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Conserved domains on  [gi|2582490333|ref|WP_311514852|]
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ABC transporter substrate-binding protein [Oligella urethralis]

Protein Classification

siderophore ABC transporter substrate-binding protein( domain architecture ID 11468490)

siderophore ABC transporter substrate-binding protein such as Bacillus subtilis petrobactin-binding protein YclQ, which is part of the ABC transporter complex YclNOPQ involved in uptake of ferric-petrobactin, a photoreactive 3,4-catecholate siderophore, and which selectively binds iron-free and ferric petrobactin and the petrobactin precursor 3,4-dihydroxybenzoic acid

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CeuA COG4607
ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and ...
1-303 1.13e-85

ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism];


:

Pssm-ID: 443657 [Multi-domain]  Cd Length: 310  Bit Score: 259.73  E-value: 1.13e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   1 MKKIFQ-IMTLTATLAIAAPSLA------------FELEHTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSNY 67
Cdd:COG4607     1 MKKTLLaALALAAALALAACGSSsaaaasaaaaetVTVEHALGTVEVPKNPKRVVVFDNGALDTLDALGVEVAGVPKGLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  68 KDELAKFA--EAPKVGTLFEPDYEALKALKPDLIFAGGRSASAIPELEKIAPVANLTNRNPEFLADFRTNTLRLAAAFDK 145
Cdd:COG4607    81 PDYLSKYAddKYANVGTLFEPDLEAIAALKPDLIIIGGRSAKKYDELSKIAPTIDLTVDGEDYLESLKRNTETLGEIFGK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 146 TKKAEEGLSNIDKDIADLQKLNAGK-TGAFLFVMNGNIIPHVVGDRFGFVYELTGLesvlpaKTAEELAAPATRPAPDSP 224
Cdd:COG4607   161 EDEAEELVADLDAKIAALKAAAAGKgTALIVLTNGGKISAYGPGSRFGPIHDVLGF------KPADEDIEASTHGQAISF 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2582490333 225 EakaaaakraqqikAIAKADPDWLIVFDRAAINGGENAGEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYVITGGLNNLK 303
Cdd:COG4607   235 E-------------FIAEANPDWLFVIDRDAAIGGEGPAAKQVLDNELVKQTTAWKNGQIVYLDPDAWYLAGGGIQSLT 300
 
Name Accession Description Interval E-value
CeuA COG4607
ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and ...
1-303 1.13e-85

ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 443657 [Multi-domain]  Cd Length: 310  Bit Score: 259.73  E-value: 1.13e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   1 MKKIFQ-IMTLTATLAIAAPSLA------------FELEHTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSNY 67
Cdd:COG4607     1 MKKTLLaALALAAALALAACGSSsaaaasaaaaetVTVEHALGTVEVPKNPKRVVVFDNGALDTLDALGVEVAGVPKGLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  68 KDELAKFA--EAPKVGTLFEPDYEALKALKPDLIFAGGRSASAIPELEKIAPVANLTNRNPEFLADFRTNTLRLAAAFDK 145
Cdd:COG4607    81 PDYLSKYAddKYANVGTLFEPDLEAIAALKPDLIIIGGRSAKKYDELSKIAPTIDLTVDGEDYLESLKRNTETLGEIFGK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 146 TKKAEEGLSNIDKDIADLQKLNAGK-TGAFLFVMNGNIIPHVVGDRFGFVYELTGLesvlpaKTAEELAAPATRPAPDSP 224
Cdd:COG4607   161 EDEAEELVADLDAKIAALKAAAAGKgTALIVLTNGGKISAYGPGSRFGPIHDVLGF------KPADEDIEASTHGQAISF 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2582490333 225 EakaaaakraqqikAIAKADPDWLIVFDRAAINGGENAGEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYVITGGLNNLK 303
Cdd:COG4607   235 E-------------FIAEANPDWLFVIDRDAAIGGEGPAAKQVLDNELVKQTTAWKNGQIVYLDPDAWYLAGGGIQSLT 300
FatB cd01140
Siderophore binding protein FatB. These proteins have been shown to function as ABC-type ...
27-303 1.12e-62

Siderophore binding protein FatB. These proteins have been shown to function as ABC-type initial receptors in the siderophore-mediated iron uptake in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.


Pssm-ID: 238560 [Multi-domain]  Cd Length: 270  Bit Score: 199.79  E-value: 1.12e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  27 HTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSN---YKDELAKFAEAPKVGTLFEPDYEALKALKPDLIFAGG 103
Cdd:cd01140     1 HALGETKVPKNPEKVVVFDVGALDTLDALGVKVVGVPKSStlpEYLKKYKDDKYANVGTLFEPDLEAIAALKPDLIIIGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 104 RSASAIPELEKIAPVANLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGK-TGAFLFVMNGNI 182
Cdd:cd01140    81 RLAEKYDELKKIAPTIDLGADLKNYLESVKQNIETLGKIFGKEEEAKELVAEIDASIAEAKSAAKGKkKALVVLVNGGKL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 183 IPHVVGDRFGFVYELTGLESVLpaktaeELAAPATRPAPDSPEakaaaakraqqikAIAKADPDWLIVFDRAAINGGENA 262
Cdd:cd01140   161 SAFGPGSRFGWLHDLLGFEPAD------ENIKASSHGQPVSFE-------------YILEANPDWLFVIDRGAAIGAEGS 221
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2582490333 263 GEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYVITGGLNNLK 303
Cdd:cd01140   222 SAKEVLDNDLVKNTTAWKNGKVIYLDPDLWYLSGGGLESLK 262
Peripla_BP_2 pfam01497
Periplasmic binding protein; This is sensor domain found in bacterial periplasmic binding ...
42-289 2.19e-23

Periplasmic binding protein; This is sensor domain found in bacterial periplasmic binding proteins, several of which are involved in iron and cobalamin transport. Among its ligands are siderophores bacillibactin, enterobactin and iron(III)-hydroxamates (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1 https://doi.org/10.1093/femsre/fuab043).


Pssm-ID: 426291 [Multi-domain]  Cd Length: 233  Bit Score: 95.90  E-value: 2.19e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  42 VSYDLSILDSLNALGIEA--VGVPKSNYKDELAKFAEA-PKVGTLFEPDYEALKALKPDLIFAGGR--SASAIPELEKIA 116
Cdd:pfam01497   1 AALSPAYTEILYALGATDsiVGVDAYTRDPLKADAVAAiVKVGAYGEINVERLAALKPDLVILSTGylTDEAEELLSLII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 117 PVanLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTG--AFLFVMNGNIIPHVVGD--RFG 192
Cdd:pfam01497  81 PT--VIFESSSTGESLKEQIKQLGELLGLEDEAEELVAEIDSALAAAKKAVPSLTRkpVLVFGGADGGGYVVAGSntYIG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 193 FVYELTGLESVLPAKTAEElAAPAtrpapdSPEakaaaakraqqikAIAKADPDWLIVFDRAAINggeNAGEKTLAEHPD 272
Cdd:pfam01497 159 DLLRILGIENIAAELSGSE-YAPI------SFE-------------AILSSNPDVIIVSGRDSFT---KTGPEFVAANPL 215
                         250
                  ....*....|....*..
gi 2582490333 273 LSQTSAFKNGRVVYVDP 289
Cdd:pfam01497 216 WAGLPAVKNGRVYTLPS 232
fecB PRK11411
iron-dicitrate transporter substrate-binding subunit; Provisional
3-292 1.08e-17

iron-dicitrate transporter substrate-binding subunit; Provisional


Pssm-ID: 183123 [Multi-domain]  Cd Length: 303  Bit Score: 81.64  E-value: 1.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   3 KIFQIMTLTATLAIAAPSLAFEL----EHTTGTIngDKTPERIVSYDLSILDSLNALGIEAVGVPKSNYKDE-LAKFAEA 77
Cdd:PRK11411    2 LAFIRLLFAGLLLLSGSSHAFAVtvqdEQGTFTL--EKTPQRIVVLELSFVDALAAVGVSPVGVADDNDAKRiLPEVRAH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  78 PK----VGTLFEPDYEALKALKPDLIFA-GGRSASAIPELEKIAPVANLTNRNPEFLADFRTnTLRLAAAFDKTKKAEEG 152
Cdd:PRK11411   80 LKpwqsVGTRSQPSLEAIAALKPDLIIAdSSRHAGVYIALQKIAPTLLLKSRNETYQENLQS-AAIIGEVLGKKREMQAR 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 153 LSNIDKDIADL-QKLNAGKTGAFLFVMNGNIIPHVVGDRFGFVYELTGLESVLPAKTAEELaapatrpAPDSPEakaaaa 231
Cdd:PRK11411  159 IEQHKERMAQFaSQLPKGTRVAFGTSREQQFNLHSPESYTGSVLAALGLNVPKAPMNGAAM-------PSISLE------ 225
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2582490333 232 kraqQIKAIakaDPDWLIV--FDRAAInggenagEKTLAEHPDLSQTSAFKNGRVVYVDPVRW 292
Cdd:PRK11411  226 ----QLLAL---NPDWLLVahYRQESI-------VKRWQQDPLWQMLTAAKKQQVASVDSNTW 274
 
Name Accession Description Interval E-value
CeuA COG4607
ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and ...
1-303 1.13e-85

ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 443657 [Multi-domain]  Cd Length: 310  Bit Score: 259.73  E-value: 1.13e-85
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   1 MKKIFQ-IMTLTATLAIAAPSLA------------FELEHTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSNY 67
Cdd:COG4607     1 MKKTLLaALALAAALALAACGSSsaaaasaaaaetVTVEHALGTVEVPKNPKRVVVFDNGALDTLDALGVEVAGVPKGLL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  68 KDELAKFA--EAPKVGTLFEPDYEALKALKPDLIFAGGRSASAIPELEKIAPVANLTNRNPEFLADFRTNTLRLAAAFDK 145
Cdd:COG4607    81 PDYLSKYAddKYANVGTLFEPDLEAIAALKPDLIIIGGRSAKKYDELSKIAPTIDLTVDGEDYLESLKRNTETLGEIFGK 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 146 TKKAEEGLSNIDKDIADLQKLNAGK-TGAFLFVMNGNIIPHVVGDRFGFVYELTGLesvlpaKTAEELAAPATRPAPDSP 224
Cdd:COG4607   161 EDEAEELVADLDAKIAALKAAAAGKgTALIVLTNGGKISAYGPGSRFGPIHDVLGF------KPADEDIEASTHGQAISF 234
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2582490333 225 EakaaaakraqqikAIAKADPDWLIVFDRAAINGGENAGEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYVITGGLNNLK 303
Cdd:COG4607   235 E-------------FIAEANPDWLFVIDRDAAIGGEGPAAKQVLDNELVKQTTAWKNGQIVYLDPDAWYLAGGGIQSLT 300
FatB cd01140
Siderophore binding protein FatB. These proteins have been shown to function as ABC-type ...
27-303 1.12e-62

Siderophore binding protein FatB. These proteins have been shown to function as ABC-type initial receptors in the siderophore-mediated iron uptake in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.


Pssm-ID: 238560 [Multi-domain]  Cd Length: 270  Bit Score: 199.79  E-value: 1.12e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  27 HTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSN---YKDELAKFAEAPKVGTLFEPDYEALKALKPDLIFAGG 103
Cdd:cd01140     1 HALGETKVPKNPEKVVVFDVGALDTLDALGVKVVGVPKSStlpEYLKKYKDDKYANVGTLFEPDLEAIAALKPDLIIIGG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 104 RSASAIPELEKIAPVANLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGK-TGAFLFVMNGNI 182
Cdd:cd01140    81 RLAEKYDELKKIAPTIDLGADLKNYLESVKQNIETLGKIFGKEEEAKELVAEIDASIAEAKSAAKGKkKALVVLVNGGKL 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 183 IPHVVGDRFGFVYELTGLESVLpaktaeELAAPATRPAPDSPEakaaaakraqqikAIAKADPDWLIVFDRAAINGGENA 262
Cdd:cd01140   161 SAFGPGSRFGWLHDLLGFEPAD------ENIKASSHGQPVSFE-------------YILEANPDWLFVIDRGAAIGAEGS 221
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|.
gi 2582490333 263 GEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYVITGGLNNLK 303
Cdd:cd01140   222 SAKEVLDNDLVKNTTAWKNGKVIYLDPDLWYLSGGGLESLK 262
FepB COG0614
ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and ...
40-305 1.60e-34

ABC-type Fe3+-hydroxamate transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 440379 [Multi-domain]  Cd Length: 264  Bit Score: 126.27  E-value: 1.60e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  40 RIVSYDLSILDSLNALGIEA--VGVPKSNYKDELA-KFAEAPKVGTLFEPDYEALKALKPDLIFAG--GRSASAIPELEK 114
Cdd:COG0614     2 RIVSLSPSATELLLALGAGDrlVGVSDWGYCDYPElELKDLPVVGGTGEPNLEAILALKPDLVLASssGNDEEDYEQLEK 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 115 I-APVANLtnrNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTG---AFLFVMNGNIIpHVVGDR 190
Cdd:COG0614    82 IgIPVVVL---DPRSLEDLYESIRLLGELLGREERAEALIAEYEARLAAVRARLAGAEErptVLYEIWSGDPL-YTAGGG 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 191 --FGFVYELTGLESVlpaktaeelAAPATRPAPD-SPEakaaaakraqqikAIAKADPDWLIVFDRAAINGGENAGEKTL 267
Cdd:COG0614   158 sfIGELLELAGGRNV---------AADLGGGYPEvSLE-------------QVLALDPDVIILSGGGYDAETAEEALEAL 215
                         250       260       270
                  ....*....|....*....|....*....|....*...
gi 2582490333 268 AEHPDLSQTSAFKNGRVVYVDPVRWYviTGGLNNLKFL 305
Cdd:COG0614   216 LADPGWQSLPAVKNGRVYVVPGDLLS--RPGPRLLLAL 251
FhuD cd01146
Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial ...
36-293 2.19e-31

Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.


Pssm-ID: 238566 [Multi-domain]  Cd Length: 256  Bit Score: 117.77  E-value: 2.19e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  36 KTPERIVSYDLSILDSLNALGIEAVGVPKSN-----YKDELAKFAEAPKVGTLFEPDYEALKALKPDLIFA-GGRSASAI 109
Cdd:cd01146     1 AKPQRIVALDWGALETLLALGVKPVGVADTAgykpwIPEPALPLEGVVDVGTRGQPNLEAIAALKPDLILGsASRHDEIY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 110 PELEKIAPVANLTNRNPefLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADL-QKL--NAGKTGAFLFVM-NGNIIPH 185
Cdd:cd01146    81 DQLSQIAPTVLLDSSPW--LAEWKENLRLIAKALGKEEEAEKLLAEYDQRLAELrQKLpdKGPKPVSVVRFSdAGSIRLY 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 186 VVGDRFGFVYELTGLEsvLPAKTAEELAAPAtrpAPDSPEakaaaakraqqikAIAKADPDWLIVFDRAAinggeNAGEK 265
Cdd:cd01146   159 GPNSFAGSVLEDLGLQ--NPWAQETTNDSGF---ATISLE-------------RLAKADADVLFVFTYED-----EELAQ 215
                         250       260
                  ....*....|....*....|....*...
gi 2582490333 266 TLAEHPDLSQTSAFKNGRVVYVDPVRWY 293
Cdd:cd01146   216 ALQANPLWQNLPAVKNGRVYVVDDVWWF 243
FecB COG4594
ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and ...
1-292 7.00e-29

ABC-type Fe3+-citrate transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 443650 [Multi-domain]  Cd Length: 316  Bit Score: 112.71  E-value: 7.00e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   1 MKKI-FQIMTLTATLAIAAPSL-------------AFELEHTTGTINGDKTPERIVSYDLSILDSLNALGIEAVGVPKSN 66
Cdd:COG4594     1 MKKLlLLLILLLALLLLAACGSsssdsssseaaagARTVKHAMGETTIPGTPKRVVVLEWSFADALLALGVTPVGIADDN 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  67 YKD----ELAKFAEAPK-VGTLFEPDYEALKALKPDLIFA-GGRSASAIPELEKIAPVANLTNRN---PEFLADFRTntl 137
Cdd:COG4594    81 DYDrwvpYLRDLIKGVTsVGTRSQPNLEAIAALKPDLIIAdKSRHEAIYDQLSKIAPTVLFKSRNgdyQENLESFKT--- 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 138 rLAAAFDKTKKAEEGLSNIDKDIAD----LQKLNAGKTGAFLFVMNGNIIPHVVGDRFGFVYELTGLESVLPAKTAEELA 213
Cdd:COG4594   158 -IAKALGKEEEAEAVLADHDQRIAEakakLAAADKGKKVAVGQFRADGLRLYTPNSFAGSVLAALGFENPPKQSKDNGYG 236
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2582490333 214 APATrpapdSPEakaaaakraqqikAIAKADPDWLIVFdraaiNGGENAGEKTLAEHPDLSQTSAFKNGRVVYVDPVRW 292
Cdd:COG4594   237 YSEV-----SLE-------------QLPALDPDVLFIA-----TYDDPSILKEWKNNPLWKNLKAVKNGRVYEVDGDLW 292
Peripla_BP_2 pfam01497
Periplasmic binding protein; This is sensor domain found in bacterial periplasmic binding ...
42-289 2.19e-23

Periplasmic binding protein; This is sensor domain found in bacterial periplasmic binding proteins, several of which are involved in iron and cobalamin transport. Among its ligands are siderophores bacillibactin, enterobactin and iron(III)-hydroxamates (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1 https://doi.org/10.1093/femsre/fuab043).


Pssm-ID: 426291 [Multi-domain]  Cd Length: 233  Bit Score: 95.90  E-value: 2.19e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  42 VSYDLSILDSLNALGIEA--VGVPKSNYKDELAKFAEA-PKVGTLFEPDYEALKALKPDLIFAGGR--SASAIPELEKIA 116
Cdd:pfam01497   1 AALSPAYTEILYALGATDsiVGVDAYTRDPLKADAVAAiVKVGAYGEINVERLAALKPDLVILSTGylTDEAEELLSLII 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 117 PVanLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTG--AFLFVMNGNIIPHVVGD--RFG 192
Cdd:pfam01497  81 PT--VIFESSSTGESLKEQIKQLGELLGLEDEAEELVAEIDSALAAAKKAVPSLTRkpVLVFGGADGGGYVVAGSntYIG 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 193 FVYELTGLESVLPAKTAEElAAPAtrpapdSPEakaaaakraqqikAIAKADPDWLIVFDRAAINggeNAGEKTLAEHPD 272
Cdd:pfam01497 159 DLLRILGIENIAAELSGSE-YAPI------SFE-------------AILSSNPDVIIVSGRDSFT---KTGPEFVAANPL 215
                         250
                  ....*....|....*..
gi 2582490333 273 LSQTSAFKNGRVVYVDP 289
Cdd:pfam01497 216 WAGLPAVKNGRVYTLPS 232
TroA-like cd00636
Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function ...
39-180 1.59e-19

Helical backbone metal receptor (TroA-like domain). These proteins have been shown to function in the ABC transport of ferric siderophores and metal ions such as Mn2+, Fe3+, Cu2+ and/or Zn2+. Their ligand binding site is formed in the interface between two globular domains linked by a single helix. Many of these proteins also possess a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence). The TroA-like proteins differ in their fold and ligand-binding mechanism from the PBPI and PBPII proteins, but are structurally similar, however, to the beta-subunit of the nitrogenase molybdenum-iron protein MoFe. Most TroA-like proteins are encoded by ABC-type operons and appear to function as periplasmic components of ABC transporters in metal ion uptake.


Pssm-ID: 238347 [Multi-domain]  Cd Length: 148  Bit Score: 83.38  E-value: 1.59e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  39 ERIVSYDLSILDSLNALGIEA--VGVPKSNYKDELAKFA--EAPKVGTLFEPDYEALKALKPDLIFAGGRSASAIPE-LE 113
Cdd:cd00636     1 KRVVALDPGATELLLALGGDDkpVGVADPSGYPPEAKALleKVPDVGHGYEPNLEKIAALKPDLIIANGSGLEAWLDkLS 80
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2582490333 114 KIA-PVANLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTGAFLFVMNG 180
Cdd:cd00636    81 KIAiPVVVVDEASELSLENIKESIRLIGKALGKEENAEELIAELDARLAELRAKLAKIPKKKVSLVVG 148
fecB PRK11411
iron-dicitrate transporter substrate-binding subunit; Provisional
3-292 1.08e-17

iron-dicitrate transporter substrate-binding subunit; Provisional


Pssm-ID: 183123 [Multi-domain]  Cd Length: 303  Bit Score: 81.64  E-value: 1.08e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   3 KIFQIMTLTATLAIAAPSLAFEL----EHTTGTIngDKTPERIVSYDLSILDSLNALGIEAVGVPKSNYKDE-LAKFAEA 77
Cdd:PRK11411    2 LAFIRLLFAGLLLLSGSSHAFAVtvqdEQGTFTL--EKTPQRIVVLELSFVDALAAVGVSPVGVADDNDAKRiLPEVRAH 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  78 PK----VGTLFEPDYEALKALKPDLIFA-GGRSASAIPELEKIAPVANLTNRNPEFLADFRTnTLRLAAAFDKTKKAEEG 152
Cdd:PRK11411   80 LKpwqsVGTRSQPSLEAIAALKPDLIIAdSSRHAGVYIALQKIAPTLLLKSRNETYQENLQS-AAIIGEVLGKKREMQAR 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 153 LSNIDKDIADL-QKLNAGKTGAFLFVMNGNIIPHVVGDRFGFVYELTGLESVLPAKTAEELaapatrpAPDSPEakaaaa 231
Cdd:PRK11411  159 IEQHKERMAQFaSQLPKGTRVAFGTSREQQFNLHSPESYTGSVLAALGLNVPKAPMNGAAM-------PSISLE------ 225
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2582490333 232 kraqQIKAIakaDPDWLIV--FDRAAInggenagEKTLAEHPDLSQTSAFKNGRVVYVDPVRW 292
Cdd:PRK11411  226 ----QLLAL---NPDWLLVahYRQESI-------VKRWQQDPLWQMLTAAKKQQVASVDSNTW 274
ChuT COG4558
ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism] ...
1-289 1.46e-17

ABC-type hemin transport system, periplasmic component [Inorganic ion transport and metabolism];


Pssm-ID: 443619 [Multi-domain]  Cd Length: 285  Bit Score: 81.01  E-value: 1.46e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   1 MKKIFQIMTLTATLAIAAPSLAFElehttgtingdKTPERIVSYDLSILDSLNALGIEA--VGVPK-SNYKDELAKfaeA 77
Cdd:COG4558     1 MKRLALALLLLALAALAAGASVAA-----------AAAERIVSLGGSVTEIVYALGAGDrlVGVDTtSTYPAAAKA---L 66
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  78 PKVGTLFEPDYEALKALKPDLIFAggrSASAIPE--LEKIA----PVANLTNRNPefLADFRTNTLRLAAAFDKTKKAEE 151
Cdd:COG4558    67 PDVGYMRQLSAEGILSLKPTLVLA---SEGAGPPevLDQLRaagvPVVVVPAAPS--LEGVLAKIRAVAAALGVPEAGEA 141
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 152 GLSNIDKDIADLQKLNAGKTGA--FLFVMN-GNIIPHVVGDRfgfvyelTGLESVLPAKTAEELAAPATRPAPDSPEaka 228
Cdd:COG4558   142 LAARLEADLAALAARVAAIGKPprVLFLLSrGGGRPMVAGRG-------TAADALIRLAGGVNAAAGFEGYKPLSAE--- 211
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2582490333 229 aaakraqqikAIAKADPDWLIVFDRaainGGENAG-EKTLAEHPDLSQTSAFKNGRVVYVDP 289
Cdd:COG4558   212 ----------ALIAAAPDVILVMTR----GLESLGgVDGLLALPGLAQTPAGKNKRIVAMDD 259
YvrC cd01143
Periplasmic binding protein YvrC. These proteins are predicted to function as initial ...
36-250 1.13e-14

Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.


Pssm-ID: 238563 [Multi-domain]  Cd Length: 195  Bit Score: 71.16  E-value: 1.13e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  36 KTPERIVSYDLSILDSLNALGIE--AVGVPK-SNYKDELAKfaeAPKVGTLFEPDYEALKALKPDLIFA-GGRSASAIPE 111
Cdd:cd01143     1 KEPERIVSLSPSITEILFALGAGdkIVGVDTySNYPKEVRK---KPKVGSYSNPNVEKIVALKPDLVIVsSSSLAELLEK 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 112 LEKIA-PVANLtnRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTGAFLFVMNGNIIPHVVGDR 190
Cdd:cd01143    78 LKDAGiPVVVL--PAASSLDEIYDQIELIGKITGAEEEAEKLVKEMKQKIDKVKDKGKTIKKSKVYIEVSLGGPYTAGKN 155
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2582490333 191 --FGFVYELTGLESVLPAKTaeelaapaTRPAPdSPEakaaaakraqqikAIAKADPDWLIV 250
Cdd:cd01143   156 tfINELIRLAGAKNIAADSG--------GWPQV-SPE-------------EILKANPDVIIL 195
FeuA cd01138
Periplasmic binding protein FeuA. These proteins have predicted to function as initial ...
36-289 5.65e-14

Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.


Pssm-ID: 238558 [Multi-domain]  Cd Length: 248  Bit Score: 70.44  E-value: 5.65e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  36 KTPERIV-SYDLSILDSLnaLGIEAVGVPKSNYKDELAKFAEAPKVGTL-FEPDYEALKALKPDLIFAGGRSASAIPELE 113
Cdd:cd01138     7 AKPKRIVaLSGETEGLAL--LGIKPVGAASIGGKNPYYKKKTLAKVVGIvDEPNLEKVLELKPDLIIVSSKQEENYEKLS 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 114 KIAPVANLTNRNpeflADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTGAF--LFVMNGNIIPHVVGDRF 191
Cdd:cd01138    85 KIAPTVPVSYNS----SDWEEQLKEIGKLLNKEDEAEKWLADYKQKAKEAKEKIKKKLGNDksVAVLRGRKQIYVFGEDG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 192 GF----VYELTGLESvlPAKTAEELAAPATrpAPDSPEakaaaakraqqikAIAKADPDWLIVFDraainggeNAGEKTL 267
Cdd:cd01138   161 RGggpiLYADLGLKA--PEKVKEIEDKPGY--AAISLE-------------VLPEFDADYIFLLF--------FTGPEAK 215
                         250       260
                  ....*....|....*....|....*
gi 2582490333 268 AEHPDLS---QTSAFKNGRVVYVDP 289
Cdd:cd01138   216 ADFESLPiwkNLPAVKNNHVYIVDA 240
TroA_d cd01141
Periplasmic binding protein TroA_d. These proteins are predicted to function as initial ...
36-166 2.32e-10

Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.


Pssm-ID: 238561 [Multi-domain]  Cd Length: 186  Bit Score: 58.97  E-value: 2.32e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  36 KTPERIVSYDLSILDSLNALGIEA--VGVPKSNYKDELAKFAEAPK--VGTLFEPDYEALKALKPDLIFAGGR--SASAI 109
Cdd:cd01141     6 VPPKRIVVLSPTHVDLLLALDKADkiVGVSASAYDLNTPAVKERIDiqVGPTGSLNVELIVALKPDLVILYGGfqAQTIL 85
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 110 PELEKIAPVANLTNRNPEFLAdfRTNTLRLAAAF---DKTKKAEEGLSNIDKDIADLQKL 166
Cdd:cd01141    86 DKLEQLGIPVLYVNEYPSPLG--RAEWIKFAAAFygvGKEDKADEAFAQIAGRYRDLAKK 143
BtuF cd01144
Cobalamin binding protein BtuF. These proteins have been shown to function as initial ...
39-289 5.02e-10

Cobalamin binding protein BtuF. These proteins have been shown to function as initial receptors in ABC transport of vitamin B12 (cobalamin) in eubacterial and some archaeal species. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).


Pssm-ID: 238564 [Multi-domain]  Cd Length: 245  Bit Score: 58.85  E-value: 5.02e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  39 ERIVSYDLSILDSLNALGIEA--VGVpkSNYKDELAKFAEAPKVGTLFEPDYEALKALKPDLI--FAGGRSASAIPELEK 114
Cdd:cd01144     1 MRIVSLAPSATELLYALGLGDqlVGV--TDYCDYPPEAKKLPRVGGFYQLDLERVLALKPDLViaWDDCNVCAVVDQLRA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 115 IAPVANLTNRN--PEFLADFRtntlRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTG--AF-------LFVMNGNII 183
Cdd:cd01144    79 AGIPVLVSEPQtlDDILADIR----RLGTLAGRPARAEELAEALRRRLAALRKQYASKPPprVFyqewidpLMTAGGDWV 154
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 184 PHVVgdrfgfvyELTGLESVLPaktaeELAAPATRPAPDSpeakaaaakraqqikaIAKADPDWLIVFDraainGGENAG 263
Cdd:cd01144   155 PELI--------ALAGGVNVFA-----DAGERSPQVSWED----------------VLAANPDVIVLSP-----CGFGFT 200
                         250       260
                  ....*....|....*....|....*.
gi 2582490333 264 EKTLAEHPDLSQTSAFKNGRVVYVDP 289
Cdd:cd01144   201 PAILRKEPAWQALPAVRNGRVYAVDG 226
HutB cd01149
Hemin binding protein HutB. These proteins have been shown to function as initial receptors ...
38-289 9.16e-10

Hemin binding protein HutB. These proteins have been shown to function as initial receptors in ABC transport of hemin and hemoproteins in many eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.


Pssm-ID: 238569 [Multi-domain]  Cd Length: 235  Bit Score: 58.05  E-value: 9.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  38 PERIVSYDLSILDSLNALGIEA--VGV-PKSNYKDELAKfaeAPKVGTLFEPDYEALKALKPDLIFA--GGRSASAIPEL 112
Cdd:cd01149     1 PERIVSLGGSVTEIVYALGAGDrlVGVdSTSTYPEAAAK---LPDVGYMRQLSAEGVLSLKPTLVIAsdEAGPPEALDQL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 113 EKiAPVANLTNRNPEFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNA--GKTGAFLFVM-NGNIIPHVVGd 189
Cdd:cd01149    78 RA-AGVPVVTVPSTPTLDGLLTKIRQVAQALGVPEKGEALAQEVRQRLAALRKTVAahKKPPRVLFLLsHGGGAAMAAG- 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 190 rfgfvyELTGLESVLPAKTAEELAAPATRPAPDSPEakaaaakraqqikAIAKADPDWLIVFDRAAINGGENAGektLAE 269
Cdd:cd01149   156 ------RNTAADAIIALAGAVNAAAGFRGYKPLSAE-------------ALIAAQPDVILVMSRGLDAVGGVDG---LLK 213
                         250       260
                  ....*....|....*....|
gi 2582490333 270 HPDLSQTSAFKNGRVVYVDP 289
Cdd:cd01149   214 LPGLAQTPAGRNKRILAMDD 233
HemV-2 cd01147
Metal binding protein HemV-2. These proteins are predicted to function as initial receptors ...
39-290 1.92e-09

Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).


Pssm-ID: 238567 [Multi-domain]  Cd Length: 262  Bit Score: 57.34  E-value: 1.92e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  39 ERIVSYDLSILDSLNALGI--EAVGVPKSNYKDELAKF-------AEAPKVGTLF---EPDYEALKALKPDLIFA-GGRS 105
Cdd:cd01147     6 ERVVAAGPGALRLLYALAApdKIVGVDDAEKSDEGRPYflaspelKDLPVIGRGGrgnTPNYEKIAALKPDVVIDvGSDD 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 106 ASAIPE-LEKIA--PVANLTNRNpeFLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQK----LNAGKTGAFLFVM 178
Cdd:cd01147    86 PTSIADdLQKKTgiPVVVLDGGD--SLEDTPEQIRLLGKVLGKEERAEELISFIESILADVEErtkdIPDEEKPTVYFGR 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 179 NGNIIPHVV---GDRFGFVYELTGLESVLPAKTAEELAAPatrpapdSPEAkaaaakraqqikaIAKADPDWLIVFDraa 255
Cdd:cd01147   164 IGTKGAAGLesgLAGSIEVFELAGGINVADGLGGGGLKEV-------SPEQ-------------ILLWNPDVIFLDT--- 220
                         250       260       270
                  ....*....|....*....|....*....|....*
gi 2582490333 256 iNGGENAGEKTLAEHPDLSQTSAFKNGRvVYVDPV 290
Cdd:cd01147   221 -GSFYLSLEGYAKNRPFWQSLKAVKNGR-VYLLPA 253
TroA_a cd01148
Metal binding protein TroA_a. These proteins are predicted to function as initial receptors ...
35-300 1.73e-08

Metal binding protein TroA_a. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.


Pssm-ID: 238568 [Multi-domain]  Cd Length: 284  Bit Score: 54.65  E-value: 1.73e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  35 DKTPERIVSYDLSILDSLNALGIE--AVGVPKSNYKD--EL-AKFAEAPKVGTLfEPDYEALKALKPDLIFAGGRSASAI 109
Cdd:cd01148    15 DKAPQRVVSNDQNTTEMMLALGLQdrMVGTAGIDNKDlpELkAKYDKVPELAKK-YPSKETVLAARPDLVFGGWSYGFDK 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 110 PELEKIA-------PVANLTN----RNPEF-LADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAG---KTGAF 174
Cdd:cd01148    94 GGLGTPDslaelgiKTYILPEscgqRRGEAtLDDVYNDIRNLGKIFDVEDRADKLVADLKARLAEISAKVKGdgkKVAVF 173
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333 175 LFVM-NGNIIPHVVGDRFGFVYELTGLESVlpaktaeeLAAPATRPAPDSPEAkaaaakraqqikaIAKADPDWLIVFDR 253
Cdd:cd01148   174 VYDSgEDKPFTSGRGGIPNAIITAAGGRNV--------FADVDESWTTVSWET-------------VIARNPDVIVIIDY 232
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 2582490333 254 AAINGGENAgEKTLAEHPDLSQTSAFKNGRVVYVDPVRWYviTGGLN 300
Cdd:cd01148   233 GDQNAAEQK-IKFLKENPALKNVPAVKNNRFIVLPLAEAT--PGIRN 276
PRK10957 PRK10957
iron-enterobactin transporter periplasmic binding protein; Provisional
7-118 2.51e-07

iron-enterobactin transporter periplasmic binding protein; Provisional


Pssm-ID: 236806 [Multi-domain]  Cd Length: 317  Bit Score: 51.51  E-value: 2.51e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333   7 IMTLTATLAIAAPSLAFE--------LEHTTGTINGDKTPERIVSYDLSILDSLnaLGIEA------VGVPKSNYKDEL- 71
Cdd:PRK10957    5 LALLLLGLLLSGIAAAQAsaagwprtVTDSRGSVTLESKPQRIVSTSVTLTGTL--LAIDApviasgATTPNTRVADDQg 82
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2582490333  72 -----AKFAEAPKVGTLF--EPDYEALKALKPDLIFA---GGRSASA-IPELEKIAPV 118
Cdd:PRK10957   83 ffrqwSDVAKERGVEVLYigEPDAEAVAAQMPDLIVIsatGGDSALAlYDQLSAIAPT 140
PRK10576 PRK10576
Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;
38-178 3.98e-04

Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD;


Pssm-ID: 236719  Cd Length: 292  Bit Score: 41.54  E-value: 3.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2582490333  38 PERIVSYDLSILDSLNALGIEAVGVP-KSNYK---DELAKFAEAPKVGTLFEPDYEALKALKPDLIFAggrSASAIPELE 113
Cdd:PRK10576   32 PNRIVALEWLPVELLLALGVTPYGVAdTHNYRlwvSEPALPDSVIDVGLRTEPNLELLTQMKPSLILW---SAGYGPSPE 108
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2582490333 114 KIAPVA-----NLTNR-NPefLADFRTNTLRLAAAFDKTKKAEEGLSNIDKDIADLQKLNAGKTGAFLFVM 178
Cdd:PRK10576  109 KLARIApgrgfAFSDGkKP--LAVARKSLVELAQRLNLEAAAETHLAQFDDFIASAKPRLAGRGQRPLLLT 177
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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