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Conserved domains on  [gi|2534209471|ref|WP_291117575|]
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ATP synthase F1 subunit gamma [Flavobacterium sp. UBA6135]

Protein Classification

F0F1 ATP synthase subunit gamma( domain architecture ID 10000722)

F0F1 ATP synthase subunit gamma is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.77e-140

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


:

Pssm-ID: 439994  Cd Length: 288  Bit Score: 396.83  E-value: 1.77e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEgEVGGAFTTQREIKKVLVV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP-EYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVIADSYA-GKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAeELIKELQAeGKEVELIVVGRKGRDFFKRRGiNVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.77e-140

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 396.83  E-value: 1.77e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEgEVGGAFTTQREIKKVLVV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP-EYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVIADSYA-GKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAeELIKELQAeGKEVELIVVGRKGRDFFKRRGiNVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-282 4.31e-131

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 373.01  E-value: 4.31e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   3 NLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEgEVGGAFTTQREIKKVLVVVI 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASP-EDSHPLLERREVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  83 TSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKTHEVV--ENRSDVYDDLTFDNVAQIAEHLTNLF 158
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELlaEGKEVKLIVVGRKGRDYFKKRGYEVilEFTGSLGDKPTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 159 TTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAP--LVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEH 236
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPeeEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2534209471 237 GARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEA 282
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-283 3.09e-123

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 353.26  E-value: 3.09e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEvgGAFTTQREIKKVLVV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--HPLLVEREVKRVGYI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKT-HEVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:PRK05621   79 VVTSDRGLCGGYNSNIIKKVLELIKELeaQGKEVKLIVIGRKGVDFFKRRgINVVAEYTGLGDQPTFEEAIGIAKKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEHG 237
Cdd:PRK05621  159 YDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQA 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2534209471 238 ARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK05621  239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-280 1.27e-116

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 336.47  E-value: 1.27e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   2 ANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLeGEVGGAFTTQREIKKVLVVV 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSL-DDEDPPLLEKREVKKVLLIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  82 ITSNRGLCGAFNSNVVKQAKVIADSYAGKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNLFTT 160
Cdd:cd12151    80 ITSDRGLCGGFNSNIIKAAEELIKEADGKEVKLIVVGKKGRDYLKRRGyNIALPFSDIGDDPTYFEAASIIEELILDFLN 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 161 GVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEHG 237
Cdd:cd12151   160 GEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeeEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQA 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 2534209471 238 ARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGA 280
Cdd:cd12151   240 ARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-283 7.56e-104

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 304.22  E-value: 7.56e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   2 ANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLeGEVGGAFTTQREIKKVLVVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKL-LNVDHPLLKSREVKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  82 ITSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNLF 158
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELkaAGKEVKLVVIGRKGKSFFKRRGdNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 159 TTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLV--GAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEH 236
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGpdEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2534209471 237 GARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
 
Name Accession Description Interval E-value
AtpG COG0224
FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP ...
 1-283 1.77e-140

FoF1-type ATP synthase, gamma subunit [Energy production and conversion]; FoF1-type ATP synthase, gamma subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 439994  Cd Length: 288  Bit Score: 396.83  E-value: 1.77e-140
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEgEVGGAFTTQREIKKVLVV 80
Cdd:COG0224     1 MASLKEIRRRIKSVKSTQKITKAMKMVAASKLRKAQERAEAARPYAEKLREVLAALAAASP-EYDHPLLEEREVKRVGLI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVIADSYA-GKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:COG0224    80 VITSDRGLCGGFNSNVLKAAeELIKELQAeGKEVELIVVGRKGRDFFKRRGiNVVAEFTGLSDKPSFEDAKEIAEELLDA 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:COG0224   160 FLAGEIDEVYLVYNRFVSAITQEPVVEQLLPLDPEeleEAEWETRADYIFEPSPEEILDALLPRYLESQIYQALLESAAS 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:COG0224   240 EHAARMTAMKNATDNAGELIDDLTLEYNRARQAAITQELSEIVGGAEAL 288
ATP-synt pfam00231
ATP synthase;
3-282 4.31e-131

ATP synthase;


Pssm-ID: 459722  Cd Length: 285  Bit Score: 373.01  E-value: 4.31e-131
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   3 NLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEgEVGGAFTTQREIKKVLVVVI 82
Cdd:pfam00231   1 SLKEIKRRIKSVKSTQKITKAMKMVAAAKLRKAQEALEAARPYAEKLQEVLADLAAASP-EDSHPLLERREVKKVGLIVI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  83 TSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKTHEVV--ENRSDVYDDLTFDNVAQIAEHLTNLF 158
Cdd:pfam00231  80 TSDRGLCGGFNSNVIKAARALIEELlaEGKEVKLIVVGRKGRDYFKKRGYEVilEFTGSLGDKPTFEEAAEIADELLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 159 TTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAP--LVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEH 236
Cdd:pfam00231 160 LAGEIDEVYLVYNRFVSAISQEPTVEQLLPLDPeeEEEEEESLADYEFEPSAEEVLDALLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2534209471 237 GARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEA 282
Cdd:pfam00231 240 AARMTAMDNATDNAGELIDKLTLQYNRARQAAITQELIEIVSGAEA 285
PRK05621 PRK05621
F0F1 ATP synthase subunit gamma; Validated
 1-283 3.09e-123

F0F1 ATP synthase subunit gamma; Validated


Pssm-ID: 235535  Cd Length: 284  Bit Score: 353.26  E-value: 3.09e-123
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEvgGAFTTQREIKKVLVV 80
Cdd:PRK05621    1 MASLKEIRRRIKSVKNTQKITKAMEMVAASKLRKAQERAEASRPYAEKIRKVISHLASASEYD--HPLLVEREVKRVGYI 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKT-HEVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:PRK05621   79 VVTSDRGLCGGYNSNIIKKVLELIKELeaQGKEVKLIVIGRKGVDFFKRRgINVVAEYTGLGDQPTFEEAIGIAKKLLDA 158

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEHG 237
Cdd:PRK05621  159 YDNGEFDELYIVYNKFVNTLSQEPTVEQLLPLEKEEEEEETSWDYEYEPDAEEILDALLPRYVESQIYQALLENKASEQA 238

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 2534209471 238 ARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK05621  239 ARMTAMKNATDNAGDLIKKLTLVYNRARQAAITQEITEIVGGAEAL 284
F1-ATPase_gamma cd12151
mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, ...
 2-280 1.27e-116

mitochondrial ATP synthase gamma subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain of F-ATPases is composed of alpha, beta, gamma, delta, and epsilon (not present in bacteria) subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain.


Pssm-ID: 213394  Cd Length: 282  Bit Score: 336.47  E-value: 1.27e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   2 ANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLeGEVGGAFTTQREIKKVLVVV 81
Cdd:cd12151     1 ASLKEIKRRIKSVKNTQKITKAMKMVAAAKLRKAQRALEAARPYAEKLEEVLQRLLSSL-DDEDPPLLEKREVKKVLLIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  82 ITSNRGLCGAFNSNVVKQAKVIADSYAGKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNLFTT 160
Cdd:cd12151    80 ITSDRGLCGGFNSNIIKAAEELIKEADGKEVKLIVVGKKGRDYLKRRGyNIALPFSDIGDDPTYFEAASIIEELILDFLN 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 161 GVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEHG 237
Cdd:cd12151   160 GEIDEVYIIYNKFKSAISQEPVVEQLLPLDKEeeeEESEGSRSDYIFEPDPEEVLDALLPFYLASLLYRALLESLASEQA 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 2534209471 238 ARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGA 280
Cdd:cd12151   240 ARMTAMDNATDNAGELIDKLTLEYNRARQAAITQELIEIVSGA 282
PRK13423 PRK13423
F0F1 ATP synthase subunit gamma; Provisional
 1-284 1.98e-109

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237384  Cd Length: 288  Bit Score: 318.15  E-value: 1.98e-109
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEvGGAFTTQREIKKVLVV 80
Cdd:PRK13423    1 MASLKDIKKRIVSVKNTRQITKAMKMVSAAKLRRAQENVVAARPYAAKLGEVLGSLAARAGED-AHPLLVPREVKKALLV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVIADSYAG-KQVDIFTIGKKGNDVLRKTHEVV-ENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:PRK13423   80 VVTSDRGLCGGFNSNLCKAAeRFLKENKDEfEEISLTTVGRKGREFLKNRGLIIrKNYGGVVANLTYETAALLAQELIEG 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTAS-SDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEH 236
Cdd:PRK13423  160 YLAGEYDEVYLVYNEFKSVMSQDITVQQLLPIDPPEAADDEYlPEYIYEPSRDALLAELLPKHVEVQIYRALLESVASEH 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*...
gi 2534209471 237 GARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEALN 284
Cdd:PRK13423  240 GARMTAMDSATKNATEMIGKLTLQYNRARQAAITTELMEIVSGAEALK 287
ATPsyn_F1gamma TIGR01146
ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in ...
 2-283 7.56e-104

ATP synthase, F1 gamma subunit; This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273469  Cd Length: 286  Bit Score: 304.22  E-value: 7.56e-104
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   2 ANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLeGEVGGAFTTQREIKKVLVVV 81
Cdd:TIGR01146   1 ATLKEIRTRIKSVKNTQKITKAMKMVAASKLRRAQERAEAARPYAEKIRAVLGNLATKL-LNVDHPLLKSREVKKVGILV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  82 ITSNRGLCGAFNSNVVKQAKVIADSY--AGKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNLF 158
Cdd:TIGR01146  80 ITSDRGLCGGYNSNVLKRVRARAKELkaAGKEVKLVVIGRKGKSFFKRRGdNIVLSITGLSDQPTFEEASGIADKLLDAF 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 159 TTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLV--GAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAEH 236
Cdd:TIGR01146 160 DAGEFDELYIVYNKFVSSISQEPTVKQLLPLSAQGpdEGFKFSQDYIFEPDEEEILDDLLPRYLESQIYGALLESAASEQ 239

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2534209471 237 GARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:TIGR01146 240 AARMTAMDNATDNAGDLIKKLTLSYNRARQAAITQELIEIVAGASAL 286
PRK13425 PRK13425
F0F1 ATP synthase subunit gamma; Provisional
 1-285 9.34e-97

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 139564  Cd Length: 291  Bit Score: 286.32  E-value: 9.34e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEVGGAFTTQREIKKVLVV 80
Cdd:PRK13425    1 MPTLKDIRVRIKGVKSTQQVTKAMKMVAAAKLRRAQERAIMARPYAAKLKEMLGSLSAKVDTSLNPLLSPRSEVNKVLVI 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVI----ADSYAGKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHL 154
Cdd:PRK13425   81 LITSDRGLCGAFNTNIIKLAqKVIhedyAALHAKGGVSMICAGTRGFDFFRKRGyNIVKGYPGVFQNLDFSVAKEIAETA 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 155 TNLFTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:PRK13425  161 SGMYLRGEVDKVVVVYNEFKSVLAPNLKSEVLLPITPEKPGAEGGSDYIYEPSPAAIIDELVPKHLNTQVWRMMLESNAA 240

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEALNN 285
Cdd:PRK13425  241 EQAARMTAMDSATENAKELLRTLNISYNRARQAAITKELSEIVAGADALQG 291
PRK13426 PRK13426
F0F1 ATP synthase subunit gamma; Provisional
 1-283 1.18e-90

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 237385  Cd Length: 291  Bit Score: 270.88  E-value: 1.18e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASlEGEVGGAFTTQREIKKVLVV 80
Cdd:PRK13426    1 MASLKEIKTRIASVQSTRKITSAMKMVASAKLHKAQGAIENMLPYQRKLNHILTNFLSA-DLDVESPFTVERPVKRVAIV 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQAKVIADSYAG---KQVDIFTIGKKGNDVLRK-THEVVENRSDVYDDLTFDNVAQIAEHLTN 156
Cdd:PRK13426   80 VFSSNTSLCGGFNANIIKLLLQTIGEYRTlgqDNILIYPVGKKIEEAVKKlGFKVQGDYQTLADKPSYEEAAALAMRLME 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 157 LFTTGVYDRIEIVYNQFKNAATQIVQTEQFLP--LAPLVGAVTA---SSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDS 231
Cdd:PRK13426  160 LFLEGEIDKVELIYHHFKSMGVQVLTRETYLPidLSQEKNAEHAggvANDYIIEPSADTVLNDLIPKLLSLKIYTALLDS 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2534209471 232 FAAEHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK13426  240 NASEHAARMVAMQIATDNANELLQELTLQYNKSRQQAITNELLDIVGGSMAN 291
PRK13424 PRK13424
F0F1 ATP synthase subunit gamma; Provisional
 1-283 1.10e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172047  Cd Length: 291  Bit Score: 253.13  E-value: 1.10e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEVGGAFTTQREIKKVLVV 80
Cdd:PRK13424    1 MPSLKDVKVKIAGVKKTKQITKAMNMVASAKLRGAQQRIERFRPYAEKFYDMLGDLASRADSSAHPLLEVREEIKTCGIV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQAKVIADSYA--GKQVDIFTIGKKGNDVLRKTH-EVVENRSDVYDDLTFDNVAQIAEHLTNL 157
Cdd:PRK13424   81 LITSDRGLCGSFNANLINAALKLAKQKTaeGKTVKFYCVGKKGRDAIRKTDfEIVTAYADQMTSFDFQLANSIGLEVIDG 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 158 FTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPL---VGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:PRK13424  161 YLTGELDEVVLVYGEFVSMARQLPITLQILPIAPEeaeEEEAGASSEYIYEPSVEGLLAELLPRFIKVQIYRGLLDTSAS 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK13424  241 EHAARMTAMDNATRNCDDMIGSLTLLYNKTRQASITRELMDIVGGAEAL 289
PRK14111 PRK14111
F0F1 ATP synthase subunit gamma; Provisional
 1-284 1.71e-83

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184515  Cd Length: 290  Bit Score: 252.41  E-value: 1.71e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEVGGAFTTQR--EIKKVL 78
Cdd:PRK14111    1 MPSTREIRRRIRSVKNTAQITRAMEMVSASKMRRAQRNVLATRPYADRIRDVMGDLTARTVGAARVGPLLEKrpTVKRVA 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  79 VVVITSNRGLCGAFNSNVVKQA-KVIADSYA-GKQVDIFTIGKKGND-VLRKTHEVVENRSDVYDDLTFDNVAQIAEHLT 155
Cdd:PRK14111   81 LILVTPDRGLAGSLNANVLRRAiRFITDERSmGRTVDVIAIGRKGRDfMVRTGQALVAEFTRLGDAPKLEAILPVATSAI 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 156 NLFTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAAE 235
Cdd:PRK14111  161 NGFQSGKYDEVYVLYSEFINTLVQRPTIKQLLPIEPPEISTTTVVDYTYEPSPEEVLRALLPRFVEVQLYQAVLESIASE 240

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 2534209471 236 HGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEALN 284
Cdd:PRK14111  241 HSARMVAMRNATDNAKELVRDLTLTYNKARQAAITKEVSEIASGAAALG 289
PRK13427 PRK13427
F0F1 ATP synthase subunit gamma; Provisional
 1-284 3.08e-69

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 172049  Cd Length: 289  Bit Score: 215.96  E-value: 3.08e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLsASLEGEVGGAFTTQRE-IKKVLV 79
Cdd:PRK13427    1 MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKATDRVNAAHPYANKIKELVSSL-ASLEGVVHSPYLRRPEkIRTVAL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  80 VVITSNRGLCGAFNSNVVKQAKV-IAD-SYAGKQVDIFTIGKKGNDVLRKTHEVVE-NRSDVYDDLTFDNVAQIAEHLTN 156
Cdd:PRK13427   80 LIITANRGLCGGFNSNLNRMAKArIAElKKKGVNVELHIVGKKGISFFKFAGEKAEkTYTHIDDKSGYKEAEELANLFME 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 157 LFTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVGAVTASS--DYIFEPSKEEIVITLIPKSLKTQLYKSIRDSFAA 234
Cdd:PRK13427  160 RFANESVDAVEIASTVYYSAASQKPETTRVLPLEPPTAAAEGSVqdDVVYEPSPEAILESLLPLVVKTAFLKAILEANAS 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 2534209471 235 EHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEALN 284
Cdd:PRK13427  240 EQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVGGADALN 289
PRK14110 PRK14110
F0F1 ATP synthase subunit gamma; Provisional
 1-283 2.31e-64

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184514  Cd Length: 291  Bit Score: 203.46  E-value: 2.31e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANL--KEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASLEGEVGGAFTtQREIKKVL 78
Cdd:PRK14110    1 MAKLspRDIKRKIQGIKNTRRITNAMKVVSAAKLRKAQELLYASRPYSEKLYELISDLAAHIDRESHPLLE-RREEKNVD 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  79 VVVITSNRGLCGAFNSNVVKQA--KVIADSYAGKQVDIFTIGKKGNDVL-RKTHEVVENRSDVY-DDLTFDNVAQIAEHL 154
Cdd:PRK14110   80 LVIITADRGLAGAFNSNVIKTAerLIQEKQSEGVRVNLILIGRKGVQYFsKRGYNIIKSYEDVFrKEINFSVVKEVGGIL 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 155 TNLFTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVG--AVTASSDYIFEPSKEEIVITLIPKSLKTQLYKSIRDSF 232
Cdd:PRK14110  160 ASRYIEEETDAVYLINNEMITRATYKPKVRKFLPFEVEAQekKLDELSVYNIEVSEEEFLDKLLQLYLNYQLYRALVESN 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2534209471 233 AAEHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK14110  240 AAEHFARMVAMDNATRNAGELIRKWTLIFNKARQEAITTELIDIVNAAEAM 290
PRK13422 PRK13422
F0F1 ATP synthase subunit gamma; Provisional
 1-283 4.96e-37

F0F1 ATP synthase subunit gamma; Provisional


Pssm-ID: 184046  Cd Length: 298  Bit Score: 133.25  E-value: 4.96e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471   1 MANLKEIRNRITSVSSTMQITSAMKMVSAAKLKKAQDAITAMRPYAEKLTELLQSLSASlEGEVGGAFTTQREIKKVLVV 80
Cdd:PRK13422    1 MSNAREIRSKVQSVKNTQKITGAMELVAASKMRGAIVKMNNVRPYVESANTIIKNVTAA-SIDYPNPYLFDRDVKRVGYI 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471  81 VITSNRGLCGAFNSNVVKQA-KVIADSYAGK-QVDIFTIGKKGNDVLRKTHEVVENRSDVYDDL----TFDNVAQIAEHL 154
Cdd:PRK13422   80 VTSTDRGLCGGLNINLFKHVlKEIKNNIEDRvGVDVCVIGSKAENFFAKLKDVNIVATAHYNDKdkegSIRAIGGAVKVM 159

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2534209471 155 TNLFTTGVYDRIEIVYNQFKNAATQIVQTEQFLPLAPLVG----------AVTASSDYIFEPSKEEIVITLIPKSLKTQL 224
Cdd:PRK13422  160 LDKFTAGEIDRLYMSSNQFVSTIKQRPRLQTLLPIQDIFSaeeikankekATKGHWDYIYERDIEEVLNALCIRYIEAQV 239

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2534209471 225 YKSIRDSFAAEHGARMTAMHKATDNATELRNQLKLTYNKARQAAITNEILEIVGGAEAL 283
Cdd:PRK13422  240 RGAILENAACEQAARMMAMKNATDNASDIIDQLKLDYNKVRQAMITQELAEICSGAAAV 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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