|
Name |
Accession |
Description |
Interval |
E-value |
| TrmA |
COG2265 |
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure ... |
1-373 |
9.32e-74 |
|
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 441866 [Multi-domain] Cd Length: 377 Bit Score: 234.69 E-value: 9.32e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 1 LIEEPLRQAGLWREGLILPPSGQPAAFaqHFRNKAVLYPSVINGIGHFGYYAARSQILVPAEDCPQTPVWMEEAARTLAP 80
Cdd:COG2265 93 VVREALERIGGLPEVEVEPIIGSPEPW--GYRNRARLSVRRTDGRLRLGFYARGSHELVDIDECPLLDPALNALLPALRE 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 81 FLsepaltpapeAAVSNGTGVLRSLLLREapgsgermavlvvraltadllaakekliaalapcklqsllvnvhptpgsav 160
Cdd:COG2265 171 LL----------AELGARRGELRHLVVRA--------------------------------------------------- 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 161 lsfapdalvvwaGRSSIEAELMDLAFTVGPQTFLQVNTPQTPVLYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgp 240
Cdd:COG2265 190 ------------GRDYLTERLGGLTFRISPGSFFQVNPEQAEALYAAALEWLDLTGGERVLDLYCGVGTFALPLARRA-- 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 241 hGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAALKegfpdGFKPTKIIVDPAYQGMAGGAAKALADLfsl 320
Cdd:COG2265 256 -KKVIGVEIVPEAVEDARENARLNGLKNVEFVAGDLEEVLPELLW-----GGRPDVVVLDPPRAGAGPEVLEALAAL--- 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2575808847 321 pnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDLFPGAMHLELVAAFS 373
Cdd:COG2265 327 --GPRRIVYVSCNPATLARDLALLVEGGYRLEKVQPVDMFPHTHHVESVALLE 377
|
|
| rumA |
TIGR00479 |
23S rRNA (uracil-5-)-methyltransferase RumA; This protein family was first proposed to be RNA ... |
49-367 |
2.41e-55 |
|
23S rRNA (uracil-5-)-methyltransferase RumA; This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA. [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129571 [Multi-domain] Cd Length: 431 Bit Score: 188.49 E-value: 2.41e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 49 GYYAARSQILVPAEDC----PQTPVWMEEAARTLAPFlsepaltpapEAAVSNG---TGVLRSLLLREAPGSGERMAVLV 121
Cdd:TIGR00479 132 GFYQKGSHDIVDVKQCpvqaPALNALLPKVRAILENF----------GASRYLEhkeLGQARHGVLRIGRHTGELSSVDR 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 122 VRALTadlLAAKEKLIAALAP--CKLQSLLVNVHPTPGSAVLSfapDALVVWAGRSSIEAELMDLAFTVGPQTFLQVNTP 199
Cdd:TIGR00479 202 TALER---FPHKEELDLYLQPdsPDVKSICQNINPEKTNVIFG---EETEVIAGEMPIYDKSGDLSFTFSARDFIQVNSG 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 200 QTPVLYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgphGRALGVERVEASIVCARENAARNSISQAAFVAEPTETF 279
Cdd:TIGR00479 276 QNEKLVDRALEWLELQGEERVLDAYCGMGTFTLPLAKQA---KSVVGVEGVPESVEKAQQNAELNGIANVTFYHGTLETV 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 280 LSAALKEgfpdGFKPTKIIVDPAYQGMAGGAAKALADLfslpnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDL 359
Cdd:TIGR00479 353 LPKQPWA----GNGFDKVLLDPPRKGCAAGVLRTIIKL-----KPERIVYVSCNPATLARDLEALCKAGYTIARVQPVDM 423
|
....*...
gi 2575808847 360 FPGAMHLE 367
Cdd:TIGR00479 424 FPHTGHVE 431
|
|
| rumA |
PRK13168 |
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; |
11-375 |
1.13e-36 |
|
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;
Pssm-ID: 237291 [Multi-domain] Cd Length: 443 Bit Score: 138.37 E-value: 1.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 11 LWREG-----LILPP-SGQPaafaQHFRNKA---VLYPSVINGIgHFGYYAARSQILVPAEDCPqtpvwmeeaarTLAPF 81
Cdd:PRK13168 111 LKHLAgvepeEVLPPiAGPP----WGYRRRArlsVRYVPKKGQL-LVGFREKNSSDIVDIDQCP-----------VLVPP 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 82 LSEpALTPAPEaavsngtgVLRSLLLREAPG-----SGERMAVLVVRALTAdlLAAK--EKLIAALAPCKLQSLL----- 149
Cdd:PRK13168 175 LSA-LLPPLRA--------LLSSLSAKRRLGhvelaQGDNGTALVLRHLEP--LSEAdrAKLRAFAEQHGLQLYLqpkgp 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 150 -VNVHPTPGSAVLSFApdaLVVWAgrssieaelMDLAFTvgPQTFLQVNTPQTPVLYEKALDAADVQPGDQILDLYCGVG 228
Cdd:PRK13168 244 dLVHLLGPADAQLSYY---LPEFG---------LRLAFS--PRDFIQVNAQVNQKMVARALEWLDPQPGDRVLDLFCGLG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 229 TITLAAARRAGphgRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAAL--KEGFpdgfkpTKIIVDPAYQGm 306
Cdd:PRK13168 310 NFTLPLARQAA---EVVGVEGVEAMVERARENARRNGLDNVTFYHANLEEDFTDQPwaLGGF------DKVLLDPPRAG- 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2575808847 307 AGGAAKALADLfslpnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDLFPGAMHLELVAAFSSK 375
Cdd:PRK13168 380 AAEVMQALAKL-----GPKRIVYVSCNPATLARDAGVLVEAGYRLKRAGMLDMFPHTGHVESMALFERG 443
|
|
| tRNA_U5-meth_tr |
pfam05958 |
tRNA (Uracil-5-)-methyltransferase; This family consists of (Uracil-5-)-methyltransferases EC: ... |
193-367 |
4.17e-10 |
|
tRNA (Uracil-5-)-methyltransferase; This family consists of (Uracil-5-)-methyltransferases EC:2.1.1.35 from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial and eukaryotic tRNAs. The methylation of U54 is catalyzed by the tRNA(m5U54)methyltransferase, which in Saccharomyces cerevisiae is encoded by the nonessential TRM2 gene. It is thought that tRNA modification enzymes might have a role in tRNA maturation not necessarily linked to their known catalytic activity.
Pssm-ID: 428692 Cd Length: 357 Bit Score: 60.92 E-value: 4.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 193 FLQVNTPQTPVLYEKALDAADVQPGDqILDLYCGVGTITLAAARRagpHGRALGVERVEASIVCARENAARNSISQAAFV 272
Cdd:pfam05958 179 FTQPNAAVNIKMLEWACDVTQGSKGD-LLELYCGNGNFSLALARN---FRKVLATEIAKPSVAAAQYNIAANNIDNVQII 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 273 AEPTETFLSAA--------LKEGFPDGFKPTKIIVDPAYQGMAggaakalADLFSLPNGPKRLAYVSCNPKSFARDAKEL 344
Cdd:pfam05958 255 RMSAEEFTQAMngvrefnrLKGIDLKSYNCSTIFVDPPRAGLD-------PETLKLVQAYPRILYISCNPETLCANLEQL 327
|
170 180
....*....|....*....|...
gi 2575808847 345 AAAGlTLESIYPVDLFPGAMHLE 367
Cdd:pfam05958 328 SKTH-RVERFALFDQFPYTHHME 349
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
220-330 |
6.79e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.65 E-value: 6.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 220 ILDLYCGVGTITLAAARRAGphGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAALKegfpdgfKPTKIIV 299
Cdd:cd02440 2 VLDLGCGTGALALALASGPG--ARVTGVDISPVALELARKAAAALLADNVEVLKGDAEELPPEADE-------SFDVIIS 72
|
90 100 110
....*....|....*....|....*....|.
gi 2575808847 300 DPAYQGMAGGAAKALADLFSLPNGPKRLAYV 330
Cdd:cd02440 73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT 103
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TrmA |
COG2265 |
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure ... |
1-373 |
9.32e-74 |
|
tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family [Translation, ribosomal structure and biogenesis]; tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 441866 [Multi-domain] Cd Length: 377 Bit Score: 234.69 E-value: 9.32e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 1 LIEEPLRQAGLWREGLILPPSGQPAAFaqHFRNKAVLYPSVINGIGHFGYYAARSQILVPAEDCPQTPVWMEEAARTLAP 80
Cdd:COG2265 93 VVREALERIGGLPEVEVEPIIGSPEPW--GYRNRARLSVRRTDGRLRLGFYARGSHELVDIDECPLLDPALNALLPALRE 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 81 FLsepaltpapeAAVSNGTGVLRSLLLREapgsgermavlvvraltadllaakekliaalapcklqsllvnvhptpgsav 160
Cdd:COG2265 171 LL----------AELGARRGELRHLVVRA--------------------------------------------------- 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 161 lsfapdalvvwaGRSSIEAELMDLAFTVGPQTFLQVNTPQTPVLYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgp 240
Cdd:COG2265 190 ------------GRDYLTERLGGLTFRISPGSFFQVNPEQAEALYAAALEWLDLTGGERVLDLYCGVGTFALPLARRA-- 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 241 hGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAALKegfpdGFKPTKIIVDPAYQGMAGGAAKALADLfsl 320
Cdd:COG2265 256 -KKVIGVEIVPEAVEDARENARLNGLKNVEFVAGDLEEVLPELLW-----GGRPDVVVLDPPRAGAGPEVLEALAAL--- 326
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 2575808847 321 pnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDLFPGAMHLELVAAFS 373
Cdd:COG2265 327 --GPRRIVYVSCNPATLARDLALLVEGGYRLEKVQPVDMFPHTHHVESVALLE 377
|
|
| rumA |
TIGR00479 |
23S rRNA (uracil-5-)-methyltransferase RumA; This protein family was first proposed to be RNA ... |
49-367 |
2.41e-55 |
|
23S rRNA (uracil-5-)-methyltransferase RumA; This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA. [Protein synthesis, tRNA and rRNA base modification]
Pssm-ID: 129571 [Multi-domain] Cd Length: 431 Bit Score: 188.49 E-value: 2.41e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 49 GYYAARSQILVPAEDC----PQTPVWMEEAARTLAPFlsepaltpapEAAVSNG---TGVLRSLLLREAPGSGERMAVLV 121
Cdd:TIGR00479 132 GFYQKGSHDIVDVKQCpvqaPALNALLPKVRAILENF----------GASRYLEhkeLGQARHGVLRIGRHTGELSSVDR 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 122 VRALTadlLAAKEKLIAALAP--CKLQSLLVNVHPTPGSAVLSfapDALVVWAGRSSIEAELMDLAFTVGPQTFLQVNTP 199
Cdd:TIGR00479 202 TALER---FPHKEELDLYLQPdsPDVKSICQNINPEKTNVIFG---EETEVIAGEMPIYDKSGDLSFTFSARDFIQVNSG 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 200 QTPVLYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgphGRALGVERVEASIVCARENAARNSISQAAFVAEPTETF 279
Cdd:TIGR00479 276 QNEKLVDRALEWLELQGEERVLDAYCGMGTFTLPLAKQA---KSVVGVEGVPESVEKAQQNAELNGIANVTFYHGTLETV 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 280 LSAALKEgfpdGFKPTKIIVDPAYQGMAGGAAKALADLfslpnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDL 359
Cdd:TIGR00479 353 LPKQPWA----GNGFDKVLLDPPRKGCAAGVLRTIIKL-----KPERIVYVSCNPATLARDLEALCKAGYTIARVQPVDM 423
|
....*...
gi 2575808847 360 FPGAMHLE 367
Cdd:TIGR00479 424 FPHTGHVE 431
|
|
| rumA |
PRK13168 |
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; |
11-375 |
1.13e-36 |
|
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;
Pssm-ID: 237291 [Multi-domain] Cd Length: 443 Bit Score: 138.37 E-value: 1.13e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 11 LWREG-----LILPP-SGQPaafaQHFRNKA---VLYPSVINGIgHFGYYAARSQILVPAEDCPqtpvwmeeaarTLAPF 81
Cdd:PRK13168 111 LKHLAgvepeEVLPPiAGPP----WGYRRRArlsVRYVPKKGQL-LVGFREKNSSDIVDIDQCP-----------VLVPP 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 82 LSEpALTPAPEaavsngtgVLRSLLLREAPG-----SGERMAVLVVRALTAdlLAAK--EKLIAALAPCKLQSLL----- 149
Cdd:PRK13168 175 LSA-LLPPLRA--------LLSSLSAKRRLGhvelaQGDNGTALVLRHLEP--LSEAdrAKLRAFAEQHGLQLYLqpkgp 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 150 -VNVHPTPGSAVLSFApdaLVVWAgrssieaelMDLAFTvgPQTFLQVNTPQTPVLYEKALDAADVQPGDQILDLYCGVG 228
Cdd:PRK13168 244 dLVHLLGPADAQLSYY---LPEFG---------LRLAFS--PRDFIQVNAQVNQKMVARALEWLDPQPGDRVLDLFCGLG 309
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 229 TITLAAARRAGphgRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAAL--KEGFpdgfkpTKIIVDPAYQGm 306
Cdd:PRK13168 310 NFTLPLARQAA---EVVGVEGVEAMVERARENARRNGLDNVTFYHANLEEDFTDQPwaLGGF------DKVLLDPPRAG- 379
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2575808847 307 AGGAAKALADLfslpnGPKRLAYVSCNPKSFARDAKELAAAGLTLESIYPVDLFPGAMHLELVAAFSSK 375
Cdd:PRK13168 380 AAEVMQALAKL-----GPKRIVYVSCNPATLARDAGVLVEAGYRLKRAGMLDMFPHTGHVESMALFERG 443
|
|
| rumB |
PRK03522 |
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; |
63-370 |
1.59e-25 |
|
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;
Pssm-ID: 235128 [Multi-domain] Cd Length: 315 Bit Score: 105.34 E-value: 1.59e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 63 DCPQTPVWMEEAARTLAPFLSEPALTPApeaAVSNGTGVLRSLLLREAPGSGERMAVLVVR--ALTADLLAAKEKLIAAL 140
Cdd:PRK03522 26 DCPLYPASFAPVFAALKPFIARAGLTPY---NVARKRGELKYILLTESQSDGELMLRFVLRseTKLARLRRALPWLQAQL 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 141 APCKLQSllVNVHPTPgSAVLSfaPDALVVWAGRSSIEAELMDLAFTVGPQTFLQVNTPQTPVLYEKALD-AADVQPgDQ 219
Cdd:PRK03522 103 PQLKVIS--VNIQPVH-MAILE--GEEEIFLTEQQALPERFNGVPLFIRPQSFFQTNPAVAAQLYATARDwVRELPP-RS 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 220 ILDLYCGVGTITLAAARragPHGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAAlkegfpdGFKPTKIIV 299
Cdd:PRK03522 177 MWDLFCGVGGFGLHCAT---PGMQLTGIEISAEAIACAKQSAAELGLTNVQFQALDSTQFATAQ-------GEVPDLVLV 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2575808847 300 DPAYQGMaggaAKALADLFSlPNGPKRLAYVSCNPKSFARDAKELaaAGLTLESIYPVDLFPGAMHLELVA 370
Cdd:PRK03522 247 NPPRRGI----GKELCDYLS-QMAPRFILYSSCNAQTMAKDLAHL--PGYRIERVQLFDMFPHTAHYEVLT 310
|
|
| tRNA_U5-meth_tr |
pfam05958 |
tRNA (Uracil-5-)-methyltransferase; This family consists of (Uracil-5-)-methyltransferases EC: ... |
193-367 |
4.17e-10 |
|
tRNA (Uracil-5-)-methyltransferase; This family consists of (Uracil-5-)-methyltransferases EC:2.1.1.35 from bacteria, archaea and eukaryotes. A 5-methyluridine (m(5)U) residue at position 54 is a conserved feature of bacterial and eukaryotic tRNAs. The methylation of U54 is catalyzed by the tRNA(m5U54)methyltransferase, which in Saccharomyces cerevisiae is encoded by the nonessential TRM2 gene. It is thought that tRNA modification enzymes might have a role in tRNA maturation not necessarily linked to their known catalytic activity.
Pssm-ID: 428692 Cd Length: 357 Bit Score: 60.92 E-value: 4.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 193 FLQVNTPQTPVLYEKALDAADVQPGDqILDLYCGVGTITLAAARRagpHGRALGVERVEASIVCARENAARNSISQAAFV 272
Cdd:pfam05958 179 FTQPNAAVNIKMLEWACDVTQGSKGD-LLELYCGNGNFSLALARN---FRKVLATEIAKPSVAAAQYNIAANNIDNVQII 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 273 AEPTETFLSAA--------LKEGFPDGFKPTKIIVDPAYQGMAggaakalADLFSLPNGPKRLAYVSCNPKSFARDAKEL 344
Cdd:pfam05958 255 RMSAEEFTQAMngvrefnrLKGIDLKSYNCSTIFVDPPRAGLD-------PETLKLVQAYPRILYISCNPETLCANLEQL 327
|
170 180
....*....|....*....|...
gi 2575808847 345 AAAGlTLESIYPVDLFPGAMHLE 367
Cdd:pfam05958 328 SKTH-RVERFALFDQFPYTHHME 349
|
|
| PRK05031 |
PRK05031 |
tRNA (uracil-5-)-methyltransferase; Validated |
208-345 |
6.74e-09 |
|
tRNA (uracil-5-)-methyltransferase; Validated
Pssm-ID: 235332 Cd Length: 362 Bit Score: 57.15 E-value: 6.74e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 208 ALDAADVQPGDqILDLYCGVGTITLAAARRagpHGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFlSAALKEG 287
Cdd:PRK05031 199 ALDATKGSKGD-LLELYCGNGNFTLALARN---FRRVLATEISKPSVAAAQYNIAANGIDNVQIIRMSAEEF-TQAMNGV 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2575808847 288 FP---------DGFKPTKIIVDPAYQGMAggaakalADLFSLPNGPKRLAYVSCNPKSFARDAKELA 345
Cdd:PRK05031 274 REfnrlkgidlKSYNFSTIFVDPPRAGLD-------DETLKLVQAYERILYISCNPETLCENLETLS 333
|
|
| PRK08317 |
PRK08317 |
hypothetical protein; Provisional |
206-272 |
1.85e-08 |
|
hypothetical protein; Provisional
Pssm-ID: 181382 [Multi-domain] Cd Length: 241 Bit Score: 54.56 E-value: 1.85e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2575808847 206 EKALDAADVQPGDQILDLYCGVGTITLAAARRAGPHGRALGVERVEASIVCARENAArNSISQAAFV 272
Cdd:PRK08317 9 ARTFELLAVQPGDRVLDVGCGPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAA-GLGPNVEFV 74
|
|
| RsmC |
COG2813 |
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA ... |
209-273 |
4.92e-08 |
|
16S rRNA G1207 methylase RsmC [Translation, ribosomal structure and biogenesis]; 16S rRNA G1207 methylase RsmC is part of the Pathway/BioSystem: 16S rRNA modification
Pssm-ID: 442062 [Multi-domain] Cd Length: 191 Bit Score: 52.50 E-value: 4.92e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2575808847 209 LDAADVQPGDQILDLYCGVGTITLAAARRAgPHGRALGVERVEASIVCARENAARNSISQAAFVA 273
Cdd:COG2813 42 LEHLPEPLGGRVLDLGCGYGVIGLALAKRN-PEARVTLVDVNARAVELARANAAANGLENVEVLW 105
|
|
| HemK |
COG2890 |
Methylase of polypeptide chain release factors [Translation, ribosomal structure and ... |
178-264 |
8.08e-08 |
|
Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis];
Pssm-ID: 442135 [Multi-domain] Cd Length: 282 Bit Score: 53.23 E-value: 8.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 178 EAELMDLAFTVGPQTFlqVNTPQTPVLYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgPHGRALGVERVEASIVCA 257
Cdd:COG2890 76 EAEFYGLEFKVDPGVL--IPRPETEELVELALALLPAGAPPRVLDLGTGSGAIALALAKER-PDARVTAVDISPDALAVA 152
|
....*..
gi 2575808847 258 RENAARN 264
Cdd:COG2890 153 RRNAERL 159
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
216-288 |
9.43e-08 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 50.88 E-value: 9.43e-08
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2575808847 216 PGDQILDLYCGVGTITLAAARRAGPHGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAALKEGF 288
Cdd:pfam13847 3 KGMRVLDLGCGTGHLSFELAEELGPNAEVVGIDISEEAIEKARENAQKLGFDNVEFEQGDIEELPELLEDDKF 75
|
|
| TrmN6 |
COG4123 |
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) ... |
210-366 |
1.26e-07 |
|
tRNA1(Val) A37 N6-methylase TrmN6 [Translation, ribosomal structure and biogenesis]; tRNA1(Val) A37 N6-methylase TrmN6 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 443299 [Multi-domain] Cd Length: 238 Bit Score: 52.07 E-value: 1.26e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 210 DAADVQPGDQILDLYCGVGTITLAAARRaGPHGRALGVERVEASIVCARENAARNSISQAAFVAEptetflsAALKEgFP 289
Cdd:COG4123 31 AFAPVKKGGRVLDLGTGTGVIALMLAQR-SPGARITGVEIQPEAAELARRNVALNGLEDRITVIH-------GDLKE-FA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 290 DGFKPTK---IIVDPAYQgmaggaaKALADLFSlPNGPKRLAY--VSCNPKSFARDAKELAAAG--LTLesIYPVDLFPG 362
Cdd:COG4123 102 AELPPGSfdlVVSNPPYF-------KAGSGRKS-PDEARAIARheDALTLEDLIRAAARLLKPGgrFAL--IHPAERLAE 171
|
....
gi 2575808847 363 AMHL 366
Cdd:COG4123 172 ILAA 175
|
|
| Trm11 |
COG1041 |
tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]; tRNA G10 ... |
212-357 |
4.63e-07 |
|
tRNA G10 N-methylase Trm11 [Translation, ribosomal structure and biogenesis]; tRNA G10 N-methylase Trm11 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 440663 [Multi-domain] Cd Length: 172 Bit Score: 49.56 E-value: 4.63e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 212 ADVQPGDQILDLYCGVGTItLAAARRAGPhgRALGVERVEASIVCARENAARNSISQAAFVAEPTETFlsaALKEGFPDG 291
Cdd:COG1041 22 AGAKEGDTVLDPFCGTGTI-LIEAGLLGR--RVIGSDIDPKMVEGARENLEHYGYEDADVIRGDARDL---PLADESVDA 95
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2575808847 292 fkptkIIVDPAYQGMAGGAAKALADLFS---------LPNGpKRLAYVScnPKSFARDAKElaaAGLTLESIYPV 357
Cdd:COG1041 96 -----IVTDPPYGRSSKISGEELLELYEkaleeaarvLKPG-GRVVIVT--PRDIDELLEE---AGFKVLERHEQ 159
|
|
| ubiE |
PRK00216 |
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol ... |
207-247 |
6.23e-07 |
|
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE;
Pssm-ID: 234689 [Multi-domain] Cd Length: 239 Bit Score: 50.15 E-value: 6.23e-07
10 20 30 40
....*....|....*....|....*....|....*....|.
gi 2575808847 207 KALDAADVQPGDQILDLYCGVGTITLAAARRAGPHGRALGV 247
Cdd:PRK00216 42 KTIKWLGVRPGDKVLDLACGTGDLAIALAKAVGKTGEVVGL 82
|
|
| arsM |
PRK11873 |
arsenite methyltransferase; |
212-271 |
2.61e-06 |
|
arsenite methyltransferase;
Pssm-ID: 237007 [Multi-domain] Cd Length: 272 Bit Score: 48.41 E-value: 2.61e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 212 ADVQPGDQILDLYCGVGTITLAAARRAGPHGRALGVERVEASIVCARENAARNSISQAAF 271
Cdd:PRK11873 73 AELKPGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF 132
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
204-263 |
4.87e-06 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 45.76 E-value: 4.87e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 204 LYEKALDAADVQPGDQILDLYCGVGTITLAAARRAgphGRALGVERVEASIVCARENAAR 263
Cdd:COG2226 10 GREALLAALGLRPGARVLDLGCGTGRLALALAERG---ARVTGVDISPEMLELARERAAE 66
|
|
| PCMT |
pfam01135 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); |
131-272 |
1.36e-05 |
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT);
Pssm-ID: 395902 [Multi-domain] Cd Length: 205 Bit Score: 45.82 E-value: 1.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 131 AAKEKLIaalapCKLQSLLVNVHPTPGSAVLS-----FAPDALVVWAgrssieaeLMDLAFTVGPQTflqvnTPQTPVLY 205
Cdd:pfam01135 1 NRNEALI-----ENLKNYGVIKSDKVAEAMLAvdreeFVPESFKSYA--------YEDIPLSIGYGQ-----TISAPHMH 62
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2575808847 206 EKALDAADVQPGDQILDLYCGVGTITLAAARRAGPHGRALGVERVEASIVCARENAARNSISQAAFV 272
Cdd:pfam01135 63 AMMLELLELKPGMRVLEIGSGSGYLTACFARMVGEVGRVVSIEHIPELVEIARRNLEKLGLENVIVV 129
|
|
| Trm5 |
COG2520 |
tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]; tRNA G37 ... |
205-267 |
3.17e-05 |
|
tRNA G37 N-methylase Trm5 [Translation, ribosomal structure and biogenesis]; tRNA G37 N-methylase Trm5 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 442010 [Multi-domain] Cd Length: 333 Bit Score: 45.62 E-value: 3.17e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2575808847 205 YEKALDAADVQPGDQILDLYCGVGTITLAAARRAGphGRALGVERVEASIVCARENAARNSIS 267
Cdd:COG2520 169 TERLRIAELVKPGERVLDMFAGVGPFSIPIAKRSG--AKVVAIDINPDAVEYLKENIRLNKVE 229
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
204-263 |
3.88e-05 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 43.76 E-value: 3.88e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 204 LYEKALDAADVQPGDQILDLYCGVGTITLAAARRAGphGRALGVERVEASIVCARENAAR 263
Cdd:COG2230 39 KLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYG--VRVTGVTLSPEQLEYARERAAE 96
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
220-330 |
6.79e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.65 E-value: 6.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 220 ILDLYCGVGTITLAAARRAGphGRALGVERVEASIVCARENAARNSISQAAFVAEPTETFLSAALKegfpdgfKPTKIIV 299
Cdd:cd02440 2 VLDLGCGTGALALALASGPG--ARVTGVDISPVALELARKAAAALLADNVEVLKGDAEELPPEADE-------SFDVIIS 72
|
90 100 110
....*....|....*....|....*....|.
gi 2575808847 300 DPAYQGMAGGAAKALADLFSLPNGPKRLAYV 330
Cdd:cd02440 73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT 103
|
|
| COG4076 |
COG4076 |
Predicted RNA methylase [General function prediction only]; |
205-268 |
1.83e-04 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 443253 [Multi-domain] Cd Length: 230 Bit Score: 42.72 E-value: 1.83e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2575808847 205 YEKALDAAdVQPGDQILDLYCGVGTITLAAArRAGPhGRALGVERVEASIVCARENAARNSISQ 268
Cdd:COG4076 25 FKAAIERV-VKPGDVVLDIGTGSGLLSMLAA-RAGA-KKVYAVEVNPDIAAVARRIIAANGLSD 85
|
|
| CobL |
COG2242 |
Precorrin-6B methylase 2 [Coenzyme transport and metabolism]; Precorrin-6B methylase 2 is part ... |
208-263 |
2.95e-04 |
|
Precorrin-6B methylase 2 [Coenzyme transport and metabolism]; Precorrin-6B methylase 2 is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 441843 [Multi-domain] Cd Length: 403 Bit Score: 42.85 E-value: 2.95e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2575808847 208 ALDAADVQPGDQILDLYCGVGTITLAAARRAgPHGRALGVERVEASIVCARENAAR 263
Cdd:COG2242 239 TLAKLALRPGDVLWDIGAGSGSVSIEAARLA-PGGRVYAIERDPERAALIRANARR 293
|
|
| MTS |
pfam05175 |
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit ... |
209-273 |
2.95e-04 |
|
Methyltransferase small domain; This domain is found in ribosomal RNA small subunit methyltransferase C as well as other methyltransferases.
Pssm-ID: 428349 [Multi-domain] Cd Length: 170 Bit Score: 41.04 E-value: 2.95e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2575808847 209 LDAADVQPGDQILDLYCGVGTITLAAARRaGPHGRALGVERVEASIVCARENAARNSISQAAFVA 273
Cdd:pfam05175 24 LEHLPKDLSGKVLDLGCGAGVLGAALAKE-SPDAELTMVDINARALESARENLAANGLENGEVVA 87
|
|
| Gcd14 |
COG2519 |
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 ... |
200-263 |
3.08e-04 |
|
tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]; tRNA A58 N-methylase Trm61 is part of the Pathway/BioSystem: tRNA modification
Pssm-ID: 442009 [Multi-domain] Cd Length: 249 Bit Score: 42.07 E-value: 3.08e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2575808847 200 QTPVLYEKalDAA------DVQPGDQILDlyCGVGT--ITLAAARRAGPHGRALGVERVEASIVCARENAAR 263
Cdd:COG2519 71 GTQIIYPK--DAGyiiarlDIFPGARVLE--AGTGSgaLTLALARAVGPEGKVYSYERREDFAEIARKNLER 138
|
|
| cbiT |
PRK00377 |
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional |
208-263 |
3.16e-04 |
|
cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Pssm-ID: 234740 Cd Length: 198 Bit Score: 41.71 E-value: 3.16e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2575808847 208 ALDAADVQPGDQILDLYCGVGTITLAAARRAGPHGRALGVERVEASIVCARENAAR 263
Cdd:PRK00377 32 ALSKLRLRKGDMILDIGCGTGSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEK 87
|
|
| PrmA |
pfam06325 |
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal ... |
184-277 |
8.89e-04 |
|
Ribosomal protein L11 methyltransferase (PrmA); This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.
Pssm-ID: 428888 [Multi-domain] Cd Length: 294 Bit Score: 40.71 E-value: 8.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 184 LAFTVGpqtflqvnTPQTPVLYEKALDAAdVQPGDQILDLYCGVGTITLAAArRAGPhGRALGVERVEASIVCARENAAR 263
Cdd:pfam06325 138 MAFGTG--------THPTTKLCLEALERL-VKPGESVLDVGCGSGILAIAAL-KLGA-KKVVGVDIDPVAVRAAKENAEL 206
|
90
....*....|....
gi 2575808847 264 NSISQAAFVAEPTE 277
Cdd:pfam06325 207 NGVEARLEVYLPGD 220
|
|
| UPF0020 |
pfam01170 |
Putative RNA methylase family UPF0020; This domain is probably a methylase. It is associated ... |
212-319 |
1.09e-03 |
|
Putative RNA methylase family UPF0020; This domain is probably a methylase. It is associated with the THUMP domain that also occurs with RNA modification domains.
Pssm-ID: 395932 [Multi-domain] Cd Length: 184 Bit Score: 39.65 E-value: 1.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2575808847 212 ADVQPGDQILDLYCGVGTITLAAA----RRAGPHGRA------LGVERVEASIVCARENAarnsisQAAFVAEPTEtfLS 281
Cdd:pfam01170 24 AGWKPGDPLLDPMCGSGTILIEAAlmgaNIAPGKFDArvraplYGSDIDRRMVQGARLNA------ENAGVGDLIE--FV 95
|
90 100 110
....*....|....*....|....*....|....*....
gi 2575808847 282 AALKEGFPDGFKPTKIIV-DPAYqGMAGGAAKALADLFS 319
Cdd:pfam01170 96 QADAADLPLLEGSVDVIVtNPPY-GIRLGSKGALEALYP 133
|
|
| PRK15102 |
PRK15102 |
trimethylamine-N-oxide reductase TorA; |
12-77 |
2.21e-03 |
|
trimethylamine-N-oxide reductase TorA;
Pssm-ID: 237909 [Multi-domain] Cd Length: 825 Bit Score: 40.42 E-value: 2.21e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2575808847 12 WREGLILPPSGQPaaFAQH--FRNKAVLYP-----SVI----NGIGHFGYyaarsqilvpaEDCPQTPVWMEEAART 77
Cdd:PRK15102 605 WKKGYVEFGEGQP--WVRHadFREDPELNPlgtpsGLIeiysRKIADMGY-----------DDCQGHPMWFEKIERS 668
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
220-264 |
2.40e-03 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 37.16 E-value: 2.40e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2575808847 220 ILDLYCGVGTITLAAARRAGphGRALGVERVEASIVCARENAARN 264
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGG--ARVTGVDLSPEMLERARERAAEA 43
|
|
| prmA |
PRK00517 |
50S ribosomal protein L11 methyltransferase; |
207-274 |
3.38e-03 |
|
50S ribosomal protein L11 methyltransferase;
Pssm-ID: 234786 [Multi-domain] Cd Length: 250 Bit Score: 38.98 E-value: 3.38e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2575808847 207 KALDAADvQPGDQILDLYCGVGTITLAAARragphgraLGVERVEA------SIVCARENAARNSISQAAFVAE 274
Cdd:PRK00517 111 EALEKLV-LPGKTVLDVGCGSGILAIAAAK--------LGAKKVLAvdidpqAVEAARENAELNGVELNVYLPQ 175
|
|
| PRK14968 |
PRK14968 |
putative methyltransferase; Provisional |
205-267 |
3.98e-03 |
|
putative methyltransferase; Provisional
Pssm-ID: 237872 [Multi-domain] Cd Length: 188 Bit Score: 37.96 E-value: 3.98e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2575808847 205 YEKA------LDAADVQPGDQILDLYCGVGTITLAAARRAgphGRALGVERVEASIVCARENAARNSIS 267
Cdd:PRK14968 6 YEPAedsfllAENAVDKKGDRVLEVGTGSGIVAIVAAKNG---KKVVGVDINPYAVECAKCNAKLNNIR 71
|
|
| PrmA |
COG2264 |
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis]; |
207-276 |
5.77e-03 |
|
Ribosomal protein L11 methylase PrmA [Translation, ribosomal structure and biogenesis];
Pssm-ID: 441865 [Multi-domain] Cd Length: 284 Bit Score: 38.23 E-value: 5.77e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2575808847 207 KALDAADvQPGDQILDLYCGVGTITLAAARragphgraLGVERVEA------SIVCARENAARNSISQAAFVAEPT 276
Cdd:COG2264 140 EALEKLL-KPGKTVLDVGCGSGILAIAAAK--------LGAKRVLAvdidpvAVEAARENAELNGVEDRIEVVLGD 206
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
216-263 |
6.60e-03 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 35.95 E-value: 6.60e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2575808847 216 PGDQILDLYCGVGTITLAAARRaGPHGRALGVERVEASIVCARENAAR 263
Cdd:COG4106 1 PPRRVLDLGCGTGRLTALLAER-FPGARVTGVDLSPEMLARARARLPN 47
|
|
| |
