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Conserved domains on  [gi|2581403171|ref|WP_311161313|]
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2Fe-2S iron-sulfur cluster-binding protein [Paracoccus sp. MBLB3053]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PRK11433 super family cl36021
aldehyde oxidoreductase 2Fe-2S subunit; Provisional
 5-174 4.47e-88

aldehyde oxidoreductase 2Fe-2S subunit; Provisional


The actual alignment was detected with superfamily member PRK11433:

Pssm-ID: 236910 [Multi-domain]  Cd Length: 217  Bit Score: 257.01  E-value: 4.47e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   5 PPASVPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEG 84
Cdd:PRK11433   46 APEISPVTLKVNGKTEQLEVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEG 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  85 LGSPDALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGWPSHVSADLTDASGAdmsSDEELRERMSGNLCRCGAY 164
Cdd:PRK11433  126 LGSPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL---TADEIRERMSGNICRCGAY 202

                         170
                  ....*....|
gi 2581403171 165 PNMIAAIREA 174
Cdd:PRK11433  203 SNILEAIEDV 212
 
Name Accession Description Interval E-value
PRK11433 PRK11433
aldehyde oxidoreductase 2Fe-2S subunit; Provisional
 5-174 4.47e-88

aldehyde oxidoreductase 2Fe-2S subunit; Provisional


Pssm-ID: 236910 [Multi-domain]  Cd Length: 217  Bit Score: 257.01  E-value: 4.47e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   5 PPASVPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEG 84
Cdd:PRK11433   46 APEISPVTLKVNGKTEQLEVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEG 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  85 LGSPDALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGWPSHVSADLTDASGAdmsSDEELRERMSGNLCRCGAY 164
Cdd:PRK11433  126 LGSPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL---TADEIRERMSGNICRCGAY 202

                         170
                  ....*....|
gi 2581403171 165 PNMIAAIREA 174
Cdd:PRK11433  203 SNILEAIEDV 212
CutS COG2080
Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and ...
 12-179 4.43e-84

Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441683 [Multi-domain]  Cd Length: 155  Bit Score: 244.62  E-value: 4.43e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  12 SFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLGSPDAL 91
Cdd:COG2080     5 TLTVNGKPVEVDVDPDTPLLDVLRDDLGLTGTKFGCGHGQCGACTVLVDGKAVRSCLTLAVQADGKEITTIEGLAEDGEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  92 SAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGwpshvsadltdasgadmsSDEELRERMSGNLCRCGAYPNMIAAI 171
Cdd:COG2080    85 HPLQQAFIEHGALQCGYCTPGMIMAAVALLDENPNP------------------TEEEIREALSGNLCRCTGYVRIVRAV 146


                  ....*...
gi 2581403171 172 REAMQVAR 179
Cdd:COG2080   147 KRAAAALR 154
glyceraldDH_gamma NF041020
glyceraldehyde dehydrogenase subunit gamma;
1-176 1.76e-49

glyceraldehyde dehydrogenase subunit gamma;


Pssm-ID: 468949 [Multi-domain]  Cd Length: 162  Bit Score: 157.27  E-value: 1.76e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   1 MSQNPPASVPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQIT 80
Cdd:NF041020    1 MVVEPGEKVKIRVKVNGVWYEAEVEPRKLLVHFLRDDLGFTGTHVGCDTSTCGACTVIMNGKSVKSCTVLAVQADGAEIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  81 TVEGLGSPDALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKgwpshvsadltdasgadmSSDEELRERMSGNLCR 160
Cdd:NF041020   81 TIEGLSKDGKLHPIQEAFWENHALQCGYCTPGMIMQAYFLLKENPN------------------PTEEEIRDGIHGNLCR 142

                         170
                  ....*....|....*.
gi 2581403171 161 CGAYPNMIAAIREAMQ 176
Cdd:NF041020  143 CTGYQNIVKAVKEASQ 158
pucE TIGR03198
xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the ...
 9-174 4.46e-40

xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.


Pssm-ID: 132242 [Multi-domain]  Cd Length: 151  Bit Score: 133.05  E-value: 4.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   9 VPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLgSP 88
Cdd:TIGR03198   2 EQFRFTVNGQAWEVAAVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDGKLANACLTMAYQADGHEITTIEGI-AE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  89 DALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKgwpshvsadltdasgadmSSDEELRERMSGNLCRCGAYPNMI 168
Cdd:TIGR03198  81 NELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQ------------------PSDEDMEEGLSGNLCRCTGYGGII 142


                  ....*.
gi 2581403171 169 AAIREA 174
Cdd:TIGR03198 143 RSACRI 148
Fer2_2 pfam01799
[2Fe-2S] binding domain;
81-171 1.45e-30

[2Fe-2S] binding domain;


Pssm-ID: 460336 [Multi-domain]  Cd Length: 73  Bit Score: 105.98  E-value: 1.45e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  81 TVEGLGSPDALsAVQGAFLAHDGFQCGYCTPGQICSATAMIEElakgwpshvsadltdasGADMSSDEELRERMSGNLCR 160
Cdd:pfam01799   1 TIEGLAESGGE-PVQQAFAEAGAVQCGYCTPGMIMSAYALLER-----------------NPPPPTEAEIREALSGNLCR 62

                          90
                  ....*....|.
gi 2581403171 161 CGAYPNMIAAI 171
Cdd:pfam01799  63 CTGYRRIVDAV 73
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
 25-80 1.05e-04

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 39.30  E-value: 1.05e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2581403171  25 DPRRSLLDFLRhDLGLfGTKKGCDHGQCGACTVIVD------------------GRRINSCLTLAvmQDGCQIT 80
Cdd:cd00207    15 PEGETLLDAAR-EAGI-DIPYSCRAGACGTCKVEVVegevdqsdpslldeeeaeGGYVLACQTRV--TDGLVIE 84
 
Name Accession Description Interval E-value
PRK11433 PRK11433
aldehyde oxidoreductase 2Fe-2S subunit; Provisional
 5-174 4.47e-88

aldehyde oxidoreductase 2Fe-2S subunit; Provisional


Pssm-ID: 236910 [Multi-domain]  Cd Length: 217  Bit Score: 257.01  E-value: 4.47e-88
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   5 PPASVPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEG 84
Cdd:PRK11433   46 APEISPVTLKVNGKTEQLEVDTRTTLLDALREHLHLTGTKKGCDHGQCGACTVLVNGRRLNACLTLAVMHQGAEITTIEG 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  85 LGSPDALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGWPSHVSADLTDASGAdmsSDEELRERMSGNLCRCGAY 164
Cdd:PRK11433  126 LGSPDNLHPMQAAFVKHDGFQCGYCTPGQICSSVAVLKEIKDGIPSHVTVDLTAAPEL---TADEIRERMSGNICRCGAY 202

                         170
                  ....*....|
gi 2581403171 165 PNMIAAIREA 174
Cdd:PRK11433  203 SNILEAIEDV 212
CutS COG2080
Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and ...
 12-179 4.43e-84

Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family [Energy production and conversion]; Aldehyde, CO, or xanthine dehydrogenase, Fe-S subunit, CoxS/CutS family is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441683 [Multi-domain]  Cd Length: 155  Bit Score: 244.62  E-value: 4.43e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  12 SFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLGSPDAL 91
Cdd:COG2080     5 TLTVNGKPVEVDVDPDTPLLDVLRDDLGLTGTKFGCGHGQCGACTVLVDGKAVRSCLTLAVQADGKEITTIEGLAEDGEL 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  92 SAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGwpshvsadltdasgadmsSDEELRERMSGNLCRCGAYPNMIAAI 171
Cdd:COG2080    85 HPLQQAFIEHGALQCGYCTPGMIMAAVALLDENPNP------------------TEEEIREALSGNLCRCTGYVRIVRAV 146


                  ....*...
gi 2581403171 172 REAMQVAR 179
Cdd:COG2080   147 KRAAAALR 154
glyceraldDH_gamma NF041020
glyceraldehyde dehydrogenase subunit gamma;
1-176 1.76e-49

glyceraldehyde dehydrogenase subunit gamma;


Pssm-ID: 468949 [Multi-domain]  Cd Length: 162  Bit Score: 157.27  E-value: 1.76e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   1 MSQNPPASVPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQIT 80
Cdd:NF041020    1 MVVEPGEKVKIRVKVNGVWYEAEVEPRKLLVHFLRDDLGFTGTHVGCDTSTCGACTVIMNGKSVKSCTVLAVQADGAEIT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  81 TVEGLGSPDALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKgwpshvsadltdasgadmSSDEELRERMSGNLCR 160
Cdd:NF041020   81 TIEGLSKDGKLHPIQEAFWENHALQCGYCTPGMIMQAYFLLKENPN------------------PTEEEIRDGIHGNLCR 142

                         170
                  ....*....|....*.
gi 2581403171 161 CGAYPNMIAAIREAMQ 176
Cdd:NF041020  143 CTGYQNIVKAVKEASQ 158
XdhA COG4630
Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and ...
 12-176 8.89e-44

Xanthine dehydrogenase, Fe-S cluster and FAD-binding subunit XdhA [Nucleotide transport and metabolism];


Pssm-ID: 443668 [Multi-domain]  Cd Length: 476  Bit Score: 151.06  E-value: 8.89e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  12 SFTVNGQPCRHIG-DPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIV----DGRR----INSCLTLAVMQDGCQITTV 82
Cdd:COG4630     2 RFLLNGELVELSDvPPTTTLLDWLREDRGLTGTKEGCAEGDCGACTVVVgeldDGGLryraVNACILFLPQLDGKALVTV 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  83 EGLGSPD-ALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEElakgwpshvsadltdasgADMSSDEELRERMSGNLCRC 161
Cdd:COG4630    82 EGLAGPDgALHPVQQAMVDHHGSQCGFCTPGFVMSLFALYER------------------GPAPDRADIEDALSGNLCRC 143

                         170
                  ....*....|....*
gi 2581403171 162 GAYpnmiAAIREAMQ 176
Cdd:COG4630   144 TGY----RPIIDAAR 154
pucE TIGR03198
xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the ...
 9-174 4.46e-40

xanthine dehydrogenase E subunit; This gene has been characterized in B. subtilis as the Iron-sulfur cluster binding-subunit of xanthine dehydrogenase (pucE), acting in conjunction with pucC, the FAD-binding subunit and pucD, the molybdopterin binding subunit. The more common XDH complex (GenProp0640) includes the xdhA gene as the Fe-S cluster binding component.


Pssm-ID: 132242 [Multi-domain]  Cd Length: 151  Bit Score: 133.05  E-value: 4.46e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   9 VPASFTVNGQPCRHIGDPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLgSP 88
Cdd:TIGR03198   2 EQFRFTVNGQAWEVAAVPTTRLSDLLRKELQLTGTKVSCGIGRCGACSVLIDGKLANACLTMAYQADGHEITTIEGI-AE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  89 DALSAVQGAFLAHDGFQCGYCTPGQICSATAMIEELAKgwpshvsadltdasgadmSSDEELRERMSGNLCRCGAYPNMI 168
Cdd:TIGR03198  81 NELDPCQTAFLEEGGFQCGYCTPGMVVALKALFRETPQ------------------PSDEDMEEGLSGNLCRCTGYGGII 142


                  ....*.
gi 2581403171 169 AAIREA 174
Cdd:TIGR03198 143 RSACRI 148
xanthine_xdhA TIGR02963
xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit ...
 12-178 2.31e-36

xanthine dehydrogenase, small subunit; Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other]


Pssm-ID: 274365 [Multi-domain]  Cd Length: 467  Bit Score: 130.86  E-value: 2.31e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  12 SFTVNGQPCRHIG-DPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIV----DGRRI-----NSCLTLAVMQDGCQITT 81
Cdd:TIGR02963   2 RFFLNGETVTLSDvDPTRTLLDYLREDAGLTGTKEGCAEGDCGACTVVVgelvDGGKLryrsvNACIQFLPSLDGKAVVT 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  82 VEGLGSPD-ALSAVQGAFLAHDGFQCGYCTPGQICSATAMieelakgWPSHVSADLTDASGAdmssdeelrerMSGNLCR 160
Cdd:TIGR02963  82 VEDLRQPDgRLHPVQQAMVECHGSQCGFCTPGFVMSLYAL-------YKNSPAPSRADIEDA-----------LQGNLCR 143

                         170
                  ....*....|....*...
gi 2581403171 161 CGAYpnmiAAIREAMQVA 178
Cdd:TIGR02963 144 CTGY----RPILDAAEAA 157
PRK09908 PRK09908
xanthine dehydrogenase iron sulfur-binding subunit XdhC;
14-171 2.36e-35

xanthine dehydrogenase iron sulfur-binding subunit XdhC;


Pssm-ID: 182139 [Multi-domain]  Cd Length: 159  Bit Score: 121.18  E-value: 2.36e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  14 TVNGQPCRHIGDPRRSLLDFLRHDlGLFGTKKGCDHGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLGSPDALSA 93
Cdd:PRK09908   12 TINGMPFQLHAAPGTPLSELLREQ-GLLSVKQGCCVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSH 90

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2581403171  94 VQGAFLAHDGFQCGYCTPGQICSATAMIEELAKGWPSHvsadltdasgadmssdEELRERMSGNLCRCGAYPNMIAAI 171
Cdd:PRK09908   91 VQQAYAKSGAVQCGFCTPGLIMATTAMLAKPREKPLTI----------------TEIRRGLAGNLCRCTGYQMIVNTV 152
Fer2_2 pfam01799
[2Fe-2S] binding domain;
81-171 1.45e-30

[2Fe-2S] binding domain;


Pssm-ID: 460336 [Multi-domain]  Cd Length: 73  Bit Score: 105.98  E-value: 1.45e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  81 TVEGLGSPDALsAVQGAFLAHDGFQCGYCTPGQICSATAMIEElakgwpshvsadltdasGADMSSDEELRERMSGNLCR 160
Cdd:pfam01799   1 TIEGLAESGGE-PVQQAFAEAGAVQCGYCTPGMIMSAYALLER-----------------NPPPPTEAEIREALSGNLCR 62

                          90
                  ....*....|.
gi 2581403171 161 CGAYPNMIAAI 171
Cdd:pfam01799  63 CTGYRRIVDAV 73
PLN02906 PLN02906
xanthine dehydrogenase
 29-172 2.54e-28

xanthine dehydrogenase


Pssm-ID: 215491 [Multi-domain]  Cd Length: 1319  Bit Score: 110.17  E-value: 2.54e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   29 SLLDFLRhDLGLFGTKKGCDHGQCGACTVIVDG----------RRINSCLTLAVMQDGCQITTVEGLGS-PDALSAVQGA 97
Cdd:PLN02906     3 TLLEYLR-DLGLTGTKLGCGEGGCGACTVMVSHydrktgkcvhYAVNACLAPLYSVEGMHVITVEGIGNrRDGLHPVQEA 81

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2581403171   98 FLAHDGFQCGYCTPGQICSATAMIeelakgwpshvsadltdASGADMSSDEELRERMSGNLCRCGAYPNMIAAIR 172
Cdd:PLN02906    82 LASMHGSQCGFCTPGFIMSMYALL-----------------RSSKTPPTEEQIEECLAGNLCRCTGYRPILDAFR 139
PLN00192 PLN00192
aldehyde oxidase
 13-164 3.46e-28

aldehyde oxidase


Pssm-ID: 215096 [Multi-domain]  Cd Length: 1344  Bit Score: 109.81  E-value: 3.46e-28
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   13 FTVNGQPCRHIG-DPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVI----------VDGRRINSCLTLAVMQDGCQITT 81
Cdd:PLN00192     8 FAVNGERFELSSvDPSTTLLEFLRTQTPFKSVKLGCGEGGCGACVVLlskydpvldqVEDFTVSSCLTLLCSVNGCSITT 87

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   82 VEGLG-SPDALSAVQGAFLAHDGFQCGYCTPG---QICSATAMIEELAKGWPSHVSADLTdASGADMSsdeelrerMSGN 157
Cdd:PLN00192    88 SEGLGnSKDGFHPIHKRFAGFHASQCGFCTPGmciSLFSALVNADKTDRPEPPSGFSKLT-VVEAEKA--------VSGN 158


                   ....*..
gi 2581403171  158 LCRCGAY 164
Cdd:PLN00192   159 LCRCTGY 165
mam_aldehyde_ox TIGR02969
aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, ...
 13-172 1.06e-24

aldehyde oxidase; Members of this family are mammalian aldehyde oxidase (EC 1.2.3.1) isozymes, closely related to xanthine dehydrogenase/oxidase.


Pssm-ID: 132014 [Multi-domain]  Cd Length: 1330  Bit Score: 100.08  E-value: 1.06e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   13 FTVNGQPCRHIG-DPRRSLLDFLRHDLGLFGTKKGCDHGQCGACTVIVD-----GRRI-----NSCLTLAVMQDGCQITT 81
Cdd:TIGR02969    5 FYVNGRKVVEKNvDPETMLLPYLRKKLRLTGTKYGCGGGGCGACTVMISrynpsTKSIrhhpvNACLTPICSLYGAAVTT 84

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171   82 VEGLGSPDA-LSAVQGAFLAHDGFQCGYCTPGQICSATAMIeelaKGWPSHVSADLTDASGadmssdeelrermsGNLCR 160
Cdd:TIGR02969   85 VEGIGSTRTrLHPVQERIAKCHGTQCGFCTPGMVMSMYALL----RNHPEPTLDQLTDALG--------------GNLCR 146

                          170
                   ....*....|..
gi 2581403171  161 CGAYPNMIAAIR 172
Cdd:TIGR02969  147 CTGYRPIIDACK 158
PRK09800 PRK09800
putative hypoxanthine oxidase; Provisional
 12-139 3.33e-09

putative hypoxanthine oxidase; Provisional


Pssm-ID: 182084 [Multi-domain]  Cd Length: 956  Bit Score: 55.22  E-value: 3.33e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2581403171  12 SFTVNGQPCR---HIGDPRRSLLdflrHDLGLFGTKKGCD-HGQCGACTVIVDGRRINSCLTLAVMQDGCQITTVEGLGS 87
Cdd:PRK09800    4 HFTLNGAPQEltvNPGENVQKLL----FNMGMHSVRNSDDgFGFAGSDAIIFNGNIVNASLLIAAQLEKADIRTAESLGK 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2581403171  88 PDALSAVQGAFLAHDGFQCGYCTPgqicSATAMIEELAKGWPSHVSADLTDA 139
Cdd:PRK09800   80 WNELSLVQQAMVDVGVVQSGYNDP----AAALIITDLLDRIAAPTREEIDDA 127
fer2 cd00207
2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in ...
 25-80 1.05e-04

2Fe-2S iron-sulfur cluster binding domain. Iron-sulfur proteins play an important role in electron transfer processes and in various enzymatic reactions. The family includes plant and algal ferredoxins, which act as electron carriers in photosynthesis and ferredoxins, which participate in redox chains (from bacteria to mammals). Fold is ismilar to thioredoxin.


Pssm-ID: 238126 [Multi-domain]  Cd Length: 84  Bit Score: 39.30  E-value: 1.05e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2581403171  25 DPRRSLLDFLRhDLGLfGTKKGCDHGQCGACTVIVD------------------GRRINSCLTLAvmQDGCQIT 80
Cdd:cd00207    15 PEGETLLDAAR-EAGI-DIPYSCRAGACGTCKVEVVegevdqsdpslldeeeaeGGYVLACQTRV--TDGLVIE 84
Fer2 pfam00111
2Fe-2S iron-sulfur cluster binding domain;
13-60 1.28e-03

2Fe-2S iron-sulfur cluster binding domain;


Pssm-ID: 395061 [Multi-domain]  Cd Length: 77  Bit Score: 35.96  E-value: 1.28e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2581403171  13 FTVNGQPCR-HIGDPRRSLLDFLRHdlGLFGTKKGCDHGQCGACTVIVD 60
Cdd:pfam00111   1 VTINGKGVTiEVPDGETTLLDAAEE--AGIDIPYSCRGGGCGTCAVKVL 47
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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