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Conserved domains on  [gi|2318476672|ref|WP_263535598|]
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sulfate ABC transporter permease subunit CysW [Paucibacter sp. TC2R-5]

Protein Classification

sulfate ABC transporter permease( domain architecture ID 10790587)

sulfate ABC transporter permease is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter that is involved in the transport of sulfate

Gene Ontology:  GO:0015419|GO:0043190|GO:0140359|GO:0042626|GO:0016020
PubMed:  25750732|24638992|18535149|17723295
TCDB:  3.A.1

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 22-295 0e+00

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


:

Pssm-ID: 443356  Cd Length: 281  Bit Score: 532.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  22 NPATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAA 101
Cdd:COG4208     8 RSATTEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLVFGVAAA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 102 WAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPL 181
Cdd:COG4208    88 WAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVARELIPL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 182 MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQF 261
Cdd:COG4208   168 MQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYNF 247

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2318476672 262 AAAFAVASILALLALVTLILKQFVEWRAHSTVKE 295
Cdd:COG4208   248 VAAFAVASLLALLALVTLVLKTLLEWRTARRLAA 281
 
Name Accession Description Interval E-value
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 22-295 0e+00

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 532.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  22 NPATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAA 101
Cdd:COG4208     8 RSATTEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLVFGVAAA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 102 WAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPL 181
Cdd:COG4208    88 WAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVARELIPL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 182 MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQF 261
Cdd:COG4208   168 MQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYNF 247

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2318476672 262 AAAFAVASILALLALVTLILKQFVEWRAHSTVKE 295
Cdd:COG4208   248 VAAFAVASLLALLALVTLVLKTLLEWRTARRLAA 281
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 31-291 1.17e-138

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 391.75  E-value: 1.17e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  31 VRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFR 110
Cdd:TIGR02140   1 VRYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 111 GKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEE 190
Cdd:TIGR02140  81 GKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 191 EAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASI 270
Cdd:TIGR02140 161 EAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASL 240

                         250       260
                  ....*....|....*....|.
gi 2318476672 271 LALLALVTLILKQFVEWRAHS 291
Cdd:TIGR02140 241 LALLALVTLVLKAILERRQGR 261
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
29-288 2.98e-104

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 305.52  E-value: 2.98e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  29 PWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHD 108
Cdd:PRK11602   16 NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVNLVFGILLAWLVTRFN 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 109 FRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRD 188
Cdd:PRK11602   96 FPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQ 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 189 EEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVA 268
Cdd:PRK11602  176 EDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAA 255

                         250       260
                  ....*....|....*....|
gi 2318476672 269 SILALLALVTLILKQFVEWR 288
Cdd:PRK11602  256 ALLTLMAIITLFLKSMLQWR 275
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 79-276 5.68e-24

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 96.19  E-value: 5.68e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  79 LKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGpwlqandIKIIFA 158
Cdd:cd06261     1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWG-------ILPGLG 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 159 VPGIVLATIFVtFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVS 238
Cdd:cd06261    74 LPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2318476672 239 GHIRGQTNTLPLHVEILYNEYQFAAAFAVASILALLAL 276
Cdd:cd06261   153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 82-248 6.78e-16

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 74.12  E-value: 6.78e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  82 TLIAAAIAVPLnlvfgvsAAWaIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWlqandiKIIFAVPG 161
Cdd:NF038017    9 TLIAALIGIPL-------GAL-LALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 162 IVLATIFVTFPFVARelIPLMQAQGRDEE--EAATVLGATGWQTFWRVtLPNVKWGLLYGVILCNARAMGEFGAVSVVSG 239
Cdd:NF038017   75 MIIAQAVLALPIVAG--LTLAAVQGLDPElrLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAVMMVGG 151


                  ....*....
gi 2318476672 240 HIRGQTNTL 248
Cdd:NF038017  152 NIRGYTRVL 160
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 94-286 1.89e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 47.29  E-value: 1.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  94 LVFGVSAAwaiAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFgpwlqandikiiFAVPGIVLATIFVTFPF 173
Cdd:pfam00528   2 IPLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILG------------HGILPAIILALLGWAGY 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 174 VARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVsGHIRGQTNTLPLHVE 253
Cdd:pfam00528  67 ARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAIL 145

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2318476672 254 ILYNEYQFAAAFAVASILALLALVTLILKQFVE 286
Cdd:pfam00528 146 GYDYPEIQGPVLAAALILLLLNLLVDILQRLLD 178
 
Name Accession Description Interval E-value
CysW COG4208
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 22-295 0e+00

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 443356  Cd Length: 281  Bit Score: 532.00  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  22 NPATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAA 101
Cdd:COG4208     8 RSATTEPPWVRWLLIGLALLFLALFLVLPLAAVFAEAFSKGWGAYLAALTDPDALSAIRLTLLVAAIAVPLNLVFGVAAA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 102 WAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPL 181
Cdd:COG4208    88 WAITRFEFRGKRLLITLIDLPFSVSPVVAGLIYVLLFGAQGWFGPWLEAHDIKIIFAVPGIVLATIFVTFPFVARELIPL 167

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 182 MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQF 261
Cdd:COG4208   168 MQEQGTDEEEAALTLGASGWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYNF 247

                         250       260       270
                  ....*....|....*....|....*....|....
gi 2318476672 262 AAAFAVASILALLALVTLILKQFVEWRAHSTVKE 295
Cdd:COG4208   248 VAAFAVASLLALLALVTLVLKTLLEWRTARRLAA 281
permease_CysW TIGR02140
sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two ...
 31-291 1.17e-138

sulfate ABC transporter, permease protein CysW; This model represents CysW, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysT (TIGR02139). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 162725  Cd Length: 261  Bit Score: 391.75  E-value: 1.17e-138
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  31 VRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFR 110
Cdd:TIGR02140   1 VRYLLISLALGLLFLLLLLPLALIFQEAFEKGFGVFFAAISDPDALSAIKLTLLVALIVVPLNTVFGVCAAWVLTRFQFP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 111 GKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEE 190
Cdd:TIGR02140  81 GKRLLLTIIDLPFSVSPVVAGLIFVLLYGSQGWLGPWLEDLDIKIIFSLPGIVLATMFVTCPFVARELIPVMEEQGTEQE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 191 EAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASI 270
Cdd:TIGR02140 161 EAALTLGASWWQTFWRVTLPNIKWGLLYGVILCNARAMGEFGAVSVVSGHIRGKTNTLPLHVELLYNEYQSYAAFAAASL 240

                         250       260
                  ....*....|....*....|.
gi 2318476672 271 LALLALVTLILKQFVEWRAHS 291
Cdd:TIGR02140 241 LALLALVTLVLKAILERRQGR 261
cysW PRK11602
sulfate/thiosulfate ABC transporter permease CysW;
29-288 2.98e-104

sulfate/thiosulfate ABC transporter permease CysW;


Pssm-ID: 183225  Cd Length: 283  Bit Score: 305.52  E-value: 2.98e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  29 PWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHD 108
Cdd:PRK11602   16 NWGKWFLIGIGMLVSAFILVVPMIYIFVQAFSKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVNLVFGILLAWLVTRFN 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 109 FRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRD 188
Cdd:PRK11602   96 FPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQLMFSWPGMVLVTIFVTCPFVVRELVPVMLSQGSQ 175

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 189 EEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVA 268
Cdd:PRK11602  176 EDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEFGAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAA 255

                         250       260
                  ....*....|....*....|
gi 2318476672 269 SILALLALVTLILKQFVEWR 288
Cdd:PRK11602  256 ALLTLMAIITLFLKSMLQWR 275
3a0106s02 TIGR00969
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ...
 23-288 1.58e-100

sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]


Pssm-ID: 273370  Cd Length: 271  Bit Score: 295.42  E-value: 1.58e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  23 PATREAPWVRY-LLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAA 101
Cdd:TIGR00969   5 PSARFRFIKWGkLSLGIALLYVFLILILPVAALFVQAFSKGLGQFWQNATDPIAVSAYNLTLLMALIAVPLNGVFGLLIA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 102 WAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPL 181
Cdd:TIGR00969  85 WVLTRYQFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIQIIFTWPGMALAMIFVSLPFVVREVQPV 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 182 MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQF 261
Cdd:TIGR00969 165 LEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGNIPGKTLTLPLLIEERLEQYDY 244

                         250       260
                  ....*....|....*....|....*..
gi 2318476672 262 AAAFAVASILALLALVTLILKQFVEWR 288
Cdd:TIGR00969 245 PGAYVIAAVLLLVSLVTLFLINALQAR 271
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 33-289 6.74e-76

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 232.72  E-value: 6.74e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  33 YLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGK 112
Cdd:COG0555    10 GLTLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGK 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 113 HLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEA 192
Cdd:COG0555    90 RLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGIKVAFTPLGIVLAQTFVSLPFVVRTVQPVLEELDPELEEA 169

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 193 ATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASILA 272
Cdd:COG0555   170 AATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGNLPMKTEILPLLIYLKLEEGDYAGATAIALVLL 249

                         250
                  ....*....|....*..
gi 2318476672 273 LLALVTLILKQFVEWRA 289
Cdd:COG0555   250 LISFLLLLLINLLQRRS 266
cysT CHL00187
sulfate transport protein; Provisional
 34-259 2.68e-58

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 186.76  E-value: 2.68e-58
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  34 LLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKH 113
Cdd:CHL00187   12 SIYIISLSYIIFLLVLPILALLIKASQQPWSDFLQKATEPIALSAYSLTLSMALIAALINGFFGLLIAWVLVRYNFPGKR 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 114 LLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAA 193
Cdd:CHL00187   92 LLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIQIVFTKLGVLLAMIFVSFPFVVRTIQPVLQEIEKELEEAA 171

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2318476672 194 TVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEY 259
Cdd:CHL00187  172 WSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEYGSIVIISSNIPFKDLVASVLIFQSLEQY 237
permease_CysT TIGR02139
sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two ...
 36-289 2.60e-56

sulfate ABC transporter, permease protein CysT; This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions]


Pssm-ID: 131194  Cd Length: 265  Bit Score: 182.52  E-value: 2.60e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  36 LTLGLS--FFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKH 113
Cdd:TIGR02139   7 LSLGVTltYLSLIVLLPLAALFLKASQLGWAGFWQIITEPRVLAAYKLSFGTALIAALINAVFGTLLAWVLVRYRFPGKR 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 114 LLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAA 193
Cdd:TIGR02139  87 IVDALVDLPFALPTAVAGIALATLYSPNGWIGSFLAPLGIKIAFTPLGIVIALVFVSLPFVVRTVQPVLEEIEKELEEAA 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 194 TVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASILAL 273
Cdd:TIGR02139 167 ASLGASRWQTFWRVILPALLPALLTGFALAFARAVGEYGSVIFIAGNLPMKTEIAPLLIFQKLEQYDYAGATAIASVMLI 246

                         250
                  ....*....|....*.
gi 2318476672 274 LALVTLILKQFVEWRA 289
Cdd:TIGR02139 247 ISFVILLFINLLQWWA 262
ModB COG4149
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ...
 73-289 6.77e-54

ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis


Pssm-ID: 443320 [Multi-domain]  Cd Length: 223  Bit Score: 174.85  E-value: 6.77e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  73 ADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQAN- 151
Cdd:COG4149     3 PEDWSALWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLEELf 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 152 DIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEF 231
Cdd:COG4149    83 GISLVFTWTGAVLASVVVSLPLMVQPLRAAFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEF 162

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2318476672 232 GAVSVVSGHIRGQTNTLPLHVeilYNEYQ---FAAAFAVASILALLALVTLILKQFVEWRA 289
Cdd:COG4149   163 GATLMFAGNIPGKTQTLPLAI---YDAVEagdYAAAHALSLILLAISFVVLLLLNLLNRRR 220
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
36-279 1.12e-50

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 168.39  E-value: 1.12e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  36 LTLGLS--FFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKH 113
Cdd:PRK10971   15 LSLGTSllFVCLILLLPLSALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRYRFPGRT 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 114 LLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAA 193
Cdd:PRK10971   95 LLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAA 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 194 TVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASILAL 273
Cdd:PRK10971  175 ETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILA 254


                  ....*.
gi 2318476672 274 LALVTL 279
Cdd:PRK10971  255 ASLLLL 260
modB_ABC TIGR02141
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ...
 81-288 3.29e-44

molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]


Pssm-ID: 273993 [Multi-domain]  Cd Length: 208  Bit Score: 149.32  E-value: 3.29e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  81 LTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFAVP 160
Cdd:TIGR02141   2 LSLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLELFGISLVFTFT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 161 GIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGH 240
Cdd:TIGR02141  82 GAVLASVIVSFPLMVQPIRAAFEAVDPDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGATLMFAGN 161

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|
gi 2318476672 241 IRGQTNTLPLHVeilYNEYQ--FAAAFAVASILALLALVTLILKQFVEWR 288
Cdd:TIGR02141 162 IPGETQTIPLAI---YDAVEsdYELAHQLSLVLLAISLIVLLLVELLNKR 208
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 60-281 6.58e-43

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 146.77  E-value: 6.58e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  60 RKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFG 139
Cdd:TIGR01581   4 RLGGSHILSALTDPENIKALRLSLATSLASLLLAVIIGIPTAYVLARVRFPLKKLLDTLLDLPMVLPPLVAGLALLLLFG 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 140 AQGWFGPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYG 219
Cdd:TIGR01581  84 RNGLLGPYLEAAGIQVIFSTLGVVLAQTFVASPYYVRVARSTFKSVDPRYEDVARSLGAGPLETFRKITLPMARPGLLAG 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2318476672 220 VILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAAAFAVASILALLALVTLIL 281
Cdd:TIGR01581 164 LVLAWARALGEFGATLMFAGSIQGKTRTLPLAIYLNIQSDNIEAAVASALLLLVIAFLLLLV 225
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
25-281 1.86e-39

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 144.53  E-value: 1.86e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  25 TREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAI 104
Cdd:COG1178     2 STRPRRRPRLLLLLLALLLALLVLLPLLALLLRAFTDGLANFWALLSDPYLWRALGNTLLLALLVTLLSLLLGVPLAWLL 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 105 AKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQAN---DIKIIFAVPGIVLATIFVTFPFVARELIPL 181
Cdd:COG1178    82 ARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGPNGLLNTLLRALfglEPPDIYGLGGIILVLVLFNYPYVYLLLRAA 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 182 MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVvsghIRGQTNTLPlhVEI---LYNE 258
Cdd:COG1178   162 LRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLV----LGGGYTTLT--TAIyqaWLGD 235

                         250       260
                  ....*....|....*....|...
gi 2318476672 259 YQFAAAFAVASILALLALVTLIL 281
Cdd:COG1178   236 FDLGAAAALALVLLLLVLLLLLL 258
modB PRK09421
molybdate ABC transporter permease subunit;
77-290 1.28e-33

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 122.72  E-value: 1.28e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  77 SALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQAN-DIKI 155
Cdd:PRK09421    9 QAVLLSLKVSSVAVLFSLPFGILVAWLLARCRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWfGISF 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 156 IFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVS 235
Cdd:PRK09421   89 AFSWRGAALAAAVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGATI 168

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2318476672 236 VVSGHIRGQTNTLPLHVeilyneYQF-------AAAFAVASILALLALVTLILKQFVEWRAH 290
Cdd:PRK09421  169 TFVSNIPGETQTIPSAM------YTLiqtpggeSAAARLCIISIAIALASLLLSEWLARRSR 224
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 34-289 1.02e-31

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 118.29  E-value: 1.02e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  34 LLLTLGLSFFALFLVMPLVAVFSEALRKGWDV-----------YLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAW 102
Cdd:COG1177     7 LLLRLFLALVLLFLYLPILVLVLYSFNDSWFLtfppegftlrwYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPAAL 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 103 AIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLqandikiifavpGIVLATIFVTFPFVARELIPLM 182
Cdd:COG1177    87 ALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLW------------GLILAHVVFTLPFVVLVVLARL 154

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 183 QAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGhirGQTNTLPLhveILYNEYQFA 262
Cdd:COG1177   155 QGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAG---PGVTTLPV---YIYSMIRRG 228

                         250       260       270
                  ....*....|....*....|....*....|
gi 2318476672 263 A---AFAVASILALLALVTLILKQFVEWRA 289
Cdd:COG1177   229 IspeINALSTLLILLSLLLLLLAERLRRRG 258
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
15-281 2.80e-31

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 122.19  E-value: 2.80e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  15 TGGRYQDNPATREAPWvRYLLLTLGLSFFALFLVMPLVAVFSEALRKG------WDVYLAALVEADAVSALKLTLIAAAI 88
Cdd:COG1178   271 VGGRARRPRRVKLGRW-RWLALALCLLLVLLGLLLPLLALLLWSLTKAlddnltLDNYRFVLLDPSLLRALLNSLLLALL 349

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  89 AVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAqgWFGPWLQAndikiifAVPGIVLATIF 168
Cdd:COG1178   350 AALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNR--PLPLLLYG-------TLAILVLAYVV 420

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 169 VTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSghiRGQTNTL 248
Cdd:COG1178   421 RFLPFALRSLEAALAQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLR---PPGFETL 497

                         250       260       270
                  ....*....|....*....|....*....|...
gi 2318476672 249 PLHVEILYNEYQFAAAFAVASILALLALVTLIL 281
Cdd:COG1178   498 AVLIYQLASSGRYGEAAALALLLVLVSLLPVLL 530
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 24-282 1.00e-29

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 113.70  E-value: 1.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  24 ATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRK-----------GWDVYLAALVEADAVSALKLTLIAAAIAVPL 92
Cdd:COG1176     3 AALRRRLRPLLLLLPALLWLLLFFVLPLLLLLVYSFTTrdpyggvvpgfTLENYARLFTDPLYLKVLLRTLWIALLTTLI 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  93 NLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQA-----NDIKIIFAVPGIVLATI 167
Cdd:COG1176    83 CLLLGYPIAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAWIVLLGRNGLLNSLLLAlglidEPLRLLYTEFAVVIGLV 162

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 168 FVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGhirGQTNT 247
Cdd:COG1176   163 YVYLPFMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGG---GKVLM 239

                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2318476672 248 LPLHVE---ILYNEYQFAAAFAVASILALLALVTLILK 282
Cdd:COG1176   240 IGNLIYqqfLSALNWPLAAALAVVLLLIVLLVLLLYLR 277
UgpA COG1175
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
30-288 4.55e-24

ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440788 [Multi-domain]  Cd Length: 298  Bit Score: 98.67  E-value: 4.55e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  30 WVRYLLLTLGLSFFALFLVMPLVAVFSEALRK-----------GWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGV 98
Cdd:COG1175    18 LAAYLFLLPALLLLLVFVLYPLLYTLYLSFTDwnllgpppefvGLDNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  99 SAAWAIAKhDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQ--------GWFG----PWLQANDikiiFAVPGIVLAT 166
Cdd:COG1175    98 LLALLLNR-KLRGRGFFRTLFFLPWVISPVVVALIWKWLFNPDygllnallGALGlepiNWLGDPS----LALPAVIIVT 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 167 IFVTFPFVAreLIPL--MQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVV-SGHIRG 243
Cdd:COG1175   173 VWKGTGFNM--LIFLagLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLtGGGPGN 250

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2318476672 244 QTNTLPLHV---EILYNEYQFAAAFAVASILALLALVTLILKQFVEWR 288
Cdd:COG1175   251 STTTLVLYIyqtAFQQFDFGYASAIAVVLFLIILVLTLLQLRLLRRRE 298
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 79-276 5.68e-24

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 96.19  E-value: 5.68e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  79 LKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGpwlqandIKIIFA 158
Cdd:cd06261     1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWG-------ILPGLG 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 159 VPGIVLATIFVtFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVS 238
Cdd:cd06261    74 LPALILALLLI-APFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLG 152

                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2318476672 239 GHIRGQTNTLPLHVEILYNEYQFAAAFAVASILALLAL 276
Cdd:cd06261   153 GGEAPGPGTGLLLIFAILFPGDLGVAAAVALILLLLSL 190
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 30-288 9.91e-18

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 83.19  E-value: 9.91e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  30 WVRYLLLTLGLSFFALFLVMPLVAVFSEAL--RKGWDVYLAALVEADAVSAL--------KLTLIAAAIAVPLNLVFgvs 99
Cdd:TIGR03262   1 LIARLLLAGMILALLLFLLLPLLALLTKSVydSDGDFIGLANFAEYFATPGLlqslgnslTVSAIVTAIVVPLAFAF--- 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 100 aAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIkiiFAVPGIVLATIFVTFPFVARELI 179
Cdd:TIGR03262  78 -AYALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLLGGFSI---YGFWGIVIGEVFYTFPHALMILV 153

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 180 PLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSghirGQTNTLPLHV-EILYNE 258
Cdd:TIGR03262 154 TALSLADGRLYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIG----GDYNVLATDIyKQVIGQ 229

                         250       260       270
                  ....*....|....*....|....*....|
gi 2318476672 259 YQFAAAFAVASILALLALVTLILKQFVEWR 288
Cdd:TIGR03262 230 QNFPMGAVVGVLLLLPALLAFGIDRAIQRR 259
ABC_perm1 NF038017
ABC transporter permease; Proteins of this family are the permease subunit of an ABC ...
 82-248 6.78e-16

ABC transporter permease; Proteins of this family are the permease subunit of an ABC transporter complex, which may be involved in tungstate uptake.


Pssm-ID: 411610 [Multi-domain]  Cd Length: 184  Bit Score: 74.12  E-value: 6.78e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  82 TLIAAAIAVPLnlvfgvsAAWaIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWlqandiKIIFAVPG 161
Cdd:NF038017    9 TLIAALIGIPL-------GAL-LALRRFPGRRLVISLLNTLMGLPPVVVGLIVYLLLSRSGPLGFL------GLLYTPTA 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 162 IVLATIFVTFPFVARelIPLMQAQGRDEE--EAATVLGATGWQTFWRVtLPNVKWGLLYGVILCNARAMGEFGAVSVVSG 239
Cdd:NF038017   75 MIIAQAVLALPIVAG--LTLAAVQGLDPElrLQILSLGATRWQALWTL-LKEARFALLAAVLAGFGRAISEVGAVMMVGG 151


                  ....*....
gi 2318476672 240 HIRGQTNTL 248
Cdd:NF038017  152 NIRGYTRVL 160
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 82-290 7.79e-14

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 70.37  E-value: 7.79e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  82 TLIAAAIAVPlnlvfgVSAAWAIAKHDF---RGKHLLITFIDLPFSVSPVVAGLVYVLLFGA--QGWFGPWLQANDIKII 156
Cdd:TIGR02138  72 SLIALLIAVP------VGIGIAIFLSEIapkRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPflKPHFQPFLGSNLGLIP 145

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 157 FAVPGIVLATIFVT---FPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGA 233
Cdd:TIGR02138 146 LFGGPILTAGIVLAimiLPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMA 225

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 234 VSVVSGH--------IRGQTNTLPLHVEILYNE-----YQFAAAFAVASILALLALVTLILKQFVEWRAH 290
Cdd:TIGR02138 226 VTMVIGNvfpisplsLFDPGTTITSLIANQFGEasggsVHTSALFALGLVLFVITLLVNILARYIVRRRR 295
PRK15050 PRK15050
2-aminoethylphosphonate transport system permease PhnU; Provisional
 23-276 1.41e-13

2-aminoethylphosphonate transport system permease PhnU; Provisional


Pssm-ID: 237888 [Multi-domain]  Cd Length: 296  Bit Score: 69.65  E-value: 1.41e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  23 PATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLAA----LVEADAVSALKLTLIAAAIAVPLNLVFGV 98
Cdd:PRK15050   15 AARRRRRLRPLLWLLLPLLVLAPLVVYPLVRVVLQSLTGEHGLGLATyravLGSPDFRGALLTTLQIAFASTAGCLVLGV 94

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  99 SAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQ------ANDIKIIFAVPGIVLATIFVTFP 172
Cdd:PRK15050   95 LLALVLAFVPFPGASLVGRFIDTFVAFPSFLITLAFTFLYGSAGSVNIALQrlfgleAPPLDFLYSPGGVILAEITFYTP 174

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 173 FVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGhirGQTNTLPLHV 252
Cdd:PRK15050  175 FVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGA---KDVVTLPVLI 251

                         250       260
                  ....*....|....*....|....*..
gi 2318476672 253 E---ILYNEYQFAAAFAVASILALLAL 276
Cdd:PRK15050  252 YskaIVDFDYPTACAIAVVNLALSLGL 278
UgpE COG0395
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ...
 24-213 3.85e-13

ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];


Pssm-ID: 440164 [Multi-domain]  Cd Length: 282  Bit Score: 68.20  E-value: 3.85e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  24 ATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALRKG----------------WDVYLAALVEADAVSALKLTLIAAA 87
Cdd:COG0395     5 ARRRRRRLGRILLYLLLILLALLFLFPLYWMVVTSFKPPaeifsgppsllpseftLENYRAAFTDGPFGRYLLNSLIVAV 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  88 IAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLqandikiifavpGIVLATI 167
Cdd:COG0395    85 VSTVLSLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLGLLNTYW------------GLILPYL 152

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2318476672 168 FVTFPF-----------VARELiplmqaqgrdeEEAATVLGATGWQTFWRVTLPNVK 213
Cdd:COG0395   153 AFGLPFgifllrqffrsIPREL-----------EEAARIDGASEFRIFWRIVLPLSK 198
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 81-280 1.76e-09

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 56.97  E-value: 1.76e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  81 LTLIAAAIAVPLnlvfGVSAAWAIAKHDFRGK--HLLITFIDLPFSVSPVVAGL----VYVLLFGAQgwfgpwlqandiK 154
Cdd:COG0581    49 LVLLATLIAVPL----GVLAAIYLAEYARGGRlaRLIRFAIDVLAGVPSIVYGLfgyaLFVLTLGLG------------F 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 155 IIFAVpGIVLAtiFVTFPFVAR------ELIPlmqaqgRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAM 228
Cdd:COG0581   113 SLLAG-ALALA--LLMLPVVIRtteealRLVP------NSLREASYALGATKWQTIRKVVLPAALPGILTGVILAIARAA 183

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 229 GE-------FGAVSVVSGHIRGQTNTLPLHVEILYNEYQFAA-AFAVASILALLALVTLI 280
Cdd:COG0581   184 GEtapllftAGVSPFLPLSLFDPFATLPVHIYNLASSPYPAAqELAWAAALVLLLLVLLL 243
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 29-277 3.73e-09

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 57.15  E-value: 3.73e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  29 PWVRyLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLA--ALVEADAVSaLKLTLIAAAIAVplnlVFGVSAAWAIAK 106
Cdd:PRK09433  275 LWSR-LWDGLLIVLALLLLLPPLLAVVVSGLNASLLRVLAqpALWQALWTS-LRIALAAALLAV----VLTMMLLWSSRE 348

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 107 HDFRGKHLLITFIDLPFSVSPVVAGLVYvllfgAQGWFgpwLQANDIKIIFAVPGIVLATI--FVTFPFVARELIPLMQA 184
Cdd:PRK09433  349 LRLRQRKLAAQALELSGMLILAMPGIVL-----ATGLF---LLLRNTTDLPASALGIVILTnaLMALPYALRVLEPPMRD 420

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 185 QGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGhirGQTNTLPLHVEILYNEYQFAAA 264
Cdd:PRK09433  421 IAARYGRLCQSLGIRGWSRLRLIELRALRRPLAQAFAFACALSLGDFGVIALFGS---QDFRTLPFLLYQQLGSYRSQDA 497

                         250
                  ....*....|...
gi 2318476672 265 FAVASILALLALV 277
Cdd:PRK09433  498 AVTALLLLLLCLL 510
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 82-288 4.97e-09

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 56.25  E-value: 4.97e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  82 TLIAAAIAVPLnlvfGVSAAWAIAKH-DFRGKHLLITFIDLPFSVSPVVAGLvyvllFGAQgWFGPWLQANdikIIFAVP 160
Cdd:COG0573    86 SLIALLIAVPL----GLGIAIFLSEYaPPRLRRILKPAIELLAGIPSVVYGF-----WGLF-VLVPLLRDL---FPWPPS 152

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 161 GI-VLATIFV----TFPFVA---RELiplMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFG 232
Cdd:COG0573   153 GFsLLTAGIVlaimILPTITslsRDA---LRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETM 229

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2318476672 233 AVSVVSG-------HIRGQTNTLPLHV-----EILYNEYQFAAAFAVASILALLALVTLILKQFVEWR 288
Cdd:COG0573   230 AVLMVAGnapqipfSLFDPGRTLTALIalefgEAPFGSLHYSALFALGLVLFVITLLVNLLARLIVRR 297
thiP PRK09433
thiamine transporter membrane protein; Reviewed
 32-210 6.04e-09

thiamine transporter membrane protein; Reviewed


Pssm-ID: 181853 [Multi-domain]  Cd Length: 525  Bit Score: 56.77  E-value: 6.04e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  32 RYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDvylAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRG 111
Cdd:PRK09433    2 WLIPGVLAAALLVALALLALLALWLHAPGGDWD---AVWQDSYLWHVLRFSFWQAFLSALLSVLPAIPLARALYRRRFPG 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 112 KHLLITFIDLPFsVSPVVAGLVYVL-LFGAQGWFGPWLQANDIKI---IFAVPGIVLATIFVTFPFVAR------ELIPL 181
Cdd:PRK09433   79 RGLLLRLCAMTL-VLPVLVAVFGLLsVYGRSGWLAQLLQALGLEWpfsIYGLQGILLAHVFFNLPLATRlllqalESIPA 157

                         170       180
                  ....*....|....*....|....*....
gi 2318476672 182 MQAQgrdeeeAATVLGATGWQTFWRVTLP 210
Cdd:PRK09433  158 EQRQ------LAAQLGMRGWQFFRLVEWP 180
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 42-282 2.28e-08

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 54.16  E-value: 2.28e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  42 FFALFLVMPLVAVFSEALRKG---------WDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGK 112
Cdd:TIGR00974  10 LSALLALLPLIWILWYILIKGlpalnleffTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYANGSR 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 113 HL-LITF-IDLPFSVSPVVAGLVYVLLFGAQGWFGPwlqandikiiFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEE 190
Cdd:TIGR00974  90 FTkIIRFaVDILAGVPSIVVGLFGYGFFVLTYLGGG----------FSLLAGALALALLILPVIIRTTEEALKAVPKDLR 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 191 EAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSG-------HIRGQTNTLPLHV-----EILYNE 258
Cdd:TIGR00974 160 EASLALGATKWQTIFKVVLPAALPGILTGIILSIARAAGETAPLLFTAGgsaftppNLFDPFATLPVLIynlasEGPYVE 239

                         250       260
                  ....*....|....*....|....*..
gi 2318476672 259 YQ---FAAAFAVASILALLALVTLILK 282
Cdd:TIGR00974 240 AQqlaWAAALVLIVLVLLLNLIARLLR 266
COG4132 COG4132
ABC-type uncharacterized transport system, permease component [General function prediction ...
 24-280 2.60e-08

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443307 [Multi-domain]  Cd Length: 286  Bit Score: 54.04  E-value: 2.60e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  24 ATREAPWVRYLLLTLGLSFFALFLVMPLVAVFSEALR---KGWDV-YLAALVEADAVSALKLTLIAAAIAVPLNLVFGVS 99
Cdd:COG4132     6 RRRRRKWLAWLGLLPFFLFVLLFLLLPTVWVVIGAFQdddGGFTLaNYAELTSPFYLQAFWNSIWLSLASALIGAVIGLL 85

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 100 AAWAIAK-HDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKI-----IFAVPGIVLATIFVTFPF 173
Cdd:COG4132    86 LAYALRRgGPGWLRRAVLAFSGVASNFAGVPLAFAFIATLGRNGLVTLLLKQLGIDLydgfnLYSFWGLILVYLYFQIPL 165

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 174 VARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEF--------GAVSVVSGHIRGQt 245
Cdd:COG4132   166 MVLLLYPALDGLRREWREAAALLGASRWQYWRRVALPVLAPSLLGTFLLLFANAFGAYatayaltgGNYNLVPIRIGAL- 244

                         250       260       270
                  ....*....|....*....|....*....|....*
gi 2318476672 246 ntlpLHVEILYNEyQFAAAFAVASILaLLALVTLI 280
Cdd:COG4132   245 ----ISGDVLLDP-NLGAALALGMIV-IMALVMAL 273
MalG COG3833
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ...
 30-231 6.16e-08

ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];


Pssm-ID: 443045 [Multi-domain]  Cd Length: 282  Bit Score: 52.85  E-value: 6.16e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  30 WVRYLLLTLgLSFFALFlvmPLVAVFSEALRKG--------------WDVYLAALVEADAVSALKLTLIAAAIAVPLNLV 95
Cdd:COG3833    16 GLRHLVLII-LAIIALF---PILWVVSASFNPGgslyssslipenftLENYKKLFTETPFLRWFLNSLIVAVVTAIISVF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  96 FGVSAAWAIAKHDFRGKHLLITFIdLPFSVSPVVAGLV--YVLLfgaqgwfgpwLQANDIK-----IIFAVPGIVLATIF 168
Cdd:COG3833    92 LAALAAYAFSRFRFKGRKAGLLAL-LLLQMFPAFLALValYLLL----------SALGLLNtllglILVYLGGAIPFNTW 160

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2318476672 169 VTFPFVarELIPlmqaqgRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEF 231
Cdd:COG3833   161 LMKGYF--DTIP------KELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDF 215
potB PRK09497
spermidine/putrescine ABC transporter membrane protein; Reviewed
 86-231 1.27e-07

spermidine/putrescine ABC transporter membrane protein; Reviewed


Pssm-ID: 181910  Cd Length: 285  Bit Score: 52.00  E-value: 1.27e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  86 AAIAVPLNLVFGVSAAWAIAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQAND-----IKIIFAVP 160
Cdd:PRK09497   72 ALIATLACLVLGYPFAWFLAKLPHKVRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGvidtpIRIMFTES 151

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2318476672 161 GIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEF 231
Cdd:PRK09497  152 AVIIGLVYILLPFMVLPLYSSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMF 222
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 94-286 1.89e-06

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 47.29  E-value: 1.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  94 LVFGVSAAwaiAKHDFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFgpwlqandikiiFAVPGIVLATIFVTFPF 173
Cdd:pfam00528   2 IPLGIIAA---LRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILSILG------------HGILPAIILALLGWAGY 66

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 174 VARELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVsGHIRGQTNTLPLHVE 253
Cdd:pfam00528  67 ARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFL-GSWPGLGLLLIEAIL 145

                         170       180       190
                  ....*....|....*....|....*....|...
gi 2318476672 254 ILYNEYQFAAAFAVASILALLALVTLILKQFVE 286
Cdd:pfam00528 146 GYDYPEIQGPVLAAALILLLLNLLVDILQRLLD 178
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 40-279 8.80e-06

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 46.84  E-value: 8.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  40 LSFFALFLVMPLVAVFSEALRKGW-----DVYLAALVeadavsalKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHL 114
Cdd:TIGR01253  13 ISFIIAFAGAAFLAIFALAGEDDWravfqDDYLQHLI--------LFSFGQAFLSALLSIFFAIFLARALFRKPFLGKKA 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 115 LITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKI---IFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEE 191
Cdd:TIGR01253  85 LLKLCALTFILPALVAIFGIIGIYGRQGWLATLANLFGLEWqfhIYGLQGILIAHLFFNIPLAAQLFLQALENIPGEQRQ 164

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 192 AATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHIRGQTNTLPLHVEILYN-EYQFAAAFAVASI 270
Cdd:TIGR01253 165 LAAQLGLQGWHFFKFVEWPVFRQQCLPTAALIFMLCFASFATVLSLGGGPQATTIELAIYQAILFDfDLAKAALFALLQF 244


                  ....*....
gi 2318476672 271 LALLALVTL 279
Cdd:TIGR01253 245 VCCLGLFLL 253
PRK10592 PRK10592
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
 28-252 1.50e-05

putrescine transporter subunit: membrane component of ABC superfamily; Provisional


Pssm-ID: 182574  Cd Length: 281  Bit Score: 45.61  E-value: 1.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  28 APWvRYLLLTLGLSFFALFLVMPLVAVFSE----ALRKGWDV-YLAALVEADA-VSALKLTLIAAAIAVPLNLVFGVSAA 101
Cdd:PRK10592    9 SPW-RIVILVLGFTFLYAPMLMLVIYSFNSsklvTVWAGWSTrWYGELFRDDAmMSAVGLSLTIAACAATAAAILGTIAA 87

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 102 WAIAKH-DFRGKHLLITFIDLPFSVSPVVAGLVYVLLFGAQGWFGPWLQANDIKIIFaVPGIVLATIFVTFPFVARelip 180
Cdd:PRK10592   88 VVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIW-LAHVTFCTAYVAVVISSR---- 162

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2318476672 181 lMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGhiRGQTnTLPLHV 252
Cdd:PRK10592  163 -LRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSG--PGAT-TLPMLV 230
malG PRK10998
maltose ABC transporter permease MalG;
30-210 1.56e-04

maltose ABC transporter permease MalG;


Pssm-ID: 182891  Cd Length: 296  Bit Score: 42.39  E-value: 1.56e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  30 WVRYLLLtlgLSFFALFLvMPLVAVFSEALRKG-------------WDVYLAAL----VEADAV-------------SAL 79
Cdd:PRK10998   14 FATHLLL---LGFIALIM-FPLLMVIAISLREGnfatgslipeqisWEHWKLALgfsvEHADGRvtpppfpvllwlwNSV 89

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  80 KLTLIAAAIAVPLNlvfgVSAAWAIAKHDFRGKHLLITFIdLPFSVSPVVAGLV-YVLLFGAQGWFGPWLQANDI-KIIF 157
Cdd:PRK10998   90 KVAGITAIGIVALS----TTCAYAFARMRFKGKATLLKGM-LIFQMFPAVLSLVaLYALFDRLGQYIPFIGLNTHgGVIF 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2318476672 158 A-VPGIVLA--TIFVTFPFVARELiplmqaqgrdeEEAATVLGATGWQTFWRVTLP 210
Cdd:PRK10998  165 AyLGGIALHvwTIKGYFETIDSSL-----------EEAAALDGATPWQAFRLVLLP 209
pstC PRK11275
phosphate ABC transporter permease PstC;
161-239 5.99e-04

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 40.83  E-value: 5.99e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 161 GIVLATIFVtfPFVAR------ELIPLMQaqgrdeEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAV 234
Cdd:PRK11275  174 GVILAIMII--PYIAAvmrdvfEQTPVMM------KESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAV 245


                  ....*
gi 2318476672 235 SVVSG 239
Cdd:PRK11275  246 TFIIG 250
thiP TIGR01253
thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, ...
 37-274 2.87e-03

thiamine ABC transporter, permease protein; The model describes thiamine ABC transporter, permease protein in bacteria. The protein belongs to the larger ABC transport system. It consists of atleast three components: the inner mebrane permease; thiamine binding protein; an ATP-binding subunit. It has been experimentally demonstrated that the mutants in the various steps in the de novo synthesis of the thiamine and the biologically active form, namely thiamine pyrophosphate can be exogenously supplemented with thiamine, thiamine monophosphate (TMP) or thiamine pyrophosphate (TPP). [Transport and binding proteins, Other]


Pssm-ID: 130320 [Multi-domain]  Cd Length: 519  Bit Score: 39.13  E-value: 2.87e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  37 TLGLSFFALFLVMPLVAVFSEALRKgwDVYLAALVEADAVSALKLTLIAAAIAVPLNLVFGVSAAWAIAKHDFRGKHLLI 116
Cdd:TIGR01253 285 ILLILLALFFLFPPLLAIIIDALNS--RNLLEVLANPQLWQALGTSLRIALAAALLALTLAIALLLLSRELEALHKMKAG 362

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 117 TFIDLPFSVSPVVAGLVYvllfgAQGWFgPWLQANDIKIIFAVPGIVLATIFVTFPFVARELIPLMQAQGRDEEEAATVL 196
Cdd:TIGR01253 363 QFIEMAGMLILAIPGIVL-----AMGFF-LLLNDRDFLNIDADGIVIFCNALMAIPFALKILEAPFHDIMARYEMLCNSL 436

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2318476672 197 GATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSGHirgQTNTLPLHVEILYNEYQFAAAFAVASILALL 274
Cdd:TIGR01253 437 GIEGWQRFKLIELKALKAPLAQAFAFACALSIGDFGAIALFGND---DFRSLPFLLYQQIGNYRNQDAAVTAGILLLL 511
PhnU2 TIGR03262
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ...
 18-281 4.17e-03

putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 274495 [Multi-domain]  Cd Length: 546  Bit Score: 38.51  E-value: 4.17e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  18 RYQDNPATREAPW------VRYLLLTLGLSFFALFLVMPLVAVFSEALRKGWDVYLA--------ALVEADAVSALKLTL 83
Cdd:TIGR03262 259 RQRAQLSSRSVPYqpkpnrVRDAACLVYCAIISAALLAVVGMAVYASLVKFWPYNLSltlkhynfDLMDGGGWEAYKNSL 338

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  84 IAAAIAVPLNLVFGVSAAWAIAK-HDFRGKHLLITFID-LPFSVSPVVAGLVYVLLFGAqgwfgPWLQANDIKIIFAVpg 161
Cdd:TIGR03262 339 RLAATTALIGTILVFGGAYLIEKtRGFGLLRGVLRFLAiLPMAVPGLVLGLGYIFFFNA-----PTNPLNGLYGTMAL-- 411

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672 162 IVLATI--FVTFPFVAreLIPLMQAQGRDEEEAATVLGATGWQTFWRVTLPNVKWGLLYGVILCNARAMGEFGAVSVVSG 239
Cdd:TIGR03262 412 LVLCTVvhFYTVSHLT--AVTALKQIDSEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMTTVSAVVFLYS 489

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 2318476672 240 HirgqtNTLPLHVEILY--NEYQFAAAFAVASILALLALVTLIL 281
Cdd:TIGR03262 490 P-----DTKLASVAILNmdDAGDIAPAAAMATLIVLTSAVAKLL 528
YnjC COG4135
ABC-type uncharacterized transport system YnjBCD, permease component [General function ...
 25-210 7.77e-03

ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];


Pssm-ID: 443310 [Multi-domain]  Cd Length: 564  Bit Score: 37.54  E-value: 7.77e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  25 TREAPWVRYLLLTLGLSFFALFLVMPLVAV--------FSEALRKGWDVYLAALVEADAVSALKLTLIAAAIAVPLNLVF 96
Cdd:COG4135   296 LGDPALRRLGLALMLLIALLSLLGLALLLLwsfagrwrFPDALPSSWTLRFWQRAAPGLLEPLGNTLLLALASALIALVL 375

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2318476672  97 GVSAAWAIAKHDFRGKHLLITFIDLPFSVsPVVAglvyvLLFGAQGWFgpwLQANDIKIIFAVpgiVLATIFVTFPFVAR 176
Cdd:COG4135   376 VLACLEAEARRGRRPGRRALWLLYLPLLV-PQIA-----FLFGLQVLL---LRLGLDGTWLAV---IWAHLVFVLPYVFL 443

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2318476672 177 ELIPLMQAQGRDEEEAATVLGATGWQTFWRVTLP 210
Cdd:COG4135   444 SLAGPWRALDPRYAQVAASLGASPWRVFWRVKLP 477
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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