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Conserved domains on  [gi|2316062959|ref|WP_263059449|]
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APC family permease [Pectobacterium sp. F1-1]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857|GO:0015171|GO:0006865
PubMed:  23177982|24038584|25043943|10931886
SCOP:  4006243
TCDB:  2.A.3.1|2.A.3

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
10-442 5.61e-80

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 254.44  E-value: 5.61e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  10 AGAKRAQLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYA 89
Cdd:COG0531     2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  90 QKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAI 169
Cdd:COG0531    82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 170 MAVFLGLVIHgvylgegAGTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGG 249
Cdd:COG0531   162 LLLFIVVGLF-------AFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 250 VIFVAVAYFLQLYFPDiSRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPeRFF 329
Cdd:COG0531   235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 330 GYIHPKWRTPALNVLLVGVIALSAVSF---DLVTATALINFGALVAFTFVNLSVISQFYIRERRNRTVKdtINFLVLPVL 406
Cdd:COG0531   313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2316062959 407 GALTVGALWVNLEASSMTLGLVWATIGLLYLAFVTR 442
Cdd:COG0531   391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
10-442 5.61e-80

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 254.44  E-value: 5.61e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  10 AGAKRAQLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYA 89
Cdd:COG0531     2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  90 QKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAI 169
Cdd:COG0531    82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 170 MAVFLGLVIHgvylgegAGTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGG 249
Cdd:COG0531   162 LLLFIVVGLF-------AFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 250 VIFVAVAYFLQLYFPDiSRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPeRFF 329
Cdd:COG0531   235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 330 GYIHPKWRTPALNVLLVGVIALSAVSF---DLVTATALINFGALVAFTFVNLSVISQFYIRERRNRTVKdtINFLVLPVL 406
Cdd:COG0531   313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2316062959 407 GALTVGALWVNLEASSMTLGLVWATIGLLYLAFVTR 442
Cdd:COG0531   391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 17-439 1.13e-33

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 131.41  E-value: 1.13e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  17 LKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPH 96
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGKAGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGEL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  97 VGFMVGWSSLLDYL----------------FMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNS 160
Cdd:TIGR00909  81 TAFIIGWSLWLEYGvavaavavgwggylqeFLPGVGLDLPAVLTAKPGNGGVFNLPALLIVLFLTYILYLGAKESGKVND 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 161 IIVVVQVAIMAVFLGLVIHGVylgegagTLTSTRPFWSENAHVVpmITGATILCFSFLGFDGISSLSEETQDAGRVIPKA 240
Cdd:TIGR00909 161 ILVVLKVAALLLFAALGAIHF-------ASNNYTPFMPMGFGGV--GAATALVFFAFIGFEAISTAAEEVKNPERDIPKA 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 241 IFLTALIGGVIFVAVAYFLQLYFPdISRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGR 320
Cdd:TIGR00909 232 IILSLIVVTLLYVLVAAVILGAVP-WRQLAGSTAPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 321 DGVFPeRFFGYIHPKWRTPALNVLLVGVIALSAVSFDLVTATA-LINFGALVAFTFVNLSVIsqfyIRERRNRTVKDTIN 399
Cdd:TIGR00909 311 DGLLP-GSLSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAeLTSIGTLIAFAAVNVAVI----ILRRRRPDIQRAFR 385

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 2316062959 400 FLVLPVLGALTVGA---LWVNLEASSMTLGLVWATIGL-LYLAF 439
Cdd:TIGR00909 386 CPLVPVLPVLVVSYciyLLLNLGPGTTVWFLVWMLLGSvFYFIY 429
AA_permease pfam00324
Amino acid permease;
26-390 7.18e-22

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 97.78  E-value: 7.18e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  26 VVMMGLAYMQPMTIFdtFGIVSGL-TDGHVAT--AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVG 102
Cdd:pfam00324   2 VQMIALGGVIGTGLF--VGSGSVLgQAGPAGAllGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 103 WSSLLDYLFMPMINILLAKIYLE--AIFPGVPS-WIFVAALVGLMTLFNLRGINLVANLN---SIIVVVQVAIMAVFLGL 176
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQfwELVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEfwfALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 177 VIHGVYLGEGAGTLTSTRPFWSEN---AHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGVIFV 253
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGKNNfppGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 254 AVAYFLQLYFPD-----ISRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPeRF 328
Cdd:pfam00324 240 LSLLAIGLLVPWndpglLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAP-KF 318

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2316062959 329 FGYIhPKWRTPALNVLLVGVIA-LSAVSFDLVTATALINFGALVAF-TFVNLSVISQFYIRERR 390
Cdd:pfam00324 319 LKKV-DKRGVPLRAILVSMVISlLALLLASLNPAIVFNFLLAISGLsGLIVWGLISLSHLRFRK 381
frlA PRK11357
amino acid permease;
16-351 1.79e-13

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 72.20  E-value: 1.79e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  16 QLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTA--LSYGKLVKRFPSAGSAYTYAQKAI 93
Cdd:PRK11357    5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPqmCVYAELSTAYPENGADYVYLKNAG 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  94 SPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWI---FVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIM 170
Cdd:PRK11357   85 SRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLgkfIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 171 AVFLGLvihGVYLGEGAGTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGV 250
Cdd:PRK11357  165 TIVIGL---GIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 251 IFVAVAYFLQLYFPdISRFKEPDASQPEIMLYVA--GKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFpERF 328
Cdd:PRK11357  242 LYTLLALVISGLMP-FDKLANSETPISDALTWIPalGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLF-FKC 319

                         330       340
                  ....*....|....*....|...
gi 2316062959 329 FGYIHPKWRTPALNVLLVGVIAL 351
Cdd:PRK11357  320 FGHVHPKYNTPDVSIILQGALGI 342
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
10-442 5.61e-80

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 254.44  E-value: 5.61e-80
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  10 AGAKRAQLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYA 89
Cdd:COG0531     2 SRGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  90 QKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAI 169
Cdd:COG0531    82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 170 MAVFLGLVIHgvylgegAGTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGG 249
Cdd:COG0531   162 LLLFIVVGLF-------AFDPANFTPFLPAGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVG 234

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 250 VIFVAVAYFLQLYFPDiSRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPeRFF 329
Cdd:COG0531   235 VLYILVSLALTGVVPY-DELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLP-KVF 312

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 330 GYIHPKWRTPALNVLLVGVIALSAVSF---DLVTATALINFGALVAFTFVNLSVISQFYIRERRNRTVKdtINFLVLPVL 406
Cdd:COG0531   313 AKVHPRFGTPVNAILLTGVIALLLLLLgaaSFTALASLASVGVLLAYLLVALAVIVLRRRRPDLPRPFR--VPLPLIPIL 390

                         410       420       430
                  ....*....|....*....|....*....|....*.
gi 2316062959 407 GALTVGALWVNLEASSMTLGLVWATIGLLYLAFVTR 442
Cdd:COG0531   391 GILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRR 426
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
 17-439 1.13e-33

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 131.41  E-value: 1.13e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  17 LKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPH 96
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGKAGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGEL 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  97 VGFMVGWSSLLDYL----------------FMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNS 160
Cdd:TIGR00909  81 TAFIIGWSLWLEYGvavaavavgwggylqeFLPGVGLDLPAVLTAKPGNGGVFNLPALLIVLFLTYILYLGAKESGKVND 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 161 IIVVVQVAIMAVFLGLVIHGVylgegagTLTSTRPFWSENAHVVpmITGATILCFSFLGFDGISSLSEETQDAGRVIPKA 240
Cdd:TIGR00909 161 ILVVLKVAALLLFAALGAIHF-------ASNNYTPFMPMGFGGV--GAATALVFFAFIGFEAISTAAEEVKNPERDIPKA 231

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 241 IFLTALIGGVIFVAVAYFLQLYFPdISRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGR 320
Cdd:TIGR00909 232 IILSLIVVTLLYVLVAAVILGAVP-WRQLAGSTAPLSLVGYDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 321 DGVFPeRFFGYIHPKWRTPALNVLLVGVIALSAVSFDLVTATA-LINFGALVAFTFVNLSVIsqfyIRERRNRTVKDTIN 399
Cdd:TIGR00909 311 DGLLP-GSLSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAeLTSIGTLIAFAAVNVAVI----ILRRRRPDIQRAFR 385

                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 2316062959 400 FLVLPVLGALTVGA---LWVNLEASSMTLGLVWATIGL-LYLAF 439
Cdd:TIGR00909 386 CPLVPVLPVLVVSYciyLLLNLGPGTTVWFLVWMLLGSvFYFIY 429
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
 16-447 8.78e-24

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 104.13  E-value: 8.78e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  16 QLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDG-HVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAIS 94
Cdd:TIGR00906  25 KMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGpAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVG 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  95 PHVGFMVGWSSLLDYL-------------FMPMINILLA---KIYLEAIFPGVPSW--IFVAALVGLMTLFNLRGINLVA 156
Cdd:TIGR00906 105 ELWAFITGWNLILEYVigtaavarswsayFDELLNKQIGqfrRTYFKLNYDGLAEYpdFFAVCLILLLAVLLSFGVKESA 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 157 NLNSIIVVVQVAIMAVFL--GLVIHGVYL-----GEGAGTLTstrPFWSENAhvvpmITGATILCFSFLGFDGISSLSEE 229
Cdd:TIGR00906 185 WVNKIFTAINILVLLFVIiaGFTKADVANwsiteEKGAGGFM---PYGFTGV-----LSGAATCFFAFIGFDAIATTGEE 256

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 230 TQDAGRVIPKAIFLTALIGGVIFVAVAYFLQLYFPdiSRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHA 309
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMP--YYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMF 334

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 310 GVSRLMYVMGRDGVFPeRFFGYIHPKWRTPALNVLLVGVI-ALSAVSFDLVTATALINFGALVAFTFVNLSVISQFY--- 385
Cdd:TIGR00906 335 PLPRVIYAMARDGLLF-KWLAQINSKTKTPINATVVSGAIaALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYqpg 413

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 386 -------------IRERRNRTVKDTINF--------LVLP-VLGALTVGALWVNLEASSMTLGLVWATIGLLYLAFVTRS 443
Cdd:TIGR00906 414 lvydqakdtdekdTLDSWVPFTSKSESQsegfslrtLFSGlILGLSILTTYGRAAIAEEAWSIALLTLFLVLFLLVVLTI 493


                  ....
gi 2316062959 444 FRQP 447
Cdd:TIGR00906 494 WRQP 497
AA_permease pfam00324
Amino acid permease;
26-390 7.18e-22

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 97.78  E-value: 7.18e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  26 VVMMGLAYMQPMTIFdtFGIVSGL-TDGHVAT--AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVG 102
Cdd:pfam00324   2 VQMIALGGVIGTGLF--VGSGSVLgQAGPAGAllGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATG 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 103 WSSLLDYLFMPMINILLAKIYLE--AIFPGVPS-WIFVAALVGLMTLFNLRGINLVANLN---SIIVVVQVAIMAVFLGL 176
Cdd:pfam00324  80 WNYWLSWITVLALELTAASILIQfwELVPDIPYlWVWGAVFLVLLTIINLVGVKWYGEAEfwfALIKIIAIIGFIIVGII 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 177 VIHGVYLGEGAGTLTSTRPFWSEN---AHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGVIFV 253
Cdd:pfam00324 160 LLSGGNPNDGAIFRYLGDNGGKNNfppGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFYI 239

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 254 AVAYFLQLYFPD-----ISRFKEPDASQPEIMLYVAGKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPeRF 328
Cdd:pfam00324 240 LSLLAIGLLVPWndpglLNDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAP-KF 318

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2316062959 329 FGYIhPKWRTPALNVLLVGVIA-LSAVSFDLVTATALINFGALVAF-TFVNLSVISQFYIRERR 390
Cdd:pfam00324 319 LKKV-DKRGVPLRAILVSMVISlLALLLASLNPAIVFNFLLAISGLsGLIVWGLISLSHLRFRK 381
AA_permease_2 pfam13520
Amino acid permease;
60-392 9.28e-20

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 91.22  E-value: 9.28e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  60 FALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDY-LFMPMINILLAKIYLEAIFPGVPSW---- 134
Cdd:pfam13520  39 AAIIFSLAVGLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYvLGLASSASVAASYLLSALGPDLVPTtwlt 118

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 135 -IFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIMAVFLGLVihGVYLGEGAGTLTSTRPFWSENAHVVP-MITGATI 212
Cdd:pfam13520 119 yGIAIAILIIFAIINIRGVRESAKIQNILGILKLLLPLILIIIL--GLVTADGGGFNLLSGEWHTFFPDGWPgVFAGFLG 196

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 213 LCFSFLGFDGISSLSEETQDagRVIPKAIFLTALIGGVIFVAVAYFLQLYFPDISRFKEPDASQPEIMLY--VAGKFFQS 290
Cdd:pfam13520 197 VLWSFTGFESAANVSEEVKK--RNVPKAIFIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVAALLFqaVGGKWGAI 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 291 VILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPE-RFFGYIHpKWRTPALNVLLVGV---IALSAVSFDLVTATALIN 366
Cdd:pfam13520 275 IVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFsRFFAKVN-KFGSPIRAIILTAIlslILLLLFLLSPAAYNALLS 353

                         330       340
                  ....*....|....*....|....*.
gi 2316062959 367 FGALVAFTFVNLSVISQFYIRERRNR 392
Cdd:pfam13520 354 LSAYGYLLSYLLPIIGLLILRKKRPD 379
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
57-414 8.99e-15

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 75.93  E-value: 8.99e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  57 AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIF 136
Cdd:COG1113    53 SYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVW 132

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 137 VAALVGLMTLFNLRGINLVANLN---SII-VVVQVAIMAVFLGLVIHGVYLGEGAGT----LTSTRPFWsenAH-VVPMI 207
Cdd:COG1113   133 ALVFLVLLTAINLLSVKLFGEFEfwfALIkVVAIVAFIVVGLLLIFFGFGLPGGPPAglsnLWDHGGFF---PNgIGGVL 209

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 208 TGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTAL------IGGVIFVAVAYFLQLYFPDISRFKEpdasqpeiML 281
Cdd:COG1113   210 AALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSVIWrillfyVGSLFVILALVPWNQIGAGGSPFVT--------VF 281

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 282 YVAGKFFQSVILVFSCVTVLASGM-AAHAGVSRLMYVMGRDGVFPeRFFGYIHPKwRTPALNVLLVGVIALSAV------ 354
Cdd:COG1113   282 SLLGIPAAAGIMNFVVLTAALSSLnSGLYSTSRMLYSLAERGDAP-KFFGKLSKR-GVPVRAILLSAVVLLIGVvlnyll 359

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2316062959 355 ---SFDLVTATALinFGALVAFTFVnlsVISQFYIRERRNRTVKDTINFLVL--PVLGALTVGAL 414
Cdd:COG1113   360 pekAFTFLLSISG--FGALFVWLMI---LVSQLKFRRRLPREGAAALKFKMPgfPYTSYLTLAFL 419
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
57-387 2.25e-14

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 74.82  E-value: 2.25e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  57 AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIF 136
Cdd:COG0833    51 AYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIW 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 137 VAALVGLMTLFNLRGINLVANLN---SIIVVVQVAIMAVFLGLVIHGVYLGEGAGT---LTSTRPFwseNAHVVPMITGA 210
Cdd:COG0833   131 SLLFLALIFLLNALSVKAFGESEfwfSLIKVITVIAFIIVGLLMIFGIIGGHAPGFsnfTTGDGPF---PGGFLAILGVM 207

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 211 TILCFSFLGFDGISSLSEETQDAGRVIPKAIfLTALIGGVIFVAVAYF-LQLYFPdisrFKEPDASQP-------EIMLY 282
Cdd:COG0833   208 MIVGFSFQGTELIGIAAGESENPEKTIPKAI-RQVFWRILLFYILAIFvIAALIP----YTDAGVAESpftlvfeRAGIP 282

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 283 VAGKFFQSVIL--VFSCVTvlaSGMAAhagVSRLMYVMGRDGVFPeRFFGYIHPKwRTPALNVLLVGVIALSAVSFDLVT 360
Cdd:COG0833   283 YAADIMNAVILtaVLSAGN---SGLYA---STRMLWSLAKEGMAP-KIFAKLNKR-GVPLNALLATMAVGLLALLSSFFG 354

                         330       340       350
                  ....*....|....*....|....*....|..
gi 2316062959 361 A----TALINFGALVAFtFVNLSV-ISQFYIR 387
Cdd:COG0833   355 AgtvyLWLLSISGLTGF-IAWLGIaISHYRFR 385
frlA PRK11357
amino acid permease;
16-351 1.79e-13

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 72.20  E-value: 1.79e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  16 QLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTA--LSYGKLVKRFPSAGSAYTYAQKAI 93
Cdd:PRK11357    5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVLAFVIGGLIVIPqmCVYAELSTAYPENGADYVYLKNAG 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  94 SPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWI---FVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIM 170
Cdd:PRK11357   85 SRPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLLgkfIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPF 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 171 AVFLGLvihGVYLGEGAGTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGV 250
Cdd:PRK11357  165 TIVIGL---GIFWFKAENFAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLV 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 251 IFVAVAYFLQLYFPdISRFKEPDASQPEIMLYVA--GKFFQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFpERF 328
Cdd:PRK11357  242 LYTLLALVISGLMP-FDKLANSETPISDALTWIPalGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLF-FKC 319

                         330       340
                  ....*....|....*....|...
gi 2316062959 329 FGYIHPKWRTPALNVLLVGVIAL 351
Cdd:PRK11357  320 FGHVHPKYNTPDVSIILQGALGI 342
PRK10836 PRK10836
lysine transporter; Provisional
 57-330 2.98e-12

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 68.31  E-value: 2.98e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  57 AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIF 136
Cdd:PRK10836   54 SYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIW 133

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 137 VAALVGLMTLFN---LRGINLVANLNSIIVVVQVAIMAVFLGLVIHGVYLG-EGAGTLTST---RPFWSENAhvvPMITG 209
Cdd:PRK10836  134 SALFLGVIFLLNyisVRGFGEAEYWFSLIKVTTVIVFIIVGVLMIIGIFKGaEPAGWSNWTigdAPFAGGFA---AMIGV 210

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 210 ATILCFSFLGFDGISSLSEETQDAGRVIPKAI---FLTALIGGVIFVAVAYFLQLYF-PDISRFKEPDASQPEIMLYVAG 285
Cdd:PRK10836  211 AMIVGFSFQGTELIGIAAGESEDPAKNIPRAVrqvFWRILLFYVFAILIISLIIPYTdPSLLRNDVKDISVSPFTLVFQH 290

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2316062959 286 KFFQSVILVFSCV---TVLASGMAAHAGVSRLMYVMGRDGVFPeRFFG 330
Cdd:PRK10836  291 AGLLSAAAVMNAViltAVLSAGNSGMYASTRMLYTLACDGKAP-RIFA 337
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
 5-414 4.16e-12

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 67.85  E-value: 4.16e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959   5 SQLPNAGAKRAQLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTdGHVATAYAFALVAILFT---ALSYGKLVKRFPS 81
Cdd:TIGR00911  28 SASTVDGGEAVALKKEITLLSGVGIIVGTIIGSGIFVSPKGVLKNA-GSVGLALIMWAVCGIFSivgALVYAELGTTIPK 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  82 AGSAYTYAQKAISPHVGFMVGWSSLldYLFMP----MINILLAKIYLEAIFPG--VPSW-IFVAALVGLMTLFNLRGINL 154
Cdd:TIGR00911 107 SGGEYNYILEVFGPLLAFLRLWIEL--LVIRPgsqaVNALNFAIYILTPVFPDceVPEWaIRLVAVLCVLLLTLVNCLSV 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 155 VANLNSIIVVVQVAIMAVFLGLVIHGVYLGEGA-GTLTSTRPFWSENAHVVPMITGATILCFSFLGFDGISSLSEETQDA 233
Cdd:TIGR00911 185 KWATRVQDIFTACKLLALLLIIITGWVQLGKGGvESLNPKNAFEGTETSAGGIVLAFYSGIWAYGGWNYLNFVTEEVKNP 264

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 234 GRVIPKAIF--LTALIGGVIFVAVAYFLQLyfpdisrfkepdasQPEIML---YVAGKFFQSVILVFSCVTVLASGMAAH 308
Cdd:TIGR00911 265 YRTLPIAIIisMPIVTFIYVLTNIAYFTVL--------------SPEELLaslAVAVDFGERLLGVMSWAMPALVGLSCF 330

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 309 AGV-------SRLMYVMGRDGVFPERFFgYIHPKWRTPALNVLLV-GVIALSAVSFDLVTataLINFGALVAFTFVNLSV 380
Cdd:TIGR00911 331 GSVngslfssSRLFFVGGREGHLPSLLS-MIHVKRLTPLPSLLIVcTLTLLMLFSGDIYS---LINLISFANWLFNALAV 406

                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 2316062959 381 ISQFYIRERR---NRTVKDTINFLVLPVLGALTVGAL 414
Cdd:TIGR00911 407 AGLLWLRYKRpemNRPIKVPLFFPVFFLLSCLFLIIL 443
PRK10249 PRK10249
phenylalanine transporter; Provisional
 54-241 5.77e-12

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 67.32  E-value: 5.77e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  54 VATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPS 133
Cdd:PRK10249   56 VLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPT 135

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 134 WIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIMAVFLGLVIHGVYLGEGaGTLTSTRPFWSENAHVVP----MITG 209
Cdd:PRK10249  136 WIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHG-GEKASIDNLWRYGGFFATgwngLILS 214

                         170       180       190
                  ....*....|....*....|....*....|..
gi 2316062959 210 ATILCFSFLGFDGISSLSEETQDAGRVIPKAI 241
Cdd:PRK10249  215 LAVIMFSFGGLELIGITAAEARDPEKSIPKAV 246
PRK11021 PRK11021
putative transporter; Provisional
 57-328 8.86e-12

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 66.47  E-value: 8.86e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  57 AYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWsslldyLFMPMI------NILLAKIYLEAIFPg 130
Cdd:PRK11021   37 AWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGW------LFLSVIpvglpaALQIAAGFGQALFG- 109

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 131 VPSWIFVAA---LVGLMTLFNLRGINLVANLNSIIVVVQVAIMAVFLGLVihgvylGEGAGTLTSTRPfwsENAHVVPMI 207
Cdd:PRK11021  110 WSSWQLLLAellTLALLWLLNLRGASSSANLQTVIALLIVALVVAIWWAG------DIKPADIPFPAP---GSIEWSGLF 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 208 TGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGVIFVAVAyFLQLYFPDISRFKEPDASQPEIMLYVAGKF 287
Cdd:PRK11021  181 AALGVMFWCFVGIEAFAHLASEFKNPERDFPRALMIGLLLAGLVYWACT-VVVLHFPAYGDKQAAAASLPGIFVQLFGGY 259

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2316062959 288 FQSVILVFSCVTVLASGMAAHAGVSRLMYVMGRDGVFPERF 328
Cdd:PRK11021  260 ALWVICVIGYLACFASVNIYTQSFARLVWSQAREGRPPSYL 300
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
 57-386 6.40e-10

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 61.15  E-value: 6.40e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  57 AYAFALVAILFTALSYGKLVKRFPSAGSAYT-YAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWI 135
Cdd:TIGR00913  41 GYAIMGSIIYCVMQSLGEMATFYPVVSGSFAtYASRFVDPAFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAV 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 136 FVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIMavfLGLVIHGVYLGEGAGtltSTRPF-----WSENAHVVPMITG- 209
Cdd:TIGR00913 121 WIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAI---IGFIILSIILNCGGG---PNHGYigfryWHDPGAFAGGTIGg 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 210 -----ATILCFSFLGFDGISSL---SEETQDAGRVIPKAIFLTALIGGVIFVAVAYFLQLYFP-------DISRFKEPDA 274
Cdd:TIGR00913 195 rfkgvCSVFVTAAFSFGGTELValtAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIGFLVPyndprllSSSSSSDSAA 274

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 275 SQPEIMLYVAG-----KFFQSVILvFSCVTVLASGMAAHagvSRLMYVMGRDGVFPeRFFGYIHpKWRTPALNVL---LV 346
Cdd:TIGR00913 275 SPFVIAIQNHGikvlpHIFNAVIL-ISVLSAANSSLYAS---SRTLYALAHQGLAP-KIFAYVD-RRGVPYVAVIvssLF 348

                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2316062959 347 GVIALSAVSfdlvtatalinFGALVAFT-FVNLSVISQFYI 386
Cdd:TIGR00913 349 GLLAFLAVS-----------KKEAEVFTwLLNISGLSGFFT 378
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
 14-373 3.52e-09

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 58.60  E-value: 3.52e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  14 RAQLKRTLTLWPVVMMGLAYMQPMTIFDTFGIVSGLTDGHVATAYAFALVAI--LFTALSYGKLVKRFPSAGSAYtYAQK 91
Cdd:TIGR00907   7 KPELKREFSLWSIFGFAFSISNSWTGISTTYNYGLSSGGAMSIVWGWIIAGAgsICIALSLAELSSAYPTSGGQY-FWSA 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  92 AIS-----PHVGFMVGWSSLL---------DYLFMPMINILLAKIYLEAIFPGVPSWIFV--AALVGLMTLFN---LRGI 152
Cdd:TIGR00907  86 KLApprqmPFASWMTGWFNLAgqvagtastDLSVAQLILGIVSLTTPGREYIPTRWHIFGimIGIHLIHALINslpTKWL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 153 NLVANLNSII-VVVQVAIMAVFLGLVIHGVYLGEGAGT--LTSTRPFWSEN-AHVVPMITGAtilcFSFLGFDGISSLSE 228
Cdd:TIGR00907 166 PRITSSAAYWsLLGFLTICITLLACKSPKFNDGKFVFTnfNNSTGGWKPGGfAFLLGLLNPA----WSMTGYDGTAHMAE 241

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 229 ETQDAGRVIPKAIFLTALIG---GVIFVAVAYFLqlyFPDISRFKEPDASQP--EIMLYVAGKFFQS-VILVFSCVTVLA 302
Cdd:TIGR00907 242 EIENPEVVGPRAIIGAVAIGivtGFCFNIVLFFS---MGDIDSLISSTTGQPiaQIFYNALGNKAGAiFLLCLILVTSFF 318

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2316062959 303 SGMAAHAGVSRLMYVMGRDGVFP-ERFFGYIHPKWRTPALNVLLVGVIalsavsfdlVTATALINFGALVAF 373
Cdd:TIGR00907 319 CAITCMTANSRMIYAFSRDGGLPfSPLWSRVNPRTQVPLNAVWLSAVW---------IILIGLLGLGSSTAF 381
PRK10238 PRK10238
aromatic amino acid transporter AroP;
58-240 4.80e-09

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 58.04  E-value: 4.80e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  58 YAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFV 137
Cdd:PRK10238   51 YAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSA 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 138 AALVGLMTLFNLRGINLVANLN---SIIVVVQVAIMAVFLGLVIhgvyLGEGAGTLTSTRPFWSENAHVVPMITG----A 210
Cdd:PRK10238  131 AVFFVVINAINLTNVKVFGEMEfwfAIIKVIAVVAMIIFGGWLL----FSGNGGPQATVSNLWDQGGFLPHGFTGlvmmM 206

                         170       180       190
                  ....*....|....*....|....*....|
gi 2316062959 211 TILCFSFLGFDGISSLSEETQDAGRVIPKA 240
Cdd:PRK10238  207 AIIMFSFGGLELVGITAAEADNPEQSIPKA 236
PRK15049 PRK15049
L-asparagine permease;
54-264 2.45e-08

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 56.17  E-value: 2.45e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  54 VATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLE--AIFPGV 131
Cdd:PRK15049   63 LALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAMTGIVDITAVALYMHywGAFGGV 142

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 132 PSWIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVaiMAVFLGLVIHGVYLGEGAGTLTSTRPFW--SENA-----HVV 204
Cdd:PRK15049  143 PQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKV--LAIVTFLVVGTVFLGSGQPLDGNTTGFHliTDNGgffphGLL 220

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 205 PMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGVIFVAVAYFLQLYFP 264
Cdd:PRK15049  221 PALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLP 280
proY PRK10580
putative proline-specific permease; Provisional
 54-450 1.60e-07

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 53.28  E-value: 1.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  54 VATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPS 133
Cdd:PRK10580   44 VLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPH 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 134 WIFVAALVGLMTLFNLRGINLVANLN---SIIVVVQVAIMAVF-LGLVIHGVylGEGaGTLTSTRPFWSENAH----VVP 205
Cdd:PRK10580  124 WIWVLSVVLIICAVNLMSVKVFGELEfwfSFFKVATIIIMIVAgIGIIIWGI--GNG-GQPTGIHNLWSNGGFfsngWLG 200

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 206 MITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTALIGGVIFVAVAYFLQLYFPdisrFKEPDASQPEIMLYVA- 284
Cdd:PRK10580  201 MVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYP----WNQVGTNGSPFVLTFQh 276

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 285 -GKFFQSVILVFSCVTVLASGMAAHA-GVSRLMYVMGRDGVFPERFFGYihPKWRTPALNVLLVGVIALSAVSFD-LVTA 361
Cdd:PRK10580  277 mGITFAASILNFVVLTASLSAINSDVfGVGRMLHGMAEQGSAPKIFSKT--SRRGIPWVTVLVMTTALLFAVYLNyIMPE 354

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 362 TALINFGALVAFTFVNLSVISQFYIRERRNRTVKDTINFLVLPVLGALTVGALWVNLEA-------------SSMTLGLV 428
Cdd:PRK10580  355 NVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLVfiigligyhpdtrISLYVGFA 434

                         410       420
                  ....*....|....*....|..
gi 2316062959 429 WATIGLLYLAFVTRSFRQPVPQ 450
Cdd:PRK10580  435 WIVLLLIGWMFKRRHDRQLAEA 456
PRK10746 PRK10746
putative transport protein YifK; Provisional
 54-184 2.93e-07

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 52.51  E-value: 2.93e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  54 VATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPS 133
Cdd:PRK10746   45 VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQ 124

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 134 WIFVAALVGLMTLFNLRGINLVANL---------NSIIVVVQVAIMAVFLGLVIHGVYLG 184
Cdd:PRK10746  125 WIPALIAVALVALANLAAVRLYGEIefwfamikvTTIIVMIVIGLGVIFFGFGNGGQSIG 184
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
 95-392 4.06e-07

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 52.04  E-value: 4.06e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  95 PHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLNSIIVVVQ-VAIMA-V 172
Cdd:PRK11049   96 PWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKiVAIVAlI 175

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 173 FLGLVIHGVYLGEGAGTLTSTRPFWSENAhVVPM-----ITGATILCFSFLGFDGISSLSEETQDAGRVIPKAI------ 241
Cdd:PRK11049  176 VVGLVMVAMHFQSPTGVEASFAHLWNDGG-MFPKglsgfFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAInsipir 254

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 242 ----FLTALIggvIFVAVAYFLQLyFPDISRFKEpdasqpeiMLYVAGKFFQSVILVFSCVTVLASgmAAHAGV---SRL 314
Cdd:PRK11049  255 iimfYVFALI---VIMSVTPWSSV-VPDKSPFVE--------LFVLVGLPAAASVINFVVLTSAAS--SANSGVfstSRM 320

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 315 MYVMGRDGVFPERFFGYihPKWRTPALNV------LLVGVIALSAVSfDLVTATALINFGALVAFTFVnLSVISQFYIRE 388
Cdd:PRK11049  321 LFGLAQEGVAPKAFAKL--SKRAVPAKGLtfscicLLGGVVLLYVNP-SVIGAFTLVTTVSAILFMFV-WTIILCSYLVY 396


                  ....
gi 2316062959 389 RRNR 392
Cdd:PRK11049  397 RKQR 400
PRK11387 PRK11387
S-methylmethionine permease;
15-390 2.37e-05

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 46.38  E-value: 2.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  15 AQLKRTLTLWPVVMMGLA-YMQPMTIFDTFGIVSGLTDGHVATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAI 93
Cdd:PRK11387   10 GQFKRTMKVRHLVMLSLGgVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAARYL 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  94 SPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPSWIFVAALVGLMTLFNLRGINLVANLN---SIIVVVQVAIM 170
Cdd:PRK11387   90 GPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEfwfSLIKVVTILAF 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 171 AVFLGLVIHGVY-LGEGA---GTLTSTRPFWSENAhVVPMITGATILCFSFLGFDGISSLSEETQDAGRVIPKAIFLTAL 246
Cdd:PRK11387  170 IVLGGAAIFGFIpMQDGSpapGLRNLTAEGWFPHG-GLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIA 248

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 247 IGGVIFVAVAYFLQLYFP--DISRFKEPDASQPE-IMLYVAGKFFQSVILVfSCVTVLASGMAAHAgvsRLMYVMGRDGV 323
Cdd:PRK11387  249 RLVIFFVGTVLVLAALIPmqQAGVEKSPFVLVFEkVGIPYAADIFNFVILT-AILSAANSGLYASG---RMLWSLSNEGT 324

                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2316062959 324 FPERFFGYIHPKWRTPALNV-LLVGVIAL--SAVSFDLV-TATALINFGALVAftfVNLSVISQFYIRERR 390
Cdd:PRK11387  325 LPACFARLTKRGIPLTALSVsMLGGLLALfsSVVAPDTVfVALSAISGFAVVA---VWLSICASHFMFRRR 392
PRK10197 PRK10197
GABA permease;
54-388 5.68e-05

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 45.38  E-value: 5.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  54 VATAYAFALVAILFTALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMVGWSSLLDYLFMPMINILLAKIYLEAIFPGVPS 133
Cdd:PRK10197   27 VLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPI 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 134 WIFVAALVGLMTLFNLRGINLVANLNSIIVVVQVAIMAVFLGLVIHGVYLGEGAGTLTSTRPFWSENAHVV----PMITG 209
Cdd:PRK10197  107 WLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPngfgAVLSA 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 210 ATILCFSFLGFDGISSLSEETQDAGRVIPKA-------IFLTALIGGVIFVAVAYFLQLYFPDISRFKepdaSQPEIMLY 282
Cdd:PRK10197  187 MLITMFSFMGAEIVTIAAAESDTPEKHIVRAtnsviwrISIFYLCSIFVVVALIPWNMPGLKAVGSYR----SVLELLNI 262

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 283 VAGKFFQSVILVFSCVTVLASGMAAhagVSRLMYVMGRDGVFPErFFGYIHpKWRTPALNVLLVGVIALSAVSFDLVTAT 362
Cdd:PRK10197  263 PHAKLIMDCVILLSVTSCLNSALYT---ASRMLYSLSRRGDAPA-VMGKIN-RSKTPYVAVLLSTGAAFLTVVVNYYAPA 337

                         330       340       350
                  ....*....|....*....|....*....|.
gi 2316062959 363 ALINF-----GALVAFTFVNLSViSQFYIRE 388
Cdd:PRK10197  338 KVFKFlidssGAIALLVYLVIAV-SQLRMRK 367
PRK10644 PRK10644
arginine/agmatine antiporter;
69-259 9.85e-03

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 38.23  E-value: 9.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959  69 ALSYGKLVKRFPSAGSAYTYAQKAISPHVGFMvgwSSLLDYLFMPMINILLAKI---YLEAIFPGVP----SWIFVAALV 141
Cdd:PRK10644   57 SMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQ---TNVLYWLACWIGNIAMVVIgvgYLSYFFPILKdplvLTITCVVVL 133

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2316062959 142 GLMTLFNLRGINLVANLNSIIVV---VQVAIMAV-----FLGLVIHGVYLGEGAGTLTSTRpfwsenahvvpmitgaTIL 213
Cdd:PRK10644  134 WIFVLLNIVGPKMITRVQAVATVlalIPIVGIAVfgwfwFRGETYMAAWNVSGLGTFGAIQ----------------STL 197

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2316062959 214 CFSFLGFDGISSLSEEtqdAGRVI-PKAIFLTALIGGVIFVAVAYFL 259
Cdd:PRK10644  198 NVTLWSFIGVESASVA---AGVVKnPKRNVPIATIGGVLIAAVCYVL 241
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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