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Conserved domains on  [gi|2559317387|ref|WP_304673915|]
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anhydro-N-acetylmuramic acid kinase [Neisseria polysaccharea]

Protein Classification

anhydro-N-acetylmuramic acid kinase( domain architecture ID 10508667)

anhydro-N-acetylmuramic acid kinase catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
AnmK pfam03702
Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the ...
4-365 0e+00

Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilization of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling.


:

Pssm-ID: 397660  Cd Length: 364  Bit Score: 583.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   4 QLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFtPYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELLC 83
Cdd:pfam03702   1 MRYIGLMSGTSLDGVDAALVDLDDARVELLASHFS-PMPAGLRQQLLDLCQGGATTLQRLGELDHQLGLLFADAVNALLQ 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  84 SQNLAPSDITAVGCHGQTVRHAPEH--GYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRET 161
Cdd:pfam03702  80 KQNLSPEQIRAIGCHGQTVRHEPEGavPFTMQLGDANLIAERTGITVVADFRRRDVAAGGQGAPLVPAFHEALFAAPNET 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 162 RAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTG 241
Cdd:pfam03702 160 RAVLNIGGIANVSVLPPGAPVLGFDTGPGNMLMDAWIQKHRGEPYDKDGEWAASGKVNPALLAVLLADPYFALPAPKSTG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 242 RELFALNWLETYLGGGENR-YDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGTrVSLHSTAE 320
Cdd:pfam03702 240 RELFNLPWLETHLAKHPVAaADVQATLAELTAVTIVDALLQAQPDCERLLVCGGGARNPLLMARLAALLPG-VQVASTDA 318
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2559317387 321 LNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGAGYY 365
Cdd:pfam03702 319 YGLDPDYMEAMAFAWLAARTLNGLPGNLPSVTGASRARSLGAIYP 363
 
Name Accession Description Interval E-value
AnmK pfam03702
Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the ...
4-365 0e+00

Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilization of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling.


Pssm-ID: 397660  Cd Length: 364  Bit Score: 583.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   4 QLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFtPYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELLC 83
Cdd:pfam03702   1 MRYIGLMSGTSLDGVDAALVDLDDARVELLASHFS-PMPAGLRQQLLDLCQGGATTLQRLGELDHQLGLLFADAVNALLQ 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  84 SQNLAPSDITAVGCHGQTVRHAPEH--GYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRET 161
Cdd:pfam03702  80 KQNLSPEQIRAIGCHGQTVRHEPEGavPFTMQLGDANLIAERTGITVVADFRRRDVAAGGQGAPLVPAFHEALFAAPNET 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 162 RAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTG 241
Cdd:pfam03702 160 RAVLNIGGIANVSVLPPGAPVLGFDTGPGNMLMDAWIQKHRGEPYDKDGEWAASGKVNPALLAVLLADPYFALPAPKSTG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 242 RELFALNWLETYLGGGENR-YDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGTrVSLHSTAE 320
Cdd:pfam03702 240 RELFNLPWLETHLAKHPVAaADVQATLAELTAVTIVDALLQAQPDCERLLVCGGGARNPLLMARLAALLPG-VQVASTDA 318
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2559317387 321 LNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGAGYY 365
Cdd:pfam03702 319 YGLDPDYMEAMAFAWLAARTLNGLPGNLPSVTGASRARSLGAIYP 363
AnmK COG2377
1,6-Anhydro-N-acetylmuramate kinase [Cell wall/membrane/envelope biogenesis];
2-362 0e+00

1,6-Anhydro-N-acetylmuramate kinase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441944  Cd Length: 363  Bit Score: 522.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   2 ETQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAEL 81
Cdd:COG2377     1 KPMLVIGLMSGTSLDGIDAALVEFDGEGKVELLAAETVPYPEELRARLLALCAPASLSLEELAELDRALGRLFAEAVLAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  82 LCSQNLAPSDITAVGCHGQTVRHAPE--HGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDR 159
Cdd:COG2377    81 LAKAGLSAEDIDAIGSHGQTVRHRPEgrPGFTLQIGDGALLAELTGIPVVADFRSRDVAAGGQGAPLVPAFHQALFSDPG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 160 ETRAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKS 239
Cdd:COG2377   161 EPRAVLNIGGIANITYLPPGGPVIAFDTGPGNALLDAWVQRHGGKPYDKDGAWAASGKVDEALLARLLADPYFALPPPKS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 240 TGRELFALNWLETYLGG-GENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGtRVSLHST 318
Cdd:COG2377   241 TGRELFNLAWLEQLLAGfGLSPEDVQATLTELTAASIADAIRRLPPPPDRVLVCGGGAHNPTLMERLQALLP-GVPVVTT 319
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 2559317387 319 AELNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGA 362
Cdd:COG2377   320 DELGIDPDAKEALAFAWLAVRTLRGLPGNLPSVTGAKRPVILGA 363
anmK PRK09585
anhydro-N-acetylmuramic acid kinase; Reviewed
5-362 0e+00

anhydro-N-acetylmuramic acid kinase; Reviewed


Pssm-ID: 236579  Cd Length: 365  Bit Score: 517.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   5 LYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFT-PYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELLC 83
Cdd:PRK09585    3 RYIGLMSGTSLDGVDAALVEIDGEGTKVELLASATvPYPDELRAALLALLQGGADELERLAELDTALGRLFAEAVNALLA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  84 SQNLAPSDITAVGCHGQTVRHAPEHGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRA 163
Cdd:PRK09585   83 EAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQGAPLVPAFHQALFGHPDETRA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 164 VLNIGGIANISVLPSDA-PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTGR 242
Cdd:PRK09585  163 VLNIGGIANITLLPPGGgPVIGFDTGPGNALIDAWIQRHGGKPYDKDGAWAASGKVDEALLARLLAHPYFALPPPKSTGR 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 243 ELFALNWLETYL-GGGENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGTRVSlhSTAEL 321
Cdd:PRK09585  243 ELFNLAWLERQLaGFGLSPEDVQATLTELTAASIARAVRRLPPGPDELLVCGGGARNPTLMERLAALLPTEVA--TTDAL 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2559317387 322 NLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGA 362
Cdd:PRK09585  321 GIDGDAKEALAFAWLAVRTLRGLPGNLPSVTGASGPVVLGA 361
ASKHA_NBD_ANMK cd24050
nucleotide-binding domain (NBD) of anhydro-N-acetylmuramic acid kinase (ANMK) and similar ...
6-365 0e+00

nucleotide-binding domain (NBD) of anhydro-N-acetylmuramic acid kinase (ANMK) and similar proteins; ANMK (EC 2.7.1.170), also called AnhMurNAc kinase, catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.


Pssm-ID: 466900  Cd Length: 369  Bit Score: 511.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   6 YIGIMSGTSMDGADAVLIRMDG-GKWLGAEGHAFT--PYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELL 82
Cdd:cd24050     1 YIGLMSGTSLDGIDAALVEIDGdGTELRVKLLAFHsvPYPKDLREKLLELCQPGTDTLDELCRLNFELGELFAEAVLELL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  83 CSQNLAPSDITAVGCHGQTVRHAPE---HGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDR 159
Cdd:cd24050    81 AKSGISPSDIDAIGSHGQTVWHRPEperVGFTLQIGDPAVIAERTGITVVSDFRRADMAAGGQGAPLVPAFDYALFADPD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 160 ETRAVLNIGGIANISVLPSD-APAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPK 238
Cdd:cd24050   161 ETRAVLNIGGIANVTYLPPGsDDVIGFDTGPGNMLIDAWVQRLTGLPYDKDGEIAASGKVDEALLARLLDDPYFALPPPK 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 239 STGRELFALNWLETYLGGGEN--RYDVLRTLSRFTAQTVFDAVS-HAAANARQMYICGGGIRNPVLMADLAECFGtRVSL 315
Cdd:cd24050   241 STGRELFNLAWLEELLKRAPGlsPEDIVATLTAFTARSIADAYRkFVPPGPDEVIVCGGGAHNPTLMRRLRELLP-GIKV 319
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2559317387 316 HSTAELNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGAGYY 365
Cdd:cd24050   320 KTTDELGISSDAKEAMAFAWLAYRTLNGLPGNLPSVTGASKPVVLGKIYP 369
microcomp_PduM TIGR04493
microcompartment protein PduM; Members of this family are PduM, a protein essential for ...
64-154 7.12e-03

microcompartment protein PduM; Members of this family are PduM, a protein essential for forming functional microcompartments in which a trimeric B12-dependent enzyme acts as a dehydratase for 1,2-propanediol (Salmonella enterica) or glycerol (Lactobacillus reuteri).


Pssm-ID: 275286  Cd Length: 153  Bit Score: 36.83  E-value: 7.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  64 RMLSQELSRLY--AQTVAELLCSQnLAPSDITAVGCHGQTVRhapehgysVQLADLPLLaertriftvgdfrsRDLAAGG 141
Cdd:TIGR04493   2 RIVEEVVARLQqrAQSTATLSVAQ-LRDAPSRTIFLQNASLR--------LQQVDLPLL--------------RQLAEMD 58
                          90
                  ....*....|...
gi 2559317387 142 QGAPLVPAFHEAL 154
Cdd:TIGR04493  59 TSDPAVAWLHEAL 71
 
Name Accession Description Interval E-value
AnmK pfam03702
Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the ...
4-365 0e+00

Anhydro-N-acetylmuramic acid kinase; Anhydro-N-acetylmuramic acid kinase catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is also required for the utilization of anhMurNAc, either imported from the medium, or derived from its own cell wall murein, and in so doing plays a role in cell wall recycling.


Pssm-ID: 397660  Cd Length: 364  Bit Score: 583.58  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   4 QLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFtPYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELLC 83
Cdd:pfam03702   1 MRYIGLMSGTSLDGVDAALVDLDDARVELLASHFS-PMPAGLRQQLLDLCQGGATTLQRLGELDHQLGLLFADAVNALLQ 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  84 SQNLAPSDITAVGCHGQTVRHAPEH--GYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRET 161
Cdd:pfam03702  80 KQNLSPEQIRAIGCHGQTVRHEPEGavPFTMQLGDANLIAERTGITVVADFRRRDVAAGGQGAPLVPAFHEALFAAPNET 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 162 RAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTG 241
Cdd:pfam03702 160 RAVLNIGGIANVSVLPPGAPVLGFDTGPGNMLMDAWIQKHRGEPYDKDGEWAASGKVNPALLAVLLADPYFALPAPKSTG 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 242 RELFALNWLETYLGGGENR-YDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGTrVSLHSTAE 320
Cdd:pfam03702 240 RELFNLPWLETHLAKHPVAaADVQATLAELTAVTIVDALLQAQPDCERLLVCGGGARNPLLMARLAALLPG-VQVASTDA 318
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*
gi 2559317387 321 LNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGAGYY 365
Cdd:pfam03702 319 YGLDPDYMEAMAFAWLAARTLNGLPGNLPSVTGASRARSLGAIYP 363
AnmK COG2377
1,6-Anhydro-N-acetylmuramate kinase [Cell wall/membrane/envelope biogenesis];
2-362 0e+00

1,6-Anhydro-N-acetylmuramate kinase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 441944  Cd Length: 363  Bit Score: 522.32  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   2 ETQLYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAEL 81
Cdd:COG2377     1 KPMLVIGLMSGTSLDGIDAALVEFDGEGKVELLAAETVPYPEELRARLLALCAPASLSLEELAELDRALGRLFAEAVLAL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  82 LCSQNLAPSDITAVGCHGQTVRHAPE--HGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDR 159
Cdd:COG2377    81 LAKAGLSAEDIDAIGSHGQTVRHRPEgrPGFTLQIGDGALLAELTGIPVVADFRSRDVAAGGQGAPLVPAFHQALFSDPG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 160 ETRAVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKS 239
Cdd:COG2377   161 EPRAVLNIGGIANITYLPPGGPVIAFDTGPGNALLDAWVQRHGGKPYDKDGAWAASGKVDEALLARLLADPYFALPPPKS 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 240 TGRELFALNWLETYLGG-GENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGtRVSLHST 318
Cdd:COG2377   241 TGRELFNLAWLEQLLAGfGLSPEDVQATLTELTAASIADAIRRLPPPPDRVLVCGGGAHNPTLMERLQALLP-GVPVVTT 319
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 2559317387 319 AELNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGA 362
Cdd:COG2377   320 DELGIDPDAKEALAFAWLAVRTLRGLPGNLPSVTGAKRPVILGA 363
anmK PRK09585
anhydro-N-acetylmuramic acid kinase; Reviewed
5-362 0e+00

anhydro-N-acetylmuramic acid kinase; Reviewed


Pssm-ID: 236579  Cd Length: 365  Bit Score: 517.37  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   5 LYIGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFT-PYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELLC 83
Cdd:PRK09585    3 RYIGLMSGTSLDGVDAALVEIDGEGTKVELLASATvPYPDELRAALLALLQGGADELERLAELDTALGRLFAEAVNALLA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  84 SQNLAPSDITAVGCHGQTVRHAPEHGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRA 163
Cdd:PRK09585   83 EAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQGAPLVPAFHQALFGHPDETRA 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 164 VLNIGGIANISVLPSDA-PAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTGR 242
Cdd:PRK09585  163 VLNIGGIANITLLPPGGgPVIGFDTGPGNALIDAWIQRHGGKPYDKDGAWAASGKVDEALLARLLAHPYFALPPPKSTGR 242
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 243 ELFALNWLETYL-GGGENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECFGTRVSlhSTAEL 321
Cdd:PRK09585  243 ELFNLAWLERQLaGFGLSPEDVQATLTELTAASIARAVRRLPPGPDELLVCGGGARNPTLMERLAALLPTEVA--TTDAL 320
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 2559317387 322 NLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGA 362
Cdd:PRK09585  321 GIDGDAKEALAFAWLAVRTLRGLPGNLPSVTGASGPVVLGA 361
ASKHA_NBD_ANMK cd24050
nucleotide-binding domain (NBD) of anhydro-N-acetylmuramic acid kinase (ANMK) and similar ...
6-365 0e+00

nucleotide-binding domain (NBD) of anhydro-N-acetylmuramic acid kinase (ANMK) and similar proteins; ANMK (EC 2.7.1.170), also called AnhMurNAc kinase, catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling.


Pssm-ID: 466900  Cd Length: 369  Bit Score: 511.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   6 YIGIMSGTSMDGADAVLIRMDG-GKWLGAEGHAFT--PYPDDLRAALLALQNIGTDELHRSRMLSQELSRLYAQTVAELL 82
Cdd:cd24050     1 YIGLMSGTSLDGIDAALVEIDGdGTELRVKLLAFHsvPYPKDLREKLLELCQPGTDTLDELCRLNFELGELFAEAVLELL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  83 CSQNLAPSDITAVGCHGQTVRHAPE---HGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDR 159
Cdd:cd24050    81 AKSGISPSDIDAIGSHGQTVWHRPEperVGFTLQIGDPAVIAERTGITVVSDFRRADMAAGGQGAPLVPAFDYALFADPD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 160 ETRAVLNIGGIANISVLPSD-APAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPK 238
Cdd:cd24050   161 ETRAVLNIGGIANVTYLPPGsDDVIGFDTGPGNMLIDAWVQRLTGLPYDKDGEIAASGKVDEALLARLLDDPYFALPPPK 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 239 STGRELFALNWLETYLGGGEN--RYDVLRTLSRFTAQTVFDAVS-HAAANARQMYICGGGIRNPVLMADLAECFGtRVSL 315
Cdd:cd24050   241 STGRELFNLAWLEELLKRAPGlsPEDIVATLTAFTARSIADAYRkFVPPGPDEVIVCGGGAHNPTLMRRLRELLP-GIKV 319
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2559317387 316 HSTAELNLDPQWVEAVAFAWLAACWINRIPGSPHKATGASKPCILGAGYY 365
Cdd:cd24050   320 KTTDELGISSDAKEAMAFAWLAYRTLNGLPGNLPSVTGASKPVVLGKIYP 369
ASKHA_NBD_LGK cd24051
nucleotide-binding domain (NBD) of levoglucosan kinase (LGK) and similar proteins; LGK (EC 2.7. ...
7-361 5.69e-59

nucleotide-binding domain (NBD) of levoglucosan kinase (LGK) and similar proteins; LGK (EC 2.7.1.232) catalyzes the transfer of a phosphate group from ATP to levoglucosan (1,6-anhydro-beta-D-glucopyranose, LG) to yield glucose 6-phosphate in the presence of magnesium ion and ATP. In addition to the canonical kinase phosphotransfer reaction, the conversion requires cleavage of the 1,6-anhydro ring to allow ATP-dependent phosphorylation of the sugar O-6 atom.


Pssm-ID: 466901  Cd Length: 409  Bit Score: 196.23  E-value: 5.69e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   7 IGIMSGTSMDGADAVLIRMDGgkwLGAEG--------HAFTPYPDDLRAALLALQNIGTDELhrsRMLSQ---ELSRLYA 75
Cdd:cd24051     4 LGLNSGTSMDGIDCALCHFTQ---KTPDApmefelieYGEVPLAQPIKQRVMSMILEDTTSP---SELSEvnvILGETFA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  76 QTVAELLCSQNLAPSDITAVGCHGQTVRHA--PEHGY---SVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAF 150
Cdd:cd24051    78 DAVRQFAAERNVDLSDIDAIASHGQTIWLLsmPEEGQvksALTMGEGAIIAARTGITSVTDFRISDQAAGRQGAPLIAFF 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 151 HEALFRDDRETRAVLNIGGIANISVLPSDA-----PAFGFDTGPGNMLMDAWTQaHWQLP---YDKNGAKAAQGNILPQL 222
Cdd:cd24051   158 DALLLHHPTKLRACQNIGGIANVCFIPPDNdgrtdEYYDFDTGPGNVFIDAVVR-HFTNGeqeYDKDGAMGKRGKVDQEL 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 223 LDRLLAHPYFAQPHPKSTGRELFALNWLETYLGGGENR----YDVLRTLSRFTAQTVFDAVSHAA--ANARQMYICGGGI 296
Cdd:cd24051   237 VDDFLKMPYFQLDPPKTTGREVFRDTLAHDLIRRAEAKglspDDIVATTTRITAQSIVDHYRRYApsQEIDEIFMCGGGA 316
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2559317387 297 RNPVLMADLAECF-GTRVSLHSTAELNLDPQwvEAVAFAWLA-ACWINRiPGSPHKATGASKPCILG 361
Cdd:cd24051   317 FNPNIVEFIQQSYpGTKIMMLDEAGVPAGAK--EAITFAWQGmEALVGR-SIPVPTRVETRQHTVLG 380
ASKHA_NBD_ANMK-like cd24005
nucleotide-binding domain (NBD) of the anhydro-N-acetylmuramic acid kinase (ANMK)-like domain ...
7-335 5.54e-49

nucleotide-binding domain (NBD) of the anhydro-N-acetylmuramic acid kinase (ANMK)-like domain family; The family includes anhydro-N-acetylmuramic acid kinase (ANMK) and levoglucosan kinase (LGK). ANMK (EC 2.7.1.170), also called AnhMurNAc kinase, catalyzes the specific phosphorylation of 1,6-anhydro-N-acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. It is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling. LGK (EC 2.7.1.232) catalyzes the transfer of a phosphate group from ATP to levoglucosan (1,6-anhydro-beta-D-glucopyranose, LG) to yield glucose 6-phosphate in the presence of magnesium ion and ATP. In addition to the canonical kinase phosphotransfer reaction, the conversion requires cleavage of the 1,6-anhydro ring to allow ATP-dependent phosphorylation of the sugar O-6 atom. The ANMK-like family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily of phosphotransferases, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466855  Cd Length: 358  Bit Score: 168.74  E-value: 5.54e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387   7 IGIMSGTSMDGADAVLIRMDGGKWLGAEGHAFTPYPDDLRAALLALQNIGT-DELHRSRMLsqeLSRLYAQTVAELLCSQ 85
Cdd:cd24005     2 LGLMSGTSLDGMDIVLIEQGDRTTLLASHYLPMPAGLREDILALCVPGPDEiARAAEVEQR---WVALAAQGVRELLLQQ 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  86 NLAPSDITAVGCHGQTVRHAPEHGYSVQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRETRAVL 165
Cdd:cd24005    79 QMSPDEVRAIGSHGQTIRHEPARHFTVQIGNPALLAELTGIDVVADFRRRDVAAGGQGAPLVPAFHQALFGDDDTSRAVL 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 166 NIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLAHPYFAQPHPKSTGRELF 245
Cdd:cd24005   159 NIGGFSNVSLLSPGKPVRGFDCGPGNVLMDAWIHHQRGEHFDRDGAWAASGQVNHALLASLLADEFFAARGPKSTGRERF 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 246 ALNWLETYL--GGGENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRNPVLMADLAECF-GTRVSLHSTAELN 322
Cdd:cd24005   239 NLPWLQEHLarHPALPAADIQATLLELSARSISESLLDAQPDCEEVLVCGGGAFNTALMKRLAMLMpEARVASTDEYGIP 318
                         330
                  ....*....|...
gi 2559317387 323 LDPQwvEAVAFAW 335
Cdd:cd24005   319 PAWM--EGMAFAW 329
ASKHA_NBD_FGGY_BaEryA-like cd24121
nucleotide-binding domain (NBD) of Brucella abortus erythritol kinase (BaEryA) and similar ...
224-321 5.48e-04

nucleotide-binding domain (NBD) of Brucella abortus erythritol kinase (BaEryA) and similar proteins; The subfamily contains a group of uncharacterized proteins with similarity to Brucella abortus erythritol kinase (BaEryA; EC 2.7.1.215). It catalyzes the phosphorylation of erythritol to D-erythritol-1-phosphate. Members of this subfamily belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.


Pssm-ID: 466971 [Multi-domain]  Cd Length: 452  Bit Score: 41.84  E-value: 5.48e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 224 DRLLAHPYFAQ-----PHPKSTGRELFalnwleTYLGGGENRYDVLRTLSRFTAQTVFDAVSHAAANARQMYICGGGIRN 298
Cdd:cd24121   342 EGVLYHPYLSPageraPFVNPNARAQF------TGLSLEHTRADLLRAVYEGVALAMRDCYEHMGEDPGELRLSGGGARS 415
                          90       100
                  ....*....|....*....|...
gi 2559317387 299 PVLMADLAECFGTRVSLHSTAEL 321
Cdd:cd24121   416 DTWCQILADALGVPVRVPAGEEF 438
ASKHA_NBD_Mk0840-like cd24014
nucleotide-binding domain (NBD) of Methanopyrus kandleri sugar kinase Mk0840 and similar ...
165-321 2.05e-03

nucleotide-binding domain (NBD) of Methanopyrus kandleri sugar kinase Mk0840 and similar proteins; The family includes uncharacterized Methanopyrus kandleri sugar kinase Mk0840 that shows high similarity to bacterial anhydro-N-acetylmuramic acid kinase, which is involved in murein recycling. This family belongs to the ASKHA (Acetate and Sugar Kinases/Hsc70/Actin) superfamily of phosphotransferases, all members of which share a common characteristic five-stranded beta sheet occurring in both the N- and C-terminal domains.


Pssm-ID: 466864  Cd Length: 313  Bit Score: 39.65  E-value: 2.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 165 LNIGGIANISVLPSDAPAFGFDT-GPGNMLMDAWTQAHWQLPYDKNGAKAAQGNILPQLLDRLLA-----HPYFAQ---- 234
Cdd:cd24014   128 VDVGAMAVVTPIRDGRPDFGDAVvSVGTFPLDLAARELLGKEYDEGGKKAAEGEVDENFRRELRSvdvdgKPVFGRvrgs 207
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387 235 --PHPKSTGRELfalnwLETYLGGGENRYDVLRTLSRFTAQTVfdAVSHAAANARQMYICGGGIRNPVLMADLAECFGTR 312
Cdd:cd24014   208 laPVPPEQERVL-----RDHIRDAGAPAEDVLRTLVELVAETI--VINAAQYDMDLLVLSGGGVKNELLKRRVSELWEGD 280

                  ....*....
gi 2559317387 313 VSLHSTAEL 321
Cdd:cd24014   281 VSIFAGEEL 289
microcomp_PduM TIGR04493
microcompartment protein PduM; Members of this family are PduM, a protein essential for ...
64-154 7.12e-03

microcompartment protein PduM; Members of this family are PduM, a protein essential for forming functional microcompartments in which a trimeric B12-dependent enzyme acts as a dehydratase for 1,2-propanediol (Salmonella enterica) or glycerol (Lactobacillus reuteri).


Pssm-ID: 275286  Cd Length: 153  Bit Score: 36.83  E-value: 7.12e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2559317387  64 RMLSQELSRLY--AQTVAELLCSQnLAPSDITAVGCHGQTVRhapehgysVQLADLPLLaertriftvgdfrsRDLAAGG 141
Cdd:TIGR04493   2 RIVEEVVARLQqrAQSTATLSVAQ-LRDAPSRTIFLQNASLR--------LQQVDLPLL--------------RQLAEMD 58
                          90
                  ....*....|...
gi 2559317387 142 QGAPLVPAFHEAL 154
Cdd:TIGR04493  59 TSDPAVAWLHEAL 71
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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