NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2585406586|ref|WP_313263359|]
View 

aldehyde dehydrogenase family protein, partial [Pseudomonas sp.]

Protein Classification

aldehyde dehydrogenase family protein( domain architecture ID 34081)

aldehyde dehydrogenase family protein is an NAD(P)(+)-dependent enzyme that may oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and may play an important role in detoxification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
ALDH-SF super family cl11961
NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily ...
34-240 4.59e-133

NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.


The actual alignment was detected with superfamily member cd07112:

Pssm-ID: 448367 [Multi-domain]  Cd Length: 462  Bit Score: 382.72  E-value: 4.59e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  34 GDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPI 113
Cdd:cd07112     1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 114 SDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPS 193
Cdd:cd07112    81 SDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2585406586 194 EKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07112   161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDAL 207
 
Name Accession Description Interval E-value
ALDH_GABALDH-PuuC cd07112
Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase ...
34-240 4.59e-133

Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like; NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.


Pssm-ID: 143430 [Multi-domain]  Cd Length: 462  Bit Score: 382.72  E-value: 4.59e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  34 GDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPI 113
Cdd:cd07112     1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 114 SDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPS 193
Cdd:cd07112    81 SDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2585406586 194 EKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07112   161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDAL 207
PRK09847 PRK09847
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
9-240 6.62e-113

gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional


Pssm-ID: 182108 [Multi-domain]  Cd Length: 494  Bit Score: 332.63  E-value: 6.62e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   9 WEQRAKALKIEGRAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMI 88
Cdd:PRK09847    9 WQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLN 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  89 RFAALLKANAEELALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWN 168
Cdd:PRK09847   89 KLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWN 168
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 169 FPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:PRK09847  169 FPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI 240
AdhE COG1012
Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and ...
19-238 1.67e-93

Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and metabolism]; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase is part of the Pathway/BioSystem: Proline degradation


Pssm-ID: 440636 [Multi-domain]  Cd Length: 479  Bit Score: 282.40  E-value: 1.67e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  19 EGRAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANA 98
Cdd:COG1012     5 EYPLFIGGEWVAAASGETFDVINPATGEVLARVPAATAEDVDAAVAAARAAF--PAWAATPPAERAAILLRAADLLEERR 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  99 EELALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDEVAATP-HDQLGLVTREPVGVVGAIVPWNFPLMMACWK 177
Cdd:COG1012    83 EELAALLTLETGKPLAEAR-GEVDRAADFLRYYAGEARRLYGETIPSDaPGTRAYVRREPLGVVGAITPWNFPLALAAWK 161
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 178 LGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:COG1012   162 LAPALAAGNTVVLKPAEQTPLSALLLAELLEEAGLPAGVLNVVTGDGSEVGAALVAHPDVD 222
Aldedh pfam00171
Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. ...
33-238 7.18e-84

Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.


Pssm-ID: 425500 [Multi-domain]  Cd Length: 459  Bit Score: 257.07  E-value: 7.18e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  33 SGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKP 112
Cdd:pfam00171   5 ESETIEVINPATGEVIATVPAATAEDVDAAIAAARAAF--PAWRKTPAAERAAILRKAADLLEERKDELAELETLENGKP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 113 ISDSLnIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKP 192
Cdd:pfam00171  83 LAEAR-GEVDRAIDVLRYYAGLARRLDGETLPSDPGRLAYTRREPLGVVGAITPWNFPLLLPAWKIAPALAAGNTVVLKP 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 2585406586 193 SEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:pfam00171 162 SELTPLTALLLAELFEEAGLPAGVLNVVTGSGAEVGEALVEHPDVR 207
BADH TIGR01804
betaine-aldehyde dehydrogenase; Under osmotic stress, betaine aldehyde dehydrogenase oxidizes ...
23-238 3.58e-62

betaine-aldehyde dehydrogenase; Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). [Cellular processes, Adaptations to atypical conditions]


Pssm-ID: 200131 [Multi-domain]  Cd Length: 467  Bit Score: 201.58  E-value: 3.58e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:TIGR01804   1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ--GEWAAMSPMERGRILRRAADLIRERNEELA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:TIGR01804  79 KLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:TIGR01804 159 AAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVA 214
 
Name Accession Description Interval E-value
ALDH_GABALDH-PuuC cd07112
Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase ...
34-240 4.59e-133

Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like; NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.


Pssm-ID: 143430 [Multi-domain]  Cd Length: 462  Bit Score: 382.72  E-value: 4.59e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  34 GDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPI 113
Cdd:cd07112     1 GETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 114 SDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPS 193
Cdd:cd07112    81 SDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPA 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2585406586 194 EKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07112   161 EQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDAL 207
PRK09847 PRK09847
gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
9-240 6.62e-113

gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional


Pssm-ID: 182108 [Multi-domain]  Cd Length: 494  Bit Score: 332.63  E-value: 6.62e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   9 WEQRAKALKIEGRAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMI 88
Cdd:PRK09847    9 WQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLN 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  89 RFAALLKANAEELALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWN 168
Cdd:PRK09847   89 KLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAAIVPWN 168
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 169 FPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:PRK09847  169 FPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAI 240
AdhE COG1012
Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and ...
19-238 1.67e-93

Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase [Lipid transport and metabolism]; Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase is part of the Pathway/BioSystem: Proline degradation


Pssm-ID: 440636 [Multi-domain]  Cd Length: 479  Bit Score: 282.40  E-value: 1.67e-93
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  19 EGRAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANA 98
Cdd:COG1012     5 EYPLFIGGEWVAAASGETFDVINPATGEVLARVPAATAEDVDAAVAAARAAF--PAWAATPPAERAAILLRAADLLEERR 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  99 EELALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDEVAATP-HDQLGLVTREPVGVVGAIVPWNFPLMMACWK 177
Cdd:COG1012    83 EELAALLTLETGKPLAEAR-GEVDRAADFLRYYAGEARRLYGETIPSDaPGTRAYVRREPLGVVGAITPWNFPLALAAWK 161
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 178 LGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:COG1012   162 LAPALAAGNTVVLKPAEQTPLSALLLAELLEEAGLPAGVLNVVTGDGSEVGAALVAHPDVD 222
Aldedh pfam00171
Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. ...
33-238 7.18e-84

Aldehyde dehydrogenase family; This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity.


Pssm-ID: 425500 [Multi-domain]  Cd Length: 459  Bit Score: 257.07  E-value: 7.18e-84
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  33 SGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKP 112
Cdd:pfam00171   5 ESETIEVINPATGEVIATVPAATAEDVDAAIAAARAAF--PAWRKTPAAERAAILRKAADLLEERKDELAELETLENGKP 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 113 ISDSLnIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKP 192
Cdd:pfam00171  83 LAEAR-GEVDRAIDVLRYYAGLARRLDGETLPSDPGRLAYTRREPLGVVGAITPWNFPLLLPAWKIAPALAAGNTVVLKP 161
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 2585406586 193 SEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:pfam00171 162 SELTPLTALLLAELFEEAGLPAGVLNVVTGSGAEVGEALVEHPDVR 207
ALDH_F1-2_Ald2-like cd07091
ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD ...
23-238 2.81e-83

ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins; ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences.


Pssm-ID: 143410  Cd Length: 476  Bit Score: 255.98  E-value: 2.81e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07091     7 FINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELA 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07091    87 ALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPAL 166
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07091   167 AAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVD 222
ALDH_BADH-GbsA cd07119
Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like; Included in this CD is ...
23-238 1.78e-78

Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like; Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.


Pssm-ID: 143437  Cd Length: 482  Bit Score: 244.14  E-value: 1.78e-78
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07119     1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSlNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07119    81 RLETLNTGKTLRES-EIDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07119   160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVD 215
ALDH_F2BC cd07142
Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like; Included in this CD is the ...
23-238 1.96e-75

Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like; Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.


Pssm-ID: 143460  Cd Length: 476  Bit Score: 235.85  E-value: 1.96e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07142     7 FINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELA 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07142    87 ALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKVGPAL 166
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07142   167 ACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVD 222
ALDH_HMSADH_HapE cd07115
Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like; 4-hydroxymuconic ...
41-238 8.08e-75

Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like; 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.


Pssm-ID: 143433 [Multi-domain]  Cd Length: 453  Bit Score: 233.87  E-value: 8.08e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  41 SPVDGRLLATVASCDASDAQCAVENARATFNsgVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNID 120
Cdd:cd07115     3 NPATGELIARVAQASAEDVDAAVAAARAAFE--AWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLD 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 121 VPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTA 200
Cdd:cd07115    81 VPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2585406586 201 IRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07115   161 LRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVD 198
ALDH_F1AB_F2_RALDH1 cd07141
NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like; NAD+-dependent ...
23-238 2.33e-71

NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like; NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.


Pssm-ID: 143459  Cd Length: 481  Bit Score: 225.69  E-value: 2.33e-71
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSG-VWSRLAPAKRKTVMIRFAALLKANAEEL 101
Cdd:cd07141    10 FINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGsPWRTMDASERGRLLNKLADLIERDRAYL 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 102 ALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPA 181
Cdd:cd07141    90 ASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPA 169
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 182 LSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07141   170 LACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDID 226
ALDH_ALD2-YMR170C cd07144
Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like; NAD(P)+-dependent ...
23-238 1.20e-70

Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like; NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.


Pssm-ID: 143462  Cd Length: 484  Bit Score: 223.82  E-value: 1.20e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07144    11 FINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFES-WWSKVTGEERGELLDKLADLVEKNRDLLA 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07144    90 AIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPAL 169
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07144   170 AAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVD 225
PLN02766 PLN02766
coniferyl-aldehyde dehydrogenase
23-238 3.01e-70

coniferyl-aldehyde dehydrogenase


Pssm-ID: 215410 [Multi-domain]  Cd Length: 501  Bit Score: 223.16  E-value: 3.01e-70
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:PLN02766   24 FINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELA 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:PLN02766  104 ALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPAL 183
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:PLN02766  184 AAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVD 239
ALDH_DhaS cd07114
Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like; Uncharacterized ...
40-238 3.76e-69

Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like; Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.


Pssm-ID: 143432 [Multi-domain]  Cd Length: 457  Bit Score: 219.34  E-value: 3.76e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNi 119
Cdd:cd07114     2 INPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA- 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPH-DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPL 198
Cdd:cd07114    81 QVRYLAEWYRYYAGLADKIEGAVIPVDKgDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2585406586 199 TAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07114   161 STLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVA 200
ALDH_F8_HMSADH cd07093
Human aldehyde dehydrogenase family 8 member A1-like; In humans, the aldehyde dehydrogenase ...
40-238 4.35e-69

Human aldehyde dehydrogenase family 8 member A1-like; In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.


Pssm-ID: 143412 [Multi-domain]  Cd Length: 455  Bit Score: 218.97  E-value: 4.35e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNI 119
Cdd:cd07093     2 FNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPG--WSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07093    80 DIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2585406586 200 AIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07093   160 AWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVD 198
PLN02466 PLN02466
aldehyde dehydrogenase family 2 member
24-240 8.07e-69

aldehyde dehydrogenase family 2 member


Pssm-ID: 215259 [Multi-domain]  Cd Length: 538  Bit Score: 220.45  E-value: 8.07e-69
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  24 INGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELAL 103
Cdd:PLN02466   62 INGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAA 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 104 LETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEV--AATPHDQLGLvtREPVGVVGAIVPWNFPLMMACWKLGPA 181
Cdd:PLN02466  142 LETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTvpADGPHHVQTL--HEPIGVAGQIIPWNFPLLMFAWKVGPA 219
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2585406586 182 LSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:PLN02466  220 LACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKL 278
ALDH cd07078
NAD(P)+ dependent aldehyde dehydrogenase family; The aldehyde dehydrogenase family (ALDH) of ...
62-238 1.16e-67

NAD(P)+ dependent aldehyde dehydrogenase family; The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group.


Pssm-ID: 143397 [Multi-domain]  Cd Length: 432  Bit Score: 214.76  E-value: 1.16e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDE 141
Cdd:cd07078     3 AVAAARAAFKA--WAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 142 VAATPH-DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVL 220
Cdd:cd07078    80 VIPSPDpGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVV 159
                         170
                  ....*....|....*...
gi 2585406586 221 PGYGHTVGNALAVHMDVD 238
Cdd:cd07078   160 TGDGDEVGAALASHPRVD 177
ALDH_AldA_AN0554 cd07143
Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like; NAD(P)+-dependent aldehyde ...
23-238 1.68e-67

Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like; NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.


Pssm-ID: 143461  Cd Length: 481  Bit Score: 215.86  E-value: 1.68e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07143    10 FINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLA 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07143    90 SIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPAL 169
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07143   170 AAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDID 225
ALDH_ACDHII_AcoD-like cd07559
Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus ...
23-240 1.29e-66

Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like; Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.


Pssm-ID: 143471 [Multi-domain]  Cd Length: 480  Bit Score: 213.36  E-value: 1.29e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07559     4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKT--WGKTSVAERANILNKIADRIEENLELLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07559    82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPAL 161
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALaVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07559   162 AAGNTVVLKPASQTPLSILVLMEL-IGDLLPKGVVNVVTGFGSEAGKPLASHPRIAKL 218
ALDH_AAS00426 cd07109
Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like; ...
40-241 3.63e-66

Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like; Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.


Pssm-ID: 143427 [Multi-domain]  Cd Length: 454  Bit Score: 211.32  E-value: 3.63e-66
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSGvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNi 119
Cdd:cd07109     2 FDPSTGEVFARIARGGAADVDRAVQAARRAFESG-WLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARA- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07109    80 DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 2585406586 200 AIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTLV 241
Cdd:cd07109   160 ALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHIS 201
ALDH_AldA-Rv0768 cd07139
Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like; The Mycobacterium tuberculosis ...
23-238 1.39e-65

Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like; The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.


Pssm-ID: 143457 [Multi-domain]  Cd Length: 471  Bit Score: 210.51  E-value: 1.39e-65
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07139     2 FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKI-YDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPA 181
Cdd:cd07139    82 RLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFpFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAPA 161
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 182 LSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGyGHTVGNALAVHMDVD 238
Cdd:cd07139   162 LAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVD 217
ALDH_F5_SSADH_GabD cd07103
Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like; ...
40-231 6.09e-64

Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like; Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.


Pssm-ID: 143421 [Multi-domain]  Cd Length: 451  Bit Score: 205.36  E-value: 6.09e-64
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnI 119
Cdd:cd07103     2 INPATGEVIGEVPDAGAADADAAIDAAAAAFKT--WRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEAR-G 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPH-DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPL 198
Cdd:cd07103    79 EVDYAASFLEWFAEEARRIYGRTIPSPApGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPL 158
                         170       180       190
                  ....*....|....*....|....*....|...
gi 2585406586 199 TAIRIAALAVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:cd07103   159 SALALAELAEEAGLPAGVLNVVTGSPAEIGEAL 191
BADH TIGR01804
betaine-aldehyde dehydrogenase; Under osmotic stress, betaine aldehyde dehydrogenase oxidizes ...
23-238 3.58e-62

betaine-aldehyde dehydrogenase; Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). [Cellular processes, Adaptations to atypical conditions]


Pssm-ID: 200131 [Multi-domain]  Cd Length: 467  Bit Score: 201.58  E-value: 3.58e-62
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:TIGR01804   1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQ--GEWAAMSPMERGRILRRAADLIRERNEELA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:TIGR01804  79 KLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLGGPSFAYTIREPLGVCVGIGAWNYPLQIASWKIAPAL 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:TIGR01804 159 AAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQGDGAEVGPLLVNHPDVA 214
ALDH_CddD_SSP0762 cd07138
Rhodococcus ruber 6-oxolauric acid dehydrogenase-like; The 6-oxolauric acid dehydrogenase ...
23-238 1.51e-61

Rhodococcus ruber 6-oxolauric acid dehydrogenase-like; The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.


Pssm-ID: 143456 [Multi-domain]  Cd Length: 466  Bit Score: 199.65  E-value: 1.51e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07138     2 YIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPA--WSATSVEERAALLERIAEAYEARADELA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKI-YDEVAATphdqlGLVTREPVGVVGAIVPWNFPLMMACWKLGPA 181
Cdd:cd07138    80 QAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFeFEERRGN-----SLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 182 LSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07138   155 LAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVD 211
PRK13252 PRK13252
betaine aldehyde dehydrogenase; Provisional
21-238 1.65e-61

betaine aldehyde dehydrogenase; Provisional


Pssm-ID: 183918  Cd Length: 488  Bit Score: 200.11  E-value: 1.65e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  21 RAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEE 100
Cdd:PRK13252    8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQ--KIWAAMTAMERSRILRRAVDILRERNDE 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 101 LALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGP 180
Cdd:PRK13252   86 LAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAP 165
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 181 ALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGhTVGNALAVHMDVD 238
Cdd:PRK13252  166 ALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDG-RVGAWLTEHPDIA 222
ALDH_LactADH-AldA cd07088
Escherichia coli lactaldehyde dehydrogenase AldA-like; Lactaldehyde dehydrogenase from ...
23-238 3.18e-61

Escherichia coli lactaldehyde dehydrogenase AldA-like; Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.


Pssm-ID: 143407 [Multi-domain]  Cd Length: 468  Bit Score: 199.03  E-value: 3.18e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07088     1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKA--WERLPAIERAAYLRKLADLIRENADELA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSlNIDVPGAAQALSWSGEAIDKIYDEVAA--TPHDQLgLVTREPVGVVGAIVPWNFPLMMACWKLGP 180
Cdd:cd07088    79 KLIVEEQGKTLSLA-RVEVEFTADYIDYMAEWARRIEGEIIPsdRPNENI-FIFKVPIGVVAGILPWNFPFFLIARKLAP 156
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 181 ALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07088   157 ALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVG 214
ALDH-SF cd06534
NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily ...
66-238 3.31e-61

NAD(P)+-dependent aldehyde dehydrogenase superfamily; The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.


Pssm-ID: 143395 [Multi-domain]  Cd Length: 367  Bit Score: 196.30  E-value: 3.31e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  66 ARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDEVAAT 145
Cdd:cd06534     3 ARAAFKA--WAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEAL-GEVARAIDTFRYAAGLADKLGGPELPS 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 146 PHDQ-LGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYG 224
Cdd:cd06534    80 PDPGgEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGG 159
                         170
                  ....*....|....
gi 2585406586 225 HTVGNALAVHMDVD 238
Cdd:cd06534   160 DEVGAALLSHPRVD 173
PRK13473 PRK13473
aminobutyraldehyde dehydrogenase;
23-238 1.38e-60

aminobutyraldehyde dehydrogenase;


Pssm-ID: 237391  Cd Length: 475  Bit Score: 197.44  E-value: 1.38e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:PRK13473    6 LINGELVAG-EGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPE--WSQTTPKERAEALLKLADAIEENADEFA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVP----------GAAQAL--SWSGEaidkiYDEvaatphDQLGLVTREPVGVVGAIVPWNFP 170
Cdd:PRK13473   83 RLESLNCGKPLHLALNDEIPaivdvfrffaGAARCLegKAAGE-----YLE------GHTSMIRRDPVGVVASIAPWNYP 151
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 171 LMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAgIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:PRK13473  152 LMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVR 218
ALDH_F1L_FTFDH cd07140
10-formyltetrahydrofolate dehydrogenase, ALDH family 1L; 10-formyltetrahydrofolate ...
16-237 1.38e-60

10-formyltetrahydrofolate dehydrogenase, ALDH family 1L; 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.


Pssm-ID: 143458 [Multi-domain]  Cd Length: 486  Bit Score: 197.72  E-value: 1.38e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  16 LKIEGRAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLK 95
Cdd:cd07140     2 LKMPHQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLME 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  96 ANAEELALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEV----AATPHDQLGLVTREPVGVVGAIVPWNFPL 171
Cdd:cd07140    82 EHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTipinQARPNRNLTLTKREPIGVCGIVIPWNYPL 161
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 172 MMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDV 237
Cdd:cd07140   162 MMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDV 227
ALDH_StaphAldA1 cd07117
Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like; ...
23-240 3.57e-60

Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like; Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.


Pssm-ID: 143435  Cd Length: 475  Bit Score: 196.52  E-value: 3.57e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07117     4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKT--WRKTTVAERANILNKIADIIDENKELLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07117    82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPAL 161
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALaVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07117   162 AAGNTVVIKPSSTTSLSLLELAKI-IQDVLPKGVVNIVTGKGSKSGEYLLNHPGLDKL 218
ALDH_SNDH cd07118
Gluconobacter oxydans L-sorbosone dehydrogenase-like; Included in this CD is the L-sorbosone ...
40-238 3.76e-59

Gluconobacter oxydans L-sorbosone dehydrogenase-like; Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.


Pssm-ID: 143436 [Multi-domain]  Cd Length: 454  Bit Score: 193.32  E-value: 3.76e-59
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNi 119
Cdd:cd07118     2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARG- 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAA--------QALSWSGEAIDKIYDevaatphDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILK 191
Cdd:cd07118    81 EIEGAAdlwryaasLARTLHGDSYNNLGD-------DMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVK 153
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2585406586 192 PSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07118   154 PSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVD 200
ALDH_F16 cd07111
Aldehyde dehydrogenase family 16A1-like; Uncharacterized aldehyde dehydrogenase family 16 ...
23-238 1.26e-57

Aldehyde dehydrogenase family 16A1-like; Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.


Pssm-ID: 143429 [Multi-domain]  Cd Length: 480  Bit Score: 189.91  E-value: 1.26e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07111    25 FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFES--WSALPGHVRARHLYRIARHIQKHQRLFA 102
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAAtphdqlglvtREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07111   103 VLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTELAG----------WKPVGVVGQIVPWNFPLLMLAWKICPAL 172
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTvGNALAVHMDVD 238
Cdd:cd07111   173 AMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSF-GSALANHPGVD 227
ALDH_PADH_NahF cd07113
Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like; NAD+-dependent, ...
23-237 5.00e-55

Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like; NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.


Pssm-ID: 143431  Cd Length: 477  Bit Score: 183.03  E-value: 5.00e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLaPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07113     3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTT-PAERGRILLRLADLIEQHGEELA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAAT--PHDQ----LGLVTREPVGVVGAIVPWNFPLMMACW 176
Cdd:cd07113    82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPsiPSMQgeryTAFTRREPVGVVAGIVPWNFSVMIAVW 161
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 177 KLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHtVGNALAVHMDV 237
Cdd:cd07113   162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPDV 221
PLN02278 PLN02278
succinic semialdehyde dehydrogenase
11-231 9.96e-55

succinic semialdehyde dehydrogenase


Pssm-ID: 215157 [Multi-domain]  Cd Length: 498  Bit Score: 182.58  E-value: 9.96e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  11 QRAKALKIEGraYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRF 90
Cdd:PLN02278   18 RNAGLLRTQG--LIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPS--WSKLTASERSKILRRW 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  91 AALLKANAEELALLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDKIYDEVAATPH-DQLGLVTREPVGVVGAIVPWNF 169
Cdd:PLN02278   94 YDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFpDRRLLVLKQPVGVVGAITPWNF 172
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 170 PLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:PLN02278  173 PLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDAL 234
ALDH_CddD-AldA-like cd07089
Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins; The 6-oxolauric ...
40-238 1.37e-54

Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins; The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.


Pssm-ID: 143408 [Multi-domain]  Cd Length: 459  Bit Score: 181.29  E-value: 1.37e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRlAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNI 119
Cdd:cd07089     2 INPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWST-DAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLG-----LVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSE 194
Cdd:cd07089    81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGgpgrrVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2585406586 195 KSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07089   161 DTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVD 204
ALDH_AldH-CAJ73105 cd07131
Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like; ...
23-239 1.00e-53

Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like; Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.


Pssm-ID: 143449 [Multi-domain]  Cd Length: 478  Bit Score: 179.85  E-value: 1.00e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGR-LLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEEL 101
Cdd:cd07131     2 YIGGEWVDSASGETFDSRNPADLEeVVGTFPLSTASDVDAAVEAAREAF--PEWRKVPAPRRAEYLFRAAELLKKRKEEL 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 102 ALLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDKIYDEVaaTPH---DQLGLVTREPVGVVGAIVPWNFPLMMACWKL 178
Cdd:cd07131    80 ARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGET--VPSelpNKDAMTRRQPIGVVALITPWNFPVAIPSWKI 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 179 GPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDT 239
Cdd:cd07131   157 FPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDV 217
ALDH_F6_MMSDH cd07085
Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Methylmalonate ...
23-238 2.12e-53

Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2; Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.


Pssm-ID: 143404 [Multi-domain]  Cd Length: 478  Bit Score: 178.86  E-value: 2.12e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07085     4 FINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPA--WSATPVLKRQQVMFKFRQLLEENLDELA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSL--------NIDVPGAAQALSwSGEaidkiYDEVAATPHDQLglVTREPVGVVGAIVPWNFPLMMA 174
Cdd:cd07085    82 RLITLEHGKTLADARgdvlrgleVVEFACSIPHLL-KGE-----YLENVARGIDTY--SYRQPLGVVAGITPFNFPAMIP 153
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2585406586 175 CWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGyGHTVGNALAVHMDVD 238
Cdd:cd07085   154 LWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG-GKEAVNALLDHPDIK 216
ALDH_ACDHII-AcoD cd07116
Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like; Included in this CD is ...
23-237 1.70e-52

Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like; Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.


Pssm-ID: 143434 [Multi-domain]  Cd Length: 479  Bit Score: 176.49  E-value: 1.70e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07116     4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEA--WGKTSVAERANILNKIADRMEANLEMLA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:cd07116    82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPAL 161
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAgIPKGVFNVLPGYGHTVGNALAVHMDV 237
Cdd:cd07116   162 AAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRI 215
ALDH_F9_TMBADH cd07090
NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1; NAD+-dependent, ...
40-237 2.22e-52

NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1; NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.


Pssm-ID: 143409 [Multi-domain]  Cd Length: 457  Bit Score: 175.57  E-value: 2.22e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnI 119
Cdd:cd07090     2 IEPATGEVLATVHCAGAEDVDLAVKSAKAAQKE--WSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEAR-V 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07090    79 DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLT 158
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2585406586 200 AIRIAALAVEAGIPKGVFNVLPGYGHTvGNALAVHMDV 237
Cdd:cd07090   159 ALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDV 195
ALDH_KGSADH-YcbD cd07097
Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like; ...
21-238 1.32e-51

Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like; Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.


Pssm-ID: 143415 [Multi-domain]  Cd Length: 473  Bit Score: 173.97  E-value: 1.32e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  21 RAYINGEYTAavSGDTFECISPVDGR-LLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAE 99
Cdd:cd07097     2 RNYIDGEWVA--GGDGEENRNPSDTSdVVGKYARASAEDADAAIAAAAAAFPA--WRRTSPEARADILDKAGDELEARKE 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 100 ELALLETLDMGKPISDSLNiDVPGAAQALSW-SGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKL 178
Cdd:cd07097    78 ELARLLTREEGKTLPEARG-EVTRAGQIFRYyAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 179 GPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07097   157 APALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVD 216
ALDH_ABALDH-YdcW cd07092
Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like; NAD ...
40-238 1.53e-51

Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like; NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.


Pssm-ID: 143411 [Multi-domain]  Cd Length: 450  Bit Score: 173.28  E-value: 1.53e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNI 119
Cdd:cd07092     2 VDPATGEEIATVPDASAADVDAAVAAAHAAFPS--WRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDD 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIdKIYDEVAATPH--DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSP 197
Cdd:cd07092    80 ELPGAVDNFRFFAGAA-RTLEGPAAGEYlpGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTP 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2585406586 198 LTAIRIAALAVEaGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07092   159 LTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVR 198
PLN02467 PLN02467
betaine aldehyde dehydrogenase
23-238 7.61e-51

betaine aldehyde dehydrogenase


Pssm-ID: 215260 [Multi-domain]  Cd Length: 503  Bit Score: 172.61  E-value: 7.61e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATF---NSGVWSRLAPAKRKTVMIRFAALLKANAE 99
Cdd:PLN02467   11 FIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFkrnKGKDWARTTGAVRAKYLRAIAAKITERKS 90
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 100 ELALLETLDMGKPISDSL--NIDVPGAAQALSWSGEAIDKIYDEVAATPHDQL-GLVTREPVGVVGAIVPWNFPLMMACW 176
Cdd:PLN02467   91 ELAKLETLDCGKPLDEAAwdMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFkGYVLKEPLGVVGLITPWNYPLLMATW 170
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 177 KLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:PLN02467  171 KVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGVD 232
ALDH_y4uC cd07149
Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1; ...
37-237 1.34e-50

Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1; Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.


Pssm-ID: 143467 [Multi-domain]  Cd Length: 453  Bit Score: 170.85  E-value: 1.34e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  37 FECISPVDGRLLATVASCDASDAQCAVENARATFNSGvwSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDS 116
Cdd:cd07149     1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEM--KSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 117 LNiDVPGAAQALSWSGEAIDKIYDEV-----AATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILK 191
Cdd:cd07149    79 RK-EVDRAIETLRLSAEEAKRLAGETipfdaSPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLK 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*.
gi 2585406586 192 PSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDV 237
Cdd:cd07149   158 PASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRV 203
ALDH_AldA-AAD23400 cd07106
Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like; Putative ...
40-238 2.18e-50

Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like; Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.


Pssm-ID: 143424 [Multi-domain]  Cd Length: 446  Bit Score: 170.02  E-value: 2.18e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSlNI 119
Cdd:cd07106     2 INPATGEVFASAPVASEAQLDQAVAAAKAAFPG--WSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEA-QF 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQalsWSGE-AIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPL 198
Cdd:cd07106    79 EVGGAVA---WLRYtASLDLPDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPL 155
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 2585406586 199 TAIRIAALAVEAgIPKGVFNVLPGyGHTVGNALAVHMDVD 238
Cdd:cd07106   156 CTLKLGELAQEV-LPPGVLNVVSG-GDELGPALTSHPDIR 193
ALDH_F10_BADH cd07110
Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like; Present in ...
40-240 4.58e-50

Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like; Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.


Pssm-ID: 143428 [Multi-domain]  Cd Length: 456  Bit Score: 169.45  E-value: 4.58e-50
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnI 119
Cdd:cd07110     2 INPATEATIGEIPAATAEDVDAAVRAARRAFPR--WKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAA-W 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSG---EAIDKIYDEVAATPHDQL-GLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEK 195
Cdd:cd07110    79 DVDDVAGCFEYYAdlaEQLDAKAERAVPLPSEDFkARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSEL 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 2585406586 196 SPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07110   159 TSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKI 203
ALDH_LactADH_F420-Bios cd07145
Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like; NAD+-dependent, ...
37-238 1.77e-49

Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like; NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.


Pssm-ID: 143463 [Multi-domain]  Cd Length: 456  Bit Score: 167.91  E-value: 1.77e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  37 FECISPVDGRLLATVASCDASDAQCAVENARATFNsgVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDS 116
Cdd:cd07145     1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKD--VMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQS 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 117 lNIDVPGAAQALSWSGEAIDKIYDE---VAATPHDQLGLV--TREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILK 191
Cdd:cd07145    79 -RVEVERTIRLFKLAAEEAKVLRGEtipVDAYEYNERRIAftVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVK 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 2585406586 192 PSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07145   158 PSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVN 204
ALDH_F21_LactADH-like cd07094
ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related ...
38-240 5.19e-49

ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins; ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.


Pssm-ID: 143413 [Multi-domain]  Cd Length: 453  Bit Score: 166.84  E-value: 5.19e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  38 ECISPVDGRLLATVASCDASDAQCAVENARATFNsgVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSL 117
Cdd:cd07094     2 DVHNPYDGEVIGKVPADDRADAEEALATARAGAE--NRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDAR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 118 nIDVPGAAQALSWSGEAIDKIYDEV-----AATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKP 192
Cdd:cd07094    80 -VEVDRAIDTLRLAAEEAERIRGEEipldaTQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKP 158
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 2585406586 193 SEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07094   159 ASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAML 206
ALDH_PhdK-like cd07107
Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like; Nocardioides sp. strain ...
40-238 2.21e-46

Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like; Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.


Pssm-ID: 143425 [Multi-domain]  Cd Length: 456  Bit Score: 159.85  E-value: 2.21e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNi 119
Cdd:cd07107     2 INPATGQVLARVPAASAADVDRAVAAARAAFPE--WRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLG- 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07107    79 DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLS 158
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2585406586 200 AIRIAALAVEAgIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07107   159 ALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVK 196
ALDH_MGR_2402 cd07108
Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like; NAD(P)+-dependent ...
40-240 1.16e-45

Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like; NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.


Pssm-ID: 143426  Cd Length: 457  Bit Score: 157.91  E-value: 1.16e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNI 119
Cdd:cd07108     2 INPATGQVIGEVPRSRAADVDRAVAAAKAAF--PEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARP 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07108    80 EAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|.
gi 2585406586 200 AIRIAALAVEAgIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07108   160 VLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKV 199
ALDH_F11_NP-GAPDH cd07082
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family ...
22-238 1.24e-42

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11; NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.


Pssm-ID: 143401 [Multi-domain]  Cd Length: 473  Bit Score: 150.41  E-value: 1.24e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  22 AYINGEYTAAvSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNsGVWSRLAPAKRKTVMIRFAALLKANAEEL 101
Cdd:cd07082     4 YLINGEWKES-SGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGR-GWWPTMPLEERIDCLHKFADLLKENKEEV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 102 ALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDEVA---ATPHDQ--LGLVTREPVGVVGAIVPWNFPLMMACW 176
Cdd:cd07082    82 ANLLMWEIGKTLKDAL-KEVDRTIDYIRDTIEELKRLDGDSLpgdWFPGTKgkIAQVRREPLGVVLAIGPFNYPLNLTVS 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 177 KLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07082   161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGRID 222
ALDH_PutA-P5CDH-RocA cd07124
Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA; Delta(1)-pyrroline-5-carboxylate ...
20-238 2.17e-42

Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA; Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.


Pssm-ID: 143442  Cd Length: 512  Bit Score: 150.45  E-value: 2.17e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  20 GRAY---INGEytAAVSGDTFECISPVD-GRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLK 95
Cdd:cd07124    30 GREYplvIGGK--EVRTEEKIESRNPADpSEVLGTVQKATKEEAEAAVQAARAAFPT--WRRTPPEERARLLLRAAALLR 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  96 ANAEELALLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMAC 175
Cdd:cd07124   106 RRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILA 184
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2585406586 176 WKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07124   185 GMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVR 247
ALDH_F7_AASADH-like cd07086
NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins; ALDH ...
23-240 1.34e-40

NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins; ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).


Pssm-ID: 143405 [Multi-domain]  Cd Length: 478  Bit Score: 145.01  E-value: 1.34e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:cd07086     2 VIGGEWVGS-GGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAF--KEWRKVPAPRRGEIVRQIGEALRKKKEALG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLnidvpGAAQalswsgEAID----------KIYDEVAAT--P-HDQLglVTREPVGVVGAIVPWNF 169
Cdd:cd07086    79 RLVSLEMGKILPEGL-----GEVQ------EMIDicdyavglsrMLYGLTIPSerPgHRLM--EQWNPLGVVGVITAFNF 145
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2585406586 170 PLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEA----GIPKGVFNVLPGYGhTVGNALAVHMDVDTL 240
Cdd:cd07086   146 PVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVleknGLPPGVVNLVTGGG-DGGELLVHDPRVPLV 219
gabD PRK11241
NADP-dependent succinate-semialdehyde dehydrogenase I;
21-231 1.70e-40

NADP-dependent succinate-semialdehyde dehydrogenase I;


Pssm-ID: 183050 [Multi-domain]  Cd Length: 482  Bit Score: 144.66  E-value: 1.70e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  21 RAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEE 100
Cdd:PRK11241   12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPA--WRALTAKERANILRRWFNLMMEHQDD 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 101 LALLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDKIY-DEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLG 179
Cdd:PRK11241   90 LARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYgDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 168
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 180 PALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:PRK11241  169 PALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGEL 220
ALDH_VaniDH_like cd07150
Pseudomonas putida vanillin dehydrogenase-like; Vanillin dehydrogenase (Vdh, VaniDH) involved ...
37-238 7.02e-40

Pseudomonas putida vanillin dehydrogenase-like; Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.


Pssm-ID: 143468 [Multi-domain]  Cd Length: 451  Bit Score: 142.47  E-value: 7.02e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  37 FECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKP---- 112
Cdd:cd07150     1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPA--WAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTygka 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 113 ---ISDSLNIDVPGAAQALSWSGEAIdkiydevaatPHDQLGLVT---REPVGVVGAIVPWNFPLMMACWKLGPALSTGN 186
Cdd:cd07150    79 wfeTTFTPELLRAAAGECRRVRGETL----------PSDSPGTVSmsvRRPLGVVAGITPFNYPLILATKKVAFALAAGN 148
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 187 SVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07150   149 TVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVR 200
ALDH_PhpJ cd07146
Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like; Putative ...
42-238 2.28e-38

Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like; Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.


Pssm-ID: 143464 [Multi-domain]  Cd Length: 451  Bit Score: 138.65  E-value: 2.28e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  42 PVDGRLLATVASCDASDAQCAVENARATFnsgvwSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSL---- 117
Cdd:cd07146     6 PYTGEVVGTVPAGTEEALREALALAASYR-----STLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRyevg 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 118 ---NIDVPGAAQALSWSGEAIDKiydEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSE 194
Cdd:cd07146    81 raaDVLRFAAAEALRDDGESFSC---DLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSE 157
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 2585406586 195 KSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07146   158 KTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVD 201
ALDH_F21_RNP123 cd07147
Aldehyde dehydrogenase family 21A1-like; Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) ...
37-221 7.57e-38

Aldehyde dehydrogenase family 21A1-like; Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.


Pssm-ID: 143465 [Multi-domain]  Cd Length: 452  Bit Score: 136.99  E-value: 7.57e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  37 FECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDS 116
Cdd:cd07147     1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRP--MRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 117 lNIDVPGAAQALSWSGEAIDKIYDEV-----AATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILK 191
Cdd:cd07147    79 -RGEVARAIDTFRIAAEEATRIYGEVlpldiSARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLK 157
                         170       180       190
                  ....*....|....*....|....*....|
gi 2585406586 192 PSEKSPLTAIRIAALAVEAGIPKGVFNVLP 221
Cdd:cd07147   158 PASRTPLSALILGEVLAETGLPKGAFSVLP 187
ALDH_PsfA-ACA09737 cd07120
Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like; Included in this CD is the ...
40-240 9.77e-38

Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like; Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.


Pssm-ID: 143438 [Multi-domain]  Cd Length: 455  Bit Score: 136.70  E-value: 9.77e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRlAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSlNI 119
Cdd:cd07120     2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEA-RF 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:cd07120    80 EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQI 159
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 2585406586 200 AIRIAALAVEA-GIPKGVFNVLPGYGHTVGNALAVHMDVDTL 240
Cdd:cd07120   160 NAAIIRILAEIpSLPAGVVNLFTESGSEGAAHLVASPDVDVI 201
ALDH_EDX86601 cd07102
Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601); ...
40-232 5.67e-36

Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601); Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.


Pssm-ID: 143420 [Multi-domain]  Cd Length: 452  Bit Score: 131.98  E-value: 5.67e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSlni 119
Cdd:cd07102     1 ISPIDGSVIAERPLASLEAVRAALERARAAQKG--WRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQA--- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 dvPGAAQALSWSGEAIDKIYDEVAAT----PHDQL-GLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSE 194
Cdd:cd07102    76 --GGEIRGMLERARYMISIAEEALADirvpEKDGFeRYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSP 153
                         170       180       190
                  ....*....|....*....|....*....|....*...
gi 2585406586 195 KSPLTAIRIAALAVEAGIPKGVFNVLPGyGHTVGNALA 232
Cdd:cd07102   154 QTPLCGERFAAAFAEAGLPEGVFQVLHL-SHETSAALI 190
ALDH_PutA-P5CDH cd07125
Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA; The proline catabolic enzymes of the ...
6-238 5.79e-36

Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA; The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.


Pssm-ID: 143443 [Multi-domain]  Cd Length: 518  Bit Score: 133.09  E-value: 5.79e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   6 RADWEQRAKALK----IEGRAY--INGEytAAVSGDTFECISPVDG-RLLATVASCDASDAQCAVENARATFNSgvWSRL 78
Cdd:cd07125    13 EVPLEALADALKafdeKEWEAIpiINGE--ETETGEGAPVIDPADHeRTIGEVSLADAEDVDAALAIAAAAFAG--WSAT 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  79 APAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNiDVpgaaqalswsGEAID-----------KIYDEVAATPH 147
Cdd:cd07125    89 PVEERAEILEKAADLLEANRGELIALAAAEAGKTLADADA-EV----------REAIDfcryyaaqareLFSDPELPGPT 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 148 DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTV 227
Cdd:cd07125   158 GELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEI 237
                         250
                  ....*....|.
gi 2585406586 228 GNALAVHMDVD 238
Cdd:cd07125   238 GEALVAHPRID 248
gabD2 PRK09407
succinic semialdehyde dehydrogenase; Reviewed
30-236 5.90e-36

succinic semialdehyde dehydrogenase; Reviewed


Pssm-ID: 236501 [Multi-domain]  Cd Length: 524  Bit Score: 133.08  E-value: 5.90e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  30 AAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATfnSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDM 109
Cdd:PRK09407   27 DGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAA--QRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLET 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 110 GKPISDSLN--IDVPGAAQALSWSGEAIDKiydevaatPHDQLGL--------VTREPVGVVGAIVPWNFPLMMACWKLG 179
Cdd:PRK09407  105 GKARRHAFEevLDVALTARYYARRAPKLLA--------PRRRAGAlpvltkttELRQPKGVVGVISPWNYPLTLAVSDAI 176
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 180 PALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMD 236
Cdd:PRK09407  177 PALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDNAD 233
ALDH_BenzADH-like cd07104
ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, ...
58-238 2.50e-34

ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins; ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.


Pssm-ID: 143422 [Multi-domain]  Cd Length: 431  Bit Score: 127.26  E-value: 2.50e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  58 DAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLetldmgkpisdslNIDVPGAAQALSWS--GEAI 135
Cdd:cd07104     1 DVDRAYAAAAAAQKA--WAATPPQERAAILRKAAEILEERRDEIADW-------------LIRESGSTRPKAAFevGAAI 65
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 136 dKIYDEVAATPH------------DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT-AIR 202
Cdd:cd07104    66 -AILREAAGLPRrpegeilpsdvpGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTgGLL 144
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2585406586 203 IAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:cd07104   145 IAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVR 180
ALDH_DDALDH cd07099
Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like; The 4,4 ...
40-231 4.08e-34

Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like; The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.


Pssm-ID: 143417 [Multi-domain]  Cd Length: 453  Bit Score: 126.95  E-value: 4.08e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATfnSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnI 119
Cdd:cd07099     1 RNPATGEVLGEVPVTDPAEVAAAVARARAA--QRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAG-L 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPH----DQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEK 195
Cdd:cd07099    78 EVLLALEAIDWAARNAPRVLAPRKVPTGllmpNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEV 157
                         170       180       190
                  ....*....|....*....|....*....|....*.
gi 2585406586 196 SPLTAIRIAALAVEAGIPKGVFNVLPGYGHTvGNAL 231
Cdd:cd07099   158 TPLVGELLAEAWAAAGPPQGVLQVVTGDGAT-GAAL 192
ALDH_SSADH2_GabD2 cd07101
Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like; Succinate-semialdehyde ...
40-236 2.40e-33

Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like; Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).


Pssm-ID: 143419 [Multi-domain]  Cd Length: 454  Bit Score: 125.11  E-value: 2.40e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLN- 118
Cdd:cd07101     1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRA--WAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEe 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 119 -IDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSP 197
Cdd:cd07101    79 vLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTA 158
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 2585406586 198 LTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMD 236
Cdd:cd07101   159 LTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDNAD 197
MMSDH TIGR01722
methylmalonic acid semialdehyde dehydrogenase; Involved in valine catabolism, ...
21-237 3.51e-33

methylmalonic acid semialdehyde dehydrogenase; Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. [Energy metabolism, Amino acids and amines]


Pssm-ID: 130783  Cd Length: 477  Bit Score: 124.99  E-value: 3.51e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  21 RAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEE 100
Cdd:TIGR01722   2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLT--WGQTSLAQRTSVLLRYQALLKEHRDE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 101 LALLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVT-REPVGVVGAIVPWNFPLMMACWKLG 179
Cdd:TIGR01722  80 IAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSiRQPLGVCAGITPFNFPAMIPLWMFP 158
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 180 PALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGyGHTVGNALAVHMDV 237
Cdd:TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG-DKEAVDRLLEHPDV 215
astD PRK09457
succinylglutamic semialdehyde dehydrogenase; Reviewed
23-240 5.70e-32

succinylglutamic semialdehyde dehydrogenase; Reviewed


Pssm-ID: 181873  Cd Length: 487  Bit Score: 121.60  E-value: 5.70e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:PRK09457    4 WINGDWIAG-QGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPA--WARLSFEERQAIVERFAALLEENKEELA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLN--------IDVPGAAQAlSWSGEAIDKIYDEVAATPHdqlglvtrEPVGVVGAIVPWNFPLMMA 174
Cdd:PRK09457   81 EVIARETGKPLWEAATevtaminkIAISIQAYH-ERTGEKRSEMADGAAVLRH--------RPHGVVAVFGPYNFPGHLP 151
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 175 CWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGyGHTVGNALAVHMDVDTL 240
Cdd:PRK09457  152 NGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGL 216
ALDH_HBenzADH cd07151
NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like; NADP+-dependent, ...
26-234 2.81e-31

NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like; NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.


Pssm-ID: 143469 [Multi-domain]  Cd Length: 465  Bit Score: 119.72  E-value: 2.81e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  26 GEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLE 105
Cdd:cd07151     1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKE--WAATLPQERAEILEKAAQILEERRDEIVEWL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 106 TLDMGKPISDSlNIDVpGAAQAlswsgeaidkIYDEVAATPHDQLGL------------VTREPVGVVGAIVPWNFPLMM 173
Cdd:cd07151    79 IRESGSTRIKA-NIEW-GAAMA----------ITREAATFPLRMEGRilpsdvpgkenrVYREPLGVVGVISPWNFPLHL 146
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 174 ACWKLGPALSTGNSVILKPSEKSPLTA-IRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVH 234
Cdd:cd07151   147 SMRSVAPALALGNAVVLKPASDTPITGgLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEH 208
ALDH_SaliADH cd07105
Salicylaldehyde dehydrogenase, DoxF-like; Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2. ...
58-220 4.49e-31

Salicylaldehyde dehydrogenase, DoxF-like; Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.


Pssm-ID: 143423 [Multi-domain]  Cd Length: 432  Bit Score: 118.45  E-value: 4.49e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  58 DAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPiSDSLNIDVPGAAQALSWSGEAIDK 137
Cdd:cd07105     1 DADQAVEAAAAAFPA--WSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGAT-AAWAGFNVDLAAGMLREAASLITQ 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 138 IYDE-VAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGV 216
Cdd:cd07105    78 IIGGsIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGV 157

                  ....
gi 2585406586 217 FNVL 220
Cdd:cd07105   158 LNVV 161
PRK11904 PRK11904
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;
6-238 1.78e-30

bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;


Pssm-ID: 237017 [Multi-domain]  Cd Length: 1038  Bit Score: 118.76  E-value: 1.78e-30
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586    6 RADWEQRAKALKiegrAYINGEYTAA----VSGDTFECISPVDGR-LLATVASCDASDAQCAVENARATFNSgvWSRLAP 80
Cdd:PRK11904   533 RSELEPLAAAIA----AFLEKQWQAGpiinGEGEARPVVSPADRRrVVGEVAFADAEQVEQALAAARAAFPA--WSRTPV 606
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   81 AKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNiDVPgaaqalswsgEAID----------KIYDEVAATP---- 146
Cdd:PRK11904   607 EERAAILERAADLLEANRAELIALCVREAGKTLQDAIA-EVR----------EAVDfcryyaaqarRLFGAPEKLPgptg 675
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  147 -HDQLGLVTRepvGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGH 225
Cdd:PRK11904   676 eSNELRLHGR---GVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGA 752
                          250
                   ....*....|...
gi 2585406586  226 TVGNALAVHMDVD 238
Cdd:PRK11904   753 TVGAALTADPRIA 765
ALDH_BenzADH cd07152
NAD-dependent benzaldehyde dehydrogenase II-like; NAD-dependent, benzaldehyde dehydrogenase II ...
45-238 5.46e-30

NAD-dependent benzaldehyde dehydrogenase II-like; NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.


Pssm-ID: 143470 [Multi-domain]  Cd Length: 443  Bit Score: 115.85  E-value: 5.46e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  45 GRLLATVASCDASDAQCAVENARATfnSGVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnIDVPGA 124
Cdd:cd07152     1 GAVLGEVGVADAADVDRAAARAAAA--QRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAG-FEVGAA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 125 AQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTA-IRI 203
Cdd:cd07152    78 IGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGgVVI 157
                         170       180       190
                  ....*....|....*....|....*....|....*
gi 2585406586 204 AALAVEAGIPKGVFNVLPGyGHTVGNALAVHMDVD 238
Cdd:cd07152   158 ARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVA 191
ALDH_SSADH1_GabD1 cd07100
Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like; Succinate-semialdehyde ...
62-221 2.04e-29

Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like; Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.


Pssm-ID: 143418 [Multi-domain]  Cd Length: 429  Bit Score: 114.09  E-value: 2.04e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNiDVPGAAQALSW---SGEAIDKi 138
Cdd:cd07100     4 ALDRAHAAFLA--WRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYyaeNAEAFLA- 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 139 yDEVAATPHDQlGLVTREPVGVVGAIVPWNFPLmmacWK----LGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPK 214
Cdd:cd07100    80 -DEPIETDAGK-AYVRYEPLGVVLGIMPWNFPF----WQvfrfAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPE 153

                  ....*..
gi 2585406586 215 GVFNVLP 221
Cdd:cd07100   154 GVFQNLL 160
PRK10090 PRK10090
aldehyde dehydrogenase A; Provisional
91-238 5.18e-29

aldehyde dehydrogenase A; Provisional


Pssm-ID: 182233 [Multi-domain]  Cd Length: 409  Bit Score: 112.52  E-value: 5.18e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  91 AALLKANAEELALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIYDEVaaTPHDQLG---LVTREPVGVVGAIVPW 167
Cdd:PRK10090    5 AAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEI--IQSDRPGeniLLFKRALGVTTGILPW 81
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 168 NFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:PRK10090   82 NFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVA 152
PRK03137 PRK03137
1-pyrroline-5-carboxylate dehydrogenase; Provisional
20-237 5.52e-29

1-pyrroline-5-carboxylate dehydrogenase; Provisional


Pssm-ID: 179543  Cd Length: 514  Bit Score: 113.88  E-value: 5.52e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  20 GRAY---INGE--YTAavsgDTFECISPVD-GRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAAL 93
Cdd:PRK03137   34 GQDYpliIGGEriTTE----DKIVSINPANkSEVVGRVSKATKELAEKAMQAALEAFET--WKKWSPEDRARILLRAAAI 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  94 LKANAEELALLETLDMGKPIsdslnidvpgaAQALSWSGEAIDKI--YDEVAATPHDQLGLVTRE---------PVGVVG 162
Cdd:PRK03137  108 IRRRKHEFSAWLVKEAGKPW-----------AEADADTAEAIDFLeyYARQMLKLADGKPVESRPgehnryfyiPLGVGV 176
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2585406586 163 AIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDV 237
Cdd:PRK03137  177 VISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKT 251
PutA2 COG4230
Delta 1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism];
24-231 9.16e-29

Delta 1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism];


Pssm-ID: 443374 [Multi-domain]  Cd Length: 1156  Bit Score: 113.88  E-value: 9.16e-29
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   24 INGEytaAVSGDTFECISPVDGR-LLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:COG4230    562 IAGE---AASGEARPVRNPADHSdVVGTVVEATAADVEAALAAAQAAFPA--WSATPVEERAAILERAADLLEAHRAELM 636
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  103 LLETLDMGKPISDSLNiDVPgaaqalswsgEAID--KIY------DEVAATPHdqlglvtrEPVGVVGAIVPWNFPL--- 171
Cdd:COG4230    637 ALLVREAGKTLPDAIA-EVR----------EAVDfcRYYaaqarrLFAAPTVL--------RGRGVFVCISPWNFPLaif 697
                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2585406586  172 ---MMAcwklgpALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:COG4230    698 tgqVAA------ALAAGNTVLAKPAEQTPLIAARAVRLLHEAGVPADVLQLLPGDGETVGAAL 754
D1pyr5carbox3 TIGR01238
delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain); This model represents ...
24-234 3.59e-28

delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain); This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. [Energy metabolism, Amino acids and amines]


Pssm-ID: 273518 [Multi-domain]  Cd Length: 500  Bit Score: 111.54  E-value: 3.59e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  24 INGEYTAavSGDTFECISPVDGR-LLATVASCDASDAQCAVENARATFnsGVWSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:TIGR01238  42 IGHSYKA--DGEAQPVTNPADRRdIVGQVFHANLAHVQAAIDSAQQAF--PTWNATPAKERAAKLDRLADLLELHMPELM 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSLNiDVPGAAQALSWSGEAIDkiydevaatphDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPAL 182
Cdd:TIGR01238 118 ALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVR-----------DVLGEFSVESRGVFVCISPWNFPLAIFTGQISAAL 185
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 183 STGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVH 234
Cdd:TIGR01238 186 AAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSD 237
ALDH_SGSD_AstD cd07095
N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like; N-succinylglutamate ...
62-240 1.01e-27

N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like; N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


Pssm-ID: 143414 [Multi-domain]  Cd Length: 431  Bit Score: 109.28  E-value: 1.01e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLnidvpGAAQALswsgeaIDKI--- 138
Cdd:cd07095     5 AVAAARAAFPG--WAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQ-----TEVAAM------AGKIdis 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 139 ---YDEVA---ATPHDQLGLVTR-EPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAG 211
Cdd:cd07095    72 ikaYHERTgerATPMAQGRAVLRhRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAG 151
                         170       180
                  ....*....|....*....|....*....
gi 2585406586 212 IPKGVFNVLPGyGHTVGNALAVHMDVDTL 240
Cdd:cd07095   152 LPPGVLNLVQG-GRETGEALAAHEGIDGL 179
PRK11905 PRK11905
bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
31-231 1.01e-27

bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed


Pssm-ID: 237018 [Multi-domain]  Cd Length: 1208  Bit Score: 111.11  E-value: 1.01e-27
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   31 AVSGDTFECISPVD-GRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDM 109
Cdd:PRK11905   563 DVDGGTRPVLNPADhDDVVGTVTEASAEDVERALAAAQAAFPE--WSATPAAERAAILERAADLMEAHMPELFALAVREA 640
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  110 GKPISDslnidvpgaaqALSWSGEAID--KIY-DEVAATPHDQlglvTREPVGVVGAIVPWNFPLMMACWKLGPALSTGN 186
Cdd:PRK11905   641 GKTLAN-----------AIAEVREAVDflRYYaAQARRLLNGP----GHKPLGPVVCISPWNFPLAIFTGQIAAALVAGN 705
                          170       180       190       200
                   ....*....|....*....|....*....|....*....|....*....
gi 2585406586  187 SVILKPSEKSPLtairIAALAV----EAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:PRK11905   706 TVLAKPAEQTPL----IAARAVrllhEAGVPKDALQLLPGDGRTVGAAL 750
PLN02419 PLN02419
methylmalonate-semialdehyde dehydrogenase [acylating]
24-237 8.22e-27

methylmalonate-semialdehyde dehydrogenase [acylating]


Pssm-ID: 166060 [Multi-domain]  Cd Length: 604  Bit Score: 107.91  E-value: 8.22e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  24 INGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNsgVWSRLAPAKRKTVMIRFAALLKANAEELAL 103
Cdd:PLN02419  118 IGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFP--LWRNTPITTRQRVMLKFQELIRKNMDKLAM 195
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 104 LETLDMGKPISDS-------LNIDVPGAAQALSWSGEAIDKIYDEVaatphDQLGLvtREPVGVVGAIVPWNFPLMMACW 176
Cdd:PLN02419  196 NITTEQGKTLKDShgdifrgLEVVEHACGMATLQMGEYLPNVSNGV-----DTYSI--REPLGVCAGICPFNFPAMIPLW 268
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2585406586 177 KLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVgNALAVHMDV 237
Cdd:PLN02419  269 MFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTV-NAICDDEDI 328
ALDH_F7_AASADH cd07130
NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B; ...
23-238 6.91e-26

NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B; Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.


Pssm-ID: 143448  Cd Length: 474  Bit Score: 104.60  E-value: 6.91e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAavSGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNsgVWsRLAPA-KRKTVMIRFAALLKANAEEL 101
Cdd:cd07130     2 VYDGEWGG--GGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFK--EW-RDVPApKRGEIVRQIGDALRKKKEAL 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 102 ALLETLDMGKPISDSLN-----IDVPGAAQALSWSgeaidkIYDEVAAT--PHDQLgLVTREPVGVVGAIVPWNFPLMMA 174
Cdd:cd07130    77 GKLVSLEMGKILPEGLGevqemIDICDFAVGLSRQ------LYGLTIPSerPGHRM-MEQWNPLGVVGVITAFNFPVAVW 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2585406586 175 CWKLGPALSTGNSVILKPSEKSPLTAI---RIAALAVEA-GIPKGVFNVLPGyGHTVGNALAVHMDVD 238
Cdd:cd07130   150 GWNAAIALVCGNVVVWKPSPTTPLTAIavtKIVARVLEKnGLPGAIASLVCG-GADVGEALVKDPRVP 216
PLN00412 PLN00412
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
21-238 7.66e-26

NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional


Pssm-ID: 215110 [Multi-domain]  Cd Length: 496  Bit Score: 104.84  E-value: 7.66e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  21 RAYINGEYTAAVSGDTFECISPVDGRLLATVASCDASDAQCAVENARATfnSGVWSRLAPAKRKTVMIRFAALLKANAEE 100
Cdd:PLN00412   17 KYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAA--QKAWAKTPLWKRAELLHKAAAILKEHKAP 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 101 LALLETLDMGKPISDSLnIDVPGAAQALSWSGEAIDKIY--------DEVAATPHDQLGLVTREPVGVVGAIVPWNFPLM 172
Cdd:PLN00412   95 IAECLVKEIAKPAKDAV-TEVVRSGDLISYTAEEGVRILgegkflvsDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVN 173
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 173 MACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVHMDVD 238
Cdd:PLN00412  174 LAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVN 239
ALDH_P5CDH cd07083
ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like; ALDH ...
23-234 1.15e-25

ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like; ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.


Pssm-ID: 143402 [Multi-domain]  Cd Length: 500  Bit Score: 104.20  E-value: 1.15e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAavSGDTFECISPVD-GRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEEL 101
Cdd:cd07083    22 VIGGEWVD--TKERMVSVSPFApSEVVGTTAKADKAEAEAALEAAWAAFKT--WKDWPQEDRARLLLKAADLLRRRRREL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 102 ALLETLDMGKPISDSLN-----IDVP--GAAQALSWSGEAIdkiydEVAATPHDQLGLVTRePVGVVGAIVPWNFPLMMA 174
Cdd:cd07083    98 IATLTYEVGKNWVEAIDdvaeaIDFIryYARAALRLRYPAV-----EVVPYPGEDNESFYV-GLGAGVVISPWNFPVAIF 171
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 175 CWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVH 234
Cdd:cd07083   172 TGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEH 231
putA PRK11809
trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate ...
49-231 2.51e-22

trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed


Pssm-ID: 236989 [Multi-domain]  Cd Length: 1318  Bit Score: 95.43  E-value: 2.51e-22
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586   49 ATVASCDASdAQCAVENARatfnsgVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDslnidvpgaaqAL 128
Cdd:PRK11809   679 ATPAEVEQA-LESAVNAAP------IWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSN-----------AI 740
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  129 SWSGEAID--KIYdevAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL 206
Cdd:PRK11809   741 AEVREAVDflRYY---AGQVRDDFDNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRI 817
                          170       180
                   ....*....|....*....|....*
gi 2585406586  207 AVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:PRK11809   818 LLEAGVPAGVVQLLPGRGETVGAAL 842
ALDH_RL0313 cd07148
Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ...
38-215 4.29e-22

Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1; Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.


Pssm-ID: 143466 [Multi-domain]  Cd Length: 455  Bit Score: 94.02  E-value: 4.29e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  38 ECISPVDGRLLATVASCDASDAQCAVENARATF-NSGVWsrLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDS 116
Cdd:cd07148     2 EVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFlDRNNW--LPAHERIAILERLADLMEERADELALLIAREGGKPLVDA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 117 LnIDVPGAAQALSWSGEAIDK-----IYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILK 191
Cdd:cd07148    80 K-VEVTRAIDGVELAADELGQlggreIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVK 158
                         170       180
                  ....*....|....*....|....
gi 2585406586 192 PSEKSPLTAIRIAALAVEAGIPKG 215
Cdd:cd07148   159 PALATPLSCLAFVDLLHEAGLPEG 182
gabD1 PRK09406
succinic semialdehyde dehydrogenase; Reviewed
40-220 2.08e-19

succinic semialdehyde dehydrogenase; Reviewed


Pssm-ID: 181826 [Multi-domain]  Cd Length: 457  Bit Score: 86.33  E-value: 2.08e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISdSLNI 119
Cdd:PRK09406    6 INPATGETVKTFTALTDDEVDAAIARAHARFRD--YRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA-SAKA 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHD---QLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKS 196
Cdd:PRK09406   83 EALKCAKGFRYYAEHAEALLADEPADAAAvgaSRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162
                         170       180
                  ....*....|....*....|....
gi 2585406586 197 PLTAIRIAALAVEAGIPKGVFNVL 220
Cdd:PRK09406  163 PQTALYLADLFRRAGFPDGCFQTL 186
PRK13968 PRK13968
putative succinate semialdehyde dehydrogenase; Provisional
40-220 3.39e-19

putative succinate semialdehyde dehydrogenase; Provisional


Pssm-ID: 184426 [Multi-domain]  Cd Length: 462  Bit Score: 85.68  E-value: 3.39e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  40 ISPVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSlNI 119
Cdd:PRK13968   12 VNPATGEQLSVLPWAGADDIENALQLAAAGFRD--WRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQA-RA 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 120 DVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLT 199
Cdd:PRK13968   89 EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGC 168
                         170       180
                  ....*....|....*....|.
gi 2585406586 200 AIRIAALAVEAGIPKGVFNVL 220
Cdd:PRK13968  169 AQLIAQVFKDAGIPQGVYGWL 189
ALDH_KGSADH-like cd07084
ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant ...
73-238 5.34e-17

ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like; ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.


Pssm-ID: 143403 [Multi-domain]  Cd Length: 442  Bit Score: 79.20  E-value: 5.34e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  73 GVWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNIDVPGAA----QALSWSGEAIDKIYDEVAATPHD 148
Cdd:cd07084    13 KAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWMFAENICGDQVQlrarAFVIYSYRIPHEPGNHLGQGLKQ 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 149 QLGLVtREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGI-PKGVFNVLPGYGHTv 227
Cdd:cd07084    93 QSHGY-RWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLlPPEDVTLINGDGKT- 170
                         170
                  ....*....|.
gi 2585406586 228 GNALAVHMDVD 238
Cdd:cd07084   171 MQALLLHPNPK 181
ALDH_F14-YMR110C cd07135
Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins; Aldehyde ...
62-222 7.64e-17

Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins; Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.


Pssm-ID: 143453 [Multi-domain]  Cd Length: 436  Bit Score: 78.80  E-value: 7.64e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSGvwsRLAP-AKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNIDVPGAAQALSWSGEAIDK-IY 139
Cdd:cd07135    10 IHSRLRATFRSG---KTKDlEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKwAK 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 140 DEVAATPHDQLGL----VTREPVGVVGAIVPWNFPLMMAcwkLGP---ALSTGNSVILKPSEKSPLTAIRIAALaVEAGI 212
Cdd:cd07135    87 DEKVKDGPLAFMFgkprIRKEPLGVVLIIGPWNYPVLLA---LSPlvgAIAAGCTVVLKPSELTPHTAALLAEL-VPKYL 162
                         170
                  ....*....|
gi 2585406586 213 PKGVFNVLPG 222
Cdd:cd07135   163 DPDAFQVVQG 172
ALDH_F15-22 cd07098
Aldehyde dehydrogenase family 15A1 and 22A1-like; Aldehyde dehydrogenase family members ...
42-241 5.03e-15

Aldehyde dehydrogenase family 15A1 and 22A1-like; Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.


Pssm-ID: 143416 [Multi-domain]  Cd Length: 465  Bit Score: 73.49  E-value: 5.03e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  42 PVDGRLLATVASCDASDAQCAVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSLNIDV 121
Cdd:cd07098     3 PATGQHLGSVPADTPEDVDEAIAAARAAQRE--WAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 122 PGAAQALSWSgeaIDkiYDEVAATPHDQLG---------LVTREPVGVVGAIVPWNFPLMMAcwkLGPALS---TGNSVI 189
Cdd:cd07098    81 LVTCEKIRWT---LK--HGEKALRPESRPGgllmfykraRVEYEPLGVVGAIVSWNYPFHNL---LGPIIAalfAGNAIV 152
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 190 LKPSE-----KSPLTAIRIAALAvEAGIPKGVFNVLPGYGHTvGNALAVHMDVDTLV 241
Cdd:cd07098   153 VKVSEqvawsSGFFLSIIRECLA-ACGHDPDLVQLVTCLPET-AEALTSHPVIDHIT 207
ALDH_F3-13-14_CALDH-like cd07087
ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other ...
62-222 5.05e-15

ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins; ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.


Pssm-ID: 143406 [Multi-domain]  Cd Length: 426  Bit Score: 73.33  E-value: 5.05e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSGvwsRLAPAK-RKTVMIRFAALLKANAEEL--ALLEtlDMGKPISDSLNIDVPGAAQALSwsgEAIDKI 138
Cdd:cd07087     3 LVARLRETFLTG---KTRSLEwRKAQLKALKRMLTENEEEIaaALYA--DLGKPPAEAYLTEIAVVLGEID---HALKHL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 139 YD-----EVAATPHDQLG--LVTREPVGVVGAIVPWNFPLMMAcwkLGP---ALSTGNSVILKPSEKSPLTAIRIAALaV 208
Cdd:cd07087    75 KKwmkprRVSVPLLLQPAkaYVIPEPLGVVLIIGPWNYPLQLA---LAPligAIAAGNTVVLKPSELAPATSALLAKL-I 150
                         170
                  ....*....|....
gi 2585406586 209 EAGIPKGVFNVLPG 222
Cdd:cd07087   151 PKYFDPEAVAVVEG 164
ALDH_F4-17_P5CDH cd07123
Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17; Delta(1) ...
11-234 4.46e-14

Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17; Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.


Pssm-ID: 143441 [Multi-domain]  Cd Length: 522  Bit Score: 70.69  E-value: 4.46e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  11 QRAKALKIEGRAYINGE--YTaavsGDTFECISPVD-GRLLATVASCDASDAQCAVENARATfnSGVWSRLAPAKRKTVM 87
Cdd:cd07123    24 AELKSLTVEIPLVIGGKevRT----GNTGKQVMPHDhAHVLATYHYADAALVEKAIEAALEA--RKEWARMPFEDRAAIF 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  88 IRFAALLKANAEELALLET-LDMGKPISDSlNIDVpgAAqalswsgEAID----------KIY-DEVAATPHDQLGLVTR 155
Cdd:cd07123    98 LKAADLLSGKYRYELNAATmLGQGKNVWQA-EIDA--AC-------ELIDflrfnvkyaeELYaQQPLSSPAGVWNRLEY 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 156 EPV-GVVGAIVPWNFPLMMACWKLGPALsTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNALAVH 234
Cdd:cd07123   168 RPLeGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLAS 246
ALDH_CALDH_CalB cd07133
Coniferyl aldehyde dehydrogenase-like; Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) ...
153-206 4.56e-14

Coniferyl aldehyde dehydrogenase-like; Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.


Pssm-ID: 143451 [Multi-domain]  Cd Length: 434  Bit Score: 70.59  E-value: 4.56e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2585406586 153 VTREPVGVVGAIVPWNFPLMMAcwkLGP---ALSTGNSVILKPSEKSPLTAIRIAAL 206
Cdd:cd07133    97 VEYQPLGVVGIIVPWNYPLYLA---LGPliaALAAGNRVMIKPSEFTPRTSALLAEL 150
PTZ00381 PTZ00381
aldehyde dehydrogenase family protein; Provisional
55-231 9.48e-13

aldehyde dehydrogenase family protein; Provisional


Pssm-ID: 240392  Cd Length: 493  Bit Score: 66.98  E-value: 9.48e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  55 DASDAQCAVENARATFNSGVWSRLApaKRKTVMIRFAALLKANAEELALLETLDMGKP--ISDSLNIDVP-GAAQAL--- 128
Cdd:PTZ00381    5 NPEIIPPIVKKLKESFLTGKTRPLE--FRKQQLRNLLRMLEENKQEFSEAVHKDLGRHpfETKMTEVLLTvAEIEHLlkh 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 129 --SWSGEaiDKIYDEVAATPHDqlGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL 206
Cdd:PTZ00381   83 ldEYLKP--EKVDTVGVFGPGK--SYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKL 158
                         170       180
                  ....*....|....*....|....*
gi 2585406586 207 aVEAGIPKGVFNVLPGyGHTVGNAL 231
Cdd:PTZ00381  159 -LTKYLDPSYVRVIEG-GVEVTTEL 181
ALDH_AlkH-like cd07134
Pseudomonas putida Aldehyde dehydrogenase AlkH-like; Aldehyde dehydrogenase AlkH (locus name ...
156-217 9.74e-12

Pseudomonas putida Aldehyde dehydrogenase AlkH-like; Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.


Pssm-ID: 143452 [Multi-domain]  Cd Length: 433  Bit Score: 63.78  E-value: 9.74e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 156 EPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVF 217
Cdd:cd07134    99 EPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEVA 160
ALDH_F3AB cd07132
Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins; NAD(P)+-dependent, ...
62-214 1.86e-11

Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins; NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.


Pssm-ID: 143450 [Multi-domain]  Cd Length: 443  Bit Score: 63.01  E-value: 1.86e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSGvwsRLAPAK-RKTVMIRFAALLKANAEELalLETL--DMGKPISDSLNIDVPGAAQALSwsgEAIDKI 138
Cdd:cd07132     3 AVRRAREAFSSG---KTRPLEfRIQQLEALLRMLEENEDEI--VEALakDLRKPKFEAVLSEILLVKNEIK---YAISNL 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 139 yDEVAATPHDQLGLVT--------REPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALavea 210
Cdd:cd07132    75 -PEWMKPEPVKKNLATllddvyiyKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL---- 149

                  ....
gi 2585406586 211 gIPK 214
Cdd:cd07132   150 -IPK 152
PLN02315 PLN02315
aldehyde dehydrogenase family 7 member
22-233 1.21e-10

aldehyde dehydrogenase family 7 member


Pssm-ID: 177949  Cd Length: 508  Bit Score: 60.62  E-value: 1.21e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  22 AYINGEYTAavSGDTFECISPVDGRLLATVASCDASDAQcavENARATFNSG-VWSRLAPAKRKTVMIRFAALLKANAEE 100
Cdd:PLN02315   23 CYVGGEWRA--NGPLVSSVNPANNQPIAEVVEASLEDYE---EGLRACEEAAkIWMQVPAPKRGEIVRQIGDALRAKLDY 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 101 LALLETLDMGKPISDSLN-----IDVPGAAQALS--WSGEAIdkiydevAATPHDQLGLVTREPVGVVGAIVPWNFPLMM 173
Cdd:PLN02315   98 LGRLVSLEMGKILAEGIGevqeiIDMCDFAVGLSrqLNGSII-------PSERPNHMMMEVWNPLGIVGVITAFNFPCAV 170
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2585406586 174 ACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEA----GIPKGVFNVLPGyGHTVGNALAV 233
Cdd:PLN02315  171 LGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVleknNLPGAIFTSFCG-GAEIGEAIAK 233
ALDH_F3FHI cd07137
Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins; Aldehyde ...
63-215 1.58e-10

Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins; Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.


Pssm-ID: 143455 [Multi-domain]  Cd Length: 432  Bit Score: 60.12  E-value: 1.58e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  63 VENARATFNSGvwsRLAPAK-RKTVMIRFAALLKANaeELALLETL--DMGKPISDS----LNIDVPGAAQALS----WS 131
Cdd:cd07137     5 VRELRETFRSG---RTRSAEwRKSQLKGLLRLVDEN--EDDIFAALrqDLGKPSAESfrdeVSVLVSSCKLAIKelkkWM 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 132 geAIDKIYDEVAATPHDqlGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL----- 206
Cdd:cd07137    80 --APEKVKTPLTTFPAK--AEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLipeyl 155
                         170
                  ....*....|....*
gi 2585406586 207 ------AVEAGIPKG 215
Cdd:cd07137   156 dtkaikVIEGGVPET 170
PLN02203 PLN02203
aldehyde dehydrogenase
63-214 3.03e-09

aldehyde dehydrogenase


Pssm-ID: 165847 [Multi-domain]  Cd Length: 484  Bit Score: 56.66  E-value: 3.03e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  63 VENARATFNSGVWSRLApaKRKTVMIRFAALLKANAEEL--ALLEtlDMGK----PISDSLNIDVPGAAQALSWSGE--A 134
Cdd:PLN02203   12 VAELRETYESGRTRSLE--WRKSQLKGLLRLLKDNEEAIfkALHQ--DLGKhrveAYRDEVGVLTKSANLALSNLKKwmA 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 135 IDKIYDEVAATPHDqlGLVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAiriAALAveAGIPK 214
Cdd:PLN02203   88 PKKAKLPLVAFPAT--AEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATS---AFLA--ANIPK 160
ALDH_YwdH-P39616 cd07136
Bacillus subtilis aldehyde dehydrogenase ywdH-like; Uncharacterized Bacillus subtilis ywdH ...
151-231 6.41e-09

Bacillus subtilis aldehyde dehydrogenase ywdH-like; Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.


Pssm-ID: 143454 [Multi-domain]  Cd Length: 449  Bit Score: 55.59  E-value: 6.41e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 151 GLVTREPVGVVGAIVPWNFPLMMAcwkLGP---ALSTGNSVILKPSEKSPLTAIRIAALaVEAGIPKGVFNVLPGyGHTV 227
Cdd:cd07136    94 SYIYYEPYGVVLIIAPWNYPFQLA---LAPligAIAAGNTAVLKPSELTPNTSKVIAKI-IEETFDEEYVAVVEG-GVEE 168

                  ....
gi 2585406586 228 GNAL 231
Cdd:cd07136   169 NQEL 172
ALDH_KGSADH cd07129
Alpha-Ketoglutaric Semialdehyde Dehydrogenase; Alpha-Ketoglutaric Semialdehyde (KGSA) ...
62-234 3.25e-07

Alpha-Ketoglutaric Semialdehyde Dehydrogenase; Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.


Pssm-ID: 143447 [Multi-domain]  Cd Length: 454  Bit Score: 50.23  E-value: 3.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  62 AVENARATFNSgvWSRLAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISdSLNIDVP-------GAAQAL---SWS 131
Cdd:cd07129     4 AAAAAAAAFES--YRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA-RLQGELGrttgqlrLFADLVregSWL 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 132 GEAIDKIYDEVAATPHDQLGLVtREPVGVVGAIVPWNFPLmmACWKLG----PALSTGNSVILKPSEKSPLTAIRIAALA 207
Cdd:cd07129    81 DARIDPADPDRQPLPRPDLRRM-LVPLGPVAVFGASNFPL--AFSVAGgdtaSALAAGCPVVVKAHPAHPGTSELVARAI 157
                         170       180       190
                  ....*....|....*....|....*....|.
gi 2585406586 208 VEA----GIPKGVFNVLPGYGHTVGNALAVH 234
Cdd:cd07129   158 RAAlratGLPAGVFSLLQGGGREVGVALVKH 188
PRK11903 PRK11903
3,4-dehydroadipyl-CoA semialdehyde dehydrogenase;
23-222 1.82e-06

3,4-dehydroadipyl-CoA semialdehyde dehydrogenase;


Pssm-ID: 237016 [Multi-domain]  Cd Length: 521  Bit Score: 48.16  E-value: 1.82e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvSGDTFECISPVDGRLLATVAScDASDAQCAVENARATFNSGVwSRLAPAKRKTVMIRFAALLKANAEELA 102
Cdd:PRK11903    8 YVAGRWQAG-SGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAAL-RALTYAQRAALLAAIVKVLQANRDAYY 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLETLDMGKPISDSlNIDVPGAAQALSWSGEAIDKIYDEVAATPHDQLGLvTREPV-----------GVVGAIVPWNFPL 171
Cdd:PRK11903   85 DIATANSGTTRNDS-AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQL-GKDPAfqgqhvlvptrGVALFINAFNFPA 162
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2585406586 172 MMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGI-PKGVFNVLPG 222
Cdd:PRK11903  163 WGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGIlPAGALSVVCG 214
PLN02174 PLN02174
aldehyde dehydrogenase family 3 member H1
153-206 1.94e-06

aldehyde dehydrogenase family 3 member H1


Pssm-ID: 177831  Cd Length: 484  Bit Score: 48.12  E-value: 1.94e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....
gi 2585406586 153 VTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL 206
Cdd:PLN02174  108 IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKL 161
ALDH_MaoC-N cd07128
N-terminal domain of the monoamine oxidase C dehydratase; The N-terminal domain of the MaoC ...
23-222 9.18e-06

N-terminal domain of the monoamine oxidase C dehydratase; The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.


Pssm-ID: 143446 [Multi-domain]  Cd Length: 513  Bit Score: 46.11  E-value: 9.18e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvSGDTFECISPVDGRLLATVAScDASDAQCAVENARATfnsGvwsrlAPAKRKTVMIRFAALLKANAeeLA 102
Cdd:cd07128     4 YVAGQWHAG-TGDGRTLHDAVTGEVVARVSS-EGLDFAAAVAYAREK---G-----GPALRALTFHERAAMLKALA--KY 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 103 LLE--------TLDMGKPISDSLnIDVPGAAQAL-SWSGEAIDKIYDEVAAT--PHDQLG----------LVTREPVGVv 161
Cdd:cd07128    72 LMErkedlyalSAATGATRRDSW-IDIDGGIGTLfAYASLGRRELPNAHFLVegDVEPLSkdgtfvgqhiLTPRRGVAV- 149
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2585406586 162 gAIVPWNFPlmmaCW----KLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGI-PKGVFNVLPG 222
Cdd:cd07128   150 -HINAFNFP----VWgmleKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLlPEGALQLICG 210
ALDH-like cd07077
NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family; The aldehyde ...
78-241 1.09e-05

NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family; The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.


Pssm-ID: 143396 [Multi-domain]  Cd Length: 397  Bit Score: 45.68  E-value: 1.09e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  78 LAPAKRKTVMIRFAALLKANAEELALLETLDMGKPISDSlnidvpgAAQALSWSGEAIDKIYDEVAA------------- 144
Cdd:cd07077    13 NHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSL-------IANWIAMMGCSESKLYKNIDTergitasvghiqd 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 145 -TPHDQLGLVTR-EPVGVVGAIVPWNFPLMmACWKLGPALSTGNSVILKPSEKSPLTAiRIAAL----AVEAGIPKGVFN 218
Cdd:cd07077    86 vLLPDNGETYVRaFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTN-RALALlfqaADAAHGPKILVL 163
                         170       180
                  ....*....|....*....|...
gi 2585406586 219 VLPGYGHTVGNALAVHMDVDTLV 241
Cdd:cd07077   164 YVPHPSDELAEELLSHPKIDLIV 186
ALDH_F12_P5CDH cd07126
Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12; Delta(1) ...
23-231 2.44e-05

Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12; Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.


Pssm-ID: 143444  Cd Length: 489  Bit Score: 44.79  E-value: 2.44e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  23 YINGEYTAAvsGDTFECISPVDGRLLATVASCDASDAQCAVENARATFNSGVWSRLAPAKR----KTVMIRFAALLKANA 98
Cdd:cd07126     2 LVAGKWKGA--SNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERyllyGDVSHRVAHELRKPE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586  99 EELALLETLDMGKPISDslnidvpgaAQALswsGEAI--DKIYDEVA-----------ATPHDQLGLV---TREPVGVVG 162
Cdd:cd07126    80 VEDFFARLIQRVAPKSD---------AQAL---GEVVvtRKFLENFAgdqvrflarsfNVPGDHQGQQssgYRWPYGPVA 147
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2585406586 163 AIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAALAVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:cd07126   148 IITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKIL 216
ALDH_F20_ACDH cd07122
Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Coenzyme A acylating ...
156-241 1.63e-04

Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like; Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.


Pssm-ID: 143440 [Multi-domain]  Cd Length: 436  Bit Score: 42.09  E-value: 1.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 156 EPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL----AVEAGIPKGVFNVLPGYGHTVGNAL 231
Cdd:cd07122    94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKImreaAVAAGAPEGLIQWIEEPSIELTQEL 173
                          90
                  ....*....|
gi 2585406586 232 AVHMDVDTLV 241
Cdd:cd07122   174 MKHPDVDLIL 183
ALDH_F20_ACDH_EutE-like cd07081
Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and ...
152-241 1.22e-03

Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins; Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.


Pssm-ID: 143400 [Multi-domain]  Cd Length: 439  Bit Score: 39.56  E-value: 1.22e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 152 LVTREPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPSEKSPLTAIRIAAL----AVEAGIPKGVFNVLPGYGHTV 227
Cdd:cd07081    90 LIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLllqaAVAAGAPENLIGWIDNPSIEL 169
                          90
                  ....*....|....
gi 2585406586 228 GNALAVHMDVDTLV 241
Cdd:cd07081   170 AQRLMKFPGIGLLL 183
PRK13805 PRK13805
bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
148-239 1.44e-03

bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional


Pssm-ID: 237515 [Multi-domain]  Cd Length: 862  Bit Score: 39.40  E-value: 1.44e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2585406586 148 DQLGLVT-REPVGVVGAIVPWNFPLMMACWKLGPALSTGNSVILKPS---EKSPLTAIRIA-ALAVEAGIPKGVFNVLPG 222
Cdd:PRK13805   98 DEFGIIEiAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHpraQKSSIAAAKIVlDAAVAAGAPKDIIQWIEE 177
                          90
                  ....*....|....*..
gi 2585406586 223 YGHTVGNALAVHMDVDT 239
Cdd:PRK13805  178 PSVELTNALMNHPGIAL 194
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH