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Conserved domains on  [gi|2486244211|ref|WP_278976451|]
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DUF2946 family protein [Oligella urethralis]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2944 super family cl12710
Protein of unknown function (DUF2946); This family of proteins with unknown function appear to ...
 2-115 1.15e-18

Protein of unknown function (DUF2946); This family of proteins with unknown function appear to be restricted to Proteobacteria.


The actual alignment was detected with superfamily member pfam11161:

Pssm-ID: 463233  Cd Length: 184  Bit Score: 77.40  E-value: 1.15e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2486244211   2 QNGPQRVYLSLPHAPFI--LFYDEAAARLSTHHGHTIKAVKHWYLSDEGRIFVQSDVGPAMLIGRDVPAWLEQIQVIAAD 79
Cdd:pfam11161  71 QNGPQRVYVELEAAPWVarLAPDGAGGQLTTHTGAAFAQVRAAWLDEDGRLYLATPAGLALVHDRDLAAFADALDLDWHD 150

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2486244211  80 GQrrpfaeADVAAILAGQQLTLSlTTAEGELSANCG 115
Cdd:pfam11161 151 PA------LPVSLPAGGAALPLE-PVAAAALPARFG 179
 
Name Accession Description Interval E-value
DUF2944 pfam11161
Protein of unknown function (DUF2946); This family of proteins with unknown function appear to ...
 2-115 1.15e-18

Protein of unknown function (DUF2946); This family of proteins with unknown function appear to be restricted to Proteobacteria.


Pssm-ID: 463233  Cd Length: 184  Bit Score: 77.40  E-value: 1.15e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2486244211   2 QNGPQRVYLSLPHAPFI--LFYDEAAARLSTHHGHTIKAVKHWYLSDEGRIFVQSDVGPAMLIGRDVPAWLEQIQVIAAD 79
Cdd:pfam11161  71 QNGPQRVYVELEAAPWVarLAPDGAGGQLTTHTGAAFAQVRAAWLDEDGRLYLATPAGLALVHDRDLAAFADALDLDWHD 150

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2486244211  80 GQrrpfaeADVAAILAGQQLTLSlTTAEGELSANCG 115
Cdd:pfam11161 151 PA------LPVSLPAGGAALPLE-PVAAAALPARFG 179
 
Name Accession Description Interval E-value
DUF2944 pfam11161
Protein of unknown function (DUF2946); This family of proteins with unknown function appear to ...
 2-115 1.15e-18

Protein of unknown function (DUF2946); This family of proteins with unknown function appear to be restricted to Proteobacteria.


Pssm-ID: 463233  Cd Length: 184  Bit Score: 77.40  E-value: 1.15e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2486244211   2 QNGPQRVYLSLPHAPFI--LFYDEAAARLSTHHGHTIKAVKHWYLSDEGRIFVQSDVGPAMLIGRDVPAWLEQIQVIAAD 79
Cdd:pfam11161  71 QNGPQRVYVELEAAPWVarLAPDGAGGQLTTHTGAAFAQVRAAWLDEDGRLYLATPAGLALVHDRDLAAFADALDLDWHD 150

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2486244211  80 GQrrpfaeADVAAILAGQQLTLSlTTAEGELSANCG 115
Cdd:pfam11161 151 PA------LPVSLPAGGAALPLE-PVAAAALPARFG 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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