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Conserved domains on  [gi|2438385571|ref|WP_271748863|]
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SIS domain-containing protein [Collinsella aerofaciens]

Protein Classification

SIS domain-containing protein( domain architecture ID 11454870)

SIS (sugar isomerase) domain-containing protein such as Bacillus subtilis fructosamine deglycase FrlB, which catalyzes the conversion of a range of fructosamine 6-phosphates to glucose 6-phosphate and a free amino acid

CATH:  3.40.50.10490
EC:  3.5.-.-
Gene Ontology:  GO:0097367|GO:0005975|GO:0016787
PubMed:  10203754
SCOP:  4000802

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AgaS COG2222
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
18-331 2.22e-35

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


:

Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 131.94  E-value: 2.22e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  18 LERSSELVAQLVDIFQSGSFDALRIVASGSSRHAADCARDYLQDALQMQVSVVTP-EAFVDFEHTYPQHVLNIAVSQSGY 96
Cdd:COG2222    15 LAALAAAIAALLARLRAKPPRRVVLVGAGSSDHAAQAAAYLLERLLGIPVAALAPsELVVYPAYLKLEGTLVVAISRSGN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  97 STNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGVGVE-SV----DFVTLgvevLVEYLVLFGIYGGQArgtid 171
Cdd:COG2222    95 SPEVVAALELAKARGARTLAITNNPDSPLAEAADRVLPLPAGPEkSVaatkSFTTM----LLALLALLAAWGGDD----- 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 172 akGVAQRLDDLREAIHAnavMCKTAEAYVQDHMLELSEHtpAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHG 251
Cdd:COG2222   166 --ALLAALDALPAALEA---ALAADWPAAALAALADAER--VVFLGRGPLYGLAREAALKLKELSAGHAEAYSAAEFRHG 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 252 PEMQITPGYLVFIVDDPQGSERL-ANIADALSNVTTKTVLLTAHPKGRAHEVAVPQVAPLLSAIPNLVFFQTIAAMIAER 330
Cdd:COG2222   239 PKSLVDPGTLVVVLASEDPTRELdLDLAAELRALGARVVAIGAEDDAAITLPAIPDLHDALDPLLLLVVAQRLALALALA 318

                  .
gi 2438385571 331 L 331
Cdd:COG2222   319 R 319
 
Name Accession Description Interval E-value
AgaS COG2222
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
18-331 2.22e-35

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 131.94  E-value: 2.22e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  18 LERSSELVAQLVDIFQSGSFDALRIVASGSSRHAADCARDYLQDALQMQVSVVTP-EAFVDFEHTYPQHVLNIAVSQSGY 96
Cdd:COG2222    15 LAALAAAIAALLARLRAKPPRRVVLVGAGSSDHAAQAAAYLLERLLGIPVAALAPsELVVYPAYLKLEGTLVVAISRSGN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  97 STNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGVGVE-SV----DFVTLgvevLVEYLVLFGIYGGQArgtid 171
Cdd:COG2222    95 SPEVVAALELAKARGARTLAITNNPDSPLAEAADRVLPLPAGPEkSVaatkSFTTM----LLALLALLAAWGGDD----- 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 172 akGVAQRLDDLREAIHAnavMCKTAEAYVQDHMLELSEHtpAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHG 251
Cdd:COG2222   166 --ALLAALDALPAALEA---ALAADWPAAALAALADAER--VVFLGRGPLYGLAREAALKLKELSAGHAEAYSAAEFRHG 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 252 PEMQITPGYLVFIVDDPQGSERL-ANIADALSNVTTKTVLLTAHPKGRAHEVAVPQVAPLLSAIPNLVFFQTIAAMIAER 330
Cdd:COG2222   239 PKSLVDPGTLVVVLASEDPTRELdLDLAAELRALGARVVAIGAEDDAAITLPAIPDLHDALDPLLLLVVAQRLALALALA 318

                  .
gi 2438385571 331 L 331
Cdd:COG2222   319 R 319
SIS_GlmS_GlmD_1 cd05008
SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and ...
42-143 3.48e-17

SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.


Pssm-ID: 240141 [Multi-domain]  Cd Length: 126  Bit Score: 76.77  E-value: 3.48e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  42 IVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVDFEHTYPQHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVALTANV 121
Cdd:cd05008     4 IVGCGTSYHAALVAKYLLERLAGIPVEVEAASEFRYRRPLLDEDTLVIAISQSGETADTLAALRLAKEKGAKTVAITNVV 83
                          90       100
                  ....*....|....*....|...
gi 2438385571 122 EAPIKEHADIVLDYGVGVE-SVD 143
Cdd:cd05008    84 GSTLAREADYVLYLRAGPEiSVA 106
PTZ00295 PTZ00295
glucosamine-fructose-6-phosphate aminotransferase; Provisional
40-328 4.56e-10

glucosamine-fructose-6-phosphate aminotransferase; Provisional


Pssm-ID: 240349 [Multi-domain]  Cd Length: 640  Bit Score: 61.19  E-value: 4.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  40 LRIVASGSSRHAADCARDYLQdALQM--QVSVVTPEAFvdFEHTYP-QHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVA 116
Cdd:PTZ00295  325 LILVGCGTSYYAALFAASIMQ-KLKCfnTVQVIDASEL--TLYRLPdEDAGVIFISQSGETLDVVRALNLADELNLPKIS 401
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 117 LTANVEAPIKEHAD--IVLDYG--VGVESVDFVTlgVEVLVeyLVLFGIYGGQAR-GTIDAKGVAQRLDDLREAIHANAV 191
Cdd:PTZ00295  402 VVNTVGSLIARSTDcgVYLNAGreVAVASTKAFT--SQVTV--LSLIALWFAQNKeYSCSNYKCSSLINSLHRLPTYIGM 477
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 192 MCKTAEAYVQDHMLELSEHTPAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHGP-----EMQITPGYLVfIVD 266
Cdd:PTZ00295  478 TLKSCEEQCKRIAEKLKNAKSMFILGKGLGYPIALEGALKIKEITYIHAEGFSGGALKHGPfalidKEKNTPVILI-ILD 556
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2438385571 267 DpQGSERLANIADALSNVTTKTVLLTAHP---KGRAHE-VAVPQ---VAPLLSAIPnlvfFQTIAAMIA 328
Cdd:PTZ00295  557 D-EHKELMINAAEQVKARGAYIIVITDDEdlvKDFADEiILIPSngpLTALLAVIP----LQLLAYEIA 620
SIS pfam01380
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ...
42-134 2.11e-05

SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.


Pssm-ID: 426230 [Multi-domain]  Cd Length: 131  Bit Score: 43.83  E-value: 2.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  42 IVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVD--FEHTYPQHVLnIAVSQSGYSTNTIAALDYMRAHDMAAVALTA 119
Cdd:pfam01380  10 VIGRGTSYAIALELALKFEEIGYKVVEVELASELRHgvLALVDEDDLV-IAISYSGETKDLLAAAELAKARGAKIIAITD 88
                          90
                  ....*....|....*
gi 2438385571 120 NVEAPIKEHADIVLD 134
Cdd:pfam01380  89 SPGSPLAREADHVLY 103
 
Name Accession Description Interval E-value
AgaS COG2222
Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain ...
18-331 2.22e-35

Fructoselysine-6-P-deglycase FrlB or related protein, duplicated sugar isomerase (SIS) domain [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441824 [Multi-domain]  Cd Length: 336  Bit Score: 131.94  E-value: 2.22e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  18 LERSSELVAQLVDIFQSGSFDALRIVASGSSRHAADCARDYLQDALQMQVSVVTP-EAFVDFEHTYPQHVLNIAVSQSGY 96
Cdd:COG2222    15 LAALAAAIAALLARLRAKPPRRVVLVGAGSSDHAAQAAAYLLERLLGIPVAALAPsELVVYPAYLKLEGTLVVAISRSGN 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  97 STNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGVGVE-SV----DFVTLgvevLVEYLVLFGIYGGQArgtid 171
Cdd:COG2222    95 SPEVVAALELAKARGARTLAITNNPDSPLAEAADRVLPLPAGPEkSVaatkSFTTM----LLALLALLAAWGGDD----- 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 172 akGVAQRLDDLREAIHAnavMCKTAEAYVQDHMLELSEHtpAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHG 251
Cdd:COG2222   166 --ALLAALDALPAALEA---ALAADWPAAALAALADAER--VVFLGRGPLYGLAREAALKLKELSAGHAEAYSAAEFRHG 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 252 PEMQITPGYLVFIVDDPQGSERL-ANIADALSNVTTKTVLLTAHPKGRAHEVAVPQVAPLLSAIPNLVFFQTIAAMIAER 330
Cdd:COG2222   239 PKSLVDPGTLVVVLASEDPTRELdLDLAAELRALGARVVAIGAEDDAAITLPAIPDLHDALDPLLLLVVAQRLALALALA 318

                  .
gi 2438385571 331 L 331
Cdd:COG2222   319 R 319
SIS_GlmS_GlmD_1 cd05008
SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and ...
42-143 3.48e-17

SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.


Pssm-ID: 240141 [Multi-domain]  Cd Length: 126  Bit Score: 76.77  E-value: 3.48e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  42 IVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVDFEHTYPQHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVALTANV 121
Cdd:cd05008     4 IVGCGTSYHAALVAKYLLERLAGIPVEVEAASEFRYRRPLLDEDTLVIAISQSGETADTLAALRLAKEKGAKTVAITNVV 83
                          90       100
                  ....*....|....*....|...
gi 2438385571 122 EAPIKEHADIVLDYGVGVE-SVD 143
Cdd:cd05008    84 GSTLAREADYVLYLRAGPEiSVA 106
SIS_GlmS_GlmD_2 cd05009
SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and ...
206-331 4.92e-17

SIS (Sugar ISomerase) domain repeat 2 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) contains two SIS domains and catalyzes the deamination and isomerization of glucosamine-6-phosphate into fructose-6-phosphate with the release of ammonia; in presence of high ammonia concentration, GlmD can catalyze the reverse reaction.


Pssm-ID: 240142 [Multi-domain]  Cd Length: 153  Bit Score: 77.30  E-value: 4.92e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 206 ELSEHTPAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHGPEMQITPGYLVFIVDDPQGSERLA-NIADALSNV 284
Cdd:cd05009     9 KLKEAKSFYVLGRGPNYGTALEGALKLKETSYIHAEAYSAGEFKHGPIALVDEGTPVIFLAPEDRLEEKLeSLIKEVKAR 88
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2438385571 285 TTKTVLLTA---HPKGRAHEVAVPQVAPLLSAIPNLVFFQTIAAMIAERL 331
Cdd:cd05009    89 GAKVIVITDdgdAKDLADVVIRVPATVEELSPLLYIVPLQLLAYHLAVAR 138
GlmS COG0449
Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase ...
36-315 1.79e-11

Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440218 [Multi-domain]  Cd Length: 610  Bit Score: 65.42  E-value: 1.79e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  36 SFDALRIVASGSSRHAADCARDYLQDALQMQVSVVtpeafVDFEHTYPQHVLN-----IAVSQSGYSTNTIAALDYMRAH 110
Cdd:COG0449   293 NIDRIYIVACGTSYHAGLVGKYLIEELARIPVEVE-----IASEFRYRDPVVDpgtlvIAISQSGETADTLAALREAKEK 367
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 111 DMAAVALTANVEAPIKEHADIVLDYGVGVE-SV----DFVTlgvEVLVeyLVLFGIYGGQARGTIDAKGVAQRLDDLR-- 183
Cdd:COG0449   368 GAKVLAICNVVGSTIARESDAVLYTHAGPEiGVastkAFTT---QLAA--LYLLALYLARARGTLSAEEEAELLEELRkl 442
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 184 -----EAIHANAVMCKTAEayvqdhmlELSEHTPAMVVGNGPNYGVAEEAALKLSEtikIPAMHHEG---EEFVHGPEMQ 255
Cdd:COG0449   443 pekieEVLDLEEQIEELAE--------KYADARNALFLGRGINYPVALEGALKLKE---ISYIHAEGyaaGELKHGPIAL 511
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2438385571 256 ITPGYLVFIVdDPQGS--ERLaniadaLSNVT------TKTVLLTAHPKGRAHEVA-----VPQV----APLLSAIP 315
Cdd:COG0449   512 IDEGMPVVAI-APQDElyEKT------LSNIQevkargGKVIAIADEGDEEVEELAddvieVPEVdellAPILAVVP 581
PTZ00295 PTZ00295
glucosamine-fructose-6-phosphate aminotransferase; Provisional
40-328 4.56e-10

glucosamine-fructose-6-phosphate aminotransferase; Provisional


Pssm-ID: 240349 [Multi-domain]  Cd Length: 640  Bit Score: 61.19  E-value: 4.56e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  40 LRIVASGSSRHAADCARDYLQdALQM--QVSVVTPEAFvdFEHTYP-QHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVA 116
Cdd:PTZ00295  325 LILVGCGTSYYAALFAASIMQ-KLKCfnTVQVIDASEL--TLYRLPdEDAGVIFISQSGETLDVVRALNLADELNLPKIS 401
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 117 LTANVEAPIKEHAD--IVLDYG--VGVESVDFVTlgVEVLVeyLVLFGIYGGQAR-GTIDAKGVAQRLDDLREAIHANAV 191
Cdd:PTZ00295  402 VVNTVGSLIARSTDcgVYLNAGreVAVASTKAFT--SQVTV--LSLIALWFAQNKeYSCSNYKCSSLINSLHRLPTYIGM 477
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 192 MCKTAEAYVQDHMLELSEHTPAMVVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHGP-----EMQITPGYLVfIVD 266
Cdd:PTZ00295  478 TLKSCEEQCKRIAEKLKNAKSMFILGKGLGYPIALEGALKIKEITYIHAEGFSGGALKHGPfalidKEKNTPVILI-ILD 556
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2438385571 267 DpQGSERLANIADALSNVTTKTVLLTAHP---KGRAHE-VAVPQ---VAPLLSAIPnlvfFQTIAAMIA 328
Cdd:PTZ00295  557 D-EHKELMINAAEQVKARGAYIIVITDDEdlvKDFADEiILIPSngpLTALLAVIP----LQLLAYEIA 620
PRK00331 PRK00331
isomerizing glutamine--fructose-6-phosphate transaminase;
20-252 7.99e-10

isomerizing glutamine--fructose-6-phosphate transaminase;


Pssm-ID: 234729 [Multi-domain]  Cd Length: 604  Bit Score: 60.44  E-value: 7.99e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  20 RSSELVAQLVDIFQSGSFDALRIVASGSSRHAADCARdYLqdaLQMQVSVVTpEAFVDFEHTYPQHVLN-----IAVSQS 94
Cdd:PRK00331  272 RLDELGEGELADEDLKKIDRIYIVACGTSYHAGLVAK-YL---IESLAGIPV-EVEIASEFRYRDPVLSpktlvIAISQS 346
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  95 GYSTNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGVGVEsvdfvtLGV--------EVLVEYLvlFGIYGGQA 166
Cdd:PRK00331  347 GETADTLAALRLAKELGAKTLAICNVPGSTIARESDAVLYTHAGPE------IGVastkaftaQLAVLYL--LALALAKA 418
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 167 RGTIDAKGVAQRLDDLREAIHANAVMCKTAEAyvqdhMLELSEH----TPAMVVGNGPNYGVAEEAALKLSEtikIPAMH 242
Cdd:PRK00331  419 RGTLSAEEEADLVHELRELPALIEQVLDLKEQ-----IEELAEDfadaRNALFLGRGVDYPVALEGALKLKE---ISYIH 490
                         250
                  ....*....|...
gi 2438385571 243 HEG---EEFVHGP 252
Cdd:PRK00331  491 AEGyaaGELKHGP 503
PLN02981 PLN02981
glucosamine:fructose-6-phosphate aminotransferase
41-252 2.12e-09

glucosamine:fructose-6-phosphate aminotransferase


Pssm-ID: 215531 [Multi-domain]  Cd Length: 680  Bit Score: 58.99  E-value: 2.12e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  41 RIV--ASGSSRHAADCARDYLQDALQMQVSVVTPEAFVDFEHTYPQHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVALT 118
Cdd:PLN02981  365 RIVfiGCGTSYNAALAARPILEELSGVPVTMELASDLLDRQGPIYREDTAVFVSQSGETADTLRALEYAKENGALCVGIT 444
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 119 ANVEAPI--KEHADIVLDYG--VGVESVDFVTLGVEVLVEYLVLFG---IYGGQARGTIdAKGVAQRLDDLREAIHANAV 191
Cdd:PLN02981  445 NTVGSAIsrGTHCGVHINAGaeIGVASTKAYTSQIVAMTMLALALGedsISSRSRREAI-IDGLFDLPNKVREVLKLDQE 523
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2438385571 192 MCKTAEayvqdhmlELSEHTPAMVVGNGPNYGVAEEAALKLSEtikIPAMHHEG---EEFVHGP 252
Cdd:PLN02981  524 MKELAE--------LLIDEQSLLVFGRGYNYATALEGALKVKE---VALMHSEGilaGEMKHGP 576
PTZ00394 PTZ00394
glucosamine-fructose-6-phosphate aminotransferase; Provisional
40-330 2.51e-08

glucosamine-fructose-6-phosphate aminotransferase; Provisional


Pssm-ID: 173585 [Multi-domain]  Cd Length: 670  Bit Score: 55.65  E-value: 2.51e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  40 LRIVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVDFEHTYPQHVLNIAVSQSGYSTNTIAALDYMRAHDMAAVALTA 119
Cdd:PTZ00394  357 ILFIACGTSLNSCLAVRPLFEELVPLPISVENASDFLDRRPRIQRDDVCFFVSQSGETADTLMALQLCKEAGAMCVGITN 436
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 120 NVEAPIKEHAD--IVLDYGV--GVESVDFVTLGVEVLVeyLVLFGIYGGQARgtiDAKGVAQRLDDLREAIHANAVMCKT 195
Cdd:PTZ00394  437 VVGSSISRLTHyaIHLNAGVevGVASTKAYTSQVVVLT--LVALLLSSDSVR---LQERRNEIIRGLAELPAAISECLKI 511
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 196 AEAYVQDHMLELSEHTPAMVVGNGPNYGVAEEAALKLSEtikIPAMHHEG---EEFVHGPEMQI--TPGYLVFIVDDP-- 268
Cdd:PTZ00394  512 THDPVKALAARLKESSSILVLGRGYDLATAMEAALKVKE---LSYVHTEGihsGELKHGPLALIdeTSPVLAMCTHDKhf 588
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2438385571 269 -QGSERLANIADALSNVTTKTVLLTAHPKGRAHE-VAVPQVAPLLSAIPNLVFFQTIAAMIAER 330
Cdd:PTZ00394  589 gLSKSAVQQVKARGGAVVVFATEVDAELKAAASEiVLVPKTVDCLQCVVNVIPFQLLAYYMALL 652
RpiR COG1737
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains ...
42-133 3.33e-06

DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains [Transcription];


Pssm-ID: 441343 [Multi-domain]  Cd Length: 286  Bit Score: 48.00  E-value: 3.33e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  42 IVASGSSRHAADcardYLQDALQM---QVSVVTPEAFVDFEHTY---PQHVLnIAVSQSGYSTNTIAALDYMRAHDMAAV 115
Cdd:COG1737   139 IFGVGASAPVAE----DLAYKLLRlgkNVVLLDGDGHLQAESAAllgPGDVV-IAISFSGYTRETLEAARLAKERGAKVI 213
                          90
                  ....*....|....*...
gi 2438385571 116 ALTANVEAPIKEHADIVL 133
Cdd:COG1737   214 AITDSPLSPLAKLADVVL 231
SIS_RpiR cd05013
RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many ...
16-137 5.14e-06

RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.


Pssm-ID: 240144 [Multi-domain]  Cd Length: 139  Bit Score: 45.68  E-value: 5.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  16 ENLERSSELVAQLVDIFqsgsfdalrIVASGSSRHAADcardYLQDALQM---QVSVVT--PEAFVDFEHTYPQHVLnIA 90
Cdd:cd05013     1 EALEKAVDLLAKARRIY---------IFGVGSSGLVAE----YLAYKLLRlgkPVVLLSdpHLQLMSAANLTPGDVV-IA 66
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 2438385571  91 VSQSGYSTNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGV 137
Cdd:cd05013    67 ISFSGETKETVEAAEIAKERGAKVIAITDSANSPLAKLADIVLLVSS 113
SIS pfam01380
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ...
42-134 2.11e-05

SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.


Pssm-ID: 426230 [Multi-domain]  Cd Length: 131  Bit Score: 43.83  E-value: 2.11e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  42 IVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVD--FEHTYPQHVLnIAVSQSGYSTNTIAALDYMRAHDMAAVALTA 119
Cdd:pfam01380  10 VIGRGTSYAIALELALKFEEIGYKVVEVELASELRHgvLALVDEDDLV-IAISYSGETKDLLAAAELAKARGAKIIAITD 88
                          90
                  ....*....|....*
gi 2438385571 120 NVEAPIKEHADIVLD 134
Cdd:pfam01380  89 SPGSPLAREADHVLY 103
SIS pfam01380
SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and ...
215-295 2.28e-04

SIS domain; SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars. Presumably the SIS domains bind to the end-product of the pathway.


Pssm-ID: 426230 [Multi-domain]  Cd Length: 131  Bit Score: 40.75  E-value: 2.28e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 215 VVGNGPNYGVAEEAALKLSETIKIPAMHHEGEEFVHGPEMQITPGYLVFIVDDPQGSERLANIADALSNVTTKTVLLTAH 294
Cdd:pfam01380  10 VIGRGTSYAIALELALKFEEIGYKVVEVELASELRHGVLALVDEDDLVIAISYSGETKDLLAAAELAKARGAKIIAITDS 89

                  .
gi 2438385571 295 P 295
Cdd:pfam01380  90 P 90
SIS_1 cd05710
A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar ...
77-143 1.15e-03

A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.


Pssm-ID: 240214 [Multi-domain]  Cd Length: 120  Bit Score: 38.33  E-value: 1.15e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2438385571  77 DFEHTYPQHV----LNIAVSQSGYSTNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYGVGVESVD 143
Cdd:cd05710    36 EFLHTGPKRLteksVVILASHSGNTKETVAAAKFAKEKGATVIGLTDDEDSPLAKLADYVIVYGFEIDAVE 106
frlB PRK11382
fructoselysine 6-phosphate deglycase;
18-259 1.27e-03

fructoselysine 6-phosphate deglycase;


Pssm-ID: 183111 [Multi-domain]  Cd Length: 340  Bit Score: 40.37  E-value: 1.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  18 LERSSELVAQLVDIFQSGSFDALRIVASGSSRHAADCARDYLQDALQMQVSVVTPEAFVD-FEHTYPQHVLNIAVSQSGY 96
Cdd:PRK11382   25 LSHDVPLVHAIVEEMVKRDIDRIYFVACGSPLNAAQTAKHLADRFSDLQVYAISGWEFCDnTPYRLDDRCAVIGVSDYGK 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571  97 STNTIAALDYMRAHDMAAVALTANVEAPIKEHADIVLDYgvgveSVDFVtLGVEVLVEYLVLFGIYGGQARGTidakGVA 176
Cdd:PRK11382  105 TEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDY-----QADCI-WEIHLLLCYSVVLEMITRLAPNA----EIG 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2438385571 177 QRLDDLREAIHANAVMCKTAEAYVQdHMLELSEHTPAM-VVGNGPNYGVA-EEAALKLSETIKIPAMHHEGEEFVHGPEM 254
Cdd:PRK11382  175 KIKNDLKQLPNALGHLVRTWEEKGR-QLGELASQWPMIyTVAAGPLRPLGyKEGIVTLMEFTWTHGCVIESGEFRHGPLE 253

                  ....*
gi 2438385571 255 QITPG 259
Cdd:PRK11382  254 IVEPG 258
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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