|
Name |
Accession |
Description |
Interval |
E-value |
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
5-256 |
1.74e-50 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 166.05 E-value: 1.74e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 5 GKALVYVLVFLISALILSPLLFTVAGSFAVYWGADMYSAGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTMA 82
Cdd:COG1177 5 GRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEGFTLRWYAELFsdPRLLDALLNSLLIALLSTLLATVLGTPA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 83 GYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--MLVGHVIITFPLMFRTVLGTLRTKDfRTLDE 160
Cdd:COG1177 85 ALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLwgLILAHVVFTLPFVVLVVLARLQGFD-PSLEE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 161 CAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLYEAYSTLRIELGSAYTTLFLAM 240
Cdd:COG1177 164 AARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLILL 243
|
250
....*....|....*.
gi 2502538174 241 AIPLMYLLHRLNQSSA 256
Cdd:COG1177 244 SLLLLLLAERLRRRGE 259
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
64-253 |
4.23e-17 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 77.28 E-value: 4.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 64 TLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGALM------------- 130
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLelfgislvftftg 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 131 -LVGHVIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFN--MNFFLY 207
Cdd:TIGR02141 83 aVLASVIVSFPLMVQPIRAAFEAVD-PDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGatLMFAGN 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2502538174 208 TP-LTVTLPIGLYEAYSTlRIELGSAYTTLFLAMAIPLMYLLHRLNQ 253
Cdd:TIGR02141 162 IPgETQTIPLAIYDAVES-DYELAHQLSLVLLAISLIVLLLVELLNK 207
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
5-219 |
1.02e-10 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 60.38 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 5 GKALVYVLVFLISALILSPLLFTVAGSFavywGADMYS---AGVTLSWYAKVFEK------FGHTigftLVLAFGTVLVN 75
Cdd:PRK09500 2 GRLLRGGFMTLVYAYLYIPIIILIVNSF----NSSRFGinwKGFTTKWYELLFNNdsllqaAQHS----LTMAVFSATFA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 76 TVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--MLVGHVIITFPLMFRTVLGTLRTK 153
Cdd:PRK09500 74 TLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFwsLLFAHITFCLPFVVVTVYSRLKGF 153
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2502538174 154 DFRTLdECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLY 219
Cdd:PRK09500 154 DVRML-EAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIY 218
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
61-243 |
2.04e-09 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 55.75 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 61 IGFTLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL------MLVGH 134
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILpglglpALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 135 VIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTL 214
Cdd:cd06261 81 LLLIAPFARLIRRAALESIP-KDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180
....*....|....*....|....*....
gi 2502538174 215 PIGLYEAYSTLRIELGSAYTTLFLAMAIP 243
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLL 188
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
76-253 |
2.40e-03 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 38.05 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 76 TVLGTMAGYWFYRWKSRWVFVLEELL-SLPIAVpgIAIALALIQTYPAMRASGALMLVGHVIITFPLMFRTVLGTLRTKD 154
Cdd:pfam00528 2 IPLGIIAALRRGRRLDRLLRPLIDLLqALPSFV--LAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLP 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 155 fRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNM--NFFLYTPLTVTLPIGLYEAYSTLRIELGSA 232
Cdd:pfam00528 80 -SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLleFLGSWPGLGLLLIEAILGYDYPEIQGPVLA 158
|
170 180
....*....|....*....|.
gi 2502538174 233 YTTLFLAMAIPLMYLLHRLNQ 253
Cdd:pfam00528 159 AALILLLLNLLVDILQRLLDP 179
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
5-256 |
1.74e-50 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 166.05 E-value: 1.74e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 5 GKALVYVLVFLISALILSPLLFTVAGSFAVYWGADMYSAGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTMA 82
Cdd:COG1177 5 GRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTFPPEGFTLRWYAELFsdPRLLDALLNSLLIALLSTLLATVLGTPA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 83 GYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--MLVGHVIITFPLMFRTVLGTLRTKDfRTLDE 160
Cdd:COG1177 85 ALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLSGGLwgLILAHVVFTLPFVVLVVLARLQGFD-PSLEE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 161 CAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLYEAYSTLRIELGSAYTTLFLAM 240
Cdd:COG1177 164 AARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALSTLLILL 243
|
250
....*....|....*.
gi 2502538174 241 AIPLMYLLHRLNQSSA 256
Cdd:COG1177 244 SLLLLLLAERLRRRGE 259
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
4-251 |
2.53e-32 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 123.73 E-value: 2.53e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 4 AGKALVYVLVFLISALILSPLLFTVAGSFAVYwgadmYSAGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTM 81
Cdd:COG1178 286 WRWLALALCLLLVLLGLLLPLLALLLWSLTKA-----LDDNLTLDNYRFVLldPSLLRALLNSLLLALLAALLAVLLALL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 82 AGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTY-----PAMRASGALMLVGHVIITFPLMFRTVLGTLRTKDfR 156
Cdd:COG1178 361 LAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFnrplpLLLYGTLAILVLAYVVRFLPFALRSLEAALAQID-P 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 157 TLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLYEAYSTLRIELGSAYTTL 236
Cdd:COG1178 440 SLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPPGFETLAVLIYQLASSGRYGEAAALALL 519
|
250
....*....|....*
gi 2502538174 237 FLAMAIPLMYLLHRL 251
Cdd:COG1178 520 LVLVSLLPVLLLERL 534
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
61-256 |
9.07e-24 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 95.50 E-value: 9.07e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 61 IGFTLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGALM---------- 130
Cdd:COG4149 9 LWLSLKVALIATLLLLLLGIPLAWWLARTRFRGKGLLEALVTLPLVLPPTVLGFYLLLLFGRNGPLGQLLeelfgislvf 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 131 -----LVGHVIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFF 205
Cdd:COG4149 89 twtgaVLASVVVSLPLMVQPLRAAFEAVD-PRLEEAARTLGASPWRVFFRVTLPLAKPGILAGAVLAFARALGEFGATLM 167
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 2502538174 206 L--YTP-LTVTLPIGLYEAYSTLRIELGSAYTTLFLAMAIPLMYLLHRLNQSSA 256
Cdd:COG4149 168 FagNIPgKTQTLPLAIYDAVEAGDYAAAHALSLILLAISFVVLLLLNLLNRRRR 221
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
4-262 |
4.61e-21 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 91.76 E-value: 4.61e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 4 AGKALVYVLVFLISALILSPLLFTVAGSFavywgadmysaGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTM 81
Cdd:COG1178 8 RPRLLLLLLALLLALLVLLPLLALLLRAF-----------TDGLANFWALLsdPYLWRALGNTLLLALLVTLLSLLLGVP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 82 AGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYP-------AMRASGAL----------MLVGHVIITFPLMFR 144
Cdd:COG1178 77 LAWLLARTDFPGRRLLRWLLLLPLALPPYVVALAWIALFGpngllntLLRALFGLeppdiyglggIILVLVLFNYPYVYL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 145 TVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNmnfflyTPLTV-----TLPIGLY 219
Cdd:COG1178 157 LLRAALRSID-ASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFG------TPLVLgggytTLTTAIY 229
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 2502538174 220 EAY-STLRIELGSAYTTLFLAMAIPLMYLLHRLNQSSAFSRNGG 262
Cdd:COG1178 230 QAWlGDFDLGAAAALALVLLLLVLLLLLLERRLRRRRRYATVGG 273
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
4-251 |
7.33e-20 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 86.35 E-value: 7.33e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 4 AGKALVYVLVFLISALILSPLLFTVAGSFAVYWGADMYSAGVTLSWYAKVFEK--FGHTIGFTLVLAFGTVLVNTVLGTM 81
Cdd:COG1176 10 RPLLLLLPALLWLLLFFVLPLLLLLVYSFTTRDPYGGVVPGFTLENYARLFTDplYLKVLLRTLWIALLTTLICLLLGYP 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 82 AGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALA-------------------LIQTYPAMRASGALMLVGHVIITFPLM 142
Cdd:COG1176 90 IAYFLARAPPRWRNLLLLLVILPFWTSFLVRTYAwivllgrngllnslllalgLIDEPLRLLYTEFAVVIGLVYVYLPFM 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 143 FRTVLGTLRTKDFRTLdECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLYEAY 222
Cdd:COG1176 170 VLPLYAALEKIDPSLL-EAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQF 248
|
250 260 270
....*....|....*....|....*....|
gi 2502538174 223 STLR-IELGSAYTTLFLAMAIPLMYLLHRL 251
Cdd:COG1176 249 LSALnWPLAAALAVVLLLIVLLVLLLYLRL 278
|
|
| modB_ABC |
TIGR02141 |
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, ... |
64-253 |
4.23e-17 |
|
molybdate ABC transporter, permease protein; This model describes the permease protein, ModB, of the molybdate ABC transporter. This system has been characterized in E. coli, Staphylococcus carnosus, Rhodobacter capsulatus and Azotobacter vinlandii. Molybdate is chemically similar to sulfate, thiosulfate, and selenate. These related substrates, and sometimes molybdate itself, can be transported by the homologous sulfate receptor. Some apparent molybdenum transport operons include a permease related to this ModB, although less similar than some sulfate permease proteins and not included in this model. [Transport and binding proteins, Anions]
Pssm-ID: 273993 [Multi-domain] Cd Length: 208 Bit Score: 77.28 E-value: 4.23e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 64 TLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGALM------------- 130
Cdd:TIGR02141 3 SLKVAVIATLLLLPLGIPVAWLLARSRFRGKPLLEVLVTLPLVLPPTVLGFYLLIAFGPNGPIGKLLelfgislvftftg 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 131 -LVGHVIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFN--MNFFLY 207
Cdd:TIGR02141 83 aVLASVIVSFPLMVQPIRAAFEAVD-PDLEEAARTLGASESQTFLKVTLPLAFPGLLAGAVLSFARALGEFGatLMFAGN 161
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2502538174 208 TP-LTVTLPIGLYEAYSTlRIELGSAYTTLFLAMAIPLMYLLHRLNQ 253
Cdd:TIGR02141 162 IPgETQTIPLAIYDAVES-DYELAHQLSLVLLAISLIVLLLVELLNK 207
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
8-251 |
4.37e-16 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 75.56 E-value: 4.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 8 LVYVLVFLISALILSPLLFTVAGSFAVYWGADMYSAGVTLSWYAkvfekfghtIGFTLVLAFGTVLVNTVLGTMAGYWFY 87
Cdd:COG0555 12 TLGLTLLYLSLIVLLPLAALVLKAAGLGWAEFWAVLTSPRVLAA---------LKLSLGTALIAALINLVFGLPLAWVLV 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 88 RWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--------------MLVGHVIITFPLMFRTVLGTLRTK 153
Cdd:COG0555 83 RYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLlaplgikvaftplgIVLAQTFVSLPFVVRTVQPVLEEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 154 DfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFL--YTPL-TVTLPIGLYEAYSTLRIELG 230
Cdd:COG0555 163 D-PELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIagNLPMkTEILPLLIYLKLEEGDYAGA 241
|
250 260
....*....|....*....|.
gi 2502538174 231 SAYTTLFLAMAIPLMYLLHRL 251
Cdd:COG0555 242 TAIALVLLLISFLLLLLINLL 262
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
2-244 |
1.88e-14 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 71.28 E-value: 1.88e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 2 QTAGKALVYVLVFLISALILSPLLFTVAGSF-----AVYWGADMYSAGVTLSWYAKVFEK--FGHTIGFTLVLAFGTVLV 74
Cdd:COG0395 10 RRLGRILLYLLLILLALLFLFPLYWMVVTSFkppaeIFSGPPSLLPSEFTLENYRAAFTDgpFGRYLLNSLIVAVVSTVL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 75 NTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIA---------LALIQTYPAMrasgALMLVGHVIITFPLMFRT 145
Cdd:COG0395 90 SLLLSSLAAYALARFRFRGRKLLFLLILATLMIPGQVLLiplyllfrqLGLLNTYWGL----ILPYLAFGLPFGIFLLRQ 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 146 VLGTLRtkdfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNM-NFFLYTPLTVTLPIGLYEAYST 224
Cdd:COG0395 166 FFRSIP----RELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWpLILLTSPDLRTLPVGLASFQGQ 241
|
250 260
....*....|....*....|
gi 2502538174 225 LRIELGSAYTTLFLAMAIPL 244
Cdd:COG0395 242 YGTDWGLLMAAAVIATLPVL 261
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
5-219 |
1.02e-10 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 60.38 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 5 GKALVYVLVFLISALILSPLLFTVAGSFavywGADMYS---AGVTLSWYAKVFEK------FGHTigftLVLAFGTVLVN 75
Cdd:PRK09500 2 GRLLRGGFMTLVYAYLYIPIIILIVNSF----NSSRFGinwKGFTTKWYELLFNNdsllqaAQHS----LTMAVFSATFA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 76 TVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--MLVGHVIITFPLMFRTVLGTLRTK 153
Cdd:PRK09500 74 TLIGSLTAVALYRYRFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGFwsLLFAHITFCLPFVVVTVYSRLKGF 153
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2502538174 154 DFRTLdECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLY 219
Cdd:PRK09500 154 DVRML-EAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIY 218
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
13-251 |
4.59e-10 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 58.61 E-value: 4.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 13 VFLISALILSPLLFTVAGSFAVYWGADMYSAGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTMAGYWFYRwK 90
Cdd:COG1175 28 LLLLLVFVLYPLLYTLYLSFTDWNLLGPPPEFVGLDNYARLFtdPRFWNALGNTLLFTVVSVPLQLVLGLLLALLLNR-K 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 91 SRWVFVLEELLSLPIAVPGIAIALA--------------------------LIQTYPAMrasGALMLVGhVIITFPLMFR 144
Cdd:COG1175 107 LRGRGFFRTLFFLPWVISPVVVALIwkwlfnpdygllnallgalglepinwLGDPSLAL---PAVIIVT-VWKGTGFNML 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 145 TVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYT--PLTVTLPIGLY--- 219
Cdd:COG1175 183 IFLAGLQSIP-RELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQVFDLVYVLTGggPGNSTTTLVLYiyq 261
|
250 260 270
....*....|....*....|....*....|..
gi 2502538174 220 EAYSTLRIELGSAYTTLFLAMAIPLMYLLHRL 251
Cdd:COG1175 262 TAFQQFDFGYASAIAVVLFLIILVLTLLQLRL 293
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
62-200 |
1.00e-09 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 57.33 E-value: 1.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 62 GFTLVLAFGTVLVNTVLGTMAGYWF--YRWKSRWVfvLEELLSLPIAVPGIAIALALIQTYPAMRASGAL---------- 129
Cdd:CHL00187 58 SLTLSMALIAALINGFFGLLIAWVLvrYNFPGKRL--LDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLlshlgiqivf 135
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2502538174 130 ----MLVGHVIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEF 200
Cdd:CHL00187 136 tklgVLLAMIFVSFPFVVRTIQPVLQEIE-KELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAIGEY 209
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
61-243 |
2.04e-09 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 55.75 E-value: 2.04e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 61 IGFTLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL------MLVGH 134
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILpglglpALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 135 VIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTL 214
Cdd:cd06261 81 LLLIAPFARLIRRAALESIP-KDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGP 159
|
170 180
....*....|....*....|....*....
gi 2502538174 215 PIGLYEAYSTLRIELGSAYTTLFLAMAIP 243
Cdd:cd06261 160 GTGLLLIFAILFPGDLGVAAAVALILLLL 188
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
13-262 |
1.02e-07 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 51.93 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 13 VFLISALILSPLLFTVAGSFAVywgadmySAGVTLSWYAKVF--EKFGHTIGFTLVLAFGTVLVNTVLGTM-AGYWFYRW 89
Cdd:PRK15050 32 LLVLAPLVVYPLVRVVLQSLTG-------EHGLGLATYRAVLgsPDFRGALLTTLQIAFASTAGCLVLGVLlALVLAFVP 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 90 KSRWVFVlEELLSLPIAVPGIAIALALIQTY-PAMRASGALMLVGH--------------VI---ITF--PLMFRTVLGT 149
Cdd:PRK15050 105 FPGASLV-GRFIDTFVAFPSFLITLAFTFLYgSAGSVNIALQRLFGleappldflyspggVIlaeITFytPFVVRPLLAA 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 150 LRTKDFRTLdECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTVTLPIGLY-EAYSTLRIE 228
Cdd:PRK15050 184 FAQLDARQL-EAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIYsKAIVDFDYP 262
|
250 260 270
....*....|....*....|....*....|....
gi 2502538174 229 LGSAYTTLFLAMAIPLmYLLHRLnqssAFSRNGG 262
Cdd:PRK15050 263 TACAIAVVNLALSLGL-YALYRR----VNRRAGG 291
|
|
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
43-219 |
1.35e-07 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 51.39 E-value: 1.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 43 AGVTLSWYAKVFEKFG--HTIGFTLVLAFGTVLVNTVLGTMAG-----YWFYRWKSRWVFVLEELLSLPIAVPGIA---- 111
Cdd:PRK10592 45 AGWSTRWYGELFRDDAmmSAVGLSLTIAACAATAAAILGTIAAvvmvrFGRFRGSNGFAFMITAPLVMPDVITGLSllll 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 112 -IALALIQTYPAMRASGALMLVgHViiTFPLMFRTVLGTLRTKDF-RTLDECAATLGAGPMYRFFHVIFPSIRGAILSGA 189
Cdd:PRK10592 125 fVALAHAIGWPADRGMLTIWLA-HV--TFCTAYVAVVISSRLRELdRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGW 201
|
170 180 190
....*....|....*....|....*....|
gi 2502538174 190 VMVFMLSLGEFNMNFFLYTPLTVTLPIGLY 219
Cdd:PRK10592 202 LLAFTLSLDDLVIASFVSGPGATTLPMLVF 231
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
136-200 |
1.53e-07 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 50.69 E-value: 1.53e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2502538174 136 IITFPLMFRTVLGTLRTKDFRtLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEF 200
Cdd:PRK09421 101 VMAFPLMVRAIRLSLEAVDRK-LEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEF 164
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
7-200 |
1.18e-05 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 46.21 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 7 ALVYVLVFLISALILSPLLFTVAGSFAvywgaDMYSAGVTLSWYAKVFEK--FGHTIGFTLVLAFGTVLVNTVLGTMAGY 84
Cdd:TIGR03262 5 LLLAGMILALLLFLLLPLLALLTKSVY-----DSDGDFIGLANFAEYFATpgLLQSLGNSLTVSAIVTAIVVPLAFAFAY 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 85 WFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTY------PAMRASGAL-----MLVGHVIITFPLMFRTVLGTLRTK 153
Cdd:TIGR03262 80 ALTRSRIPGKGAFRLVALLPLLAPSLLPAISLIYLFgnqgllKGLLGGFSIygfwgIVIGEVFYTFPHALMILVTALSLA 159
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2502538174 154 DFRtLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEF 200
Cdd:TIGR03262 160 DGR-LYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDF 205
|
|
| YnjC |
COG4135 |
ABC-type uncharacterized transport system YnjBCD, permease component [General function ... |
7-198 |
2.65e-05 |
|
ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];
Pssm-ID: 443310 [Multi-domain] Cd Length: 564 Bit Score: 44.86 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 7 ALVYVLVFLISALILSPLLFTvagSFAVYWG-ADMYSAGVTLSWYAKVFEKFGHTIGFTLVLAFGTVLVNTVLGTMAGYW 85
Cdd:COG4135 306 LALMLLIALLSLLGLALLLLW---SFAGRWRfPDALPSSWTLRFWQRAAPGLLEPLGNTLLLALASALIALVLVLACLEA 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 86 FYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGALMLV--GHVIITFPLMFRTVLGTLRTKDFRtLDECAA 163
Cdd:COG4135 383 EARRGRRPGRRALWLLYLPLLVPQIAFLFGLQVLLLRLGLDGTWLAViwAHLVFVLPYVFLSLAGPWRALDPR-YAQVAA 461
|
170 180 190
....*....|....*....|....*....|....*
gi 2502538174 164 TLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLG 198
Cdd:COG4135 462 SLGASPWRVFWRVKLPLLLRPILTAAAVGFAVSVA 496
|
|
| cysW |
PRK11602 |
sulfate/thiosulfate ABC transporter permease CysW; |
5-200 |
5.07e-05 |
|
sulfate/thiosulfate ABC transporter permease CysW;
Pssm-ID: 183225 Cd Length: 283 Bit Score: 43.59 E-value: 5.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 5 GKALVYVLVFLISALILS-PLLFTVAGSFavywgadmySAGVTLSWYAKVFEKFGHTIGFTLVLAFGTVLVNTVLGTMAG 83
Cdd:PRK11602 18 GKWFLIGIGMLVSAFILVvPMIYIFVQAF---------SKGLMPVLQNLADPDMLHAIWLTVLIALIAVPVNLVFGILLA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 84 YWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGAL--------------MLVGHVIITFPLMFRTVLGT 149
Cdd:PRK11602 89 WLVTRFNFPGRQLLLTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWldehnlqlmfswpgMVLVTIFVTCPFVVRELVPV 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2502538174 150 LRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEF 200
Cdd:PRK11602 169 MLSQG-SQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF 218
|
|
| PRK10683 |
PRK10683 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
132-200 |
5.38e-04 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182646 Cd Length: 317 Bit Score: 40.46 E-value: 5.38e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2502538174 132 VGHVIITFPLMFRTVLGTLRTKDFrTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEF 200
Cdd:PRK10683 189 IGIVYAYLPFMVLPIYTALTRIDY-SLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEF 256
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
64-206 |
8.00e-04 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 40.12 E-value: 8.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 64 TLVLAFGTVLVNTVLGTMAGYWFYRWKSRWVFVLEELLSLPIAVPGIAIALALIQTYPAMRASGALM------------- 130
Cdd:PRK10971 63 TLLSAFVASIFNAVFGLLMAWILTRYRFPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLakfdikvtytwlg 142
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2502538174 131 -LVGHVIITFPLMFRTVLGTLRTKDfRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFL 206
Cdd:PRK10971 143 iAVAMAFTSIPFVVRTVQPVLEELG-PEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFI 218
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
7-212 |
1.34e-03 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 39.66 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 7 ALVYVLVFLISALILSPLLFTVAGSFAVYWGADMysaGVTLSWYA-KVFEKFGHTIGF-TLVLAFGTVLVNTVLGTMAGY 84
Cdd:TIGR03262 281 AACLVYCAIISAALLAVVGMAVYASLVKFWPYNL---SLTLKHYNfDLMDGGGWEAYKnSLRLAATTALIGTILVFGGAY 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 85 WFYRWKSRWVF--VLEELLSLPIAVPGIAIALALIQTYPA-------MRASGALMLVGHVIITFPLMFRTVLGTLRTKDf 155
Cdd:TIGR03262 358 LIEKTRGFGLLrgVLRFLAILPMAVPGLVLGLGYIFFFNAptnplngLYGTMALLVLCTVVHFYTVSHLTAVTALKQID- 436
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2502538174 156 RTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNMNFFLYTPLTV 212
Cdd:TIGR03262 437 SEFEAVSASLKVPFYKTFLRVTLPVCLPAILDIARYLFVNSMTTVSAVVFLYSPDTK 493
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
76-253 |
2.40e-03 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 38.05 E-value: 2.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 76 TVLGTMAGYWFYRWKSRWVFVLEELL-SLPIAVpgIAIALALIQTYPAMRASGALMLVGHVIITFPLMFRTVLGTLRTKD 154
Cdd:pfam00528 2 IPLGIIAALRRGRRLDRLLRPLIDLLqALPSFV--LAILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLP 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2502538174 155 fRTLDECAATLGAGPMYRFFHVIFPSIRGAILSGAVMVFMLSLGEFNM--NFFLYTPLTVTLPIGLYEAYSTLRIELGSA 232
Cdd:pfam00528 80 -SDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLleFLGSWPGLGLLLIEAILGYDYPEIQGPVLA 158
|
170 180
....*....|....*....|.
gi 2502538174 233 YTTLFLAMAIPLMYLLHRLNQ 253
Cdd:pfam00528 159 AALILLLLNLLVDILQRLLDP 179
|
|
| |
