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Conserved domains on  [gi|2527401228|ref|WP_288418942|]
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BLUF domain-containing protein [uncultured Acinetobacter sp.]

Protein Classification

BLUF domain-containing protein( domain architecture ID 10660064)

BLUF domain-containing protein similar to Rhodobacter sphaeroides transcriptional antirepressor AppA that senses both the light climate and the intracellular redox state

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BLUF smart01034
Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA ...
 4-97 1.84e-37

Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.


:

Pssm-ID: 198102  Cd Length: 92  Bit Score: 123.45  E-value: 1.84e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2527401228    4 VQLLYVSKTNSehHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFVQCLEGEEKTVHDIfYTKIIKDPRHQNCEILAS 83
Cdd:smart01034   2 HRLVYVSRARP--DLSPEDLEDILAQARRNNARLGITGVLLYNGGHFLQVLEGPEEAVEAL-YERIQRDPRHRDVQVLLY 78

                           90
                   ....*....|....
gi 2527401228   84 KYIDHSLFQRWSMK 97
Cdd:smart01034  79 EPIPERRFPDWSMG 92
 
Name Accession Description Interval E-value
BLUF smart01034
Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA ...
 4-97 1.84e-37

Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.


Pssm-ID: 198102  Cd Length: 92  Bit Score: 123.45  E-value: 1.84e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2527401228    4 VQLLYVSKTNSehHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFVQCLEGEEKTVHDIfYTKIIKDPRHQNCEILAS 83
Cdd:smart01034   2 HRLVYVSRARP--DLSPEDLEDILAQARRNNARLGITGVLLYNGGHFLQVLEGPEEAVEAL-YERIQRDPRHRDVQVLLY 78

                           90
                   ....*....|....
gi 2527401228   84 KYIDHSLFQRWSMK 97
Cdd:smart01034  79 EPIPERRFPDWSMG 92
BLUF pfam04940
Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA ...
 6-97 1.47e-33

Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.


Pssm-ID: 461495  Cd Length: 89  Bit Score: 113.37  E-value: 1.47e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2527401228   6 LLYVSKTNseHHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFVQCLEGEEKTVHDIfYTKIIKDPRHQNCEILASKY 85
Cdd:pfam04940   1 LIYVSRAA--ADLSEEDLADILEQSRRNNARLGITGVLLYDGGRFLQVLEGPEEAVDAL-YERIKRDPRHTDVTVLEEGP 77

                          90
                  ....*....|..
gi 2527401228  86 IDHSLFQRWSMK 97
Cdd:pfam04940  78 IEERRFPDWSMG 89
PRK08329 PRK08329
threonine synthase; Validated
 9-65 1.74e-04

threonine synthase; Validated


Pssm-ID: 236244 [Multi-domain]  Cd Length: 347  Bit Score: 40.19  E-value: 1.74e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2527401228   9 VSKTNSEHHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFvqcLEGEEKTVHDIF 65
Cdd:PRK08329  146 LSRLGAELHFVEGDRMEVHEEAVKFSKRNNIPYVSHWLNPYF---LEGTKTIAYEIY 199
 
Name Accession Description Interval E-value
BLUF smart01034
Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA ...
 4-97 1.84e-37

Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.


Pssm-ID: 198102  Cd Length: 92  Bit Score: 123.45  E-value: 1.84e-37
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2527401228    4 VQLLYVSKTNSehHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFVQCLEGEEKTVHDIfYTKIIKDPRHQNCEILAS 83
Cdd:smart01034   2 HRLVYVSRARP--DLSPEDLEDILAQARRNNARLGITGVLLYNGGHFLQVLEGPEEAVEAL-YERIQRDPRHRDVQVLLY 78

                           90
                   ....*....|....
gi 2527401228   84 KYIDHSLFQRWSMK 97
Cdd:smart01034  79 EPIPERRFPDWSMG 92
BLUF pfam04940
Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA ...
 6-97 1.47e-33

Sensors of blue-light using FAD; The BLUF domain has been shown to bind FAD in the AppA protein. AppA is involved in the repression of photosynthesis genes in response to blue-light.


Pssm-ID: 461495  Cd Length: 89  Bit Score: 113.37  E-value: 1.47e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2527401228   6 LLYVSKTNseHHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFVQCLEGEEKTVHDIfYTKIIKDPRHQNCEILASKY 85
Cdd:pfam04940   1 LIYVSRAA--ADLSEEDLADILEQSRRNNARLGITGVLLYDGGRFLQVLEGPEEAVDAL-YERIKRDPRHTDVTVLEEGP 77

                          90
                  ....*....|..
gi 2527401228  86 IDHSLFQRWSMK 97
Cdd:pfam04940  78 IEERRFPDWSMG 89
PRK08329 PRK08329
threonine synthase; Validated
 9-65 1.74e-04

threonine synthase; Validated


Pssm-ID: 236244 [Multi-domain]  Cd Length: 347  Bit Score: 40.19  E-value: 1.74e-04
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2527401228   9 VSKTNSEHHQIKNDLMEILTEAVQYNSRNGITGVLYYGNGYFvqcLEGEEKTVHDIF 65
Cdd:PRK08329  146 LSRLGAELHFVEGDRMEVHEEAVKFSKRNNIPYVSHWLNPYF---LEGTKTIAYEIY 199
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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