|
Name |
Accession |
Description |
Interval |
E-value |
| MATE_Wzx_like |
cd13128 |
Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; ... |
13-412 |
4.36e-65 |
|
Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240533 [Multi-domain] Cd Length: 402 Bit Score: 213.94 E-value: 4.36e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 13 AIIMLMERFFRLGAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNNLVQKMASsQTDPLRARTILQSALWLR 92
Cdd:cd13128 5 SGWLFVGNIISKLLGFLVRVYLARYLGPEGFGILSLALAFVGLFSIFADLGLPTALVREIA-RYRKEKIREIISTSLVLK 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 93 LIAGLFFAVLMIL--GFAVFYPHYFAIGPAAISALFILQSFSAMMLCEYDQNYRghFRAVALSKVVVSILTLTARVVALI 170
Cdd:cd13128 84 LILGILALLLLFLfaFLIAFYDPELVLLLYILALSLPFSALNSLFRGIFQGFEK--MKYIVIARIIESVLSLILALILVL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 171 FGANVDTLLLVVGIEFLLTGALQYYWHRRYAPQEPGLSlkyFSWQSSKELLKRSSWLWLSGVVSVIYLKIDTIMIEQMIG 250
Cdd:cd13128 162 LGGGLIGFALAYLIASVLSAILLLYIYRKKILLPKFFS---FDLKLAKELLRFSIPLALSGIFSLIYTRIDTIMLGYFLG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 251 IAATGQYTAVARLSELWYVIPVTLAARYYPDLLKAYNKNWESYLCILKKRSVQFFLMAFGIAIFMTLGAKWIMWLAYGEK 330
Cdd:cd13128 239 DAAVGIYNAAYRIAELLLFIPSAISTALFPRISELYKNDKDELKKLLKKSFKYLFLISLPIAIGLFLFAEPIITLLFGEE 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 331 FVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISYAYASFFFL 410
Cdd:cd13128 319 YLPAALVLQILAWGFLFIFLNGIFGSILQAIGKQKLTLKILLIGALLNVILNLLLIPKYGIIGAAIATLISEFIIFILLL 398
|
..
gi 2568117599 411 FC 412
Cdd:cd13128 399 YL 400
|
|
| RfbX |
COG2244 |
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane ... |
13-410 |
1.96e-38 |
|
Membrane protein involved in the export of O-antigen and teichoic acid [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 441845 [Multi-domain] Cd Length: 366 Bit Score: 142.78 E-value: 1.96e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 13 AIIMLMERFFRLGAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNNLVQKMASSQTDpLRARTILQSALWLR 92
Cdd:COG2244 8 TLWLLLGQLLGALLGFLLLPLLARLLGPEEYGLFALALSIVALLSVLADLGLSTALVRFIAEYRE-EELRRLLSTALLLR 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 93 LIAGLFFAVLMILGFAVF--YPHYFAIGPAAISALFILQSFSAMMLCEYDQNYRGHFRAVALSKVVVSILTLTARVVALI 170
Cdd:COG2244 87 LLLSLLLALLLLLLAPFIaaLLGEPELALLLLLLALALLLSALSAVLLALLRGLERFKLLALINILSSLLSLLLALLLAL 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 171 FGANVDTLLLvvgieflltgalqyywhrryapqepglslkyfswqsskellKRSSWLWLSGVVSVIYLKIDTIMIEQMIG 250
Cdd:COG2244 167 LGLGLWGLVL-----------------------------------------KYSLPLLLSGLLGLLLTNLDRLLLGALLG 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 251 IAATGQYTAVARLSELWYVIPVTLAARYYPDLLKAY-NKNWESYLCILKKRSVQFFLMAFGIAIFMTLGAKWIMWLAYGE 329
Cdd:COG2244 206 PAAVGIYSAAYRLASLLLLLITALSQVLFPRLSRLLaEGDREELRRLYRKALRLLLLLGLPLALGLALLAPPLLSLLFGP 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 330 KFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISYAYASFFF 409
Cdd:COG2244 286 EYAEAAPVLPILALGALFLALSGVLSNLLLALGRTRLLLIISLIGAVLNLVLNLLLIPRYGLVGAAIATLLSYLVLLLLL 365
|
.
gi 2568117599 410 L 410
Cdd:COG2244 366 L 366
|
|
| MATE_tuaB_like |
cd13127 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This ... |
13-425 |
2.66e-23 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This family might function as a translocase for lipopolysaccharides and participate in the biosynthesis of cell wall components such as teichuronic acid. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240532 [Multi-domain] Cd Length: 406 Bit Score: 101.02 E-value: 2.66e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 13 AIIMLMERFFRLGAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNN-LVQKMASSQTDplrartiLQSALWL 91
Cdd:cd13127 5 AFWSAISQVVVQLLQFVVTIILARLLTPEDFGLVAMATVFIAFAQLFSDLGLSSaLIQRKDLTEED-------LSTVFWL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 92 RLIAGLFFAVLMILG---FAVFY--PHYFAIGPAaISALFILQSFSA--MMLCEYDQNyrghFRAVALSKVVVSILTLTA 164
Cdd:cd13127 78 NLLLGLLLYLLLFLLaplIAAFYnePELIPLLRV-LSLSFLLSGLGSvpRALLQRELR----FKKLAIIELISTLVSGVV 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 165 RVVALIFGANVDTLLLVVGIEFLLTGALQYYWHRRYapqePGLSlkyFSWQSSKELLKRSSWLWLSGVVSVIYLKIDTIM 244
Cdd:cd13127 153 AIVLALLGFGVWALVAQQLVGALVSTVLLWILSRWR----PRLS---FSLASLKELLSFGSKLLGSNLLNYFSRNLDNLI 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 245 IEQMIGIAATGQYTAVARLSEL------WYVIPVTLAA----RYYPDLLKAYnknwesYLCILKKRSVQFFLMAFGIAIF 314
Cdd:cd13127 226 IGKFLGAAALGYYSRAYRLALLpvqnitGPITRVLFPAlsrlQDDPERLRRA------YLKALRLLALITFPLMVGLALL 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 315 mtlgAKWIMWLAYGEKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLnLWLIPIYGIEGA 394
Cdd:cd13127 300 ----AEPLVLLLLGEKWLPAVPILQILALAGLFQPLSSLNGSLLLALGRTDLLLKLGLIKAVLTVLA-LLIGIPYGIIGV 374
|
410 420 430
....*....|....*....|....*....|..
gi 2568117599 395 AWATLISYAYASFFFLFCSGK-TRAHFWQLLK 425
Cdd:cd13127 375 AIAYVIASLLSFPLNLYLAGRlIGISLLELLR 406
|
|
| MATE_like_10 |
cd13125 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This ... |
21-411 |
2.44e-16 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; This family might function as a translocase for lipopolysaccharides, such as O-antigen. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240530 [Multi-domain] Cd Length: 409 Bit Score: 80.28 E-value: 2.44e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 21 FFRLGAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNN-LVQKMASSQTDPLRARTILQSALWLRLIAGLFF 99
Cdd:cd13125 11 LIKILAGLIINKVVAVYLGPSGVALLGQLQNFVTILQTIAGGGINNgVVKYTAEYKDDEEKLARVWSTAFRITLILSILG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 100 AVLMILgFAVFYPHYFAIGP------AAISALFILQSFSAMMLCEYdqNYRGHFRAVALSKVVVSILTLTArVVALIFGA 173
Cdd:cd13125 91 GLLLLL-FSKPLSSLLFGDIdyswvfILLGLALPLFALNNLLLAIL--NGLKEIKRYALINIISSLIGLLV-SVLLVYFY 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 174 NVDTLLLVVGIEFLLTGALQYYwhrrYAPQEPGLSLKYFSWQSSKELLKRSSWLWLSGVVSVIYLKIDTIMIEQMI---- 249
Cdd:cd13125 167 GLKGALLALVLNQSLIFLVTLI----YSRKQPWFKLKYLWGRLDKDIIKKLLKFSLMALVSALSLPLSQIIVRNILirql 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 250 GIAATGQYTAVARLSELW-YVIPVTLAARYYPDLLKAYNKnwESYLCILKKRSVQFFLMAFGIAIFMTLGAKWIMWLAYG 328
Cdd:cd13125 243 GWEAAGYWQAVWKISDVYlGFITTALSTYYLPRLSAIKDN--KELKREVNKQLKVILPLVAIGALLIYLLRDLIIQILFS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 329 EKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISYAYASFF 408
Cdd:cd13125 321 EEFLPARELFLWQLIGDFFKIASWLLGYILLAKGMTKLFIITEILFALLFVLLSLLFIPLFGLEGAGIAYAINYILYLIL 400
|
...
gi 2568117599 409 FLF 411
Cdd:cd13125 401 MYF 403
|
|
| SpoVB |
COG5841 |
Stage V sporulation protein SpoVB/SpoIIIF, required for spore cortex synthesis [Cell cycle ... |
27-412 |
1.40e-15 |
|
Stage V sporulation protein SpoVB/SpoIIIF, required for spore cortex synthesis [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444543 [Multi-domain] Cd Length: 532 Bit Score: 78.66 E-value: 1.40e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 27 GAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNNLVQKM---ASSQTDPLRARTILQSALWLRLIAGLFFAVLM 103
Cdd:COG5841 24 GAIYRIPLQNIIGDEGFGLYQMAYPIYGLFLTLATAGIPVAISKLvaeYNALGDYKGARRIFRVSLLLLLILGLVFFLLL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 104 ILGfAVFYPHYFAIGPAAISAL------FILQSFSAMmlceydqnYRGHF------RAVALSKVVVSIltltARVVALIF 171
Cdd:COG5841 104 FFG-APFIARLLLGDPRAYYSLralapaLLIVPVMSV--------LRGYFqglqnmTPTAVSQVIEQI----VRVIFILL 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 172 GANvdtLLLVVGIEFLLTGA---------------LQYYWHRRYAPQEPGLSLKYFSWQSSKELLKRsswLW-------L 229
Cdd:COG5841 171 LAY---LLLPYGLEYAAAGAtfgavigalagllvlLYYYRKRKKKLKRLLEKSKTKSKESSKDILKE---LLriaipitL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 230 SGVVSVIYLKIDTIMIEQM---IGIAAT------GQYTAVA-RLSELWYVIPVTLAARYYPDLLKAY-NKNWESylciLK 298
Cdd:COG5841 245 SSLVLPLFQLIDSFTVPRRlqaAGLSASeatslyGILSGMAqPLVNLPTVLATALATSLVPAISEAFaKKDRKL----VR 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 299 KRSVQFFLMAFGIAIFMTLG----AKWIMWLAYGEKFVpsATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVG 374
Cdd:COG5841 321 RRINQALRLTLLIGLPAAVGlavlAEPINTLLFGNPEG--GGILAILAPSAIFLSLQQVTTGILQGLGKQKIPVINLLIG 398
|
410 420 430
....*....|....*....|....*....|....*...
gi 2568117599 375 AILNVLLNLWLIPIYGIEGAAWATLISYAYASFFFLFC 412
Cdd:COG5841 399 LLVKIILNYLLVPLFGIYGAALATVIGYLVAAILNLAA 436
|
|
| MATE_SpoVB_like |
cd13124 |
Stage V sporulation protein B, also known as Stage III sporulation protein F, and related ... |
27-416 |
6.77e-15 |
|
Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins; The integral membrane protein SpoVB has been implicated in the biosynthesis of the peptidoglycan component of the spore cortex in Bacillus subtilis. This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240529 [Multi-domain] Cd Length: 434 Bit Score: 76.35 E-value: 6.77e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 27 GAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNNLVQKM---ASSQTDPLRARTILQSALWLRLIAGLFFAVLM 103
Cdd:cd13124 14 GAIYRIPLQNIIGDEGMGLYQMAYPIYGIFLTLATAGIPVAISKLvaeYNALGDYKGARRIFRVSLILLLILGLVFFLLL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 104 ILGfAVFYPHYFAIGPAAISAL------FILQSFSAMmlceydqnYRGHF------RAVALSKV------VVSILTLTAR 165
Cdd:cd13124 94 FFG-APFLAQLLLGDPRLAPVIralapaILIVPLLSV--------LRGYFqglqnmTPTAVSQVieqivrVIVILVLAYL 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 166 VVA----LIFGANVDTLLLVVGiEFLLTGALQYYWHRRYAPQEPGLSLKYFSWQSSKELLKRsswLW-------LSGVVS 234
Cdd:cd13124 165 LLPvgggLYYAAAGATFGAVIG-ALAGLLVLLYYYRKKRRELKRLLRKSPRSKISTKEILKE---LLsyaipitLSSLIL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 235 VIYLKIDTIMIEQMIGIA------AT---GQYTAVAR-LSELWYVIPVTLAARYYPDLLKAY-NKNWESylciLKKRSVQ 303
Cdd:cd13124 241 PLLQLIDSFTVPRRLQAAglseseATalyGILTGRAQpLVQLPTVIATALSTSLVPAISEAYaKGDKKE----LRRRINQ 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 304 FFLMAFGIAIFMTLG----AKWIMWLAYGEKfvPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNV 379
Cdd:cd13124 317 ALRLTLLIGLPAAVGlavlAEPINTLLFGDS--EGGLILQILAPSILFLSLQQVTAAILQGLGKVKIPVINLLIGLLVKI 394
|
410 420 430
....*....|....*....|....*....|....*..
gi 2568117599 380 LLNLWLIPIYGIEGAAWATLISYAYASFFFLFCSGKT 416
Cdd:cd13124 395 VLNYVLIPIFGIYGAAIATVIGFLVAALLNLRALKKL 431
|
|
| MATE_like |
cd12082 |
Multidrug and toxic compound extrusion family and similar proteins; The integral membrane ... |
13-410 |
4.51e-12 |
|
Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. MATE has also been identified as a large multigene family in plants, where the proteins are linked to disease resistance. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240527 [Multi-domain] Cd Length: 420 Bit Score: 67.35 E-value: 4.51e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 13 AIIMLMERFFRLGAGAVVTFMVARMLGD--EALGVYGVVMVWAAFLTPLSSMGLNNLVQKmASSQTDPLRARTILQSALW 90
Cdd:cd12082 1 AAPLLLSMLLQTLYNLVDTFFLGRLLGDalAAVGLAFPLIALLIALGVGLSVGTSALISQ-AIGAGDEEKARRVLVQSIV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 91 LRLIAGLFFAVLMILG---FAVFYPHYFAIGPAAISALFILqSFSAMMLCEYDQNY-----RGHFRAVALSKVVvSILTL 162
Cdd:cd12082 80 LAILLGLLLAALLLFFsplILSLLGAEEEVIELAATYLTIL-ILGLPITFLGAVLSgilqgEGDTRTAMIISVL-SNLLN 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 163 TARVVALIFGANVDTL------LLVVGIEFLLTGALQYYWHRRYAPQEPGLSLKYFSWQSSKELLKRSSWLWLSGVVSVI 236
Cdd:cd12082 158 ILLDPLLIFGLGPPELgiagaaLATVISYVIGALLLLIYLRKGKKILKFKLSLLKPDLELLRRLLRIGLPSAIQNSLLSL 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 237 YLKIDTIMIEQMIGIAATGQYTAVARLSELWYVIPVTLAARYYPDLLKAY-NKNWESYLCILKKRSVQFFLMAFGIAIFM 315
Cdd:cd12082 238 GLLIIVAIVAAFGGAAALAAYTVAFRIASLAFMPALGLAQAALPVVGQNLgAGNFDRARRITWVALLIGLLIGAVLGLLI 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 316 TLGAKWIMWL-AYGEKFVPSAT-VLQIHVWAGCFIFVRALISQHLIITGNEPLSL-LSHGVGAILNVLLNLWLIPI-YGI 391
Cdd:cd12082 318 LLFPEPILSLfTNDPEFLELAVsYLRILAIYYLFVGIGYVLQAGFQAAGRTLKSLiVSLLSYWVVRLPLAYVLAYLgLGL 397
|
410
....*....|....*....
gi 2568117599 392 EGAAWATLISYAYASFFFL 410
Cdd:cd12082 398 YGIWLALVISLILAALVLL 416
|
|
| Polysacc_synt |
pfam01943 |
Polysaccharide biosynthesis protein; Members of this family are integral membrane proteins. ... |
25-263 |
3.59e-09 |
|
Polysaccharide biosynthesis protein; Members of this family are integral membrane proteins. Many members of the family are implicated in production of polysaccharide. The family includes RfbX part of the O antigen biosynthesis operon. The family includes SpoVB from Bacillus subtilis, which is involved in spore cortex biosynthesis.
Pssm-ID: 426523 [Multi-domain] Cd Length: 274 Bit Score: 57.31 E-value: 3.59e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 25 GAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNN-LVQKMASSQTDPLRARTILQSALWLRLIAGLFFAVLM 103
Cdd:pfam01943 17 LLAFVTLPYLARILGPEGFGLYAFALAFVGLLTIFTDFGFNAaLVREIAKYREKYELVSLYWLNALLVKLVLVLLFLLLP 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 104 iLGFAVFYPHYFAIGPAAISALFILQSFSAMMLCEYDQnyRGHFRAVALSKVVVSILTLTARVVALIFGAN-VDTLLLVV 182
Cdd:pfam01943 97 -LIAAFLGLPELAVLYRILALMFLLLPGVVQFRRGLFQ--GLERMKYALISQIVESLSRVILVFIAVFLPGdIVAALLYQ 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 183 GIEFLLTG-ALQYYWHRRYAPQEPGLSLKYFswqssKELLKRSSWLWLSGVVSVIYLKIDTIMIEQMIGIAATGQYTAVA 261
Cdd:pfam01943 174 VLAALVGGiIALAVLRKIFRPRFVFPSLKLV-----RKLLSFGAPLFISSLAISLYTYIDSILLGLLLGAGAVGIYNAAY 248
|
..
gi 2568117599 262 RL 263
Cdd:pfam01943 249 QL 250
|
|
| Polysacc_synt_3 |
pfam13440 |
Polysaccharide biosynthesis protein; |
34-335 |
9.42e-08 |
|
Polysaccharide biosynthesis protein;
Pssm-ID: 404342 [Multi-domain] Cd Length: 293 Bit Score: 53.37 E-value: 9.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 34 VARMLGDEALGVYGVVMVWAAFLTPLSSMGLN-NLVQKMASSQTDplrartiLQSALWLRLIAGLFFAVLMILG---FAV 109
Cdd:pfam13440 2 LARLLSPEDFGVVAIATVVISFANIFVDMGFSsALIQKKDITETD-------YSTVFTFNLIFGALIYLILFALaplIAS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 110 FYPHYFAIGPAAISAL-FILQSFSAMMLCEYDQNYRghFRAVALSKVVVSILTLTARVVALIFGANVDTLLlvvgIEFLL 188
Cdd:pfam13440 75 FYNQPELVPVLRVLALvLILNGLSSVQTALLRRDLR--FKKLFKITLTSSVIGGIVGIVLAYLGFGVWALV----IGTLA 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 189 TGALQ---YYWhrrYAPQEPGLslkYFSWQSSKELLKRSSWLWLSGVVSVIYLKIDTIMIEQMIGIAATGQYTAVARLSE 265
Cdd:pfam13440 149 QQLLSlvlLWL---ASDWRPRL---TFSLKVIKELFSFGSWLLLSNLLNYLARNLDNLIIGKVLGTAALGLYSVAYRLAL 222
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2568117599 266 LWY-VIPVTLAARYYPDLLKAYN---KNWESYLCILkkRSVQFFLMAFGIAIFMTlgAKWIMWLAYGEKFVPSA 335
Cdd:pfam13440 223 LPTaNITSVITKVLFPALSRIQDdkaKLRELYLRVL--RLIAFIVFPIMAGLAVV--AEPLVLVLLGSQWLESV 292
|
|
| Polysacc_synt_C |
pfam14667 |
Polysaccharide biosynthesis C-terminal domain; This family represents the C-terminal integral ... |
337-416 |
1.30e-07 |
|
Polysaccharide biosynthesis C-terminal domain; This family represents the C-terminal integral membrane region of polysaccharide biosynthesis proteins.
Pssm-ID: 434111 [Multi-domain] Cd Length: 141 Bit Score: 50.65 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 337 VLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISYAYASFFFLFCSGKT 416
Cdd:pfam14667 1 VLQILALSIIFLSLSTVLTSILQGLGRTKLALIALLIGALVKLILNLLLIPLFGIVGAAIATVISLLVVALLNLYYLRRY 80
|
|
| MATE_epsE_like |
cd13129 |
Multidrug and toxic compound extrusion family and similar proteins; This model represents a ... |
17-411 |
2.02e-05 |
|
Multidrug and toxic compound extrusion family and similar proteins; This model represents a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins, including Ralstonia solanaceraum GMI1000 epsE, which may be involved in exporting exopolysaccharide EPS I, a virulence factor. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240534 [Multi-domain] Cd Length: 411 Bit Score: 46.71 E-value: 2.02e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 17 LMERFFRLGAGAVVTFMVARMLGDEALGVYGVVMVWAAFLTPLSSMGLNNLVQKMAS--SQTDPLRARTIL-QSALWLRL 93
Cdd:cd13129 10 LGGLVASRGAVFLTNIMVARSLGKHVFGEFGVIQVTIGLLGTFAGFGLGLAATKVIAetKDVDPERAGRIIgLSILLAVV 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 94 IAGLFFAVLMIlgfavfYPHYFAIGPAAISALFILQSFSAMML--CEYDQNYRG------HFRAVALSKVVVSILTLTAR 165
Cdd:cd13129 90 TGALAATVLFL------SATWIAIATLNAPHLAELLRIAAIILilTAFTGAQTGflsgfeAFRAIARVNIWAGLLLLPLM 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 166 VV-ALIFGANVDTLLLvvgIEFLLTGALQYYWHRRYAPQEPGLSLKY-FSWQSSKELLKRSSWLWLSGV-VSVIYLKIDT 242
Cdd:cd13129 164 WIgVYIRGLVGAVVIL---LASAAGNVASNSLILRRECQNQRGPVRTgLTWQELRVLFKFSLPSVLSGSmGSPVHWIALA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 243 IMIEQMIGIAATGQYTAVARLSELWYVIPVTLAARYYPDLLKAYNKNWESYLCILKKRSVQFFLMAFGIAIFMTLGAKWI 322
Cdd:cd13129 241 ILVNQPNGYAELGLFNAANQWRQFITFLPATLGNVALPFLAENFGNNEGMFRQTFRSALLFGLGLSLPLGCVFILASQIF 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 323 MWLaYGEKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISY 402
Cdd:cd13129 321 AWL-YGKEYGSAAASMRSLAVAAILVGLSVLLGQIIASSGKIWRGFALNMVWSVIYVAAAYLLLRLYGAPGLALAMSAAY 399
|
....*....
gi 2568117599 403 AYASFFFLF 411
Cdd:cd13129 400 CVLIIFQTL 408
|
|
| NorM |
COG0534 |
Na+-driven multidrug efflux pump, DinF/NorM/MATE family [Defense mechanisms]; |
305-420 |
3.11e-05 |
|
Na+-driven multidrug efflux pump, DinF/NorM/MATE family [Defense mechanisms];
Pssm-ID: 440300 [Multi-domain] Cd Length: 427 Bit Score: 45.91 E-value: 3.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 305 FLMAFGIAIFMTLGAKWIMWL--AYGEKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLN 382
Cdd:COG0534 95 LLLGLLLTLLGLLFAPPLLRLlgADPEVLALARDYLRIILLGLPFLLLFNVLNGILRGLGDTKTPMIIMLIGNVLNIVLD 174
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2568117599 383 LWLI--PIYGIEGAAWATLISYAYASFFFLFCSGKTRAHF 420
Cdd:COG0534 175 PLLIfgGGLGVAGAALATVISQAVSALLLLYYLFRKRSLL 214
|
|
| MATE_MurJ_like |
cd13123 |
MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; ... |
142-411 |
1.19e-04 |
|
MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240528 [Multi-domain] Cd Length: 420 Bit Score: 43.98 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 142 NYRGHFRAVALSKVVVSILTLtarVVALIFGANVDTLLLVVGIEFLLTGALQYYWHRRYAPQEPGLSLKYFSWQSS--KE 219
Cdd:cd13123 140 NAHGRFFAPALAPVLLNLVII---AGLLLLAPLFDLGIYALAWGVLLGGVLQLLVQLPALRRLGFRFRPRLDFRDPgvRR 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 220 LLKRSSWLWLSGVVSVIYLKIDTIMIEQMIGIAATGQYTAVaRLSELWY-VIPVTLAARYYPDLLKAY-NKNWESYLCIL 297
Cdd:cd13123 217 VLKLMLPALLGVSVSQINLLVDTILASFLPEGSISALYYAD-RLYQLPLgIFGVAIATALLPRLSRLAaAGDLDEFRRTL 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 298 KK--RSVQFFLMAFgiAIFMTLGAKWIMWLAYG-EKFVPSAT-----VLQIHV-----WAGCFIFVRALISQHLIITgne 364
Cdd:cd13123 296 SRglRLVLFLLLPA--AVGLIVLAEPIVRLLFErGAFTAEDTlmtasALAAYAlglpaFALVKLLSRAFYALKDTKT--- 370
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2568117599 365 plSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISyAYASFFFLF 411
Cdd:cd13123 371 --PVKIAVIAVAVNILLNLLLIKPLGHVGLALATSLS-AWVNALLLL 414
|
|
| MATE_MepA_like |
cd13143 |
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to ... |
305-411 |
1.47e-04 |
|
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.
Pssm-ID: 240548 [Multi-domain] Cd Length: 426 Bit Score: 44.04 E-value: 1.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 305 FLMAFGIAIFMTLGAKWIMWL--AYGEKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLN 382
Cdd:cd13143 92 LILGLLLTILGLLFLDPLLRLlgASGELLPYAVDYLRIILLGAPFTILSSVLNNLLRAEGKPKLAMLGMLIGAVLNIILD 171
|
90 100 110
....*....|....*....|....*....|.
gi 2568117599 383 LWLIPI--YGIEGAAWATLISYAyASFFFLF 411
Cdd:cd13143 172 PLFIFVlgLGIAGAALATVIAQL-ISLLLLL 201
|
|
| MurJ |
COG0728 |
Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis) [Cell wall/membrane/envelope ... |
142-411 |
2.22e-04 |
|
Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis) [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 440492 [Multi-domain] Cd Length: 503 Bit Score: 43.60 E-value: 2.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 142 NYRGHFRAVALSKVVVSILTLtarVVALIFGANVDTLLLVVGIEFLLTGALQYYWHRRYAPQEpGLSLK-YFSWQSS--K 218
Cdd:COG0728 147 NARGRFAAPALAPVLLNLVII---AGLLLLAPLFGPGIYALAWGVLLGGVLQLLIQLPALRRL-GLRLRpRFDLRDPgvR 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 219 ELLKRSSWLWLSGVVSVIYLKIDTIMIEQMIGIAATGQYTAvARLSELWY-VIPVTLAARYYPDLLKAY-NKNWESYLCI 296
Cdd:COG0728 223 RVLKLMLPALLGVSVSQINLLVDTILASFLPEGSVSALYYA-DRLYQLPLgLFGVAIGTALLPRLSRAAaAGDLEEFRRT 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 297 LKKRSVQFFLMAFGIAIFMTLGAKWIMWLAYG-EKFVPSATV----------LQIHVWAGCFIFVRALISQHLIITgnep 365
Cdd:COG0728 302 LSRGLRLVLLLTLPAAVGLIVLAEPIVRLLFErGAFTAEDTAltalalaayaLGLPAFALVKVLARAFYARQDTRT---- 377
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 2568117599 366 lSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATLISYAYASFFFLF 411
Cdd:COG0728 378 -PVRIAVIAVVVNIVLNLLLVPPLGHAGLALATSLSALVNALLLLV 422
|
|
| MATE_NorM_like |
cd13137 |
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to ... |
305-411 |
2.86e-04 |
|
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240542 [Multi-domain] Cd Length: 432 Bit Score: 42.88 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 305 FLMAFGIAIFMTLGAKWIMWLAYGEKFV--PSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLN 382
Cdd:cd13137 88 LLLSLPLALLGLLFAEPLLRLLGADPEViaLALTYLRIVLLGIPFFFLSLVGNAALRGAGDTKTPMYIMIIVNVLNIVLD 167
|
90 100 110
....*....|....*....|....*....|....*
gi 2568117599 383 ------LWLIPIYGIEGAAWATLISYAYASFFFLF 411
Cdd:cd13137 168 yvlifgLWGFPGLGVAGAALATVISRVVGALLLLF 202
|
|
| MATE_like_7 |
cd13133 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; The ... |
305-412 |
4.04e-04 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240538 [Multi-domain] Cd Length: 438 Bit Score: 42.51 E-value: 4.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 305 FLMAFGIAIFMTLGAKWIMWLAYGEKFVPSATV--LQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLN 382
Cdd:cd13133 92 LLLAPLLALLSALAAPLLFLLLGHSPEVQALEVeyFRIRILGAPFSLLGAALRAFFSGIGRTRVVMVANLVMVVVNIVLD 171
|
90 100 110
....*....|....*....|....*....|....*.
gi 2568117599 383 LWLI------PIYGIEGAAWATLISYAYASFFFLFC 412
Cdd:cd13133 172 YALIfgklgfPAMGIAGAAIATVIAEAVSLLFFLLL 207
|
|
| MATE_like_1 |
cd13140 |
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; The ... |
304-411 |
4.44e-04 |
|
Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. MATE has also been identified as a large multigene family in plants, where the proteins are linked to disease resistance. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240545 [Multi-domain] Cd Length: 435 Bit Score: 42.51 E-value: 4.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 304 FFLMAFGIAIFMTLGAKWIMWLAYgekfvpsaTVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLN- 382
Cdd:cd13140 102 LLLFAKPLIGFFNLGDAEVISLAI--------TYLRIVALGLIFSFLNPVFTGIFNALGDSKTPFIINAIGLVLNIILDp 173
|
90 100 110
....*....|....*....|....*....|....
gi 2568117599 383 -----LWLIPIYGIEGAAWATLISYAYASFFFLF 411
Cdd:cd13140 174 llifgFGPFPALGVAGAALATVLAQAIVFLLFLY 207
|
|
| MATE_yoeA_like |
cd13138 |
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to ... |
304-411 |
1.58e-03 |
|
Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Bacillus subtilis yoeA; The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.
Pssm-ID: 240543 [Multi-domain] Cd Length: 431 Bit Score: 40.52 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 304 FFLMAFGIAIFMTLGAKWIMWLAY--GEKFVPSATVLQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLL 381
Cdd:cd13138 90 FLILGIVLTILGLLFAPPILRLMNtpAEILELAVSYLRICFLGIPFIFGYNAYSAILRGLGDSKTPLYFVIIACVLNIIL 169
|
90 100 110
....*....|....*....|....*....|..
gi 2568117599 382 NLWLI--PIYGIEGAAWATLISYAyASFFFLF 411
Cdd:cd13138 170 DLLFIavFHMGVAGAALATVIAQA-ISVLLAL 200
|
|
| MATE_DinF_like |
cd13136 |
DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE) ... |
306-425 |
2.82e-03 |
|
DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins; Escherichia coli DinF is a membrane protein that has been found to protect cells against oxidative stress and bile salts. The expression of DinF is regulated as part of the SOS system. It may act by detoxifying oxidizing molecules that have the potential to damage DNA. Some member of this family have been reported to enhance the virulence of plant pathogenic bacteria by enhancing their ability to grow in the presence of toxic compounds. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).
Pssm-ID: 240541 [Multi-domain] Cd Length: 424 Bit Score: 39.85 E-value: 2.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 306 LMAFGIAIFMTLGAKWIMWLAYGeKFVPSATV-------LQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILN 378
Cdd:cd13136 88 LLALAIGLLLILLQSPLLALALL-LLGASAAVaalarqyLRIRILGAPAVLLNYVATGWFRGLQDTRTPLILQIVGNVVN 166
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2568117599 379 VLLNLWLIPI--YGIEGAAWATLIS-YAYASFFFLFCSGKTRAHFWQLLK 425
Cdd:cd13136 167 IVLDPLFVFGlgWGVAGAALATVIAqYLGALLGLWLLRRRVRLLGKSLSR 216
|
|
| PRK10459 |
PRK10459 |
MOP flippase family protein; |
35-425 |
7.44e-03 |
|
MOP flippase family protein;
Pssm-ID: 236697 [Multi-domain] Cd Length: 492 Bit Score: 38.48 E-value: 7.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 35 ARMLGDEALGVYGVVMVWAAFLTPLSSMGLNN-LVQKMASSQTDplrartiLQSALWLRLIAGLFFAVLMILG---FAVF 110
Cdd:PRK10459 33 ARILDNHQFGLLTMSLVIIGFADTLSDMGIGAsIIQRQDISHLQ-------LSTLYWLNVGLGIVVFVLVFLLsplIADF 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 111 YPH---YFAIGPAAISALF--ILQSFSAMMLCEYdqnyrgHFRAVALSKVVVSILTLTARVVALIFGANVDTLLLVVGIE 185
Cdd:PRK10459 106 YHNpelAPLIKTLSLAFVIipIGQQFRALLQKEL------EFNKLAKIEISAVVAGFTFAVVSAFFWPGALAAILGYLVN 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 186 FLLTGALQYYWHRRYAPqePGLslkYFSWQSSKELLKRSSWLWLSGVVSVIYLKIDTIMIEQMIGIAATGQYTAVARLSe 265
Cdd:PRK10459 180 SSVRTLLFGYFGRKIYR--PAL---HFSLASVKPNLSFGAWQTAERIINYLNTNIDTILIGRILGAEVLGGYNLAYNVA- 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 266 lwyVIPVT-----LAARYYPDLLKAYNKN---WESYLCILKKRSVQFFLMAFGIAIFmtlgAKWIMWLAYGEKFVPSATV 337
Cdd:PRK10459 254 ---TVPPMkinpiITRVAFPVFAKIQDDTeklRVGFLKLLSVLGIINFPLLLGLMVV----SNNFVPLVFGEKWNSAIPI 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2568117599 338 LQIHVWAGCFIFVRALISQHLIITGNEPLSLLSHGVGAILNVLLNLWLIPIYGIEGAAWATL---ISYAYASFFFL---F 411
Cdd:PRK10459 327 LQLLCIVGLLRSVGNPIGSLLLAKGRADLSFKWNVFKTFLFIPAIVIGGQLAGLIGVALGFLlvqIINTILSYFLMikpV 406
|
410
....*....|....
gi 2568117599 412 CSGKTRAHFWQLLK 425
Cdd:PRK10459 407 IGLSYRQYILSIWK 420
|
|
| |
