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Conserved domains on  [gi|2539731352|ref|WP_295942521|]
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PP0621 family protein [uncultured Acidovorax sp.]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PP0621_fam NF041023
PP0621 family protein; Members of this family of small proteins have an N-terminal signal ...
 16-70 3.06e-14

PP0621 family protein; Members of this family of small proteins have an N-terminal signal peptide and three invariant Cys resisdues, two in a CXXC motif.


:

Pssm-ID: 468952  Cd Length: 70  Bit Score: 60.71  E-value: 3.06e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2539731352 16 IWRSRRAPEAAAPKAPPTPPALPQDMLACAHCGVHIPQAEALMLGSQAYCSAEHR 70
Cdd:NF041023  16 LFRKKRRPARARKKPKKPKAAEPEPMVRCAHCGVHLPRSEAILSGGKYYCSKEHL 70
 
Name Accession Description Interval E-value
PP0621_fam NF041023
PP0621 family protein; Members of this family of small proteins have an N-terminal signal ...
 16-70 3.06e-14

PP0621 family protein; Members of this family of small proteins have an N-terminal signal peptide and three invariant Cys resisdues, two in a CXXC motif.


Pssm-ID: 468952  Cd Length: 70  Bit Score: 60.71  E-value: 3.06e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2539731352 16 IWRSRRAPEAAAPKAPPTPPALPQDMLACAHCGVHIPQAEALMLGSQAYCSAEHR 70
Cdd:NF041023  16 LFRKKRRPARARKKPKKPKAAEPEPMVRCAHCGVHLPRSEAILSGGKYYCSKEHL 70
 
Name Accession Description Interval E-value
PP0621_fam NF041023
PP0621 family protein; Members of this family of small proteins have an N-terminal signal ...
 16-70 3.06e-14

PP0621 family protein; Members of this family of small proteins have an N-terminal signal peptide and three invariant Cys resisdues, two in a CXXC motif.


Pssm-ID: 468952  Cd Length: 70  Bit Score: 60.71  E-value: 3.06e-14
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 2539731352 16 IWRSRRAPEAAAPKAPPTPPALPQDMLACAHCGVHIPQAEALMLGSQAYCSAEHR 70
Cdd:NF041023  16 LFRKKRRPARARKKPKKPKAAEPEPMVRCAHCGVHLPRSEAILSGGKYYCSKEHL 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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