqtlasNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRaLRTIKR 493
Cdd:COG1629 369 DKLTLTAGLRYDYVSYDVDDT-----VTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGE-LYANGT 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 494 SGVSLKNFDgFKPIVTDNVETGFRFKR--DKFDFEASYYESKSK-----LGENVTESGGVFLSERQRTQIRGVEVTAGYQ 566
Cdd:COG1629 443 DPYSVGNPD-LKPETSTNYELGLRYRLldGRLSLSLALFYSDVDneilsVPLPNDSGFSTYYTNAGKARSYGVELELSYQ 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 567 INEQHKVNASYAHSEGKYDDNKDGKVDTKFNGL-NIAPDRVIASWSANWNDQWSSFVQANYAFSRSFDDAGLAF--DGYL 643
Cdd:COG1629 522 LTPGLSLNASYSYTDAKFDDDTDGSADLDGNRLpGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGapGGYT 601
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 2316062834 644 LMDAAVGYKLPYG-RLNVAVANLLDKQYITYYSQAGLNNNTRY 685
Cdd:COG1629 602 LVDLGAGYRFGDNlTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
50-701 |
8.73e-69 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 237.35 E-value: 8.73e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 50 VVTVITKEQIEQQMQVTSDssqILSNLLPSFSPSRQ-KMSGSGETFRGRAA---LVMIDGIPQSNPLRPTGREMHTIDFS 125
Cdd:cd01347 1 SVSVITAEDIEKQPATSLA---DLLRRIPGVSVTRGgGGGGSTISIRGFGPdrtLVLVDGLPLASSNYGRGVDLNTIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 126 MVERVEVIHGANAT-NGMGATGGVINIITRRPengsfnqhvnvqttlpTEKIRGE-TASYKTTYRVDGREDYLDYLFSIG 203
Cdd:cd01347 78 LIERVEVLKGPSSAlYGSGAIGGVVNIITKRP----------------TDEFGGSvTAGYGSDNSGSSGGGGFDVSGALA 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 204 YENQGLY-LDGNNRP---VGVDNTQGDTMDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY--LSVDGIRSQGLPT 277
Cdd:cd01347 142 DDGAFGArLYGAYRDgdgTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGgtLPANGTGSSLGGG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 278 TSVRGTPRGEAPHNSIWTTGFTYE---NHDLAGMKLSALLFNQRYEALFGATNSSTFQDPAIAPRGSLYDQSRSVANKYG 354
Cdd:cd01347 222 PSSNTNGDRDWDYRDRYRKRASLGlehDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLG 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 355 TKLALTKD-DLLDDTLKITVGFDTLYDKGKQDlyltqrtyvpeteytNYSPFIQGEYQLLDNVTLHAGIRHEiaklkvgD 433
Cdd:cd01347 302 FDAGLNAPfGTGPVAHTLTLGVEYRREELDEK---------------QTALYAQDTIELTDDLTLTLGLRYD-------H 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 434 YQTLASNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRALRTIKRSGVSLKNFDGFKPIVTDNVE 513
Cdd:cd01347 360 YDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGNPNLKPEKSKQYE 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 514 TGFRFKRDK-FDFEASYYESKSK-----LGENVTESGGVFLSERQRTQIRGVEVTAGYQINEQHKVNASYAHSEGKYDDN 587
Cdd:cd01347 440 LGLKYDPGDgLTLSAALFRIDIKneivsTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 588 KDGKVDTKFngLNIAPDRVIASWSANWN-DQWSSFVQANYAFSRSFDDAGLA----FDGYLLMDAAVGYKLPYG-RLNVA 661
Cdd:cd01347 520 DGATTGNRL--PGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTANGNntvkVPGYTLVDLSASYQFTKNlTLRLG 597
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2316062834 662 VANLLDKQYITYYSQAGlnNNTRYFSGRGRTVTLGYSIDF 701
Cdd:cd01347 598 VNNLFDKDYYTSLSVRG--SGLYGYYGPGRTYYLSVSYKF 635
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
46-701 |
5.61e-46 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 173.75 E-value: 5.61e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 46 KAPQVVTVITKEQIEQQmQVTsDSSQILSNLLPSFSPSRQ-KMSGSGETFRGRAALVMIDGIPqSNPLRPTGREMHTI-D 123
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQ-QAG-SLSEALQRVPGVVVGGSGgTTQFGNITIRGFGLEVDIDNVY-LDGVPLLSRGNLAIvD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 124 FSMVERVEVIHGANAT-NGMGATGGVINIITRRPEN---GSFNQHVnvqttlptekirGETASYKTTYRVDGR---EDYL 196
Cdd:TIGR01783 78 PAMVERVEVLRGPASLlYGGSAPGGVINIVTKRPQDepkGSVTFGA------------GTRSGYRTAFDLGGPlgaDGTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 197 DYLFSIGYENQGLYLDGNnrpvgvdntqgdtmDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNYLSV---DGIRSQ 273
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGA--------------GEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLpasGGTSGR 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 274 GLPTTSVRGTPRgeaphnsiWTTGFTYEnhDLAGMKLSALLFNQRYEALFGATnSSTFQDPAIAPRGSLYDQSRSVANky 353
Cdd:TIGR01783 212 DLSSDRYLGTSS--------NRNYDDRE--YLSYGLSLEYQFNDVWTGKQNLR-YSYFDTDSNQVQASGYSSDGGLFG-- 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 354 gtkLALTKDDLLDDTLKITVGFDTLYDKG--KQDLYLTQR-----------TYVPETEYTNYSPFIQGEYQ--------- 411
Cdd:TIGR01783 279 ---RSLTVVNVKQDRVQIDAGLDGEFETGpiEHDLLLGVSygqrttnrfnnTGYPSDNIYSLTATSSARTDigdspkdra 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 412 -----------------LLDNVTLHAGIRHEIAKLKvgdyqtlaSNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFAN 474
Cdd:TIGR01783 356 lssttkalngvalqrilLADKWTLTLGGRYDSVDVK--------SNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYAS 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 475 YSEGFGMPdvGRALRTIKRSGvslknfDGFKPIVTDNVETGFRFKR-DKFDFEASYYESKSKLGENVTESGGVFLSERQR 553
Cdd:TIGR01783 428 YAESFKPG--GYYPKGAGNSG------DILEPEKGKNYELGVRYDLgDSLLATAALFRITKDNQLVQDPVNGTFSVNAGK 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 554 TQIRGVEVTAGYQINEQHKVNASYAHSEGKYddNKDGKVDTKFNGLNIAPD---RVIASWSA-NWNDQWSSFVQANYAFS 629
Cdd:TIGR01783 500 TRNRGVELEARGYLTPGLSLSAGYTYTDAEF--TEDTNGDTQGNTVPFVPKhtaSLWASYAPpVGDNGLTLGGGVQYTGK 577
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2316062834 630 RSFDDAG-LAFDGYLLMDAAVGYKLPY---GRLNVAVANLLDKQYITYYSQAGLNNNTRYfsGRGRTVTLGYSIDF 701
Cdd:TIGR01783 578 AYVDGGNtGKVPSYTVVDLSVRYDLTKkknLTLALNVNNLFDRDYYTSGYRWGPSAYIYP--GAPRTVGLSVSYDF 651
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
260-700 |
1.12e-34 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 137.98 E-value: 1.12e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 260 NENNYLSVDGIRSQGLPTTSVRGTPRGEAPHNSIWTTGFTYENHDLAGMKLSaLLFNQRYEALFGATNSSTFQDPAIAP- 338
Cdd:pfam00593 29 DLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST-LRLGLRYSSLDGDYTSNSSGLSGAGDy 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 339 -RGSLYDQSRSVANKYGTKLALTKDDLL-DDTLKITVGFDTLYDKGKQ--DLYLTQRTYVPETEYTNYSPFIQGEYQLLD 414
Cdd:pfam00593 108 lSDDRLYGLYGLDGDLELSLDLSHDLLLgVELRTAGLDYRRLDDDAYDpyDPANPSSSSYSDTTTDSYGLYLQDNIKLTD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 415 NVTLHAGIRHEiaklkvgDYQTLASNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRALRTIKRS 494
Cdd:pfam00593 188 RLTLTLGLRYD-------HYSTDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 495 GVSLKNF--DGFKPIVTDNVETGFRFKRDKFDFEASYYESKSK-----LGENVTESGGVFLSER-QRTQIRGVEVTAGYQ 566
Cdd:pfam00593 261 GGGAVAGgnPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKnlitsDPDGPGLGGTVYTYTNvGKARIRGVELELSGR 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 567 INEQHKVNASYAHsegkYDDNKDGKVDTKFNGLNIAPDRViASWSANWNDQ---WSSFVQANYAFSRSF----DDAGLAF 639
Cdd:pfam00593 341 LWGLGLSGGGYTY----TDADDDADADDTGNPLPNVPRHT-ANLGLTYDFPlggWGARLGARYVGSGERrygdAANTFKT 415
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2316062834 640 DGYLLMDAAVGYKLPYG-RLNVAVANLLDKQYITYYSQAGlnNNTRYFSGRGRTVTLGYSID 700
Cdd:pfam00593 416 PGYTLVDLSAGYRLNKNlTLRLGVNNLFDKYYKRYYSSGG--GNLGGYPGPGRTFYLGLSYK 475
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
3-688 |
1.39e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 80.59 E-value: 1.39e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 3 TLLALMPCVLIAPAYAQDDTTKKDEAsgdeMVITASRSNIQQQKAPQVVTVITKEQIEQQM--QVTsDSSQILSNLLPSF 80
Cdd:PRK13483 10 SALCLLPAVFVTHALAQAAPDKTMET----VVVTASGYEQQIRDAPASISVITREDLENRFyrDLT-DALLDVPGVVVTG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 81 SPSRQKMSgsgetFRGRAA---LVMIDGIPQSN-PLRP----TGREMH-TIDFSMVERVEVIHGANAT-NGMGATGGVIN 150
Cdd:PRK13483 85 GGDRTDIS-----LRGMGSqytLILVDGKRQSSrETRPnsdgPGVEQAwTPPLAAIERIEVIRGPMSSlYGSDAIGGVIN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 151 IITRR-PENGSFNqhVNVQTTLPTEKIRGEtaSYKTTYRVDGredyldylfSIGYENQGLYLDGNNRPVGVDNTQGDTMD 229
Cdd:PRK13483 160 IITRKvPNEWQGE--VRLDTTLQENSDSGN--VYQANFFVNG---------PLIKDLLGLQLYGQYTQREEDDIEGGYRD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 230 SRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY-LSVDGIRSQglPTTSVRGTPrgEAPHNsiwttgfTYENHDLagm 308
Cdd:PRK13483 227 KDARSLTAKLALTPNEDHDIMLEVGTSNQERDSTVgKTVAPLAPG--ESCGRRGCP--ESSTT-------EYERSTV--- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 309 klsALLFNQRYeaLFGATNSstfqdpaiaprgslYDQSRSVANKygTKLALTKDDLLDDTLKITVGFDTLYDKG----KQ 384
Cdd:PRK13483 293 ---SLSHTGRW--DFGTSDT--------------YIQHEEFDNK--SREMKIKNTDFQSSLVAPLGQEHTLTFGaaynHQ 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 385 DL------YLTQRTYVpetEYTNYSPFIQGEYQLLDNVTLHAGIR--HEiaklkvgdyqtlaSNNGVTVqggSPKfnetL 456
Cdd:PRK13483 352 DLtdetsnQISDLTDI---SRTQWAVFSEDEWRIADDFALTGGLRldHD-------------ENFGGHV---SPR----V 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 457 YNagiIYAATDSLSLFANYSEGFGMPDvgraLRTI-------KRSGVSLKNFDgFKPIVTDNVETGFRFKRDKfDFEAS- 528
Cdd:PRK13483 409 YG---VWNLAPSWTVKGGVSTGFRAPS----LRQTtpdwgqvSRGGNIYGNPD-LKPETSLNKELGLYYDLGS-GLTASl 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 529 ---YYESKSKL------------GENVTESGGVFLSERQRTQIRGVEVTAGYQINEQHKVNASYAHSEgkyDDNKDGKVd 593
Cdd:PRK13483 480 tvfYNEFKDKItrvacpatqctdGPNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTD---SEQKSGAY- 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 594 tKFNGLNIAPDRVIASwSANWN--DQWSSFVQANYAFSRSFDDAG-----LAFDGYLLMDAAVGYKLPYG-RLNVAVANL 665
Cdd:PRK13483 556 -KGSPLNQLPKHLFQA-SLNWEptDRLNSWARVNYRGEESQPTTGpssssFIAPSYTFLDLGANYQLTDNlKLSAGIYNL 633
|
730 740
....*....|....*....|...
gi 2316062834 666 LDKQyITYYSQAGLNNNTRYFSG 688
Cdd:PRK13483 634 FDKE-INYEEYGYVEDGRRYWLG 655
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| CirA |
COG1629 |
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism]; |
31-685 |
7.63e-93 |
|
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain] Cd Length: 644 Bit Score: 301.75 E-value: 7.63e-93
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 31 DEMVITASRSNIQQQKAPQVVTVITKEQIEQQMqvTSDSSQILsNLLPSFSPSRQKMSGSGETFRG-----RAALVMIDG 105
Cdd:COG1629 2 EEVVVTATRTDESLQDVPGSVSVISREQLEDQP--ATDLGDLL-RRVPGVSVTSAGGGAGQISIRGfggggNRVLVLVDG 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 106 IPQSNPLRPTGReMHTIDFSMVERVEVIHGANAT-NGMGATGGVINIITRRPENGsfnQHVNVQTTLptekirGETASYK 184
Cdd:COG1629 79 VPLNDPSGGDGG-LSYIDPEDIERVEVLRGPSSAlYGSGALGGVINIVTKKPKDG---KGGEVSASY------GSYGTYR 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 185 TTYRVDGREDYLDYLFSIGYENQGLYLDGNnrpvgvdntqgdtmDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY 264
Cdd:COG1629 149 ASLSLSGGNGKLAYRLSASYRDSDGYRDNS--------------DSDRYNLRAKLGYQLGDDTRLTLSASYSDSDQDSPG 214
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 265 LSVDGIRSQGLPTTSVRGTPRGEAPHNSIWTTGFTYE-NHDLAGMKLSALLFNQRYealfgATNSSTFQDPAIAPRGSLY 343
Cdd:COG1629 215 YLTLAALRPRGAMDDGTNPYSNDTDDNTRDRYSLSLEyEHLGDGLKLSASAYYRYD-----DTDLDSDFTPTPADGGTLE 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 344 DQSRSvANKYGTKLALTKDDLLDDTLKITVGFDTLYDKGKQDLYLT----------QRTYVPETEYTNYSPFIQGEYQLL 413
Cdd:COG1629 290 QTDFD-NRTYGLELRLTYDLGFGGKHTLLVGLDYQRQDLDGSGYPLdlgsgslptlTSGADDDGTTTSLALYAQDTYKLT 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 414 DNVTLHAGIRHEIAKLKVGDYqtlasNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRaLRTIKR 493
Cdd:COG1629 369 DKLTLTAGLRYDYVSYDVDDT-----VTGTDSASGSRSYSAFSPSLGLTYQLSPNLSLYASYSRGFRAPTFGE-LYANGT 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 494 SGVSLKNFDgFKPIVTDNVETGFRFKR--DKFDFEASYYESKSK-----LGENVTESGGVFLSERQRTQIRGVEVTAGYQ 566
Cdd:COG1629 443 DPYSVGNPD-LKPETSTNYELGLRYRLldGRLSLSLALFYSDVDneilsVPLPNDSGFSTYYTNAGKARSYGVELELSYQ 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 567 INEQHKVNASYAHSEGKYDDNKDGKVDTKFNGL-NIAPDRVIASWSANWNDQWSSFVQANYAFSRSFDDAGLAF--DGYL 643
Cdd:COG1629 522 LTPGLSLNASYSYTDAKFDDDTDGSADLDGNRLpGVPPLTANLGLTYEFPGGWSLGLGVRYVGDRYLDDANTQGapGGYT 601
|
650 660 670 680
....*....|....*....|....*....|....*....|...
gi 2316062834 644 LMDAAVGYKLPYG-RLNVAVANLLDKQYITYYSQAGLNNNTRY 685
Cdd:COG1629 602 LVDLGAGYRFGDNlTLSLGVDNLFDKKYATSLSVRASNVRGFL 644
|
|
| ligand_gated_channel |
cd01347 |
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ... |
50-701 |
8.73e-69 |
|
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain] Cd Length: 635 Bit Score: 237.35 E-value: 8.73e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 50 VVTVITKEQIEQQMQVTSDssqILSNLLPSFSPSRQ-KMSGSGETFRGRAA---LVMIDGIPQSNPLRPTGREMHTIDFS 125
Cdd:cd01347 1 SVSVITAEDIEKQPATSLA---DLLRRIPGVSVTRGgGGGGSTISIRGFGPdrtLVLVDGLPLASSNYGRGVDLNTIPPE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 126 MVERVEVIHGANAT-NGMGATGGVINIITRRPengsfnqhvnvqttlpTEKIRGE-TASYKTTYRVDGREDYLDYLFSIG 203
Cdd:cd01347 78 LIERVEVLKGPSSAlYGSGAIGGVVNIITKRP----------------TDEFGGSvTAGYGSDNSGSSGGGGFDVSGALA 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 204 YENQGLY-LDGNNRP---VGVDNTQGDTMDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY--LSVDGIRSQGLPT 277
Cdd:cd01347 142 DDGAFGArLYGAYRDgdgTIDGDGQADDSDEERYNVAGKLDWRPDDDTRLTLDAGYQDQDADGPGgtLPANGTGSSLGGG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 278 TSVRGTPRGEAPHNSIWTTGFTYE---NHDLAGMKLSALLFNQRYEALFGATNSSTFQDPAIAPRGSLYDQSRSVANKYG 354
Cdd:cd01347 222 PSSNTNGDRDWDYRDRYRKRASLGlehDLNDTGWTLRANLSYSYTDNDGDPLILNGGNNAAGGDLGRSGYSSERDTTQLG 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 355 TKLALTKD-DLLDDTLKITVGFDTLYDKGKQDlyltqrtyvpeteytNYSPFIQGEYQLLDNVTLHAGIRHEiaklkvgD 433
Cdd:cd01347 302 FDAGLNAPfGTGPVAHTLTLGVEYRREELDEK---------------QTALYAQDTIELTDDLTLTLGLRYD-------H 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 434 YQTLASNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRALRTIKRSGVSLKNFDGFKPIVTDNVE 513
Cdd:cd01347 360 YDQDSKDTIAGGTTAKKSYSHWSPSLGLVYKLTDGLSLYASYSQGFRAPSLGELYGGGSHGGTAAVGNPNLKPEKSKQYE 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 514 TGFRFKRDK-FDFEASYYESKSK-----LGENVTESGGVFLSERQRTQIRGVEVTAGYQINEQHKVNASYAHSEGKYDDN 587
Cdd:cd01347 440 LGLKYDPGDgLTLSAALFRIDIKneivsTPTNTGLGLVTVYVNGGKARIRGVELEASYDLTDGLGLTGSYTYTDTEVKRT 519
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 588 KDGKVDTKFngLNIAPDRVIASWSANWN-DQWSSFVQANYAFSRSFDDAGLA----FDGYLLMDAAVGYKLPYG-RLNVA 661
Cdd:cd01347 520 DGATTGNRL--PGIPKHTANLGLDYELPdEGLTAGGGVRYRGKQYADTANGNntvkVPGYTLVDLSASYQFTKNlTLRLG 597
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2316062834 662 VANLLDKQYITYYSQAGlnNNTRYFSGRGRTVTLGYSIDF 701
Cdd:cd01347 598 VNNLFDKDYYTSLSVRG--SGLYGYYGPGRTYYLSVSYKF 635
|
|
| FepA |
COG4771 |
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ... |
4-653 |
2.92e-66 |
|
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain] Cd Length: 612 Bit Score: 229.74 E-value: 2.92e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 4 LLALMPCVLIAPAYAQDDTTKKDEASGDEMVITASRSNIQQQKAPQVVTVITKEQIEQQMqvTSDSSQILsNLLPSFSPS 83
Cdd:COG4771 1 LLLASLLLLLALAAQAADALAEDATELEEVVVTATRTEQSLSDAPASVSVITAEEIEKLG--ATDLADAL-RLLPGVSVT 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 84 RQKMSGSGETFR-----GRAALVMIDGIPQSNPLRPTGREMHTIDFSMVERVEVIHGANAT-NGMGATGGVINIITRRPE 157
Cdd:COG4771 78 RSGGRGGSSGISirglgGDRVLVLIDGVPVNNPALGGGGDLSYIPPDDIERIEVIRGPASAlYGSDAIGGVINIITKKPT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 158 NgsfNQHVNVQTTLPTEkirgETASYKTTYRVDGREDYLDYLFSIGYENQGLYLDGNNRPVGVDNtqgdtmDSRAYDFMG 237
Cdd:COG4771 158 D---ELEGSVSLGYGSN----GNGTYSGSLSLGGPGDKLSFLLSGSYRDRDGYLDYRNGGFVGNS------GYERYNLNA 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 238 KVGYWLDDYQRIQLSVNRYNIKNENNYLSVDGIRSQGLPTTSVRGTPRGeaphnsiWTTGFTYeNHDLAGmKLSALLFNQ 317
Cdd:COG4771 225 KLGYRLSDNHRLSLSGGYSRQDRDGGPPTLGDTEISSDNAGDRDTTTDR-------GNYSLRY-NGDLGD-NLDLSLYYS 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 318 RYEalfgaTNSSTFQDPAIAPRGSLYDQSRsvankYGTKLALTKDdlLDDTLKITVGFDTLYDKGKQDLYLTQRTYvpet 397
Cdd:COG4771 296 RTD-----RDSTNGSLGGSTGSFSDSDDTT-----YGLELDLTYP--LGGNHTLTLGAEYRYDDLDSSSFLGGADA---- 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 398 EYTNYSPFIQGEYQLLDNVTLHAGIRHEiaklkvgDYQTLASNNGVTVqggSPKfnetlynAGIIYAATDSLSLFANYSE 477
Cdd:COG4771 360 SRDTYGLFAQDEWKLTDKLTLTAGLRYD-------YYSTFGASNYTAF---SPR-------LGLRYDLSDNLTLRASYGR 422
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 478 GFGMPDVG--RALRTIKRSGVSLKNFDgFKPIVTDNVETGFRFK--RDKFDFEASYYESKSK----LGENVTESGGVFLS 549
Cdd:COG4771 423 GFRAPSLAelYGSGTGTPGRYVLGNPD-LKPETSDNYELGLEYRlgNGGLSLSLTGFYTDIKdlivLVPVGPGPGDVLQY 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 550 ERQ-RTQIRGVEVTAGYQINEQHKVNASYAHSEGKYDdnkDGKVDTKFNglNIAPDRVIASWSANWNDQWSSFVQANYAF 628
Cdd:COG4771 502 ENVgKARTYGLELELKYRLGKGLTLTASYTYLDSKID---DGDTGEPLP--NVPPHKANLGLDYRLPKWWLLLLLTRYYG 576
|
650 660
....*....|....*....|....*....
gi 2316062834 629 SRSFDDAG----LAFDGYLLMDAAVGYKL 653
Cdd:COG4771 577 GRYVTPPSgrleGYTPGYTLLDLRASYKL 605
|
|
| FecA |
COG4772 |
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]; |
1-701 |
5.27e-51 |
|
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain] Cd Length: 681 Bit Score: 188.60 E-value: 5.27e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 1 MRTLLALMPCVLIAPAYAQDDTTkkdeasgDEMVITASRSNIQQ-QKAPQVVTVITKEQIEQQMQVtsDSSQILSN---- 75
Cdd:COG4772 1 MRRALAAALLLAAAAAAEAATTL-------ETVVVTGSRAAEARlKDVPGSVSVVDREELENQAAT--SLREVLRRvpgv 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 76 ---------LLPSFSpSRqkmsGSGETfRGRAALVMIDGIPQSNPLR--PTGREMHTIDfsMVERVEVIHGANA-TNGMG 143
Cdd:COG4772 72 nvqeedgfgLRPNIG-IR----GLGPR-RSRGITLLEDGIPIAPAPYgdPAAYYFPDLE--RMERIEVLRGAAAlRYGPQ 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 144 ATGGVINIITRRPENgsfNQHVNVQTTLptekirGETASYKTTYRVDGREDYLDYLFSIgyenQGLYLDGNnRpvgvDNT 223
Cdd:COG4772 144 TVGGAINFVTRTIPT---AFGGELRVTG------GSFGYRRTHASVGGTVGNFGYLVEY----SRKRGDGF-R----DNS 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 224 qgdtmDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNeNNYLsvdgirsqGL--------PTTSVRGTPRGEAPHNSIwt 295
Cdd:COG4772 206 -----GFDINDFNAKLGYRLSDRQELTLKFQYYDEDA-NTPG--------GLtdaqfdadPRQSYRPADQFDTRRTQL-- 269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 296 tGFTYENHDLAGMKLSALLFnqRYEALFGATNSSTFQDPAiAPRGSLYDQSRSVANkYGTKLALT-KDDLLDDTLKITVG 374
Cdd:COG4772 270 -SLRYEHQLSDNTTLTTTAY--YNDFSRNWYIRQNTADPN-TPGLGLRGNPRGYRS-YGIEPRLThRFELGGVPHTLEVG 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 375 F----DTLYDKGKQDLYLTQRTYVPETEY-----TNYSPFIQGEYQLLDNVTLHAGIRHEIAKLKVGDYQTLASNNGVTv 445
Cdd:COG4772 345 LryhrEEEDRKQYVNTYGQGRSGAGLRRDrrfsaDALAAYAQNRFELTGRLTLTPGLRYEHIRRDRTDRYSTRTGGDDS- 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 446 qgGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRAlrtikrsGVSLKNFDGFKPIVTDNVETGFRFKRDK-FD 524
Cdd:COG4772 424 --GSNSYSEFLPGLGLLYQLTDNLQLYANVSRGFEPPTFGDL-------AYGNGGNPDLKPEKSWNYELGTRGRIGNgLS 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 525 FEASYYESKSK-LGENVTESGGVfLSERQ---RTQIRGVEVTAGYQINEQHKVN----ASYAHSEGKYDDNKDGkvDTKF 596
Cdd:COG4772 495 AEVALFYIDYDnELGSCSAAGGD-RSTFTnagETRHQGLELALDYDLLKGGGLGlplfAAYTYTDAEFTSDFGP--VFAG 571
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 597 NGLNIAPdRVIASWSANW-NDQWSSFVQANYaFSRSFDDA---------GLAfDGYLLMDAAVGYKLPYG-RLNVAVANL 665
Cdd:COG4772 572 NRLPYVP-RHQLTAGLGYeHGGWTANLNGRY-VSEQFTDAantvadgsfGKI-PSYTVLDLSASYDFGKNlSLFAGVNNL 648
|
730 740 750
....*....|....*....|....*....|....*..
gi 2316062834 666 LDKQYITyysqAGLNNNTR-YFSGRGRTVTLGYSIDF 701
Cdd:COG4772 649 FDKRYIA----SRAPNYAAgIRPGPPRTVYAGLRLKF 681
|
|
| Fiu |
COG4774 |
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism]; |
48-701 |
2.37e-47 |
|
Outer membrane receptor for monomeric catechols [Inorganic ion transport and metabolism];
Pssm-ID: 443806 [Multi-domain] Cd Length: 639 Bit Score: 177.38 E-value: 2.37e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 48 PQVVTVITKEQIEQQmQVTSdSSQILSNLlPSFSPSRQKmSGSGETFRGR----AALVMIDGIPQSNPLRptgremhtID 123
Cdd:COG4774 10 PQSVTVVTRELIEDQ-GATS-LADALRNV-PGVTFGAGE-GGNGDSFSIRgfsaSGDIYVDGLRDPGQYR--------RD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 124 FSMVERVEVIHGANAT-NGMGATGGVINIITRRPENGSFNqhvNVQTTLPTEKIRGETASY------KTTYRVDG----R 192
Cdd:COG4774 78 TFNLERVEVLKGPASVlYGRGSPGGVINLVTKRPTDEPFT---EVTLTYGSDGQRRATLDVngplgdDLAYRLNGmyrdS 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 193 EDYLDY----------------------LFSIGYENQ------GLYLDGNNRPVGVD-----NTQGDTMDSRAYDFMGKV 239
Cdd:COG4774 155 DSYRDGvdndrwgiapsltwrlgdrtrlTLDYEYQDDdrtpdyGVPAVANGRPVDVDrstfyGQPDDYSDSETDSATLRL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 240 GYWLDDYQRIQLSVNRYNIKNENNYLSVDGirsqGLPTTSVRGTPRGEAPHNSIWT--TGFTYeNHDLAGMKlsallfnq 317
Cdd:COG4774 235 EHDFNDNWTLRNALRYSDYDRDYRNTYPTG----GNATGTVTRSAYRRDQDNDTLSnqTDLTG-KFDTGGVK-------- 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 318 rYEALFGATnsstfqdpaiaprgslYDQSRSVANKYGTKLALTKDDLLDDTLKITVGFDTLYDKGKqdlyltqrtyvpET 397
Cdd:COG4774 302 -HTLLAGVE----------------YSREDSDNARYSGGGTAPTVNLYNPVYGAPVTGPTLGGADN------------DS 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 398 EYTNYSPFIQGEYQLLDNVTLHAGIRHEIAKLKVGDYQTLASNNGVTvqggspkFNETLYNAGIIYAATDSLSLFANYSE 477
Cdd:COG4774 353 RTDTTGLYLQDTISLTDRWSLLAGLRYDRFDTDYTDRTTGATTSSYD-------DSAFSPRAGLVYKPTPNLSLYASYST 425
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 478 GFGMPdvgralrtikrSGVSLKNFDG--FKPIVTDNVETGFR--FKRDKFDFEASYYE-SKSKLGENVTESGGVF-LSER 551
Cdd:COG4774 426 SFNPG-----------GGAPSLSNAGqaLDPEKSRQYEVGVKwdLLDGRLSLTAALFRiEKTNVRTTDPANPGVYvQTGE 494
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 552 QRTqiRGVEVTAGYQINEQHKVNASYAHSEGKYDdnKDGKVDTKFNGLNIAPDRViASWSANWNDQWSSF---VQANYAF 628
Cdd:COG4774 495 QRS--RGVELEATGELTPGWSVLAGYTYLDAEIT--KSANAANVGNRLPNVPRHS-ASLWTTYDLPLPGLtlgGGVRYVG 569
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2316062834 629 SRSFDDAGLAF-DGYLLMDAAVGYKLPYG-RLNVAVANLLDKQYItyysqAGLNNNTRYFSGRGRTVTLGYSIDF 701
Cdd:COG4774 570 SRYADAANTVKlPSYTRFDAGASYRLNKNlTLRLNVNNLTDKRYY-----ASAYGSGYVTPGAPRTVLLSASYRF 639
|
|
| TonB-siderophor |
TIGR01783 |
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ... |
46-701 |
5.61e-46 |
|
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain] Cd Length: 651 Bit Score: 173.75 E-value: 5.61e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 46 KAPQVVTVITKEQIEQQmQVTsDSSQILSNLLPSFSPSRQ-KMSGSGETFRGRAALVMIDGIPqSNPLRPTGREMHTI-D 123
Cdd:TIGR01783 1 DIPQSVSVITRQELEDQ-QAG-SLSEALQRVPGVVVGGSGgTTQFGNITIRGFGLEVDIDNVY-LDGVPLLSRGNLAIvD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 124 FSMVERVEVIHGANAT-NGMGATGGVINIITRRPEN---GSFNQHVnvqttlptekirGETASYKTTYRVDGR---EDYL 196
Cdd:TIGR01783 78 PAMVERVEVLRGPASLlYGGSAPGGVINIVTKRPQDepkGSVTFGA------------GTRSGYRTAFDLGGPlgaDGTF 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 197 DYLFSIGYENQGLYLDGNnrpvgvdntqgdtmDSRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNYLSV---DGIRSQ 273
Cdd:TIGR01783 146 RGRLNGARQDGDSFYDGA--------------GEETRLGATATDWQLDDRTLLRLGAYYQKERDRGGYGGLpasGGTSGR 211
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 274 GLPTTSVRGTPRgeaphnsiWTTGFTYEnhDLAGMKLSALLFNQRYEALFGATnSSTFQDPAIAPRGSLYDQSRSVANky 353
Cdd:TIGR01783 212 DLSSDRYLGTSS--------NRNYDDRE--YLSYGLSLEYQFNDVWTGKQNLR-YSYFDTDSNQVQASGYSSDGGLFG-- 278
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 354 gtkLALTKDDLLDDTLKITVGFDTLYDKG--KQDLYLTQR-----------TYVPETEYTNYSPFIQGEYQ--------- 411
Cdd:TIGR01783 279 ---RSLTVVNVKQDRVQIDAGLDGEFETGpiEHDLLLGVSygqrttnrfnnTGYPSDNIYSLTATSSARTDigdspkdra 355
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 412 -----------------LLDNVTLHAGIRHEIAKLKvgdyqtlaSNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFAN 474
Cdd:TIGR01783 356 lssttkalngvalqrilLADKWTLTLGGRYDSVDVK--------SNNGVAGSTGKRDDSQFTPSLGVAYKPTDDWSLYAS 427
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 475 YSEGFGMPdvGRALRTIKRSGvslknfDGFKPIVTDNVETGFRFKR-DKFDFEASYYESKSKLGENVTESGGVFLSERQR 553
Cdd:TIGR01783 428 YAESFKPG--GYYPKGAGNSG------DILEPEKGKNYELGVRYDLgDSLLATAALFRITKDNQLVQDPVNGTFSVNAGK 499
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 554 TQIRGVEVTAGYQINEQHKVNASYAHSEGKYddNKDGKVDTKFNGLNIAPD---RVIASWSA-NWNDQWSSFVQANYAFS 629
Cdd:TIGR01783 500 TRNRGVELEARGYLTPGLSLSAGYTYTDAEF--TEDTNGDTQGNTVPFVPKhtaSLWASYAPpVGDNGLTLGGGVQYTGK 577
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2316062834 630 RSFDDAG-LAFDGYLLMDAAVGYKLPY---GRLNVAVANLLDKQYITYYSQAGLNNNTRYfsGRGRTVTLGYSIDF 701
Cdd:TIGR01783 578 AYVDGGNtGKVPSYTVVDLSVRYDLTKkknLTLALNVNNLFDRDYYTSGYRWGPSAYIYP--GAPRTVGLSVSYDF 651
|
|
| FhuE |
COG4773 |
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion ... |
3-701 |
1.00e-42 |
|
Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism];
Pssm-ID: 443805 [Multi-domain] Cd Length: 692 Bit Score: 164.68 E-value: 1.00e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 3 TLLALMPCVLIAPAYAQDDTtkkDEASGDEMVITASRSNIQQQKA----------------PQVVTVITKEQIEQQmQVT 66
Cdd:COG4773 8 SGLAAAAAGALAQAAAAAAA---EATTLPEVTVTGTAEGTGGYTAkssstatkldtplretPQSVSVVTRQLIEDQ-GAT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 67 SdSSQILSNLlPSFSPSRQKmSGSGETF--RG-RAALVMIDGIPQSNPLRPTgremhtIDFSMVERVEVIHGANAT-NGM 142
Cdd:COG4773 84 T-LDDALRNV-PGVTVSSYD-GGGRDSFsiRGfSIDNYLRDGLPLGGFGGGQ------PDTANLERVEVLKGPAGLlYGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 143 GATGGVINIITRRPEN----------GSFNQ---HVNVQTTLptekirgeTASYKTTYRVDGredyldylfsiGYENQGL 209
Cdd:COG4773 155 GSPGGLVNLVTKRPTAepqgevslsaGSWDTyraTADVGGPL--------NEDGTLRYRLNA-----------AYEDGDS 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 210 YLDGNnrpvgvdntqgdtmDSRAYDFMGKVGYWLDDYQRIQLSVN--RYNIKNENNYLSVDGIRSqGLPTTSVRGTPrge 287
Cdd:COG4773 216 FRDGV--------------DNRRTLIAPSLDWDLTDDTTLTLGAEyqDDDSTGDRGFLPLDGTLL-DLPRSTNLGEP--- 277
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 288 APHNSIWTTGFTYE-NHDLA-GMKLSALLFNQRYEA---LFGATNSSTFQDPAIAPRGSLYDQSRSVankYGTKLALTKD 362
Cdd:COG4773 278 WDYYDTETTTLFAElEHRFNdDWSLRANARYSDSDRdgrSAYAYGAPDAATGTLTRYASARDGDSRS---DSLDANLNGK 354
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 363 -DLLDDTLKITVGFDTLYDKGKQ--------DLYLTQRTYVPE---------TEYTNYSPFIQGEYQLLDNVTLHAGIRH 424
Cdd:COG4773 355 fETGGLEHTLLVGADYSRYDSDSdsatagtiNIYNPVYGNLPEpdfdasdtdTTTRQTGLYAQDQISLTDRLSLLLGGRY 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 425 EIAKLKvgdyqtlaSNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFgMPDVGRalrtikrsgvslkNFDG- 503
Cdd:COG4773 435 DWYETD--------STNRLGGSTTSYDDSAFTPRAGLVYDLTPGLSLYASYSESF-EPQSGA-------------DNNGn 492
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 504 -FKPIVTDNVETGFR--FKRDKFDFEASYYE-SKSKLGENVTESGGVFL-SERQRTqiRGVEVTAGYQINEQHKVNASYA 578
Cdd:COG4773 493 pLDPETGKQYEAGVKgeLFDGRLNATLAVFDiTQKNVATTDPDNPNFYVqVGEVRS--RGVELELSGELTPGLNLIAGYT 570
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 579 HSEGKYDDNKDGKVDTKFNGlniAPDRVIASWS-----ANWNDQWSSFVQANYAFSRSFDDAG-LAFDGYLLMDAAVGYK 652
Cdd:COG4773 571 YTDAKITKDADALEGKRLTN---VPRHTASLWTtyrfpSGALKGLGLGGGVRYVGERYGDAANtFTLPSYTLVDAGARYD 647
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 2316062834 653 LPYG-RLNVAVANLLDKQYITyysqaGLNNNTRYFSGRGRTVTLGYSIDF 701
Cdd:COG4773 648 LGKNwTLQLNVNNLFDKKYYA-----SSGSRGYVYYGAPRNVRLSLSYKF 692
|
|
| TonB_dep_Rec |
pfam00593 |
TonB dependent receptor; This model now only covers the conserved part of the barrel structure. |
260-700 |
1.12e-34 |
|
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain] Cd Length: 475 Bit Score: 137.98 E-value: 1.12e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 260 NENNYLSVDGIRSQGLPTTSVRGTPRGEAPHNSIWTTGFTYENHDLAGMKLSaLLFNQRYEALFGATNSSTFQDPAIAP- 338
Cdd:pfam00593 29 DLGLTLDGYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGYDYDLGDGLSWLST-LRLGLRYSSLDGDYTSNSSGLSGAGDy 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 339 -RGSLYDQSRSVANKYGTKLALTKDDLL-DDTLKITVGFDTLYDKGKQ--DLYLTQRTYVPETEYTNYSPFIQGEYQLLD 414
Cdd:pfam00593 108 lSDDRLYGLYGLDGDLELSLDLSHDLLLgVELRTAGLDYRRLDDDAYDpyDPANPSSSSYSDTTTDSYGLYLQDNIKLTD 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 415 NVTLHAGIRHEiaklkvgDYQTLASNNGVTVQGGSPKFNETLYNAGIIYAATDSLSLFANYSEGFGMPDVGRALRTIKRS 494
Cdd:pfam00593 188 RLTLTLGLRYD-------HYSTDGDDGNGGGDNFSRSYSAFSPRLGLVYKPTDNLSLYASYSRGFRAPSLGELYGSGSGG 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 495 GVSLKNF--DGFKPIVTDNVETGFRFKRDKFDFEASYYESKSK-----LGENVTESGGVFLSER-QRTQIRGVEVTAGYQ 566
Cdd:pfam00593 261 GGGAVAGgnPDLKPETSDNYELGLKYDDGRLSLSLALFYIDIKnlitsDPDGPGLGGTVYTYTNvGKARIRGVELELSGR 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 567 INEQHKVNASYAHsegkYDDNKDGKVDTKFNGLNIAPDRViASWSANWNDQ---WSSFVQANYAFSRSF----DDAGLAF 639
Cdd:pfam00593 341 LWGLGLSGGGYTY----TDADDDADADDTGNPLPNVPRHT-ANLGLTYDFPlggWGARLGARYVGSGERrygdAANTFKT 415
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2316062834 640 DGYLLMDAAVGYKLPYG-RLNVAVANLLDKQYITYYSQAGlnNNTRYFSGRGRTVTLGYSID 700
Cdd:pfam00593 416 PGYTLVDLSAGYRLNKNlTLRLGVNNLFDKYYKRYYSSGG--GNLGGYPGPGRTFYLGLSYK 475
|
|
| BtuB |
COG4206 |
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism]; |
33-320 |
6.99e-24 |
|
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain] Cd Length: 276 Bit Score: 101.87 E-value: 6.99e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 33 MVITASRSNIQQQKAPQVVTVITKEQIEQQmqVTSDSSQILSNLlPSFSPSRQKMSGSGET--FRG---RAALVMIDGIP 107
Cdd:COG4206 1 VVVTATRLEQSKSDLTGSVTVIDAEELERS--GATSLADALRRV-PGVQVSSSGGPGSAASisIRGlgsNQTLVLIDGVP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 108 QSNPLrPTGREMHTIDFSMVERVEVIHGANAT-NGMGATGGVINIITRRPENGsfnQHVNVQTTLptekirGETASYKTT 186
Cdd:COG4206 78 LNDPS-LGGVDLSLIPPDDIERIEVLKGAASAlYGSDAIGGVINITTKKGKKG---FKGSVSASY------GSFGTRRLS 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 187 YRVDGREDYLDYLFSIGYENQGLYLDGNNRPVGVDNTQGDTmdsraydFMGKVGYWLDDYQRIQLSVNRYNikNENNYLS 266
Cdd:COG4206 148 ASLSGGAGKFSYSLSASYRRSDGYRYNDPDLRNNDGYENTS-------LNARLGYKLGDNGSLSLSGGYSD--SERGYPG 218
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....
gi 2316062834 267 VDGIRSQGLPTTSVRGtpRGEAPHNSIWTTGFTYENHDLAGMKLSALLFNQRYE 320
Cdd:COG4206 219 AVGSDRNLRLSLSLEY--KLSDGWSLLLLAYYYYDRDYEDGGGDSAGTSNTDGA 270
|
|
| PRK13483 |
PRK13483 |
ligand-gated channel protein; |
3-688 |
1.39e-15 |
|
ligand-gated channel protein;
Pssm-ID: 184080 [Multi-domain] Cd Length: 660 Bit Score: 80.59 E-value: 1.39e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 3 TLLALMPCVLIAPAYAQDDTTKKDEAsgdeMVITASRSNIQQQKAPQVVTVITKEQIEQQM--QVTsDSSQILSNLLPSF 80
Cdd:PRK13483 10 SALCLLPAVFVTHALAQAAPDKTMET----VVVTASGYEQQIRDAPASISVITREDLENRFyrDLT-DALLDVPGVVVTG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 81 SPSRQKMSgsgetFRGRAA---LVMIDGIPQSN-PLRP----TGREMH-TIDFSMVERVEVIHGANAT-NGMGATGGVIN 150
Cdd:PRK13483 85 GGDRTDIS-----LRGMGSqytLILVDGKRQSSrETRPnsdgPGVEQAwTPPLAAIERIEVIRGPMSSlYGSDAIGGVIN 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 151 IITRR-PENGSFNqhVNVQTTLPTEKIRGEtaSYKTTYRVDGredyldylfSIGYENQGLYLDGNNRPVGVDNTQGDTMD 229
Cdd:PRK13483 160 IITRKvPNEWQGE--VRLDTTLQENSDSGN--VYQANFFVNG---------PLIKDLLGLQLYGQYTQREEDDIEGGYRD 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 230 SRAYDFMGKVGYWLDDYQRIQLSVNRYNIKNENNY-LSVDGIRSQglPTTSVRGTPrgEAPHNsiwttgfTYENHDLagm 308
Cdd:PRK13483 227 KDARSLTAKLALTPNEDHDIMLEVGTSNQERDSTVgKTVAPLAPG--ESCGRRGCP--ESSTT-------EYERSTV--- 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 309 klsALLFNQRYeaLFGATNSstfqdpaiaprgslYDQSRSVANKygTKLALTKDDLLDDTLKITVGFDTLYDKG----KQ 384
Cdd:PRK13483 293 ---SLSHTGRW--DFGTSDT--------------YIQHEEFDNK--SREMKIKNTDFQSSLVAPLGQEHTLTFGaaynHQ 351
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 385 DL------YLTQRTYVpetEYTNYSPFIQGEYQLLDNVTLHAGIR--HEiaklkvgdyqtlaSNNGVTVqggSPKfnetL 456
Cdd:PRK13483 352 DLtdetsnQISDLTDI---SRTQWAVFSEDEWRIADDFALTGGLRldHD-------------ENFGGHV---SPR----V 408
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 457 YNagiIYAATDSLSLFANYSEGFGMPDvgraLRTI-------KRSGVSLKNFDgFKPIVTDNVETGFRFKRDKfDFEAS- 528
Cdd:PRK13483 409 YG---VWNLAPSWTVKGGVSTGFRAPS----LRQTtpdwgqvSRGGNIYGNPD-LKPETSLNKELGLYYDLGS-GLTASl 479
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 529 ---YYESKSKL------------GENVTESGGVFLSERQRTQIRGVEVTAGYQINEQHKVNASYAHSEgkyDDNKDGKVd 593
Cdd:PRK13483 480 tvfYNEFKDKItrvacpatqctdGPNQFGADPTTYVNIDEAVTQGVEASLSYPITSTLSLSGNYTYTD---SEQKSGAY- 555
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 594 tKFNGLNIAPDRVIASwSANWN--DQWSSFVQANYAFSRSFDDAG-----LAFDGYLLMDAAVGYKLPYG-RLNVAVANL 665
Cdd:PRK13483 556 -KGSPLNQLPKHLFQA-SLNWEptDRLNSWARVNYRGEESQPTTGpssssFIAPSYTFLDLGANYQLTDNlKLSAGIYNL 633
|
730 740
....*....|....*....|...
gi 2316062834 666 LDKQyITYYSQAGLNNNTRYFSG 688
Cdd:PRK13483 634 FDKE-INYEEYGYVEDGRRYWLG 655
|
|
| PRK13524 |
PRK13524 |
FepA family TonB-dependent siderophore receptor; |
4-180 |
1.46e-15 |
|
FepA family TonB-dependent siderophore receptor;
Pssm-ID: 237410 [Multi-domain] Cd Length: 744 Bit Score: 80.46 E-value: 1.46e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 4 LLALMPCVLIAPAYAQDDTTKKDEASGDEMVITASRSNIQqqkAPQVvTVITKEQIEQQmQVTSDSSQILSNL----LPS 79
Cdd:PRK13524 12 VNLGIYGVAQAAEAEDAKTDDTPASHEDTIVVTAAEQNLQ---APGV-STITAEDIRKR-PPANDVSEIIRTMpgvnLTG 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 80 FSPSRQKMSGSGETFRGRA---ALVMIDGIPQS--NPLRPTGR-EMHT------IDFSMVERVEVIHG-ANATNGMGATG 146
Cdd:PRK13524 87 NSTSGQRGNNRQIDIRGMGpenTLILIDGKPVSsrNSVRYGWRgERDTrgdtnwVPPEMIERIEVLRGpAAARYGNGAAG 166
|
170 180 190
....*....|....*....|....*....|....*..
gi 2316062834 147 GVINIITRRPEN---GSFNQHVNVqttlPTEKIRGET 180
Cdd:PRK13524 167 GVVNIITKKPTGewhGSWNTYFNA----PEHKAEGAT 199
|
|
| PRK13528 |
PRK13528 |
outer membrane receptor FepA; Provisional |
2-669 |
1.62e-15 |
|
outer membrane receptor FepA; Provisional
Pssm-ID: 237413 [Multi-domain] Cd Length: 727 Bit Score: 80.57 E-value: 1.62e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 2 RTLLALMPCVLIAPAYAQDDTTKKDEASGDEMVI--TASRSnIQQQKApqvVTVITKEQIEQQMQVtSDSSQILSNL--- 76
Cdd:PRK13528 6 NKILWLLTVLLVGLNSPVSAAESSDDDNGETMVVeaTAEQE-LKQQPG---VSIITAEDIKKRPPV-NDLSDIIRKMpgv 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 77 -LPSFSPSRQKMSGSGETFRGRA---ALVMIDGIPQS--NPLRPTGR-EMHT------IDFSMVERVEVIHG-ANATNGM 142
Cdd:PRK13528 81 nLTGNSASGTRGNNRQIDIRGMGpenTLILIDGVPVTsrNSVRYSWRgERDTrgdtnwVPPEMVERIEVIRGpAAARYGS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 143 GATGGVINIITRRPEN---GSfnqhVNVQTTLPTEKIRGetASYKTTYRVDGredyldylfSIGYENQGLYLDGN----- 214
Cdd:PRK13528 161 GAAGGVVNIITKRPTNdwhGS----LSLYTNQPESSKEG--ATRRANFSLSG---------PLAGDALTMRLYGNlnktd 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 215 ------NRPVGVDNTQGDTmDSRAYDFMGKVGYWLDDYQRIQLSV------NRY--NIKNENNYLSVDGIRSQGLPTTSV 280
Cdd:PRK13528 226 adswdiNSSAGTKNAAGRE-GVRNKDINGVLSWKMTPQQILDFEAgysrqgNIYagDTQNSNSSAVTESLAKSGKETNRL 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 281 RGTPRGEApHNSIWT-----TGFTYENHDlagmklsallfNQRY-EALFGATNSSTFQDPAiaprgslYDQSRSVANKYG 354
Cdd:PRK13528 305 YRQNYGLT-HNGIWDwgqsrLGFYYEKTN-----------NTRMnEGLAGGGEGRITADQT-------FTTSRLESYRTS 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 355 TKLALTKDDLLDDTLkiTVGFDTLYDKgKQDLYLTQRTYV---------------PETEYTNYSPFIQGEYQLLDNVTLH 419
Cdd:PRK13528 366 GELNVPLNWLFEQTL--TVGAEWNRDE-LNDPSSTSLTVKdgdiggisgsaadrsSKNKSEISALYVEDNIEPVPGTNLI 442
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 420 AGIRHeiaklkvgDYQTLASNNgvtvqgGSPKFNetlynagIIYAATDSLSLFANYSEGFGMPDVGRA------------ 487
Cdd:PRK13528 443 PGLRF--------DYHSEFGSN------WSPSLN-------LSQELGDYFKVKAGIARAFKAPNLYQSsegyllysrgng 501
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 488 -LRTIKRSGVSLKNFDGFKPIVTDNVETGFRFKRDKFDFEASY----YESKSKLGENV---TESGGVFLserqRTQIRGV 559
Cdd:PRK13528 502 cPKDITSGGCYLVGNKNLDPEISVNKEIGLEFTVDDYHASVTYfrndYQNKIVAGDDVigrTASGAYIL----QWQNGGK 577
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 560 EVTAGYQINEQHKV---------NASYA-HSEGKyddnkdgkvDTKfNGLNIAPDRVIASwSANW--NDQWSSfvQAN-- 625
Cdd:PRK13528 578 AVVEGLEGNLLVPLmkdrlnwntNATYMiTSEQK---------DTG-NPLSVIPKYTINS-TLDWqiTQALSA--NVNwt 644
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 2316062834 626 ---------YAFSRSFDDAGLAFD---GYLLMDAAVGYKLPYG-RLNVAVANLLDKQ 669
Cdd:PRK13528 645 lygkqkprtHAESRSEETGGLSGKelgAYSLVGVNVNYDINKNlRLNVGVSNLFDKQ 701
|
|
| PRK10064 |
PRK10064 |
catecholate siderophore receptor CirA; Provisional |
1-669 |
2.44e-14 |
|
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain] Cd Length: 663 Bit Score: 76.46 E-value: 2.44e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 1 MRTLLALMPCVLIAPAYAQDDTTKKDEASGDEMVITASRSNIQQQKAPQVVTVITKEQIeqQMQVTSDSSQILSNlLPSF 80
Cdd:PRK10064 1 MFRLNPFVRVGLCASAISCAWPVLAVDDDGETMVVTASAVEQNLKDAPASISVITQEDL--QRKPVQNLKDVLKE-VPGV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 81 SPSRQKMSGSGETFRGRAA---LVMIDG--IPQSNPL-RPTGREMHTIDFSMVERVEVIHGA-NATNGMGATGGVINIIT 153
Cdd:PRK10064 78 QLTNEGDNRKGVSIRGLDSsytLILIDGkrVNSRNAVfRHNDFDLNWIPVDAIERIEVVRGPmSSLYGSDALGGVVNIIT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 154 rRPENGSFNQHVNVQTTLPTEKIRGETasYKTTYRVDG-----------------REDYLDYLFSIGYENQGLYLDG--- 213
Cdd:PRK10064 158 -KKIGQKWHGTVTVDTTIQEHRDRGDT--YNGQFFTSGplidgvlgmkaygslakREKDDPQNSTTTDTGETPRIEGfts 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 214 NNRPVGVDNTQGDTMDSRAydfmgkvGYWLDDYQRIQLSVNRYNIKNENNYLSvdgirsqglpttsvrgtprgeapHNSI 293
Cdd:PRK10064 235 RDGNVEFAWTPNQNHDFTA-------GYGFDRQDRDSDSLDKNRLERQNYSLS-----------------------HNGR 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 294 WTTGftyeNHDLAgmklsalLFNQRYEALFGATNSstfqdPAIAprgslydQSRSVANKYGTKLaltkdDLLDDTLkiTV 373
Cdd:PRK10064 285 WDYG----NSELK-------YYGEKVENKNPGNSS-----PITS-------ESNSIDGKYTLPL-----TAINQFL--TF 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 374 GFDTLYDKGKQDLYLTQRTYvPETEYTNYSPFIQGEYQLLDNVTLHAGIRHEiaklkvgDYQTLASNNgvtvqggSPKfn 453
Cdd:PRK10064 335 GGEWRHDKLSDAVNLTGGTS-SKTSASQYALFVEDEWRIFEPLALTTGVRMD-------DHETYGDHW-------SPR-- 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 454 etlynAGIIYAATDSLSLFANYSEGFGMPDVGRA----LRTIKRSGVSLKNFDGFKPIVTDNVETGFrfkrdkfdfeasY 529
Cdd:PRK10064 398 -----AYLVYNATDTVTVKGGWATAFKAPSLLQLspdwTSNSCRGACKIVGSPDLKPETSESWELGL------------Y 460
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 530 YESKSKLGENVTESGGVFLSERQ------RT-----------------------------------QIRGVEVTAGYQIN 568
Cdd:PRK10064 461 YMGEEGWLEGVESSVTVFRNDVDdrisisRTsdvnaapgyqnfvgfetngrgrrvpvfryynvnkaRIQGVETELKIPFN 540
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 569 EQHKVNASYAHSEGKYDDNKDGK--VDTKFNGLNIAPDrviasWSANWNDQWSSFVQANY-AFSRSFDDAGLAFDGYLLM 645
Cdd:PRK10064 541 DEWKLSLNYTYNDGRDVSNGENKplSDLPFHTANGTLD-----WKPLALEDWSFYVSGNYtGQKRADSATAKTPGGYTIW 615
|
730 740
....*....|....*....|....*
gi 2316062834 646 DAAVGYKLPYG-RLNVAVANLLDKQ 669
Cdd:PRK10064 616 NTGAAWQVTKDvKLRAGVLNLGDKD 640
|
|
| PRK13484 |
PRK13484 |
IreA family TonB-dependent siderophore receptor; |
6-669 |
1.00e-13 |
|
IreA family TonB-dependent siderophore receptor;
Pssm-ID: 139605 [Multi-domain] Cd Length: 682 Bit Score: 74.66 E-value: 1.00e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 6 ALMPCVLIAPAYAQDDTTkkdeasgDEMVITASRSNIQQQKAPQVVTVITKEQIEQQ-MQVTSDSSQILSNLLPSFSPSR 84
Cdd:PRK13484 13 VMCSAVISSGYASSDKKE-------DTLVVTASGFTQQLRNAPASVSVITSEQLQKKpVSDLVDAVKDVEGISITGGNEK 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 85 QKMSGSGetFRGRAALVMIDGIPQSN-PLRPTGREMHTIDF----SMVERVEVIHGA-NATNGMGATGGVINIITRRPEN 158
Cdd:PRK13484 86 PDISIRG--LSGDYTLILVDGRRQSGrESRPNGSGGFEAGFippvEAIERIEVIRGPmSSLYGSDAIGGVINIITKPVNN 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 159 GSFNQHVNVQTTLPTEKIRGEtaSYKTTYRVDGR--EDYLdylfsigyenqGLYLDGNNRPVGVDNTQGDTMDSRAYDFM 236
Cdd:PRK13484 164 QTWDGVLGLGGIIQEHGKFGN--STTNDFYLSGPliKDKL-----------GLQLYGGMNYRKEDSISQGTPAKDNKNIT 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 237 GKVGYWLDDYQRIQLSVNRYNIKNE---NNYLSVDGIRSQGLPTTSVRGTprgeapHNSiwttgftyENHdlagmklSAL 313
Cdd:PRK13484 231 ATLQFTPTESQKFVFEYGKNNQVHTltpGESLDAWTMRGNLKQPNSKRET------HNS--------RSH-------WVA 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 314 LFNQRYEALFgaTNSSTFQDPAI-APRGSLYDQSRSVANKYGTKLALTKDDLLDDTLK-------ITVGFDTLYDKGKQD 385
Cdd:PRK13484 290 AWNAQGEILH--PEIAVYQEKVIrEVKSGKKDKYNHWDLNYESRKPEITNTIIDAKVTaflpenvLTIGGQFQHAELRDD 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 386 LYLTQRTYVPET-EYTNYSPFIQGEYQLLDNVTLHAGIR---HEIaklkVGDYqtlasnngvtvqggspkFNETLYnagI 461
Cdd:PRK13484 368 SATGKKTTETQSvSIKQKAVFIENEYAATDSLALTGGLRldnHEI----YGSY-----------------WNPRLY---A 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 462 IYAATDSLSLFANYSEGFGMP---DVGRALRTIKRSGVSLK--NFDgFKPIVTDNVETGFRFKRDK-FDFEASYY--ESK 533
Cdd:PRK13484 424 VYNLTDNLTLKGGIAKAFRAPsirEVSPGFGTLTQGGASIMygNRD-LKPETSVTEEIGIIYSNDSgFSASATLFntDFK 502
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 534 SKL-----GENVTESG-GVFLSER-QRTQIRGVEVTAGYQINEQHKVNASYAH--SEGKYDDNKDGKVDTKFNGLNIAPd 604
Cdd:PRK13484 503 NKLtsydiGTKDPVTGlNTFIYDNvGEANIRGVELATQIPVYDKWHVSANYTFtdSRRKSDDESLNGKSLKGEPLERTP- 581
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2316062834 605 RVIASWSANWN-DQWSSF-VQANY------AFSRSFDDAGLAFDGYLLMDAAVGYK-LPYGRLNVAVANLLDKQ 669
Cdd:PRK13484 582 RHAANAKLEWDyTQDITFySSLNYtgkqiwAAQRNGAKVPRVRNGFTSMDIGLNYQiLPDTLINFAVLNVTDRK 655
|
|
| Plug |
pfam07715 |
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ... |
44-148 |
2.49e-13 |
|
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain] Cd Length: 107 Bit Score: 66.52 E-value: 2.49e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 44 QQKAPQVVTVITKEQIEQQMqvTSDSSQILSNlLPSFSPSRQKMSGSGE-TFRG---RAALVMIDGIPQSNPlRPTGREM 119
Cdd:pfam07715 2 LRDTPGSVSVVTAEDIEDQG--ATNLADALRG-VPGVSVSSGGGGGGSSiSIRGfgsNRVLVLVDGVPLNSG-GGGSVDL 77
|
90 100 110
....*....|....*....|....*....|
gi 2316062834 120 HTIDFSMVERVEVIHGANAT-NGMGATGGV 148
Cdd:pfam07715 78 NSIDPEDIERVEVLKGPASAlYGSGAIGGV 107
|
|
| btuB |
PRK10641 |
TonB-dependent vitamin B12 receptor BtuB; |
3-160 |
1.26e-11 |
|
TonB-dependent vitamin B12 receptor BtuB;
Pssm-ID: 236730 [Multi-domain] Cd Length: 614 Bit Score: 67.71 E-value: 1.26e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 3 TLLALMPCVLIApAYAQDDttkkdeaSGDEMVITASRsnIQQQK----APqvVTVITKEQIEQqMQVTSdSSQILSNLlP 78
Cdd:PRK10641 6 SLLTALSVTAFS-GWAQDT-------SPDTLVVTANR--FQQPVstvlAP--TTVVTRDDIDR-WQSKS-VNDVLRRL-P 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 79 SFSPSRQkmSGSGET----FRG---RAALVMIDGIPQSNPLRPTGREMHTIDFSMVERVEVIHGA-NATNGMGATGGVIN 150
Cdd:PRK10641 71 GVDIAQN--GGLGQLsslfIRGtnsSHVLVLIDGVRLNQAGISGSADLSQIPISLVQRIEYIRGPrSAVYGSDAIGGVVN 148
|
170
....*....|
gi 2316062834 151 IITRRPENGS 160
Cdd:PRK10641 149 IITTRDKPGT 158
|
|
| PRK13486 |
PRK13486 |
TonB-dependent receptor; |
31-670 |
3.32e-10 |
|
TonB-dependent receptor;
Pssm-ID: 139606 [Multi-domain] Cd Length: 696 Bit Score: 63.50 E-value: 3.32e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 31 DEMVITASRSNIQQQKAPQVVTVITKEQIEqqmqvtSDSSQILSNLLPSFSPSRQKmSGSGET------FRGRAA---LV 101
Cdd:PRK13486 26 DVMIVSASGYEKKLTNAAASVSVISQEELQ------SSQYHDLAEALRSVEGVDVE-SGTGKTggleisIRGMPAsytLI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 102 MIDGIPQ--SNPLRPTGREMHTIDF----SMVERVEVIHGANAT-NGMGATGGVINIITRRPEN---GSFNQHVNVQTT- 170
Cdd:PRK13486 99 LIDGVRQggSSDVTPNGFSAMNTGFmpplAAIERIEVIRGPMSTlYGSDAMGGVVNIITRKNADkwlSSVNAGLNLQESn 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 171 ----------------LPTE---KIRGETASYK---TTYRVDGREDYLDYLFSIGYENQGLYLDGNNRPVGVDNTQGDTM 228
Cdd:PRK13486 179 kwgnssqfnfwssgplVDDSvslQVRGSTQQRQgssVTSLSDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 229 DSRAYDFMGKVGYWLDDYQRiqlsvnryNIKNENNYLSVdgirsqGLPTTSVRGTprgeaphnsiWTTGFTYENHDLAGM 308
Cdd:PRK13486 259 RQRYDNRDGQLGSLTGGYDR--------TLRYERNKISA------GYDHTFTFGT----------WKSYLNWNETENKGR 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 309 KLSALLFNQRYEALFGAtnsstfqdpaiaprgslyDQSRSVANKYGTKLALTKddlLDDTLKITVGFDTLYDKGKQDLYL 388
Cdd:PRK13486 315 ELVRSVLKRDKWGLAGQ------------------PRELKESNLILNSLLLTP---LGESHLVTVGGEFQSSSMKDGVVL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 389 --TQRTYvpetEYTNYSPFIQGEYQLLDNVTLHAGIRHEIAKLKVGDYqtlasnngvtvqggSPKfnetlynAGIIYAAT 466
Cdd:PRK13486 374 asTGETF----RQKSWSVFAEDEWHLTDALALTAGSRYEHHEQFGGHF--------------SPR-------AYLVWDVA 428
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 467 DSLSLFANYSEGFGMPDVGRALRTIkrSGVS-------LKNFDgFKPIVTDNVETGFrfkrdkfdfeasYYESKSKLGEN 539
Cdd:PRK13486 429 DAWTLKGGVTTGYKAPRMGQLHKGI--SGVSgqgktnlLGNPD-LKPEESVSYEAGV------------YYDNPAGLNAN 493
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 540 VT-----------------ESGGVFLSERQRTQirGVEVTAGYQI---NEQHKVNASYAHSEGKYDDNKDGK-------- 591
Cdd:PRK13486 494 VTgfmtdfsnkivsysindNTNSYVNSGKARLH--GVEFAGTLPLwseDVTLSLNYTWTRSEQRDGDNKGAPlsytpehm 571
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 592 VDTKFNgLNIAPDrvIASW-SANWNDQWSSFVQANYAFS----RSFDDAGLAFDGYLLMDAAVGYKLPYG-RLNVAVANL 665
Cdd:PRK13486 572 VNAKLN-WQITEE--VASWlGARYRGKTPRFTQNYSSLSavqkKVYDEKGEYLKAWTVVDAGLSWKMTDAlTLNAAVNNL 648
|
....*
gi 2316062834 666 LDKQY 670
Cdd:PRK13486 649 LNKDY 653
|
|
| PRK13513 |
PRK13513 |
ligand-gated channel protein; |
7-701 |
3.62e-09 |
|
ligand-gated channel protein;
Pssm-ID: 184104 [Multi-domain] Cd Length: 659 Bit Score: 59.78 E-value: 3.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 7 LMPCVLIAPAYAQDDTTKKDEASGDE--MVITASRSNIQQQKAPQVVTVITKEQIEQQM--QVTsDSSQILSNLLPSFSP 82
Cdd:PRK13513 10 KAALVIAAAISSQAYAAEKTNTATPTdtMVVTASGFQQRIQDAPASISVVTREQLENKAyrDVT-DALKDVPGVVVTGGG 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 83 SRQKMSgsgetFRGRAA---LVMIDGIPQ-SNPLRP----TGREMH-TIDFSMVERVEVIHGA-NATNGMGATGGVINII 152
Cdd:PRK13513 89 STSDIS-----IRGMAAkytLILVDGKRVdTRSTRPnsdgSGIEQGwLPPLAAIERIEVVRGPmSSLYGSDAMGGVINII 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 153 TRRPENGsFNQHVNVQTTLPTEKIRG---ETASYKTTYRVDGRedyldylfsIGYENQGLYldgNNRpvGVDNTQGDTMD 229
Cdd:PRK13513 164 TRKVQKE-WHGSLRADATLQEDSKSGdifQTNAYASGPLIDGL---------LGLKVSGLL---SHR--SEDKIIDGYNE 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 230 SRAYDFMGKVGYWLDDYQRIQLSVNRYNiknennylsvdgirsQGLPTTSvrGTPRGEAPHNSiwTTGFTYENHdlagmk 309
Cdd:PRK13513 229 QRMRNGTATFSLTPDDNNEFDFEIGRYV---------------QDRNSTP--GRTLALNGTNS--DTQYDRNNY------ 283
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 310 lsALLFNQRYEalFGATNSSTFQDPAIAPrgslydqSRSVanKYGTKLALTKDDLLDDTLKITVG----FDTLYDKGKQd 385
Cdd:PRK13513 284 --AITHNGYYD--FGNSTSYIQRDETRNP-------SRQM--KSVDTIFNTQTSFLLDDHTLSLGgqyrYEELYDKGNQ- 349
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 386 lyLTQRTYVPETEYTNYSPFIQGEYQLLDNVTLHAGIRHEIAKlkvgdyqtlasNNGVTVqggSPKfnetLYNagiIYAA 465
Cdd:PRK13513 350 --LPSASDLNKLTRWSWALFAEDEWQMTNDFALTGGIRMDQDQ-----------NYGTHW---TPR----LYG---VWHL 406
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 466 TDSLSLFANYSEGFGMPDV-------GRALRTIKRSGVSLKNFDgFKPIVTDNVETGFRF-KRDKF---------DFEAS 528
Cdd:PRK13513 407 ADQWTLKGGVSTGYRSPDLrqatdnwGQLTGGGGLPALILGNSD-LKPEKSISQEIGILWdNQENLnasvtlfntDFKDK 485
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 529 YYESK---SKLGENVTESGGV---FLSER---QRTQIRGVEVTAGYQINEQHKVNASYAHSEgkyDDNKDGkvdtKFNG- 598
Cdd:PRK13513 486 ITEVRncdTTNTDGQCVFNGInydFISDRinvDKANMRGVEATFNWDINQAWSLATNYTFTQ---SEQKSG----AFAGq 558
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 599 -LNIAPdRVIASWSANWN--DQWSSFVQANY------AFSRSfdDAGLAFDGYLLMDAAVGYKLPYG-RLNVAVANLLDK 668
Cdd:PRK13513 559 pLNQMP-KHMANATLNWQttEDFATWIRINYrgktseYLNRT--SMGSGTPSYTFVDLGASYQLTKElRLMGGVYNLLDK 635
|
730 740 750
....*....|....*....|....*....|...
gi 2316062834 669 QyITYYSQAGLNNNTRYfsgrgrtvTLGYSIDF 701
Cdd:PRK13513 636 R-VDIDVNDKVLDGRRY--------MVGASYDF 659
|
|
| PRK14050 |
PRK14050 |
TonB-dependent siderophore receptor; |
1-198 |
7.63e-04 |
|
TonB-dependent siderophore receptor;
Pssm-ID: 237595 [Multi-domain] Cd Length: 728 Bit Score: 42.87 E-value: 7.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 1 MRTLLALMPCVLIAPAYAQDDTT-------------KKDEASG--DEMVITA----SRSNIQQQKAPQVVTVITKeqieQ 61
Cdd:PRK14050 14 LAAGVALAALVLSGLVAAQEGNTtqletivveggnaASATATGpvDGYVAKAtatgSKTDTPITEIPQSVSVVGR----Q 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 62 QMQVTSDSSQILSNLLPSFSPSRQKMSGSGET----FRGRAAL---VMIDGIPqsnpLRPTGREMHTIDFSMVERVEVIH 134
Cdd:PRK14050 90 EMDDRGVTNKVDEALRYTPGVLSQPFGTDGDTdwfyIRGFDATqtgVFLDGLN----LFSYGFGGFQIDPFMLERVEVLK 165
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2316062834 135 G-ANATNGMGATGGVINIITRRPENGSF-------NQHVNVQTTLPT-EKIRGE-TASYKTTYRVDGREDYLDY 198
Cdd:PRK14050 166 GpASVLYGGSNPGGIVNMVSKRPLDEPLyyteigiNSYGNAFTGFDVgDKLSDDgTVRYRVTGKVAGGDNYSDY 239
|
|
| PRK10003 |
PRK10003 |
ferric-rhodotorulic acid outer membrane transporter; Provisional |
5-166 |
3.14e-03 |
|
ferric-rhodotorulic acid outer membrane transporter; Provisional
Pssm-ID: 236640 [Multi-domain] Cd Length: 729 Bit Score: 41.01 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 5 LALMPCVLIAPAYAQD-----------------DTTKKDEASGDEMVITasrsniqQQKAPQVVTVITKEQIE-QQMQVT 66
Cdd:PRK10003 26 LALLPSAAFAAPATEDtvivegsatapvddgeqDYSVKTTSAGTKMQMT-------QRDIPQSVSIVSQQRMEdQQLQTL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062834 67 SDssqILSNLLpsfSPSRQKMSGSGETFRGRAALV---MIDGIPQSNPLRPTGREMHTiDFSMVERVEVIHGANA-TNGM 142
Cdd:PRK10003 99 GE---VMENTL---GISKSQADSDRALYYSRGFQIdnyMVDGIPTYFESRWNLGDALS-DTALFERVEVVRGATGlMTGT 171
|
170 180
....*....|....*....|....
gi 2316062834 143 GATGGVINIITRRPENGSFNQHVN 166
Cdd:PRK10003 172 GNPSAAINMVRKHATSREFKGDVS 195
|
|
| |
