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Conserved domains on  [gi|2536340203|ref|WP_293090236|]
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polysaccharide biosynthesis tyrosine autokinase, partial [Moorena sp. SIO3H5]

Protein Classification

polysaccharide biosynthesis tyrosine autokinase( domain architecture ID 13405342)

polysaccharide biosynthesis tyrosine autokinase catalyzes the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylates endogenous protein substrates by using ATP as phosphoryl donor; may also be involved in the production and transport of exopolysaccharides

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BY-kinase cd05387
bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on ...
 106-295 4.32e-61

bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.


:

Pssm-ID: 349772 [Multi-domain]  Cd Length: 190  Bit Score: 192.40  E-value: 4.32e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 106 EAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLI 185
Cdd:cd05387     1 EAFRTLRTNLLFAGSDAGPKVIAVTSASPGEGKSTVAANLAVALAQSGKRVLLIDADLRRPSLHRLLGLPNEPGLSEVLS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 186 GNLNLSHVItQSPTEQNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVV 265
Cdd:cd05387    81 GQASLEDVI-QSTNIPNLDVLPAGTVPPNPSELLSSPRFAELLEELKEQYDYVIIDTPPVLAVADALILAPLVDGVLLVV 159

                         170       180       190
                  ....*....|....*....|....*....|
gi 2536340203 266 GLGKTPRPTWEKALEEVKAAQIKIIGIVTN 295
Cdd:cd05387   160 RAGKTRRREVKEALERLEQAGAKVLGVVLN 189
YveK super family cl34698
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];
10-180 7.38e-08

Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];


The actual alignment was detected with superfamily member COG3944:

Pssm-ID: 443144 [Multi-domain]  Cd Length: 309  Bit Score: 52.76  E-value: 7.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPKIPL-IAVSIIAGLLLGSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKELQNLPQpksdvvqlnphkitqs 88
Cdd:COG3944   162 PVSPNPKLnLAIGLVLGLLLGVGLAFLRELLDTTIRSEEDIERLLGLLLGGAVPAARSARPLLL---------------- 225

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 stevspkhQSRIESPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQI 168
Cdd:COG3944   226 --------LLADASPRAAAARRRRRNLLFALAAVDARTVVVVSSSLSEGKSTTTAALALALAAAAAGVVLVLADLDRRRR 297

                         170
                  ....*....|..
gi 2536340203 169 HEKIGLTNNQGL 180
Cdd:COG3944   298 VALLGLLEGAGL 309
 
Name Accession Description Interval E-value
BY-kinase cd05387
bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on ...
 106-295 4.32e-61

bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.


Pssm-ID: 349772 [Multi-domain]  Cd Length: 190  Bit Score: 192.40  E-value: 4.32e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 106 EAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLI 185
Cdd:cd05387     1 EAFRTLRTNLLFAGSDAGPKVIAVTSASPGEGKSTVAANLAVALAQSGKRVLLIDADLRRPSLHRLLGLPNEPGLSEVLS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 186 GNLNLSHVItQSPTEQNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVV 265
Cdd:cd05387    81 GQASLEDVI-QSTNIPNLDVLPAGTVPPNPSELLSSPRFAELLEELKEQYDYVIIDTPPVLAVADALILAPLVDGVLLVV 159

                         170       180       190
                  ....*....|....*....|....*....|
gi 2536340203 266 GLGKTPRPTWEKALEEVKAAQIKIIGIVTN 295
Cdd:cd05387   160 RAGKTRRREVKEALERLEQAGAKVLGVVLN 189
Mrp COG0489
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, ...
 126-295 1.69e-55

Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440255 [Multi-domain]  Cd Length: 289  Bit Score: 181.54  E-value: 1.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 126 SIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPTEqNLFV 205
Cdd:COG0489    94 VIAVTSGKGGEGKSTVAANLALALAQSGKRVLLIDADLRGPSLHRMLGLENRPGLSDVLAGEASLEDVIQPTEVE-GLDV 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 206 VTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAA 285
Cdd:COG0489   173 LPAGPLPPNPSELLASKRLKQLLEELRGRYDYVIIDTPPGLGVADATLLASLVDGVLLVVRPGKTALDDVRKALEMLEKA 252

                         170
                  ....*....|
gi 2536340203 286 QIKIIGIVTN 295
Cdd:COG0489   253 GVPVLGVVLN 262
eps_fam TIGR01007
capsular exopolysaccharide family; This model describes the capsular exopolysaccharide ...
 106-298 2.50e-39

capsular exopolysaccharide family; This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273392 [Multi-domain]  Cd Length: 204  Bit Score: 136.80  E-value: 2.50e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 106 EAFCSLYTRFQSRRGDIpfKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTN-NQGLSDVL 184
Cdd:TIGR01007   1 EYYNAIRTNIQFSGAEI--KVLLITSVKPGEGKSTTSANIAIAFAQAGYKTLLIDGDMRNSVMSGTFKSQNkITGLTNFL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 185 IGNLNLSHVITQSPTEqNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILV 264
Cdd:TIGR01007  79 SGTTDLSDAICDTNIE-NLDVITAGPVPPNPTELLQSSNFKTLIETLRKRFDYIIIDTPPIGTVTDAAIIARACDASILV 157

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2536340203 265 VGLGKTPRPTWEKALEEVKAAQIKIIGIVTNSLN 298
Cdd:TIGR01007 158 TDAGKIKKREVKKAKEQLEQAGSNFLGVVLNKVD 191
PRK09841 PRK09841
tyrosine-protein kinase;
127-301 2.33e-26

tyrosine-protein kinase;


Pssm-ID: 182106 [Multi-domain]  Cd Length: 726  Bit Score: 108.84  E-value: 2.33e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVItQSPTEQNLFVV 206
Cdd:PRK09841  534 LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVI-QHFGKGGFDVI 612

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 207 TAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAAQ 286
Cdd:PRK09841  613 TRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAG 692

                         170
                  ....*....|....*
gi 2536340203 287 IKIIGIVTNSLNKKA 301
Cdd:PRK09841  693 VNIKGAILNGVIKRA 707
AAA_31 pfam13614
AAA domain; This family includes a wide variety of AAA domains including some that have lost ...
 125-254 1.06e-11

AAA domain; This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.


Pssm-ID: 433350 [Multi-domain]  Cd Length: 177  Bit Score: 62.22  E-value: 1.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhPQIH-------EKIGLTNNqgLSDVLIGNLNLSHVITQS 197
Cdd:pfam13614   2 KVIAIANQKGGVGKTTTSVNLAAALAKKGKKVLLIDLD---PQGNatsglgiDKNNVEKT--IYELLIGECNIEEAIIKT 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2536340203 198 PTEqNLFVVTAGTMLPNPSKLFSS-----SRMQNIMEIAKTSFDLVVYDTSQILGVLDSNIL 254
Cdd:pfam13614  77 VIE-NLDLIPSNIDLAGAEIELIGienreNILKEALEPVKDNYDYIIIDCPPSLGLLTINAL 137
YveK COG3944
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];
10-180 7.38e-08

Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443144 [Multi-domain]  Cd Length: 309  Bit Score: 52.76  E-value: 7.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPKIPL-IAVSIIAGLLLGSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKELQNLPQpksdvvqlnphkitqs 88
Cdd:COG3944   162 PVSPNPKLnLAIGLVLGLLLGVGLAFLRELLDTTIRSEEDIERLLGLLLGGAVPAARSARPLLL---------------- 225

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 stevspkhQSRIESPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQI 168
Cdd:COG3944   226 --------LLADASPRAAAARRRRRNLLFALAAVDARTVVVVSSSLSEGKSTTTAALALALAAAAAGVVLVLADLDRRRR 297

                         170
                  ....*....|..
gi 2536340203 169 HEKIGLTNNQGL 180
Cdd:COG3944   298 VALLGLLEGAGL 309
 
Name Accession Description Interval E-value
BY-kinase cd05387
bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on ...
 106-295 4.32e-61

bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.


Pssm-ID: 349772 [Multi-domain]  Cd Length: 190  Bit Score: 192.40  E-value: 4.32e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 106 EAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLI 185
Cdd:cd05387     1 EAFRTLRTNLLFAGSDAGPKVIAVTSASPGEGKSTVAANLAVALAQSGKRVLLIDADLRRPSLHRLLGLPNEPGLSEVLS 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 186 GNLNLSHVItQSPTEQNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVV 265
Cdd:cd05387    81 GQASLEDVI-QSTNIPNLDVLPAGTVPPNPSELLSSPRFAELLEELKEQYDYVIIDTPPVLAVADALILAPLVDGVLLVV 159

                         170       180       190
                  ....*....|....*....|....*....|
gi 2536340203 266 GLGKTPRPTWEKALEEVKAAQIKIIGIVTN 295
Cdd:cd05387   160 RAGKTRRREVKEALERLEQAGAKVLGVVLN 189
Mrp COG0489
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, ...
 126-295 1.69e-55

Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440255 [Multi-domain]  Cd Length: 289  Bit Score: 181.54  E-value: 1.69e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 126 SIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPTEqNLFV 205
Cdd:COG0489    94 VIAVTSGKGGEGKSTVAANLALALAQSGKRVLLIDADLRGPSLHRMLGLENRPGLSDVLAGEASLEDVIQPTEVE-GLDV 172

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 206 VTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAA 285
Cdd:COG0489   173 LPAGPLPPNPSELLASKRLKQLLEELRGRYDYVIIDTPPGLGVADATLLASLVDGVLLVVRPGKTALDDVRKALEMLEKA 252

                         170
                  ....*....|
gi 2536340203 286 QIKIIGIVTN 295
Cdd:COG0489   253 GVPVLGVVLN 262
eps_fam TIGR01007
capsular exopolysaccharide family; This model describes the capsular exopolysaccharide ...
 106-298 2.50e-39

capsular exopolysaccharide family; This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273392 [Multi-domain]  Cd Length: 204  Bit Score: 136.80  E-value: 2.50e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 106 EAFCSLYTRFQSRRGDIpfKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTN-NQGLSDVL 184
Cdd:TIGR01007   1 EYYNAIRTNIQFSGAEI--KVLLITSVKPGEGKSTTSANIAIAFAQAGYKTLLIDGDMRNSVMSGTFKSQNkITGLTNFL 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 185 IGNLNLSHVITQSPTEqNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILV 264
Cdd:TIGR01007  79 SGTTDLSDAICDTNIE-NLDVITAGPVPPNPTELLQSSNFKTLIETLRKRFDYIIIDTPPIGTVTDAAIIARACDASILV 157

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2536340203 265 VGLGKTPRPTWEKALEEVKAAQIKIIGIVTNSLN 298
Cdd:TIGR01007 158 TDAGKIKKREVKKAKEQLEQAGSNFLGVVLNKVD 191
eps_transp_fam TIGR01005
exopolysaccharide transport protein family; The model describes the exopolysaccharide ...
 10-298 2.87e-37

exopolysaccharide transport protein family; The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]


Pssm-ID: 273391 [Multi-domain]  Cd Length: 764  Bit Score: 140.63  E-value: 2.87e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPK-IPLIAVSIIAGLLLGSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKELQNLPQPKSDVVQLNPHKITQS 88
Cdd:TIGR01005 432 PSKPKkLMTLALAAVLGMMLGGAAAAFLEALEGGFRDEGDIEEHLGHRSLATVPLLDTQMDKKAQLTHAHFGSVKRHDEA 511

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 STEVSPKHQ-SRI-----ESPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDAN 162
Cdd:TIGR01005 512 VDDTMPFQLlARIvpdapRSTFAEAFRNAKLACDFALADAENNLIAIAGALPDEGKSFIAANFAALIAAGGKRTLLIDAD 591

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 163 LHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPTEQNLFVVTAGTML--PNPSKLFSSSRMQNIMEIAKTSFDLVVY 240
Cdd:TIGR01005 592 IRKGGLHQMFGKAPKPGLLDLLAGEASIEAGIHRDQRPGLAFIAAGGASHfpHNPNELLANPAMAELIDNARNAFDLVLV 671

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2536340203 241 DTSQILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAAQIKIIGIVTNSLN 298
Cdd:TIGR01005 672 DLAALAAVADAAAFAALADGILFVTEFERSPLGEIRDLIHQEPHANSDVLGVIFNALD 729
PRK09841 PRK09841
tyrosine-protein kinase;
127-301 2.33e-26

tyrosine-protein kinase;


Pssm-ID: 182106 [Multi-domain]  Cd Length: 726  Bit Score: 108.84  E-value: 2.33e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVItQSPTEQNLFVV 206
Cdd:PRK09841  534 LMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVI-QHFGKGGFDVI 612

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 207 TAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAAQ 286
Cdd:PRK09841  613 TRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAG 692

                         170
                  ....*....|....*
gi 2536340203 287 IKIIGIVTNSLNKKA 301
Cdd:PRK09841  693 VNIKGAILNGVIKRA 707
PRK11519 PRK11519
tyrosine-protein kinase Wzc;
10-301 3.11e-23

tyrosine-protein kinase Wzc;


Pssm-ID: 183173 [Multi-domain]  Cd Length: 719  Bit Score: 99.46  E-value: 3.11e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPKIPLIAV-SIIAGLLLgSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKElqnlpQPKSDVVQLNPHKITQS 88
Cdd:PRK11519  419 VLKPKKALIILgAIILGLML-SIVGVLLRSLFNRGIESPQVLEEHGISVYASIPLSEW-----QKARDSVKTIKGIKRYK 492

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 STEV----SPKhqsrieSPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLH 164
Cdd:PRK11519  493 QSQLlavgNPT------DLAIEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR 566

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 165 HPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPTEqNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQ 244
Cdd:PRK11519  567 KGYTHELLGTNNVNGLSDILIGQGDITTAAKPTSIA-NFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPP 645

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2536340203 245 ILGVLDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAAQIKIIGIVTNSLNKKA 301
Cdd:PRK11519  646 ILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRA 702
FlhG COG0455
MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell ...
 140-274 1.87e-18

MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell division, chromosome partitioning, Cell motility];


Pssm-ID: 440223 [Multi-domain]  Cd Length: 230  Bit Score: 82.24  E-value: 1.87e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 140 TIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPteQNLFVVTAGTMLPNPSKLF 219
Cdd:COG0455     1 TVAVNLAAALARLGKRVLLVDADLGLANLDVLLGLEPKATLADVLAGEADLEDAIVQGP--GGLDVLPGGSGPAELAELD 78

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2536340203 220 SSSRMQNIMEIAKTSFDLVVYDTSqiLGVLDSNILAQQL-DGTILVVglgkTPRPT 274
Cdd:COG0455    79 PEERLIRVLEELERFYDVVLVDTG--AGISDSVLLFLAAaDEVVVVT----TPEPT 128
GumC COG3206
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
10-301 3.75e-14

Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442439 [Multi-domain]  Cd Length: 687  Bit Score: 72.74  E-value: 3.75e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPKIPLI-AVSIIAGLLLGSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKELQNLPQPKSDVVQLnphkitqs 88
Cdd:COG3206   400 PVSPKKLLIlALGLLLGLLLGLGLALLLELLDRTIEEELELLLLLGLPLLGPLPPLKSKRERRRARLALLLL-------- 471

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 stevspkhQSRIESPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQI 168
Cdd:COG3206   472 --------AAALAALLALLLALLLLLLLLLLLLLVSSSSGGGSSSTSSALAAASAAAAAAAALLLLLLLLLLLDLLLLLL 543

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 169 HEKIGLTNNQGLSDVLIGNLNLSHVITQSPTEQNLFVVTAGTMLPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGV 248
Cdd:COG3206   544 LLLLLLLLLLGGLLLLLLLLLLLLLLLLLLLLLLLLLLPPPLLLPLLLLLLLLLLLLLLLLLLLLSDDLILDLVPLLAAL 623

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2536340203 249 LDSNILAQQLDGTILVVGLGKTPRPTWEKALEEVKAAQIKIIGIVTNSLNKKA 301
Cdd:COG3206   624 LAAAVLAVLVVVLLLVVALVALARLALLAAALLLLLVLVVVGGVVLGGVVYGY 676
ParA COG1192
ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein ...
 125-255 4.41e-14

ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility];


Pssm-ID: 440805 [Multi-domain]  Cd Length: 253  Bit Score: 70.27  E-value: 4.41e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhPQIHEKIGL-----TNNQGLSDVLIGNLNLSHVITQSPT 199
Cdd:COG1192     2 KVIAVANQKGGVGKTTTAVNLAAALARRGKRVLLIDLD---PQGNLTSGLgldpdDLDPTLYDLLLDDAPLEDAIVPTEI 78

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2536340203 200 EqNLFVVTAGTMLPN-----PSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILA 255
Cdd:COG1192    79 P-GLDLIPANIDLAGaeielVSRPGRELRLKRALAPLADDYDYILIDCPPSLGLLTLNALA 138
FlhG-like cd02038
MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) ...
 125-274 7.21e-14

MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) is a major determinant for a variety of flagellation patterns. It effects location and number of bacterial flagella during C-ring assembly.


Pssm-ID: 349758 [Multi-domain]  Cd Length: 230  Bit Score: 69.52  E-value: 7.21e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSDVLIGNLNLSHVITQSPteQNLF 204
Cdd:cd02038     1 RIIAVTSGKGGVGKTNVSANLALALSKLGKRVLLLDADLGLANLDILLGLAPKKTLGDVLKGRVSLEDIIVEGP--EGLD 78

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2536340203 205 VVTAGTMLPNPSKLFSSSRMQNIMEIAK--TSFDLVVYDTSQILG--VLDSNILAQQLdgtILVVglgkTPRPT 274
Cdd:cd02038    79 IIPGGSGMEELANLDPEQKAKLIEELSSleSNYDYLLIDTGAGISrnVLDFLLAADEV---IVVT----TPEPT 145
CpaE COG4963
Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular ...
 104-256 8.58e-14

Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];


Pssm-ID: 443989 [Multi-domain]  Cd Length: 358  Bit Score: 70.91  E-value: 8.58e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 104 LLEAFCSLYTRFQSRRGdipfKSIAIASATTGDGKSTIAINLA-QMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLSD 182
Cdd:COG4963    86 LRAALARLLDPGAARRG----RVIAVVGAKGGVGATTLAVNLAwALARESGRRVLLVDLDLQFGDVALYLDLEPRRGLAD 161

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2536340203 183 VL--IGNLN---LSHVITQSPTeqNLFVVTAGTMlPNPSKLFSSSRMQNIMEIAKTSFDLVVYDTSQILGVLDSNILAQ 256
Cdd:COG4963   162 ALrnPDRLDetlLDRALTRHSS--GLSVLAAPAD-LERAEEVSPEAVERLLDLLRRHFDYVVVDLPRGLNPWTLAALEA 237
AAA_31 pfam13614
AAA domain; This family includes a wide variety of AAA domains including some that have lost ...
 125-254 1.06e-11

AAA domain; This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.


Pssm-ID: 433350 [Multi-domain]  Cd Length: 177  Bit Score: 62.22  E-value: 1.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhPQIH-------EKIGLTNNqgLSDVLIGNLNLSHVITQS 197
Cdd:pfam13614   2 KVIAIANQKGGVGKTTTSVNLAAALAKKGKKVLLIDLD---PQGNatsglgiDKNNVEKT--IYELLIGECNIEEAIIKT 76

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2536340203 198 PTEqNLFVVTAGTMLPNPSKLFSS-----SRMQNIMEIAKTSFDLVVYDTSQILGVLDSNIL 254
Cdd:pfam13614  77 VIE-NLDLIPSNIDLAGAEIELIGienreNILKEALEPVKDNYDYIIIDCPPSLGLLTINAL 137
CbiA pfam01656
CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid ...
 127-295 6.03e-09

CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyze amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.


Pssm-ID: 426369 [Multi-domain]  Cd Length: 228  Bit Score: 55.43  E-value: 6.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDA-----NLHHPQIHEKIGLTnNQGLSDVLIGNLNLSHVITQSP-TE 200
Cdd:pfam01656   1 IAIAGTKGGVGKTTLAANLARALARRGLRVLLIDLdpqsnNSSVEGLEGDIAPA-LQALAEGLKGRVNLDPILLKEKsDE 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 201 QNLFVVTAGTMLPNPSKLFS----SSRMQNIMEIAKTSFDLVVYDT------SQILGVLDSNILAQQLD-GTILVVGLGK 269
Cdd:pfam01656  80 GGLDLIPGNIDLEKFEKELLgprkEERLREALEALKEDYDYVIIDGapglgeLLRNALIAADYVIIPLEpEVILVEDAKR 159

                         170       180
                  ....*....|....*....|....*.
gi 2536340203 270 TPRpTWEKALEEVKAAQIKIIGIVTN 295
Cdd:pfam01656 160 LGG-VIAALVGGYALLGLKIIGVVLN 184
YveK COG3944
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];
10-180 7.38e-08

Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443144 [Multi-domain]  Cd Length: 309  Bit Score: 52.76  E-value: 7.38e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  10 PVSPKIPL-IAVSIIAGLLLGSLAAFGIENVNNVFYDSEDVKNESQLPLLGVIPFTKELQNLPQpksdvvqlnphkitqs 88
Cdd:COG3944   162 PVSPNPKLnLAIGLVLGLLLGVGLAFLRELLDTTIRSEEDIERLLGLLLGGAVPAARSARPLLL---------------- 225

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203  89 stevspkhQSRIESPLLEAFCSLYTRFQSRRGDIPFKSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQI 168
Cdd:COG3944   226 --------LLADASPRAAAARRRRRNLLFALAAVDARTVVVVSSSLSEGKSTTTAALALALAAAAAGVVLVLADLDRRRR 297

                         170
                  ....*....|..
gi 2536340203 169 HEKIGLTNNQGL 180
Cdd:COG3944   298 VALLGLLEGAGL 309
MinD cd02036
septum site-determining protein MinD; Septum site-determining protein MinD is part of the ...
 125-241 2.64e-07

septum site-determining protein MinD; Septum site-determining protein MinD is part of the operon MinCDE that determines the site of the formation of a septum at mid-cell, an important part of bacterial cell division. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein.


Pssm-ID: 349756 [Multi-domain]  Cd Length: 236  Bit Score: 50.66  E-value: 2.64e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhpqihekIGLTN-----------NQGLSDVLIGNLNLSHV 193
Cdd:cd02036     1 RVIVITSGKGGVGKTTTTANLGVALAKLGKKVLLIDAD---------IGLRNldlilglenriVYTLVDVLEGECRLEQA 71

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2536340203 194 ITQSPTEQNLFVVTAGTMLPNPSklFSSSRMQNIMEIAKTSFDLVVYD 241
Cdd:cd02036    72 LIKDKRWENLYLLPASQTRDKDA--LTPEKLEELVKELKDSFDFILID 117
Mrp_NBP35 cd02037
Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically ...
 127-295 3.37e-07

Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically iron-sulfur (FeS) cluster scaffolds that function to assemble nascent FeS clusters for transfer to FeS-requiring enzymes. Members include the eukaryotic nucleotide-binding protein 1 (NUBP1) which is a component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery and the archael [NiFe] hydrogenase maturation protein HypB which is required for nickel insertion into [NiFe] hydrogenase.


Pssm-ID: 349757 [Multi-domain]  Cd Length: 213  Bit Score: 49.81  E-value: 3.37e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNnqglSDVLIGNLNLSHVITqspteQNLFVV 206
Cdd:cd02037     3 IAVLSGKGGVGKSTVAVNLALALAKKGYKVGLLDADIYGPSIPRLLGVEG----KPLHQSEEGIVPVEV-----GGIKVM 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 207 TAGTMLP-NPSKLFSSSRMQNIME--IAKTSF---DLVVYD----TSQILGVLDSNIlaqQLDGTILVVglgkTPRPT-- 274
Cdd:cd02037    74 SIGFLLPeDDAVIWRGPMKSGAIKqfLKDVDWgelDYLIIDlppgTGDEHLSLVQLI---PIDGAVVVT----TPQEVsl 146

                         170       180
                  ....*....|....*....|...
gi 2536340203 275 --WEKALEEVKAAQIKIIGIVTN 295
Cdd:cd02037   147 idVRKAIDMCKKLNIPVLGIVEN 169
ParAB_family cd02042
partition proteins ParAB family; ParA and ParB of Caulobacter crescentus belong to a conserved ...
 125-167 6.34e-07

partition proteins ParAB family; ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.


Pssm-ID: 349760 [Multi-domain]  Cd Length: 130  Bit Score: 47.53  E-value: 6.34e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhPQ 167
Cdd:cd02042     1 KVIAVANQKGGVGKTTLAVNLAAALALRGKRVLLIDLD---PQ 40
CpaE-like cd03111
pilus assembly ATPase CpaE; This protein family consists of proteins similar to the cpaE ...
 125-163 8.79e-06

pilus assembly ATPase CpaE; This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.


Pssm-ID: 349765 [Multi-domain]  Cd Length: 235  Bit Score: 46.12  E-value: 8.79e-06
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQ-MAAEAGQKVLLVDANL 163
Cdd:cd03111     1 RVVAVVGAKGGVGASTLAVNLAQeLAQRAKDKVLLIDLDL 40
SIMIBI cd01983
SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal ...
 125-160 1.36e-05

SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal recognition particle, MinD, and BioD), consists of signal recognition particle (SRP) GTPases, the assemblage of MinD-like ATPases, which are involved in protein localization, chromosome partitioning, and membrane transport, and a group of metabolic enzymes with kinase or related phosphate transferase activity. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.


Pssm-ID: 349751 [Multi-domain]  Cd Length: 107  Bit Score: 43.19  E-value: 1.36e-05
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVD 160
Cdd:cd01983     1 RVIAVTGGKGGVGKTTLAAALAVALAAKGYKVLLID 36
ParA pfam10609
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid ...
 127-178 1.44e-05

NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.


Pssm-ID: 431392 [Multi-domain]  Cd Length: 246  Bit Score: 45.52  E-value: 1.44e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQ 178
Cdd:pfam10609   6 IAVASGKGGVGKSTVAVNLALALARLGYKVGLLDADIYGPSIPRMLGLEGER 57
PRK11670 PRK11670
iron-sulfur cluster carrier protein ApbC;
127-181 6.52e-05

iron-sulfur cluster carrier protein ApbC;


Pssm-ID: 183270 [Multi-domain]  Cd Length: 369  Bit Score: 43.88  E-value: 6.52e-05
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2536340203 127 IAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANLHHPQIHEKIGLTNNQGLS 181
Cdd:PRK11670  110 IAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAEDQRPTS 164
ArsA COG0003
Anion-transporting ATPase, ArsA/GET3 family [Inorganic ion transport and metabolism];
137-242 3.11e-04

Anion-transporting ATPase, ArsA/GET3 family [Inorganic ion transport and metabolism];


Pssm-ID: 439774  Cd Length: 299  Bit Score: 41.73  E-value: 3.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2536340203 137 GKSTIAINLAQMAAEAGQKVLLV--DANlHHpqihekigltnnqgLSDVLigNLNLSHVITQSPTEqNLFVV-------- 206
Cdd:COG0003    15 GKTTVAAATALALAERGKRTLLVstDPA-HS--------------LGDVL--GTELGNEPTEVAVP-NLYALeidpeael 76

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2536340203 207 --TAGTMLPNPSKLFSSSRMQNIMEIA-----------------KTSFDLVVYDT 242
Cdd:COG0003    77 eeYWERVRAPLRGLLPSAGVDELAESLpgteelaaldellelleEGEYDVIVVDT 131
PHA02518 PHA02518
ParA-like protein; Provisional
 125-167 9.07e-04

ParA-like protein; Provisional


Pssm-ID: 222854 [Multi-domain]  Cd Length: 211  Bit Score: 39.83  E-value: 9.07e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2536340203 125 KSIAIASATTGDGKSTIAINLAQMAAEAGQKVLLVDANlhhPQ 167
Cdd:PHA02518    1 KIIAVLNQKGGAGKTTVATNLASWLHADGHKVLLVDLD---PQ 40
ArsA cd02035
Arsenical pump-driving ATPase ArsA; ArsA ATPase functions as an efflux pump located on the ...
 137-206 1.25e-03

Arsenical pump-driving ATPase ArsA; ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.


Pssm-ID: 349755 [Multi-domain]  Cd Length: 250  Bit Score: 39.41  E-value: 1.25e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2536340203 137 GKSTIAINLAQMAAEAGQKVLLV--DANlHHpqihekigltnnqgLSDVLigNLNLSHVITQSPTEqNLFVV 206
Cdd:cd02035    12 GKTTIAAATAVRLAEQGKRVLLVstDPA-HS--------------LSDAF--GQKLGGETPVKGAP-NLWAM 65
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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