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TonB-dependent receptor [Microbulbifer sp.]
Protein Classification
TonB-dependent receptor ( domain architecture ID 1003665 )
TonB-dependent receptor may act as a channel to allow import of extracellular nutrients, such as iron-siderophore complexes or non-Fe compounds
List of domain hits
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul super family
cl36973 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
1-889
0e+00
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
TIGR01782 :Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 563.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 METIV VTG t FAG SL DRS I HV KR EGE S IS D AVV A A DIGKLP A VNVAEALQRVPGV T I V R EA GEG QFI SVRGLGP NFQSV TL 80
Cdd:TIGR01782 1 LDAVQ VTG - QRA SL EKA I DA KR DAD S VV D VIS A E DIGKLP D VNVAEALQRVPGV S I E R DQ GEG RYV SVRGLGP SYNRT TL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 81 NG M playne N I RTSGQS GR Q F RFRV LP AD L ID GV V V S K A PTADM T EGGIG SS V EI R MLN P L D R D - PF LS T S FE G T Y EER A 159
Cdd:TIGR01782 80 NG R ------ T I ASTDSG GR A F SLDL LP SE L VS GV E V Y K T PTADM D EGGIG GT V DL R TRS P F D Y D g RT LS G S AQ G G Y NDL A 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 160 DAMS P KSAVS A -- SW QNSE G T FGVL GGV SYQ E R EVQ ferl GNGWGVIGEEDVND A EY - LH G VAV P GDIQVTLEQEK R D R M 236
Cdd:TIGR01782 154 GKDK P GPRGA A sy SW TFGD G Q FGVL LSA SYQ K R DFA ---- EDNVETENWGTYTS A DG g AQ G LYF P RGVRYRSYRND R E R K 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 237 SAV G G LQWRP T D NF E FD LD MQ YS QF nn EIA E R R LTYQTWGYWDN -- LDQ S TAVIDD G R LV A GT LNGAR I RNTTEFSDQAH 314
Cdd:TIGR01782 230 GVN G S LQWRP S D AL E LY LD TL YS KY -- DDD E T R QQIEFRTLNGG st VIT S NQTATS G A LV Q GT VANLQ I LVEARYNEEKE 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 315 ENAIVIA G A E YNVAD W IFEPRVSF S R AT S D LETPLQ R IEYRTEE G V gnt T FD LGTDAVSNGKIN A LYT D - LDL T D PA TVP 393
Cdd:TIGR01782 308 TTTSLTL G G E WTGDR W TLDGDLGY S K AT R D RPDRVT R FFTAPTP G Y --- D FD YRGGPTLTLGTP A DGD D a SNY T N PA NGE 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 394 F RR YR I RPMNS ED EDVTFKF DAT R D lh ME F AN L nltqm K L GV QVSD R SRDYQRRDRSTTALRNGLELSDGFNGVMVP G NT 473
Cdd:TIGR01782 385 L RR TQ I SYQKA ED SEDAAQL DAT F D -- GP F TS L ----- K F GV RYRR R DKTNRGSRYRRSIIGATGASGLAGVPSDLA G AG 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 474 F D QVI G Q - GQL W TS AD - W A VWR dafvidge FDGVEPSASQLEPT A ADLR N S Y G V D E EIL AAYA RVD F AS qin DIPFT G IA 551
Cdd:TIGR01782 458 L D GGL G G p LTG W DP AD l D A FLN -------- AARGDAAGGGTYTY A STAP N T Y T V T E DTT AAYA MAN F DT --- GLRLR G NV 526
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 552 GVRY VE TD SLV DG TLATAEVD G E G N V ITVS SA rtt NNT Y KEW LPSLN VNF DLTDD VIM R LSG SKT M TRP SLSE L R dvvvp 631
Cdd:TIGR01782 527 GVRY ER TD QTS DG WQSQPAAN G T G S V LVPV SA --- DRD Y TDV LPSLN LAY DLTDD LVL R FAA SKT I TRP DFGD L A ----- 598
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 632 NSGTV SD ifvlgsaam NDPSLIL T AA GGNP Y L E PY T S W NLD M S F EWYF DDF G AF S I A G FYKD VDDY I ASDFE T R T LPF av 711
Cdd:TIGR01782 599 ANTSL SD --------- DGTGGTV T VS GGNP D L K PY E S D NLD L S L EWYF GPG G LL S A A V FYKD IKNF I VTTTS T E T NDG -- 667
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 712 h D G STLPVD VLVS S P A N V G DVA - I S G L ELG FTGRLEM ------ G L G IS A TA T FAT S KLELDKSD V GVQTAGIQ G I S DQSY 784
Cdd:TIGR01782 668 - G G GLVVAG VLVS R P V N G G KAG k I R G V ELG YQQTFDF lpgpls G F G VQ A NY T YVD S EADPSVDG V QRRKLPLP G L S KNTA 746
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 785 SISPF YE S G P F EIN LSY TW R D DYL T D G G VTVTS R pteeda TSY Y QKGI G T LD MG ASY RFAENYEAFM QA V N ILENRPST Y 864
Cdd:TIGR01782 747 NATLY YE K G G F SAR LSY NY R S DYL L D V G GSNIN R ------ LDR Y VDPR G Q LD LS ASY QVSDHLSLGL QA S N LTNEPSRW Y 820
890 900
....*....|....*....|....*
gi 2526794198 865 M G SED R LHQVHNY GRT VNF G V R A KF 889
Cdd:TIGR01782 821 T G GKQ R PREYVET GRT YML G L R Y KF 845
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul
TIGR01782 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
1-889
0e+00
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 563.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 METIV VTG t FAG SL DRS I HV KR EGE S IS D AVV A A DIGKLP A VNVAEALQRVPGV T I V R EA GEG QFI SVRGLGP NFQSV TL 80
Cdd:TIGR01782 1 LDAVQ VTG - QRA SL EKA I DA KR DAD S VV D VIS A E DIGKLP D VNVAEALQRVPGV S I E R DQ GEG RYV SVRGLGP SYNRT TL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 81 NG M playne N I RTSGQS GR Q F RFRV LP AD L ID GV V V S K A PTADM T EGGIG SS V EI R MLN P L D R D - PF LS T S FE G T Y EER A 159
Cdd:TIGR01782 80 NG R ------ T I ASTDSG GR A F SLDL LP SE L VS GV E V Y K T PTADM D EGGIG GT V DL R TRS P F D Y D g RT LS G S AQ G G Y NDL A 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 160 DAMS P KSAVS A -- SW QNSE G T FGVL GGV SYQ E R EVQ ferl GNGWGVIGEEDVND A EY - LH G VAV P GDIQVTLEQEK R D R M 236
Cdd:TIGR01782 154 GKDK P GPRGA A sy SW TFGD G Q FGVL LSA SYQ K R DFA ---- EDNVETENWGTYTS A DG g AQ G LYF P RGVRYRSYRND R E R K 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 237 SAV G G LQWRP T D NF E FD LD MQ YS QF nn EIA E R R LTYQTWGYWDN -- LDQ S TAVIDD G R LV A GT LNGAR I RNTTEFSDQAH 314
Cdd:TIGR01782 230 GVN G S LQWRP S D AL E LY LD TL YS KY -- DDD E T R QQIEFRTLNGG st VIT S NQTATS G A LV Q GT VANLQ I LVEARYNEEKE 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 315 ENAIVIA G A E YNVAD W IFEPRVSF S R AT S D LETPLQ R IEYRTEE G V gnt T FD LGTDAVSNGKIN A LYT D - LDL T D PA TVP 393
Cdd:TIGR01782 308 TTTSLTL G G E WTGDR W TLDGDLGY S K AT R D RPDRVT R FFTAPTP G Y --- D FD YRGGPTLTLGTP A DGD D a SNY T N PA NGE 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 394 F RR YR I RPMNS ED EDVTFKF DAT R D lh ME F AN L nltqm K L GV QVSD R SRDYQRRDRSTTALRNGLELSDGFNGVMVP G NT 473
Cdd:TIGR01782 385 L RR TQ I SYQKA ED SEDAAQL DAT F D -- GP F TS L ----- K F GV RYRR R DKTNRGSRYRRSIIGATGASGLAGVPSDLA G AG 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 474 F D QVI G Q - GQL W TS AD - W A VWR dafvidge FDGVEPSASQLEPT A ADLR N S Y G V D E EIL AAYA RVD F AS qin DIPFT G IA 551
Cdd:TIGR01782 458 L D GGL G G p LTG W DP AD l D A FLN -------- AARGDAAGGGTYTY A STAP N T Y T V T E DTT AAYA MAN F DT --- GLRLR G NV 526
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 552 GVRY VE TD SLV DG TLATAEVD G E G N V ITVS SA rtt NNT Y KEW LPSLN VNF DLTDD VIM R LSG SKT M TRP SLSE L R dvvvp 631
Cdd:TIGR01782 527 GVRY ER TD QTS DG WQSQPAAN G T G S V LVPV SA --- DRD Y TDV LPSLN LAY DLTDD LVL R FAA SKT I TRP DFGD L A ----- 598
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 632 NSGTV SD ifvlgsaam NDPSLIL T AA GGNP Y L E PY T S W NLD M S F EWYF DDF G AF S I A G FYKD VDDY I ASDFE T R T LPF av 711
Cdd:TIGR01782 599 ANTSL SD --------- DGTGGTV T VS GGNP D L K PY E S D NLD L S L EWYF GPG G LL S A A V FYKD IKNF I VTTTS T E T NDG -- 667
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 712 h D G STLPVD VLVS S P A N V G DVA - I S G L ELG FTGRLEM ------ G L G IS A TA T FAT S KLELDKSD V GVQTAGIQ G I S DQSY 784
Cdd:TIGR01782 668 - G G GLVVAG VLVS R P V N G G KAG k I R G V ELG YQQTFDF lpgpls G F G VQ A NY T YVD S EADPSVDG V QRRKLPLP G L S KNTA 746
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 785 SISPF YE S G P F EIN LSY TW R D DYL T D G G VTVTS R pteeda TSY Y QKGI G T LD MG ASY RFAENYEAFM QA V N ILENRPST Y 864
Cdd:TIGR01782 747 NATLY YE K G G F SAR LSY NY R S DYL L D V G GSNIN R ------ LDR Y VDPR G Q LD LS ASY QVSDHLSLGL QA S N LTNEPSRW Y 820
890 900
....*....|....*....|....*
gi 2526794198 865 M G SED R LHQVHNY GRT VNF G V R A KF 889
Cdd:TIGR01782 821 T G GKQ R PREYVET GRT YML G L R Y KF 845
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
29-889
2.10e-58
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 211.54
E-value: 2.10e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 29 DAVV A A DI G K L PA VNV A EA L Q R V PGV TIV R E - A G E G QF IS V RG L GP NFQS V TLN G M PLA ynenirt S GQS GR QFRFRVL P 107
Cdd:cd01347 3 SVIT A E DI E K Q PA TSL A DL L R R I PGV SVT R G g G G G G ST IS I RG F GP DRTL V LVD G L PLA ------- S SNY GR GVDLNTI P 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 108 AD LI DG V V V S K A P TADMT - E G G IG SS V E I RMLN P L D rdp FLST S FEGT Y EERA damspksavsa S WQNSE G T F G V L G GVS 186
Cdd:cd01347 76 PE LI ER V E V L K G P SSALY g S G A IG GV V N I ITKR P T D --- EFGG S VTAG Y GSDN ----------- S GSSGG G G F D V S G ALA 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 187 YQER evqferl GNGWGVIGEE D v N D AEYLHGV avpgdiqv TLEQEKRD R MSAV G G L Q WRP T D NFEFD LD MQ Y SQFNNEIA 266
Cdd:cd01347 142 DDGA ------- FGARLYGAYR D - G D GTIDGDG -------- QADDSDEE R YNVA G K L D WRP D D DTRLT LD AG Y QDQDADGP 205
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 267 errltyqtwg YWDNLDQS T AVIDD G RLVAG T LNGARIRNTTE fsdqah ENAIVIA G A E YNVA D WIFEP R VSF S ratsdle 346
Cdd:cd01347 206 ---------- GGTLPANG T GSSLG G GPSSN T NGDRDWDYRDR ------ YRKRASL G L E HDLN D TGWTL R ANL S ------- 262
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 347 tplqrie Y RTEEGV G NTTFDL G TDAVSN G kinalytdldltdpatvpfr RYRIRPMN SE DEDVTFK FDA TRDLHMEFANL 426
Cdd:cd01347 263 ------- Y SYTDND G DPLILN G GNNAAG G -------------------- DLGRSGYS SE RDTTQLG FDA GLNAPFGTGPV 315
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 427 NL T q MK LGV qvsdrsr D Y Q R RD rsttalrnglelsdgfngvmvpgntfdqvigqgqlwtsadwavwrdafvidgefdgve 506
Cdd:cd01347 316 AH T - LT LGV ------- E Y R R EE ---------------------------------------------------------- 329
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 507 psasqleptaadlrnsyg V DE EIL A A YA rvdf ASQ I N - DIPF T GIA G V RY VET D SLVDG T L A TAE vdgegnvitvssar T 585
Cdd:cd01347 330 ------------------ L DE KQT A L YA ---- QDT I E l TDDL T LTL G L RY DHY D QDSKD T I A GGT -------------- T 373
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 586 TNNT Y KE W L PSL NVNFD LTD DVIMRL S G S KTMTR PSL S EL R dvvvpnsgtvsdifvlgsaam NDP S LIL TAA G GNP Y L E P 665
Cdd:cd01347 374 AKKS Y SH W S PSL GLVYK LTD GLSLYA S Y S QGFRA PSL G EL Y --------------------- GGG S HGG TAA V GNP N L K P 432
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 666 YT S WNLDMSFEWYFD D FGAF S I A G F YK D VDDY I A S D fetrtlpfavhdg S T LPVDV LV SSPA N V G DVA I S G L EL GFTGR L 745
Cdd:cd01347 433 EK S KQYELGLKYDPG D GLTL S A A L F RI D IKNE I V S T ------------- P T NTGLG LV TVYV N G G KAR I R G V EL EASYD L 499
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 746 EM GLG ISATA T FATSKLELDKSDVGVQTAG iq GI SDQSYSISPF YE SGP -- FEINLSYTW R DDYLT D ggvtvtsrp T EED 823
Cdd:cd01347 500 TD GLG LTGSY T YTDTEVKRTDGATTGNRLP -- GI PKHTANLGLD YE LPD eg LTAGGGVRY R GKQYA D --------- T ANG 568
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2526794198 824 ATSYYQK G IGTL D MG ASY R F AE N YEAFMQAV N ILENRPS T YMGSEDRLHQVHN - Y GRT VNFG V RA KF 889
Cdd:cd01347 569 NNTVKVP G YTLV D LS ASY Q F TK N LTLRLGVN N LFDKDYY T SLSVRGSGLYGYY g P GRT YYLS V SY KF 635
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
362-888
5.56e-31
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 127.58
E-value: 5.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 362 N T TFD LG T D AVSNGKINA L YTD LD LTDPATVPFRRYRIRPMNSEDEDVTFKFDATR D LHMEFANLN L TQMK LG VQV S DRS 441
Cdd:pfam00593 12 D T LLT LG Y D YSRYTDGLD L GLT LD GYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGY D YDLGDGLSW L STLR LG LRY S SLD 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 442 R DY QRRDRSTTALRNG L ELSDGFNGVMVP G NTFDQVIGQGQ L WTSADWAVWRDAFVIDGEFD gveps ASQLE P TAADLRN 521
Cdd:pfam00593 92 G DY TSNSSGLSGAGDY L SDDRLYGLYGLD G DLELSLDLSHD L LLGVELRTAGLDYRRLDDDA ----- YDPYD P ANPSSSS 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 522 SYGVDEEILAA Y ARVDF as QIN D i PF T GIA G V RY VETDSLV D GTLATA evdgegnvitvssa RTTNNT Y KEWL P S L NVNF 601
Cdd:pfam00593 167 YSDTTTDSYGL Y LQDNI -- KLT D - RL T LTL G L RY DHYSTDG D DGNGGG -------------- DNFSRS Y SAFS P R L GLVY 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 602 DL TD DVIMRL S G S KTMTR PSL S EL RDVVVPNS G T vsdifvlgsaamndpslil TA AGGNP Y L E P Y TS W N LDMSFEW y F D D 681
Cdd:pfam00593 230 KP TD NLSLYA S Y S RGFRA PSL G EL YGSGSGGG G G ------------------- AV AGGNP D L K P E TS D N YELGLKY - D D G 289
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 682 FGAF S I A G FY K D VDDY I A SD FETRT L pfavhdgstlpv DVL V SSPA NVG DVA I S G L EL GFT GRL EMGLGISATA T FATSK 761
Cdd:pfam00593 290 RLSL S L A L FY I D IKNL I T SD PDGPG L ------------ GGT V YTYT NVG KAR I R G V EL ELS GRL WGLGLSGGGY T YTDAD 357
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 762 LEL D KS D V G VQ tag IQGISDQSYSISPF Y E -- S G PFEIN L SYTW rddyltdgg V TVTS R PTEED A TSYYQK G IGTL D MG A 839
Cdd:pfam00593 358 DDA D AD D T G NP --- LPNVPRHTANLGLT Y D fp L G GWGAR L GARY --------- V GSGE R RYGDA A NTFKTP G YTLV D LS A 425
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 2526794198 840 S YR FAE N YEAFMQAV N ILENRPST Y MG S EDRLHQVHN - Y GRT VNF G VRA K 888
Cdd:pfam00593 426 G YR LNK N LTLRLGVN N LFDKYYKR Y YS S GGGNLGGYP g P GRT FYL G LSY K 475
CirA
COG1629 Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
1-857
1.85e-28
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain]
Cd Length: 644
Bit Score: 121.86
E-value: 1.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 M E TI VVT G T fagsldrsihvk R EG ES IS D AVVA ------ ADIGKL PA VNVAEA L Q RVPGV TIVREA G EGQF IS V RG L G PN 74
Cdd:COG1629 1 L E EV VVT A T ------------ R TD ES LQ D VPGS vsvisr EQLEDQ PA TDLGDL L R RVPGV SVTSAG G GAGQ IS I RG F G GG 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 75 FQS V -- TLN G M PL aynenirt SGQ SG RQFRFRVLPADL I DG V V V SKA P TADMT - E G GI G SSVE I RMLN P L D RD pfl STSF 151
Cdd:COG1629 69 GNR V lv LVD G V PL -------- NDP SG GDGGLSYIDPED I ER V E V LRG P SSALY g S G AL G GVIN I VTKK P K D GK --- GGEV 137
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 152 EGT Y EERAD amspk SAV S A S WQNSE G TFGVLGGV SY QER evqferlg N G W gvigeedvndaeylhgvavpgdiqvt LEQE 231
Cdd:COG1629 138 SAS Y GSYGT ----- YRA S L S LSGGN G KLAYRLSA SY RDS -------- D G Y -------------------------- RDNS 178
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 232 KR DR MSAVGG L QWRPT D NFEFD L dmqysqfnneiaerrltyq TWG Y W D NLDQ S TAVIDDGR L VAGT l NGARIR N TTEFSD 311
Cdd:COG1629 179 DS DR YNLRAK L GYQLG D DTRLT L ------------------- SAS Y S D SDQD S PGYLTLAA L RPRG - AMDDGT N PYSNDT 238
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 312 QAHENAIVIAGA EY NVADWIFEPRV S FS ratsdletplqrie YR T eegvgnttfdlgtdavsngki NALYT D L D L T dpa T 391
Cdd:COG1629 239 DDNTRDRYSLSL EY EHLGDGLKLSA S AY -------------- YR Y --------------------- DDTDL D S D F T --- P 280
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 392 V P FRRYRIRPMNSEDEDVTFKFDA T R DL HME f ANLN L T qmk L G V qvsdrsr DYQR R D RS ttalrnglelsdgfngvmvp G 471
Cdd:COG1629 281 T P ADGGTLEQTDFDNRTYGLELRL T Y DL GFG - GKHT L L --- V G L ------- DYQR Q D LD -------------------- G 329
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 472 NTFDQVI G Q G Q L W T SAD wavwrdafvidgefdgvepsasqleptaadl RNSYGVDEEI LA A YA RVDF as QIN D i PF T GI A 551
Cdd:COG1629 330 SGYPLDL G S G S L P T LTS ------------------------------- GADDDGTTTS LA L YA QDTY -- KLT D - KL T LT A 375
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 552 G V RY vetdslv D GTLATAEVDGE G N vitvs SARTTNNT Y KEWL PSL NVNFD L TDDVIMRL S G S KTMTR P SLS EL R dvvvp 631
Cdd:COG1629 376 G L RY ------- D YVSYDVDDTVT G T ----- DSASGSRS Y SAFS PSL GLTYQ L SPNLSLYA S Y S RGFRA P TFG EL Y ----- 438
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 632 nsgtvsdifvlgsaamnd PSLILTAAG GNP Y L E P Y TS W N LDMSFEWYFD D FGA - F S I A G FY K DVD DY I A S DFETRTLP F A 710
Cdd:COG1629 439 ------------------ ANGTDPYSV GNP D L K P E TS T N YELGLRYRLL D GRL s L S L A L FY S DVD NE I L S VPLPNDSG F S 500
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 711 VH dgstlpvdvlvss PA N V G DVAIS G L EL GFTGR L EM GL GIS A TATFATS K L e L D KS D VGVQTA G -- IQ G ISDQSYS isp 788
Cdd:COG1629 501 TY ------------- YT N A G KARSY G V EL ELSYQ L TP GL SLN A SYSYTDA K F - D D DT D GSADLD G nr LP G VPPLTAN --- 563
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 789 fyesgpfe IN L S Y TWRDDYLTDG GV T - V TS R PTEEDA T SYYQK G IGTL D M GA S YRF AE N YEAFMQAV N IL 857
Cdd:COG1629 564 -------- LG L T Y EFPGGWSLGL GV R y V GD R YLDDAN T QGAPG G YTLV D L GA G YRF GD N LTLSLGVD N LF 625
PRK10064
PRK10064 catecholate siderophore receptor CirA; Provisional
2-124
1.46e-03
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain]
Cd Length: 663
Bit Score: 42.18
E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 2 ET I VVT GTFAGS ldrsi HV K REGE SIS d AVVAA D IGKL P AV N VAEA L QR VPGV TIVR E AGEGQFI S V RGL GPNFQSVTLN 81
Cdd:PRK10064 31 ET M VVT ASAVEQ ----- NL K DAPA SIS - VITQE D LQRK P VQ N LKDV L KE VPGV QLTN E GDNRKGV S I RGL DSSYTLILID 104
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2526794198 82 G MPL ayne N I R TSGQSGRQ F RFRVL P A D L I DGVV V SKA P TADM 124
Cdd:PRK10064 105 G KRV ---- N S R NAVFRHND F DLNWI P V D A I ERIE V VRG P MSSL 143
Name
Accession
Description
Interval
E-value
TonB-Xanth-Caul
TIGR01782 TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane ...
1-889
0e+00
TonB-dependent receptor; This model represents a family of TonB-dependent outer-membrane receptors which are found mainly in Xanthomonas and Caulobacter. These appear to represent the expansion of a paralogous family in that the 22 X. axonopodis (21 in X. campestris) and 18 C. crescentus sequences are more closely related to each other than any of the many TonB-dependent receptors found in other species. In fact, the Crescentus and Xanthomonas sequences are inseparable on a phylogenetic tree using a PAM-weighted neighbor-joining method, indicating that one of the two genuses may have acquired this set of receptors from the other. The mechanism by which this family is shared between Xanthomonas, a gamma proteobacterial plant pathogen and Caulobacter, an alpha proteobacterial aquatic organism is unclear. [Transport and binding proteins, Porins]
Pssm-ID: 273804 [Multi-domain]
Cd Length: 845
Bit Score: 563.88
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 METIV VTG t FAG SL DRS I HV KR EGE S IS D AVV A A DIGKLP A VNVAEALQRVPGV T I V R EA GEG QFI SVRGLGP NFQSV TL 80
Cdd:TIGR01782 1 LDAVQ VTG - QRA SL EKA I DA KR DAD S VV D VIS A E DIGKLP D VNVAEALQRVPGV S I E R DQ GEG RYV SVRGLGP SYNRT TL 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 81 NG M playne N I RTSGQS GR Q F RFRV LP AD L ID GV V V S K A PTADM T EGGIG SS V EI R MLN P L D R D - PF LS T S FE G T Y EER A 159
Cdd:TIGR01782 80 NG R ------ T I ASTDSG GR A F SLDL LP SE L VS GV E V Y K T PTADM D EGGIG GT V DL R TRS P F D Y D g RT LS G S AQ G G Y NDL A 153
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 160 DAMS P KSAVS A -- SW QNSE G T FGVL GGV SYQ E R EVQ ferl GNGWGVIGEEDVND A EY - LH G VAV P GDIQVTLEQEK R D R M 236
Cdd:TIGR01782 154 GKDK P GPRGA A sy SW TFGD G Q FGVL LSA SYQ K R DFA ---- EDNVETENWGTYTS A DG g AQ G LYF P RGVRYRSYRND R E R K 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 237 SAV G G LQWRP T D NF E FD LD MQ YS QF nn EIA E R R LTYQTWGYWDN -- LDQ S TAVIDD G R LV A GT LNGAR I RNTTEFSDQAH 314
Cdd:TIGR01782 230 GVN G S LQWRP S D AL E LY LD TL YS KY -- DDD E T R QQIEFRTLNGG st VIT S NQTATS G A LV Q GT VANLQ I LVEARYNEEKE 307
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 315 ENAIVIA G A E YNVAD W IFEPRVSF S R AT S D LETPLQ R IEYRTEE G V gnt T FD LGTDAVSNGKIN A LYT D - LDL T D PA TVP 393
Cdd:TIGR01782 308 TTTSLTL G G E WTGDR W TLDGDLGY S K AT R D RPDRVT R FFTAPTP G Y --- D FD YRGGPTLTLGTP A DGD D a SNY T N PA NGE 384
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 394 F RR YR I RPMNS ED EDVTFKF DAT R D lh ME F AN L nltqm K L GV QVSD R SRDYQRRDRSTTALRNGLELSDGFNGVMVP G NT 473
Cdd:TIGR01782 385 L RR TQ I SYQKA ED SEDAAQL DAT F D -- GP F TS L ----- K F GV RYRR R DKTNRGSRYRRSIIGATGASGLAGVPSDLA G AG 457
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 474 F D QVI G Q - GQL W TS AD - W A VWR dafvidge FDGVEPSASQLEPT A ADLR N S Y G V D E EIL AAYA RVD F AS qin DIPFT G IA 551
Cdd:TIGR01782 458 L D GGL G G p LTG W DP AD l D A FLN -------- AARGDAAGGGTYTY A STAP N T Y T V T E DTT AAYA MAN F DT --- GLRLR G NV 526
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 552 GVRY VE TD SLV DG TLATAEVD G E G N V ITVS SA rtt NNT Y KEW LPSLN VNF DLTDD VIM R LSG SKT M TRP SLSE L R dvvvp 631
Cdd:TIGR01782 527 GVRY ER TD QTS DG WQSQPAAN G T G S V LVPV SA --- DRD Y TDV LPSLN LAY DLTDD LVL R FAA SKT I TRP DFGD L A ----- 598
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 632 NSGTV SD ifvlgsaam NDPSLIL T AA GGNP Y L E PY T S W NLD M S F EWYF DDF G AF S I A G FYKD VDDY I ASDFE T R T LPF av 711
Cdd:TIGR01782 599 ANTSL SD --------- DGTGGTV T VS GGNP D L K PY E S D NLD L S L EWYF GPG G LL S A A V FYKD IKNF I VTTTS T E T NDG -- 667
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 712 h D G STLPVD VLVS S P A N V G DVA - I S G L ELG FTGRLEM ------ G L G IS A TA T FAT S KLELDKSD V GVQTAGIQ G I S DQSY 784
Cdd:TIGR01782 668 - G G GLVVAG VLVS R P V N G G KAG k I R G V ELG YQQTFDF lpgpls G F G VQ A NY T YVD S EADPSVDG V QRRKLPLP G L S KNTA 746
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 785 SISPF YE S G P F EIN LSY TW R D DYL T D G G VTVTS R pteeda TSY Y QKGI G T LD MG ASY RFAENYEAFM QA V N ILENRPST Y 864
Cdd:TIGR01782 747 NATLY YE K G G F SAR LSY NY R S DYL L D V G GSNIN R ------ LDR Y VDPR G Q LD LS ASY QVSDHLSLGL QA S N LTNEPSRW Y 820
890 900
....*....|....*....|....*
gi 2526794198 865 M G SED R LHQVHNY GRT VNF G V R A KF 889
Cdd:TIGR01782 821 T G GKQ R PREYVET GRT YML G L R Y KF 845
ligand_gated_channel
cd01347 TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) ...
29-889
2.10e-58
TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.
Pssm-ID: 238657 [Multi-domain]
Cd Length: 635
Bit Score: 211.54
E-value: 2.10e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 29 DAVV A A DI G K L PA VNV A EA L Q R V PGV TIV R E - A G E G QF IS V RG L GP NFQS V TLN G M PLA ynenirt S GQS GR QFRFRVL P 107
Cdd:cd01347 3 SVIT A E DI E K Q PA TSL A DL L R R I PGV SVT R G g G G G G ST IS I RG F GP DRTL V LVD G L PLA ------- S SNY GR GVDLNTI P 75
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 108 AD LI DG V V V S K A P TADMT - E G G IG SS V E I RMLN P L D rdp FLST S FEGT Y EERA damspksavsa S WQNSE G T F G V L G GVS 186
Cdd:cd01347 76 PE LI ER V E V L K G P SSALY g S G A IG GV V N I ITKR P T D --- EFGG S VTAG Y GSDN ----------- S GSSGG G G F D V S G ALA 141
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 187 YQER evqferl GNGWGVIGEE D v N D AEYLHGV avpgdiqv TLEQEKRD R MSAV G G L Q WRP T D NFEFD LD MQ Y SQFNNEIA 266
Cdd:cd01347 142 DDGA ------- FGARLYGAYR D - G D GTIDGDG -------- QADDSDEE R YNVA G K L D WRP D D DTRLT LD AG Y QDQDADGP 205
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 267 errltyqtwg YWDNLDQS T AVIDD G RLVAG T LNGARIRNTTE fsdqah ENAIVIA G A E YNVA D WIFEP R VSF S ratsdle 346
Cdd:cd01347 206 ---------- GGTLPANG T GSSLG G GPSSN T NGDRDWDYRDR ------ YRKRASL G L E HDLN D TGWTL R ANL S ------- 262
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 347 tplqrie Y RTEEGV G NTTFDL G TDAVSN G kinalytdldltdpatvpfr RYRIRPMN SE DEDVTFK FDA TRDLHMEFANL 426
Cdd:cd01347 263 ------- Y SYTDND G DPLILN G GNNAAG G -------------------- DLGRSGYS SE RDTTQLG FDA GLNAPFGTGPV 315
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 427 NL T q MK LGV qvsdrsr D Y Q R RD rsttalrnglelsdgfngvmvpgntfdqvigqgqlwtsadwavwrdafvidgefdgve 506
Cdd:cd01347 316 AH T - LT LGV ------- E Y R R EE ---------------------------------------------------------- 329
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 507 psasqleptaadlrnsyg V DE EIL A A YA rvdf ASQ I N - DIPF T GIA G V RY VET D SLVDG T L A TAE vdgegnvitvssar T 585
Cdd:cd01347 330 ------------------ L DE KQT A L YA ---- QDT I E l TDDL T LTL G L RY DHY D QDSKD T I A GGT -------------- T 373
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 586 TNNT Y KE W L PSL NVNFD LTD DVIMRL S G S KTMTR PSL S EL R dvvvpnsgtvsdifvlgsaam NDP S LIL TAA G GNP Y L E P 665
Cdd:cd01347 374 AKKS Y SH W S PSL GLVYK LTD GLSLYA S Y S QGFRA PSL G EL Y --------------------- GGG S HGG TAA V GNP N L K P 432
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 666 YT S WNLDMSFEWYFD D FGAF S I A G F YK D VDDY I A S D fetrtlpfavhdg S T LPVDV LV SSPA N V G DVA I S G L EL GFTGR L 745
Cdd:cd01347 433 EK S KQYELGLKYDPG D GLTL S A A L F RI D IKNE I V S T ------------- P T NTGLG LV TVYV N G G KAR I R G V EL EASYD L 499
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 746 EM GLG ISATA T FATSKLELDKSDVGVQTAG iq GI SDQSYSISPF YE SGP -- FEINLSYTW R DDYLT D ggvtvtsrp T EED 823
Cdd:cd01347 500 TD GLG LTGSY T YTDTEVKRTDGATTGNRLP -- GI PKHTANLGLD YE LPD eg LTAGGGVRY R GKQYA D --------- T ANG 568
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2526794198 824 ATSYYQK G IGTL D MG ASY R F AE N YEAFMQAV N ILENRPS T YMGSEDRLHQVHN - Y GRT VNFG V RA KF 889
Cdd:cd01347 569 NNTVKVP G YTLV D LS ASY Q F TK N LTLRLGVN N LFDKDYY T SLSVRGSGLYGYY g P GRT YYLS V SY KF 635
TonB_dep_Rec
pfam00593 TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
362-888
5.56e-31
TonB dependent receptor; This model now only covers the conserved part of the barrel structure.
Pssm-ID: 395474 [Multi-domain]
Cd Length: 475
Bit Score: 127.58
E-value: 5.56e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 362 N T TFD LG T D AVSNGKINA L YTD LD LTDPATVPFRRYRIRPMNSEDEDVTFKFDATR D LHMEFANLN L TQMK LG VQV S DRS 441
Cdd:pfam00593 12 D T LLT LG Y D YSRYTDGLD L GLT LD GYGNDGGYLGDRPLYYGRDYSDTDRKRLSLGY D YDLGDGLSW L STLR LG LRY S SLD 91
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 442 R DY QRRDRSTTALRNG L ELSDGFNGVMVP G NTFDQVIGQGQ L WTSADWAVWRDAFVIDGEFD gveps ASQLE P TAADLRN 521
Cdd:pfam00593 92 G DY TSNSSGLSGAGDY L SDDRLYGLYGLD G DLELSLDLSHD L LLGVELRTAGLDYRRLDDDA ----- YDPYD P ANPSSSS 166
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 522 SYGVDEEILAA Y ARVDF as QIN D i PF T GIA G V RY VETDSLV D GTLATA evdgegnvitvssa RTTNNT Y KEWL P S L NVNF 601
Cdd:pfam00593 167 YSDTTTDSYGL Y LQDNI -- KLT D - RL T LTL G L RY DHYSTDG D DGNGGG -------------- DNFSRS Y SAFS P R L GLVY 229
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 602 DL TD DVIMRL S G S KTMTR PSL S EL RDVVVPNS G T vsdifvlgsaamndpslil TA AGGNP Y L E P Y TS W N LDMSFEW y F D D 681
Cdd:pfam00593 230 KP TD NLSLYA S Y S RGFRA PSL G EL YGSGSGGG G G ------------------- AV AGGNP D L K P E TS D N YELGLKY - D D G 289
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 682 FGAF S I A G FY K D VDDY I A SD FETRT L pfavhdgstlpv DVL V SSPA NVG DVA I S G L EL GFT GRL EMGLGISATA T FATSK 761
Cdd:pfam00593 290 RLSL S L A L FY I D IKNL I T SD PDGPG L ------------ GGT V YTYT NVG KAR I R G V EL ELS GRL WGLGLSGGGY T YTDAD 357
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 762 LEL D KS D V G VQ tag IQGISDQSYSISPF Y E -- S G PFEIN L SYTW rddyltdgg V TVTS R PTEED A TSYYQK G IGTL D MG A 839
Cdd:pfam00593 358 DDA D AD D T G NP --- LPNVPRHTANLGLT Y D fp L G GWGAR L GARY --------- V GSGE R RYGDA A NTFKTP G YTLV D LS A 425
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 2526794198 840 S YR FAE N YEAFMQAV N ILENRPST Y MG S EDRLHQVHN - Y GRT VNF G VRA K 888
Cdd:pfam00593 426 G YR LNK N LTLRLGVN N LFDKYYKR Y YS S GGGNLGGYP g P GRT FYL G LSY K 475
CirA
COG1629 Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
1-857
1.85e-28
Outer membrane receptor protein, Fe transport [Inorganic ion transport and metabolism];
Pssm-ID: 441236 [Multi-domain]
Cd Length: 644
Bit Score: 121.86
E-value: 1.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 M E TI VVT G T fagsldrsihvk R EG ES IS D AVVA ------ ADIGKL PA VNVAEA L Q RVPGV TIVREA G EGQF IS V RG L G PN 74
Cdd:COG1629 1 L E EV VVT A T ------------ R TD ES LQ D VPGS vsvisr EQLEDQ PA TDLGDL L R RVPGV SVTSAG G GAGQ IS I RG F G GG 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 75 FQS V -- TLN G M PL aynenirt SGQ SG RQFRFRVLPADL I DG V V V SKA P TADMT - E G GI G SSVE I RMLN P L D RD pfl STSF 151
Cdd:COG1629 69 GNR V lv LVD G V PL -------- NDP SG GDGGLSYIDPED I ER V E V LRG P SSALY g S G AL G GVIN I VTKK P K D GK --- GGEV 137
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 152 EGT Y EERAD amspk SAV S A S WQNSE G TFGVLGGV SY QER evqferlg N G W gvigeedvndaeylhgvavpgdiqvt LEQE 231
Cdd:COG1629 138 SAS Y GSYGT ----- YRA S L S LSGGN G KLAYRLSA SY RDS -------- D G Y -------------------------- RDNS 178
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 232 KR DR MSAVGG L QWRPT D NFEFD L dmqysqfnneiaerrltyq TWG Y W D NLDQ S TAVIDDGR L VAGT l NGARIR N TTEFSD 311
Cdd:COG1629 179 DS DR YNLRAK L GYQLG D DTRLT L ------------------- SAS Y S D SDQD S PGYLTLAA L RPRG - AMDDGT N PYSNDT 238
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 312 QAHENAIVIAGA EY NVADWIFEPRV S FS ratsdletplqrie YR T eegvgnttfdlgtdavsngki NALYT D L D L T dpa T 391
Cdd:COG1629 239 DDNTRDRYSLSL EY EHLGDGLKLSA S AY -------------- YR Y --------------------- DDTDL D S D F T --- P 280
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 392 V P FRRYRIRPMNSEDEDVTFKFDA T R DL HME f ANLN L T qmk L G V qvsdrsr DYQR R D RS ttalrnglelsdgfngvmvp G 471
Cdd:COG1629 281 T P ADGGTLEQTDFDNRTYGLELRL T Y DL GFG - GKHT L L --- V G L ------- DYQR Q D LD -------------------- G 329
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 472 NTFDQVI G Q G Q L W T SAD wavwrdafvidgefdgvepsasqleptaadl RNSYGVDEEI LA A YA RVDF as QIN D i PF T GI A 551
Cdd:COG1629 330 SGYPLDL G S G S L P T LTS ------------------------------- GADDDGTTTS LA L YA QDTY -- KLT D - KL T LT A 375
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 552 G V RY vetdslv D GTLATAEVDGE G N vitvs SARTTNNT Y KEWL PSL NVNFD L TDDVIMRL S G S KTMTR P SLS EL R dvvvp 631
Cdd:COG1629 376 G L RY ------- D YVSYDVDDTVT G T ----- DSASGSRS Y SAFS PSL GLTYQ L SPNLSLYA S Y S RGFRA P TFG EL Y ----- 438
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 632 nsgtvsdifvlgsaamnd PSLILTAAG GNP Y L E P Y TS W N LDMSFEWYFD D FGA - F S I A G FY K DVD DY I A S DFETRTLP F A 710
Cdd:COG1629 439 ------------------ ANGTDPYSV GNP D L K P E TS T N YELGLRYRLL D GRL s L S L A L FY S DVD NE I L S VPLPNDSG F S 500
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 711 VH dgstlpvdvlvss PA N V G DVAIS G L EL GFTGR L EM GL GIS A TATFATS K L e L D KS D VGVQTA G -- IQ G ISDQSYS isp 788
Cdd:COG1629 501 TY ------------- YT N A G KARSY G V EL ELSYQ L TP GL SLN A SYSYTDA K F - D D DT D GSADLD G nr LP G VPPLTAN --- 563
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 789 fyesgpfe IN L S Y TWRDDYLTDG GV T - V TS R PTEEDA T SYYQK G IGTL D M GA S YRF AE N YEAFMQAV N IL 857
Cdd:COG1629 564 -------- LG L T Y EFPGGWSLGL GV R y V GD R YLDDAN T QGAPG G YTLV D L GA G YRF GD N LTLSLGVD N LF 625
FepA
COG4771 Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and ...
1-850
2.07e-25
Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism];
Pssm-ID: 443803 [Multi-domain]
Cd Length: 612
Bit Score: 112.26
E-value: 2.07e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 1 M E TI VVT G T fagsld R SIHVKREGESISDAVV A AD I G KL P A VNV A E AL QRV PGV TIV R EA G E G -- QF IS V RGLG PNFQS V 78
Cdd:COG4771 27 L E EV VVT A T ------ R TEQSLSDAPASVSVIT A EE I E KL G A TDL A D AL RLL PGV SVT R SG G R G gs SG IS I RGLG GDRVL V 100
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 79 TLN G M P L aynenir TSGQS G RQFRFRVL P A D L I DGVV V SKA P - T A DMTEGG IG SSVE I RMLN P L D RDPF - L S TSFEGTYE 156
Cdd:COG4771 101 LID G V P V ------- NNPAL G GGGDLSYI P P D D I ERIE V IRG P a S A LYGSDA IG GVIN I ITKK P T D ELEG s V S LGYGSNGN 173
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 157 ERADA mspksav S A S WQNSEGTFGV L GGV SY QE R EVQFERLGN G wgvigeedvndaeylhgvavpgdiqv TLEQEKRD R M 236
Cdd:COG4771 174 GTYSG ------- S L S LGGPGDKLSF L LSG SY RD R DGYLDYRNG G -------------------------- FVGNSGYE R Y 220
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 237 SAVGG L QW R PT DN FEFD L DMQ YS QFNNEIAERR L T y Q T WGYW DN LDQSTAVI D D G rlvagtlngarirnttefsdqahen 316
Cdd:COG4771 221 NLNAK L GY R LS DN HRLS L SGG YS RQDRDGGPPT L G - D T EISS DN AGDRDTTT D R G ------------------------- 274
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 317 aiviagaeynvadwifeprvsfsratsdletplqrieyrteegvg N TTFDLGT D AVS N GKINAL Y TDL D l T D PATVPFRR 396
Cdd:COG4771 275 --------------------------------------------- N YSLRYNG D LGD N LDLSLY Y SRT D - R D STNGSLGG 308
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 397 YRIRPMN S E D EDVTFKF D A T RD L hme FA N LN LT qmk LG V qvsdrsr D Y QRR D RSTTALRN G lelsdgfngvmvpgntfdq 476
Cdd:COG4771 309 STGSFSD S D D TTYGLEL D L T YP L --- GG N HT LT --- LG A ------- E Y RYD D LDSSSFLG G ------------------- 356
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 477 vigqgqlwtsadwavwrdafvidgefdgvepsasqleptaadlrns YGVDEEILAAY A RVDF as QIN D i PF T GI AG V RY v 556
Cdd:COG4771 357 ---------------------------------------------- ADASRDTYGLF A QDEW -- KLT D - KL T LT AG L RY - 386
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 557 ETD S lvdgtlataevdgegnvitvssa RTTNNT Y KEWL P S L NVNF DL T D DVIM R L S GSKTMTR PSL S EL RDVVVPNS G TV 636
Cdd:COG4771 387 DYY S ----------------------- TFGASN Y TAFS P R L GLRY DL S D NLTL R A S YGRGFRA PSL A EL YGSGTGTP G RY 443
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 637 sdifvlgsaamndpslilta AG GNP Y L E P Y TS W N LDMSF E WYFDDF G A - F S IA GFY K D VD D Y I ASDFETRTLPF avhdgs 715
Cdd:COG4771 444 -------------------- VL GNP D L K P E TS D N YELGL E YRLGNG G L s L S LT GFY T D IK D L I VLVPVGPGPGD ------ 497
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 716 tlpvdvl V SSPA NVG DVAIS GLEL GFTG RL EM GL GIS A TA T FAT SK LE ldksdvgvqtagi Q G ISDQSYSIS P FYE sgp F 795
Cdd:COG4771 498 ------- V LQYE NVG KARTY GLEL ELKY RL GK GL TLT A SY T YLD SK ID ------------- D G DTGEPLPNV P PHK --- A 554
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*...
gi 2526794198 796 EIN L S Y TWRDDY L TDGGVTVTS --- RPTEEDATSY Y QK G IGT LD MG ASY RFAE N YEAF 850
Cdd:COG4771 555 NLG L D Y RLPKWW L LLLLTRYYG gry VTPPSGRLEG Y TP G YTL LD LR ASY KLTK N LTLS 612
FecA
COG4772 Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
530-889
5.87e-21
Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism];
Pssm-ID: 443804 [Multi-domain]
Cd Length: 681
Bit Score: 98.46
E-value: 5.87e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 530 LAAYA RVD F as QIND i PF T GIA G V RY VETDSLVDGTLA T A evdgegnvit VSSARTTN N T Y K E W LP S L NVNFD LTD DVIM 609
Cdd:COG4772 381 LAAYA QNR F -- ELTG - RL T LTP G L RY EHIRRDRTDRYS T R ---------- TGGDDSGS N S Y S E F LP G L GLLYQ LTD NLQL 447
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 610 RLSG S KTMTR P SLSE L RDV vvpnsgtvsdifvlgsaamndpslilta A GGNP Y L E P YT SWN LDMSFEWYFDDFGAFSI A G 689
Cdd:COG4772 448 YANV S RGFEP P TFGD L AYG ---------------------------- N GGNP D L K P EK SWN YELGTRGRIGNGLSAEV A L 499
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 690 FY K D V D DYI asdfetrtlpfavhd GS TLPVDVLV S SPA N V G DVAIS GLEL GFTGR L EM ---- GL GIS A TA T FATSKLE ld 765
Cdd:COG4772 500 FY I D Y D NEL --------------- GS CSAAGGDR S TFT N A G ETRHQ GLEL ALDYD L LK gggl GL PLF A AY T YTDAEFT -- 562
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 766 k SD V G VQT AG -- IQGISDQSYSISPF YE S G PFEI NL SYTWRDDYL TD GGV TV TSRPTEE d AT SY Y qkgig T LD MG ASY R F 843
Cdd:COG4772 563 - SD F G PVF AG nr LPYVPRHQLTAGLG YE H G GWTA NL NGRYVSEQF TD AAN TV ADGSFGK - IP SY T ----- V LD LS ASY D F 635
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 2526794198 844 AE N YEA F MQAV N ILEN R pst Y MG S edrlh QVH NY -------- G RTV NF G V R A KF 889
Cdd:COG4772 636 GK N LSL F AGVN N LFDK R --- Y IA S ----- RAP NY aagirpgp P RTV YA G L R L KF 681
Plug
pfam07715 TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently ...
21-130
6.56e-15
TonB-dependent Receptor Plug Domain; The Plug domain has been shown to be an independently folding subunit of the TonB-dependent receptors. It acts as the channel gate, blocking the pore until the channel is bound by ligand. At this point it under goes conformational changes opens the channel.
Pssm-ID: 462243 [Multi-domain]
Cd Length: 107
Bit Score: 71.53
E-value: 6.56e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 21 K R EGESISDA V V A A DI GKLP A V N V A E AL QR VPGV TIV - REA G E G QF IS V RG L G P N FQS V TLN G M PL AYN enirtsgq S G R 99
Cdd:pfam07715 2 L R DTPGSVSV V T A E DI EDQG A T N L A D AL RG VPGV SVS s GGG G G G SS IS I RG F G S N RVL V LVD G V PL NSG -------- G G G 73
90 100 110
....*....|....*....|....*....|..
gi 2526794198 100 QFRFRVLPADL I DG V V V S K A P - T A DMTE G G IG 130
Cdd:pfam07715 74 SVDLNSIDPED I ER V E V L K G P a S A LYGS G A IG 105
BtuB
COG4206 Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
4-325
5.30e-13
Outer membrane cobalamin receptor protein BtuB [Coenzyme transport and metabolism];
Pssm-ID: 443355 [Multi-domain]
Cd Length: 276
Bit Score: 70.29
E-value: 5.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 4 I VVT G T fagsldrsihvk R EGE S I SD AVVA ------ ADIGKLP A VNV A E AL Q RVPGV TIVREA G E G QF -- IS V RGLG P N F 75
Cdd:COG4206 1 V VVT A T ------------ R LEQ S K SD LTGS vtvida EELERSG A TSL A D AL R RVPGV QVSSSG G P G SA as IS I RGLG S N Q 68
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 76 QS V TLN G M PL aynenirt SGQ S GRQFRFRVL P A D L I DGVV V S K APTADM - TEGG IG SSVE I RMLNPLDRDPFLSTSFE G T 154
Cdd:COG4206 69 TL V LID G V PL -------- NDP S LGGVDLSLI P P D D I ERIE V L K GAASAL y GSDA IG GVIN I TTKKGKKGFKGSVSASY G S 140
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 155 YEE R adamspks AV SAS WQNSE G T F GVLGGV SY QE revqferl GN G WGVIGEEDV N DAE Y lhgvavpgdiqvtleqekr D 234
Cdd:COG4206 141 FGT R -------- RL SAS LSGGA G K F SYSLSA SY RR -------- SD G YRYNDPDLR N NDG Y ------------------- E 185
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 235 RM S AVGG L QWRPT DN FEFD L DMQ YS QFNNEIAERRLTYQTWGYWDN L DQSTAVIDDGR L V A GTLNGARIRNTTEF S DQAH 314
Cdd:COG4206 186 NT S LNAR L GYKLG DN GSLS L SGG YS DSERGYPGAVGSDRNLRLSLS L EYKLSDGWSLL L L A YYYYDRDYEDGGGD S AGTS 265
330
....*....|.
gi 2526794198 315 ENAIVI AG AE Y 325
Cdd:COG4206 266 NTDGAR AG LS Y 276
OMP_b-brl_3
pfam14905 Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB ...
518-886
2.32e-09
Outer membrane protein beta-barrel family; This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.
Pssm-ID: 434300 [Multi-domain]
Cd Length: 407
Bit Score: 60.36
E-value: 2.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 518 DLR N SYGVD E E I L AAYA rv DFASQIN di PFTGI AG V R YVE TD S lvdgtlataevdg E G NVI T VSS ar T TNNT Y KEWL PS L 597
Cdd:pfam14905 103 SRS N DFDYK E N I Y AAYA -- SYSKKFG -- KWSYQ AG L R AEY TD I ------------- D G DSV T TNE -- T FKRN Y FNLF PS A 163
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 598 NVNFD L T D DVIMR LS GSKTM -- T RPS LSE L R dvvv P NS g TV SD IFVLGS aamndpsliltaag GNP Y L E P YTSWNLDMSF 675
Cdd:pfam14905 164 SLSYK L N D NNSLQ LS LYYRR ii N RPS YWD L N ---- P FR - NY SD PYNYSQ -------------- GNP N L K P EYTNSFELGY 224
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 676 EW yfdd FGAF S IAGF Y KDVD D Y I ASD F E T RTLP favhdgstlpv D V LVSSPA N V G DVAIS GLEL GFTGRLEMGLGISATA 755
Cdd:pfam14905 225 TY ---- KWKL S LSLS Y RYTN D V I QQT F I T DDND ----------- N V TYTTYE N L G KSNSY GLEL SASFNPTKWWSLNGNL 289
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 756 TFATS K LEL D ksdvgvqtagiq G ISDQSY S ISP F YESGPFEIN L SYT W R ddyltd GGVTVTS R PTEEDAT s YYQ K GIGT L 835
Cdd:pfam14905 290 NGYYN K YKI D ------------ G SLNSDF S NFG F NWNLNNTFT L PKG W S ------ LQLNGNY R SPRVTGQ - GKI K PFYS L 350
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2526794198 836 D M G A S YR F A - ENYEAFMQAVN I LE - NRPSTYMGSEDRLH Q V --- HNYG R T V NFGVR 886
Cdd:pfam14905 351 D L G L S KS F L k KKLTLSLNVND I FN t RKFRSTTNYDNGFI Q S ynn KWDS R S V RLSLS 406
TonB-siderophor
TIGR01783 TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of ...
518-889
9.14e-08
TonB-dependent siderophore receptor; This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins]
Pssm-ID: 273805 [Multi-domain]
Cd Length: 651
Bit Score: 55.88
E-value: 9.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 518 DLR N SYGVDEE I LAAY A RVDFASQ I N D I P FTG i A GVRYVETDSL V -------- D GTLA T AEVDGEGNVITVSSAR --- T T 586
Cdd:TIGR01783 323 RFN N TGYPSDN I YSLT A TSSARTD I G D S P KDR - A LSSTTKALNG V alqrilla D KWTL T LGGRYDSVDVKSNNGV ags T G 401
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 587 NNTYKEWL PSL N V NFDL TDD V imrlsgsktmtrpslselrdvvvpn S GTV S DIFVLGSAA mndp SLILT A AGGNPY LEP Y 666
Cdd:TIGR01783 402 KRDDSQFT PSL G V AYKP TDD W ------------------------- S LYA S YAESFKPGG ---- YYPKG A GNSGDI LEP E 452
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 667 TSW N LDMSFEWYFD D FGAFSI A G F YKDV D DYIAS D FETR T LPF avhdgstlpvdvlvsspa N V G DVAIS G L EL GFT G R L E 746
Cdd:TIGR01783 453 KGK N YELGVRYDLG D SLLATA A L F RITK D NQLVQ D PVNG T FSV ------------------ N A G KTRNR G V EL EAR G Y L T 514
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 747 M GL GI SA TA T FATSKLE l DKSDVGV Q TAGIQGISDQSY S ISPF Y ESGPFEIN L SYTWRDD Y ltdggvtv T SRPTEEDATS 826
Cdd:TIGR01783 515 P GL SL SA GY T YTDAEFT - EDTNGDT Q GNTVPFVPKHTA S LWAS Y APPVGDNG L TLGGGVQ Y -------- T GKAYVDGGNT 585
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2526794198 827 YYQKGIGTL D MGAS Y RFAENYEAFMQ - A VN I L EN R p ST Y MGSEDRLHQVHN Y --- G RTV NFG V RAK F 889
Cdd:TIGR01783 586 GKVPSYTVV D LSVR Y DLTKKKNLTLA l N VN N L FD R - DY Y TSGYRWGPSAYI Y pga P RTV GLS V SYD F 651
PRK10064
PRK10064 catecholate siderophore receptor CirA; Provisional
2-124
1.46e-03
catecholate siderophore receptor CirA; Provisional
Pssm-ID: 236646 [Multi-domain]
Cd Length: 663
Bit Score: 42.18
E-value: 1.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2526794198 2 ET I VVT GTFAGS ldrsi HV K REGE SIS d AVVAA D IGKL P AV N VAEA L QR VPGV TIVR E AGEGQFI S V RGL GPNFQSVTLN 81
Cdd:PRK10064 31 ET M VVT ASAVEQ ----- NL K DAPA SIS - VITQE D LQRK P VQ N LKDV L KE VPGV QLTN E GDNRKGV S I RGL DSSYTLILID 104
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 2526794198 82 G MPL ayne N I R TSGQSGRQ F RFRVL P A D L I DGVV V SKA P TADM 124
Cdd:PRK10064 105 G KRV ---- N S R NAVFRHND F DLNWI P V D A I ERIE V VRG P MSSL 143
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
