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Conserved domains on  [gi|2520613651|ref|WP_285532356|]
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MULTISPECIES: DUF4410 domain-containing protein [Asaia]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4410 super family cl40168
Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. ...
 53-148 1.07e-11

Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 187 and 238 amino acids in length.


The actual alignment was detected with superfamily member pfam14366:

Pssm-ID: 433907  Cd Length: 118  Bit Score: 60.10  E-value: 1.07e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2520613651  53 IDDESVPPRKADRARrhdAAVATTRVALMNDLQKM-LSARHLAVvASGQPADMTLTCTLTKIRPGSTVARLLIGYGAGKA 131
Cdd:pfam14366  13 IKNDDEAAKQQADAK---ELVDALADSLVKELKSKgLFAARSAA-GTAPKNDLIVEGRFTKYDEGNRAARVLIGFGAGAT 88

                          90
                  ....*....|....*..
gi 2520613651 132 ELQVRTVLAEAGSRHTL 148
Cdd:pfam14366  89 ELEVEVRLIDASSGKEL 105
 
Name Accession Description Interval E-value
DUF4410 pfam14366
Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. ...
 53-148 1.07e-11

Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 187 and 238 amino acids in length.


Pssm-ID: 433907  Cd Length: 118  Bit Score: 60.10  E-value: 1.07e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2520613651  53 IDDESVPPRKADRARrhdAAVATTRVALMNDLQKM-LSARHLAVvASGQPADMTLTCTLTKIRPGSTVARLLIGYGAGKA 131
Cdd:pfam14366  13 IKNDDEAAKQQADAK---ELVDALADSLVKELKSKgLFAARSAA-GTAPKNDLIVEGRFTKYDEGNRAARVLIGFGAGAT 88

                          90
                  ....*....|....*..
gi 2520613651 132 ELQVRTVLAEAGSRHTL 148
Cdd:pfam14366  89 ELEVEVRLIDASSGKEL 105
 
Name Accession Description Interval E-value
DUF4410 pfam14366
Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. ...
 53-148 1.07e-11

Domain of unknown function (DUF4410); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 187 and 238 amino acids in length.


Pssm-ID: 433907  Cd Length: 118  Bit Score: 60.10  E-value: 1.07e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2520613651  53 IDDESVPPRKADRARrhdAAVATTRVALMNDLQKM-LSARHLAVvASGQPADMTLTCTLTKIRPGSTVARLLIGYGAGKA 131
Cdd:pfam14366  13 IKNDDEAAKQQADAK---ELVDALADSLVKELKSKgLFAARSAA-GTAPKNDLIVEGRFTKYDEGNRAARVLIGFGAGAT 88

                          90
                  ....*....|....*..
gi 2520613651 132 ELQVRTVLAEAGSRHTL 148
Cdd:pfam14366  89 ELEVEVRLIDASSGKEL 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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