|
Name |
Accession |
Description |
Interval |
E-value |
| YegV_kinase_like |
cd01944 |
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase ... |
6-292 |
6.85e-67 |
|
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Pssm-ID: 238919 [Multi-domain] Cd Length: 289 Bit Score: 210.74 E-value: 6.85e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 6 RLIHTGQALVDVLVDVPHLPRRGGNVMATSYTRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSA 85
Cdd:cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGGGFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGIEILL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 86 ARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSLALP-ATRDPLLAWLDTLPAGVGVV 164
Cdd:cd01944 81 PPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFATLTVAPYDYVYLSGYTLASEnASKVILLEWLEALPAGTTLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 165 LDPGAVFAELDESVRTHMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERLRPGTVVITRDGPAGCAV-LADGSAREIP 243
Cdd:cd01944 161 FDPGPRISDIPDTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIYAKTAAPVVVRLGSNGAWIrLPDGNTHIIP 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2644508497 244 GFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRG 292
Cdd:cd01944 241 GFKVKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
|
|
| RbsK |
COG0524 |
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ... |
6-302 |
1.54e-58 |
|
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis
Pssm-ID: 440290 [Multi-domain] Cd Length: 301 Bit Score: 189.71 E-value: 1.54e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 6 RLIHTGQALVDVLVDVPHLPRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMS 84
Cdd:COG0524 1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGaAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 85 A-ARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSLALPATRDPLLAWLDTL-PAGVG 162
Cdd:COG0524 81 GvRRDPGAPTGLAFILVDPDGERTIVFYRGANAELTPEDLDEALLAGADILHLGGITLASEPPREALLAALEAArAAGVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 163 VVLDPGAVFAELDESVRT--HMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERlRPGTVVITRdGPAGCAVLADGSAR 240
Cdd:COG0524 161 VSLDPNYRPALWEPARELlrELLALVDILFPNEEEAELLTGETDPEEAAAALLAR-GVKLVVVTL-GAEGALLYTGGEVV 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2644508497 241 EIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPIAA-PNAAEI 302
Cdd:COG0524 239 HVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPAlPTREEV 301
|
|
| PfkB |
pfam00294 |
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ... |
11-295 |
1.27e-28 |
|
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.
Pssm-ID: 425587 [Multi-domain] Cd Length: 294 Bit Score: 111.28 E-value: 1.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSYTrHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGV-AMSAARVP 89
Cdd:pfam00294 6 GEANIDLIGNVEGLPGELVRVSTVEKG-PGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVdTDYVVIDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 90 DADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSP--RPGDMVCVTGySLALPATRDPLLAWLDTLPAG---VGVV 164
Cdd:pfam00294 85 DTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEENEDllENADLLYISG-SLPLGLPEATLEELIEAAKNGgtfDPNL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 165 LDP-GAVFAELDesvrtHMIDHTTVWTGNAEESAALGGV--GDMVGSLHACAERLRPG--TVVITRdGPAGCAVLADGSA 239
Cdd:pfam00294 164 LDPlGAAREALL-----ELLPLADLLKPNEEELEALTGAklDDIEEALAALHKLLAKGikTVIVTL-GADGALVVEGDGE 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2644508497 240 REIPGFP-QQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPIA 295
Cdd:pfam00294 238 VHVPAVPkVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQT 294
|
|
| D_ribokin_bact |
TIGR02152 |
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ... |
11-292 |
1.05e-20 |
|
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]
Pssm-ID: 274000 [Multi-domain] Cd Length: 293 Bit Score: 89.97 E-value: 1.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSY-TRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAAR-V 88
Cdd:TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFqIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGtV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 PDADTGVCLVLLDPSAERTFITTTGAERAVSIDsfgtssprpgdmvcVTGYSLALPATRDPLLAWLDTLP---------- 158
Cdd:TIGR02152 81 KDTPTGTAFITVDDTGENRIVVVAGANAELTPE--------------DIDAAEALIAESDIVLLQLEIPLetvleaakia 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 159 --AGVGVVLDPGAVFAELDESvrthMIDHTTVWTGNAEESAALGGVG-DMVGSLHACAERLR---PGTVVITRdGPAGCA 232
Cdd:TIGR02152 147 kkHGVKVILNPAPAIKDLDDE----LLSLVDIITPNETEAEILTGIEvTDEEDAEKAAEKLLekgVKNVIITL-GSKGAL 221
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 233 VLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRG 292
Cdd:TIGR02152 222 LVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKG 281
|
|
| PLN02813 |
PLN02813 |
pfkB-type carbohydrate kinase family protein |
11-270 |
1.87e-20 |
|
pfkB-type carbohydrate kinase family protein
Pssm-ID: 215434 [Multi-domain] Cd Length: 426 Bit Score: 90.64 E-value: 1.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDV--LVDVPHLPRRG--------------GNVMAT----SYTRHAGGAV-NILVAAARSGGQAVH--------AG 61
Cdd:PLN02813 76 GQAMVDFsgMVDDEFLERLGlekgtrkvinheerGKVLRAldgcSYKASAGGSLsNTLVALARLGSQSAAgpalnvamAG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 62 AIGTGPNGDLISTTLAEEGVAMSAARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSL 141
Cdd:PLN02813 156 SVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCLASAISKSRVLVVEGYLW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 142 ALPATRDPLL-AWLDTLPAGVGVVL---DPGAVFAELDESVRThMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERLR 217
Cdd:PLN02813 236 ELPQTIEAIAqACEEAHRAGALVAVtasDVSCIERHRDDFWDV-MGNYADILFANSDEARALCGLGSEESPESATRYLSH 314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2644508497 218 PGTVVITRDGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:PLN02813 315 FCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRG 367
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| YegV_kinase_like |
cd01944 |
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase ... |
6-292 |
6.85e-67 |
|
YegV-like sugar kinase. Found only in bacteria, YegV-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Pssm-ID: 238919 [Multi-domain] Cd Length: 289 Bit Score: 210.74 E-value: 6.85e-67
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 6 RLIHTGQALVDVLVDVPHLPRRGGNVMATSYTRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSA 85
Cdd:cd01944 1 KVLVIGAAVVDIVLDVDKLPASGGDIEAKSKSYVIGGGFNVMVAASRLGIPTVNAGPLGNGNWADQIRQAMRDEGIEILL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 86 ARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSLALP-ATRDPLLAWLDTLPAGVGVV 164
Cdd:cd01944 81 PPRGGDDGGCLVALVEPDGERSFISISGAEQDWSTEWFATLTVAPYDYVYLSGYTLASEnASKVILLEWLEALPAGTTLV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 165 LDPGAVFAELDESVRTHMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERLRPGTVVITRDGPAGCAV-LADGSAREIP 243
Cdd:cd01944 161 FDPGPRISDIPDTILQALMAKRPIWSCNREEAAIFAERGDPAAEASALRIYAKTAAPVVVRLGSNGAWIrLPDGNTHIIP 240
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2644508497 244 GFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRG 292
Cdd:cd01944 241 GFKVKAVDTIGAGDTHAGGMLAGLAKGMSLADAVLLANAAAAIVVTRSG 289
|
|
| RbsK |
COG0524 |
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ... |
6-302 |
1.54e-58 |
|
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis
Pssm-ID: 440290 [Multi-domain] Cd Length: 301 Bit Score: 189.71 E-value: 1.54e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 6 RLIHTGQALVDVLVDVPHLPRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMS 84
Cdd:COG0524 1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGaAANVAVALARLGARVALVGAVGDDPFGDFLLAELRAEGVDTS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 85 A-ARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSLALPATRDPLLAWLDTL-PAGVG 162
Cdd:COG0524 81 GvRRDPGAPTGLAFILVDPDGERTIVFYRGANAELTPEDLDEALLAGADILHLGGITLASEPPREALLAALEAArAAGVP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 163 VVLDPGAVFAELDESVRT--HMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERlRPGTVVITRdGPAGCAVLADGSAR 240
Cdd:COG0524 161 VSLDPNYRPALWEPARELlrELLALVDILFPNEEEAELLTGETDPEEAAAALLAR-GVKLVVVTL-GAEGALLYTGGEVV 238
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2644508497 241 EIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPIAA-PNAAEI 302
Cdd:COG0524 239 HVPAFPVEVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAAAALVVTRPGAQPAlPTREEV 301
|
|
| PfkB |
pfam00294 |
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ... |
11-295 |
1.27e-28 |
|
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.
Pssm-ID: 425587 [Multi-domain] Cd Length: 294 Bit Score: 111.28 E-value: 1.27e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSYTrHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGV-AMSAARVP 89
Cdd:pfam00294 6 GEANIDLIGNVEGLPGELVRVSTVEKG-PGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKKEGVdTDYVVIDE 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 90 DADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSP--RPGDMVCVTGySLALPATRDPLLAWLDTLPAG---VGVV 164
Cdd:pfam00294 85 DTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEENEDllENADLLYISG-SLPLGLPEATLEELIEAAKNGgtfDPNL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 165 LDP-GAVFAELDesvrtHMIDHTTVWTGNAEESAALGGV--GDMVGSLHACAERLRPG--TVVITRdGPAGCAVLADGSA 239
Cdd:pfam00294 164 LDPlGAAREALL-----ELLPLADLLKPNEEELEALTGAklDDIEEALAALHKLLAKGikTVIVTL-GADGALVVEGDGE 237
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 2644508497 240 REIPGFP-QQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPIA 295
Cdd:pfam00294 238 VHVPAVPkVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAAALVVQKSGAQT 294
|
|
| KdgK |
cd01166 |
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form ... |
33-294 |
6.74e-26 |
|
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.
Pssm-ID: 238571 [Multi-domain] Cd Length: 294 Bit Score: 104.19 E-value: 6.74e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 33 ATSYTRHAGGA-VNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARV-PDADTGVCLVLLDPSAERTFIT 110
Cdd:cd01166 23 ADSFRKFFGGAeANVAVGLARLGHRVALVTAVGDDPFGRFILAELRREGVDTSHVRVdPGRPTGLYFLEIGAGGERRVLY 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 111 TTG--AERAVSIDSFGTSSPRPGDMVCVTGYSLAL-PATRDPLLAWLDTLPA-GVGVVLDPG--AVFAELDE--SVRTHM 182
Cdd:cd01166 103 YRAgsAASRLTPEDLDEAALAGADHLHLSGITLALsESAREALLEALEAAKArGVTVSFDLNyrPKLWSAEEarEALEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 183 IDHTTVWTGNAEESAALGGVGDMVGSLHACAERLRPGTVVITRDGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGA 262
Cdd:cd01166 183 LPYVDIVLPSEEEAEALLGDEDPTDAAERALALALGVKAVVVKLGAEGALVYTGGGRVFVPAYPVEVVDTTGAGDAFAAG 262
|
250 260 270
....*....|....*....|....*....|..
gi 2644508497 263 MIAARLAGLTWHEAARWGNAAAAIKVTRRGPI 294
Cdd:cd01166 263 FLAGLLEGWDLEEALRFANAAAALVVTRPGDI 294
|
|
| ribokinase |
cd01174 |
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ... |
11-292 |
6.83e-25 |
|
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.
Pssm-ID: 238579 [Multi-domain] Cd Length: 292 Bit Score: 101.09 E-value: 6.83e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSA-ARV 88
Cdd:cd01174 6 GSINVDLVTRVDRLPKPGETVLGSSFETGPGGkGANQAVAAARLGARVAMIGAVGDDAFGDELLENLREEGIDVSYvEVV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 PDADTGVCLVLLDPSAERTFITTTGAERAVS---IDSFGTSSPRPGdmVCVTGYSLALPATRDpllAWLDTLPAGVGVVL 165
Cdd:cd01174 86 VGAPTGTAVITVDESGENRIVVVPGANGELTpadVDAALELIAAAD--VLLLQLEIPLETVLA---ALRAARRAGVTVIL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 166 DPGAVFAELDEsvrthMIDHTTVWTGNAEESAALGG--VGDMVGSLHACAERLRPG--TVVITRdGPAGCAVLADGSARE 241
Cdd:cd01174 161 NPAPARPLPAE-----LLALVDILVPNETEAALLTGieVTDEEDAEKAARLLLAKGvkNVIVTL-GAKGALLASGGEVEH 234
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2644508497 242 IPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRG 292
Cdd:cd01174 235 VPAFKVKAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAAALSVTRPG 285
|
|
| adenosine_kinase |
cd01168 |
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside ... |
11-273 |
2.78e-24 |
|
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.
Pssm-ID: 238573 [Multi-domain] Cd Length: 312 Bit Score: 100.00 E-value: 2.78e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVP-----------------HLPRRGGNVMATSYTRHAGGAV-NILVAAARSGGQAVHAGAIGTGPNGDLI 72
Cdd:cd01168 8 GNALVDILAQVDdafleklglkkgdmilaDMEEQEELLAKLPVKYIAGGSAaNTIRGAAALGGSAAFIGRVGDDKLGDFL 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 73 STTLAEEGVAMSAARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSLALPATRDPLLA 152
Cdd:cd01168 88 LKDLRAAGVDTRYQVQPDGPTGTCAVLVTPDAERTMCTYLGAANELSPDDLDWSLLAKAKYLYLEGYLLTVPPEAILLAA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 153 WLDTLpAGVGVVLDPGAVF------AELDEsvrthMIDHTTVWTGNAEESAALGGVGdmVGSLHACAERL---RPGTVVI 223
Cdd:cd01168 168 EHAKE-NGVKIALNLSAPFivqrfkEALLE-----LLPYVDILFGNEEEAEALAEAE--TTDDLEAALKLlalRCRIVVI 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 2644508497 224 TRdGPAGCAVLADGSAREIPGFPQ-QAVDTNGAGDVHTGAMIAARLAGLTW 273
Cdd:cd01168 240 TQ-GAKGAVVVEGGEVYPVPAIPVeKIVDTNGAGDAFAGGFLYGLVQGEPL 289
|
|
| ribokinase_group_A |
cd01942 |
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ... |
6-294 |
1.24e-22 |
|
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Pssm-ID: 238917 [Multi-domain] Cd Length: 279 Bit Score: 94.69 E-value: 1.24e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 6 RLIHTGQALVDVLVDVPHLPRRGGNVMATS-YTRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMS 84
Cdd:cd01942 1 DVAVVGHLNYDIILKVESFPGPFESVLVKDlRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEGVDTS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 85 AAR-VPDADTGVCLVLLDPSAERTFITTTGAERAVSIDsfgTSSPRPGDMVCVTgyslalPATRDPLLAW-LDTLPAGVG 162
Cdd:cd01942 81 HVRvVDEDSTGVAFILTDGDDNQIAYFYPGAMDELEPN---DEADPDGLADIVH------LSSGPGLIELaRELAAGGIT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 163 VVLDPGAVFAELDESVRTHMIDHTTVWTGNAEESAALGgvgDMVGsLHACAERLRPGTVVITRdGPAGCAVLADGSAREI 242
Cdd:cd01942 152 VSFDPGQELPRLSGEELEEILERADILFVNDYEAELLK---ERTG-LSEAELASGVRVVVVTL-GPKGAIVFEDGEEVEV 226
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2644508497 243 PGFP-QQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPI 294
Cdd:cd01942 227 PAVPaVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAASLKVERRGAQ 279
|
|
| D_ribokin_bact |
TIGR02152 |
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose ... |
11-292 |
1.05e-20 |
|
ribokinase; This model describes ribokinase, an enzyme catalyzing the first step in ribose catabolism. The rbsK gene encoding ribokinase typically is found with ribose transport genes. Ribokinase belongs to the carbohydrate kinase pfkB family (pfam00294). In the wide gulf between the current trusted (360 bit) and noise (100 bit) cutoffs are a number of sequences, few of which are clustered with predicted ribose transport genes but many of which are currently annotated as if having ribokinase activity. Most likely some have this function and others do not. [Energy metabolism, Sugars]
Pssm-ID: 274000 [Multi-domain] Cd Length: 293 Bit Score: 89.97 E-value: 1.05e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSY-TRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAAR-V 88
Cdd:TIGR02152 1 GSINMDLVLRTDRLPKPGETVHGHSFqIGPGGKGANQAVAAARLGAEVSMIGKVGDDAFGDELLENLKSNGIDTEYVGtV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 PDADTGVCLVLLDPSAERTFITTTGAERAVSIDsfgtssprpgdmvcVTGYSLALPATRDPLLAWLDTLP---------- 158
Cdd:TIGR02152 81 KDTPTGTAFITVDDTGENRIVVVAGANAELTPE--------------DIDAAEALIAESDIVLLQLEIPLetvleaakia 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 159 --AGVGVVLDPGAVFAELDESvrthMIDHTTVWTGNAEESAALGGVG-DMVGSLHACAERLR---PGTVVITRdGPAGCA 232
Cdd:TIGR02152 147 kkHGVKVILNPAPAIKDLDDE----LLSLVDIITPNETEAEILTGIEvTDEEDAEKAAEKLLekgVKNVIITL-GSKGAL 221
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 233 VLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRG 292
Cdd:TIGR02152 222 LVSKDESKLIPAFKVKAVDTTAAGDTFNGAFAVALAEGKSLEDAIRFANAAAAISVTRKG 281
|
|
| PLN02813 |
PLN02813 |
pfkB-type carbohydrate kinase family protein |
11-270 |
1.87e-20 |
|
pfkB-type carbohydrate kinase family protein
Pssm-ID: 215434 [Multi-domain] Cd Length: 426 Bit Score: 90.64 E-value: 1.87e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDV--LVDVPHLPRRG--------------GNVMAT----SYTRHAGGAV-NILVAAARSGGQAVH--------AG 61
Cdd:PLN02813 76 GQAMVDFsgMVDDEFLERLGlekgtrkvinheerGKVLRAldgcSYKASAGGSLsNTLVALARLGSQSAAgpalnvamAG 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 62 AIGTGPNGDLISTTLAEEGVAMSAARVPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGYSL 141
Cdd:PLN02813 156 SVGSDPLGDFYRTKLRRANVHFLSQPVKDGTTGTVIVLTTPDAQRTMLSYQGTSSTVNYDSCLASAISKSRVLVVEGYLW 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 142 ALPATRDPLL-AWLDTLPAGVGVVL---DPGAVFAELDESVRThMIDHTTVWTGNAEESAALGGVGDMVGSLHACAERLR 217
Cdd:PLN02813 236 ELPQTIEAIAqACEEAHRAGALVAVtasDVSCIERHRDDFWDV-MGNYADILFANSDEARALCGLGSEESPESATRYLSH 314
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 2644508497 218 PGTVVITRDGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:PLN02813 315 FCPLVSVTDGARGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYAAGILYGLLRG 367
|
|
| bac_FRK |
cd01167 |
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ... |
11-265 |
3.54e-20 |
|
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.
Pssm-ID: 238572 [Multi-domain] Cd Length: 295 Bit Score: 88.46 E-value: 3.54e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLvdvphlpRRGGNVMATsYTRHAGGAV-NILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSA-ARV 88
Cdd:cd01167 6 GEALIDFI-------PEGSGAPET-FTKAPGGAPaNVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEAGVDTRGiQFD 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 PDADTGVCLVLLDPSAERTFittTGAERAVSIDSFGTSSP----RPGDMVCVTGYSLALPATRDPLLAWLDTL-PAGVGV 163
Cdd:cd01167 78 PAAPTTLAFVTLDADGERSF---EFYRGPAADLLLDTELNpdllSEADILHFGSIALASEPSRSALLELLEAAkKAGVLI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 164 VLDPGA-----VFAELDESVRTHMIDHTTVWTGNAEESAALGGVGDMVGSLHACAErLRPGTVVITRdGPAGCAVLADGS 238
Cdd:cd01167 155 SFDPNLrpplwRDEEEARERIAELLELADIVKLSDEELELLFGEEDPEEIAALLLL-FGLKLVLVTR-GADGALLYTKGG 232
|
250 260
....*....|....*....|....*..
gi 2644508497 239 AREIPGFPQQAVDTNGAGDVHTGAMIA 265
Cdd:cd01167 233 VGEVPGIPVEVVDTTGAGDAFVAGLLA 259
|
|
| ribokinase_group_B |
cd01945 |
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ... |
11-270 |
1.15e-14 |
|
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .
Pssm-ID: 238920 [Multi-domain] Cd Length: 284 Bit Score: 72.71 E-value: 1.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARV- 88
Cdd:cd01945 6 GLAVLDLIYLVASFPGGDGKIVATDYAVIGGGnAANAAVAVARLGGQARLIGVVGDDAIGRLILAELAAEGVDTSFIVVa 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 PDADTGVClVLLDPSAERTFITTTGAERAVSIDSFGTSSPRPGDMVCVTGY--SLALPATRdplLAWLDTLPAGVGVVLD 166
Cdd:cd01945 86 PGARSPIS-SITDITGDRATISITAIDTQAAPDSLPDAILGGADAVLVDGRqpEAALHLAQ---EARARGIPIPLDLDGG 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 167 PGAVFAELdesvrTHMIDHTTVwtgNAEESAALGGVGD-MVGSLHAcaeRLRPGTVVITRdGPAGCAVL-ADGSAREIPG 244
Cdd:cd01945 162 GLRVLEEL-----LPLADHAIC---SENFLRPNTGSADdEALELLA---SLGIPFVAVTL-GEAGCLWLeRDGELFHVPA 229
|
250 260
....*....|....*....|....*.
gi 2644508497 245 FPQQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:cd01945 230 FPVEVVDTTGAGDVFHGAFAHALAEG 255
|
|
| PRK11142 |
PRK11142 |
ribokinase; Provisional |
4-307 |
2.35e-13 |
|
ribokinase; Provisional
Pssm-ID: 236858 [Multi-domain] Cd Length: 306 Bit Score: 69.13 E-value: 2.35e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 4 TPRLIHTGQALVDVLVDVPHLPRRGGNVMATSY-TRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVA 82
Cdd:PRK11142 2 MGKLVVLGSINADHVLNLESFPRPGETLTGRHYqVAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQLAKDGID 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 83 MSAAR-VPDADTGVCLVLLDPSAERTFITTTGAERAVSIDSFGTSSprpgdmvcvtgyslALPATRDPLLAWLDTlP--- 158
Cdd:PRK11142 82 TAPVSvIKGESTGVALIFVNDEGENSIGIHAGANAALTPALVEAHR--------------ELIANADALLMQLET-Plet 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 159 ----------AGVGVVLDPgAVFAEL-DESVRthMIDhttVWTGNAEESAALGG--VGDMVGSLHAcAERLR---PGTVV 222
Cdd:PRK11142 147 vlaaakiakqHGTKVILNP-APARELpDELLA--LVD---IITPNETEAEKLTGirVEDDDDAAKA-AQVLHqkgIETVL 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 223 ITRdGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGP-IAAPNAAE 301
Cdd:PRK11142 220 ITL-GSRGVWLSENGEGQRVPGFRVQAVDTIAAGDTFNGALVTALLEGKPLPEAIRFAHAAAAIAVTRKGAqPSIPWREE 298
|
....*.
gi 2644508497 302 IQRLLN 307
Cdd:PRK11142 299 IDAFLQ 304
|
|
| PLN02341 |
PLN02341 |
pfkB-type carbohydrate kinase family protein |
11-262 |
8.81e-12 |
|
pfkB-type carbohydrate kinase family protein
Pssm-ID: 215195 [Multi-domain] Cd Length: 470 Bit Score: 65.24 E-value: 8.81e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRG--------GNVMATSYTR---HAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEE 79
Cdd:PLN02341 79 GNLCVDIVLPVPELPPPSreerkaymEELAASPPDKkswEAGGNCNFAIAAARLGLRCSTIGHVGDEIYGKFLLDVLAEE 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 80 GVAM---------SAARVPDADTGVCLVLLDPSAERTFIT--TTGAERAVS----IDSFGTSSPRPGDMVCVTGYSLALP 144
Cdd:PLN02341 159 GISVvgliegtdaGDSSSASYETLLCWVLVDPLQRHGFCSraDFGPEPAFSwiskLSAEAKMAIRQSKALFCNGYVFDEL 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 145 ATRDPLLAWLDTLPAGVGVVLDPG----AVFAELDESVRT--HMIDHTTVWTGNAEESAALGGVGDMVgslHACAERLRP 218
Cdd:PLN02341 239 SPSAIASAVDYAIDVGTAVFFDPGprgkSLLVGTPDERRAleHLLRMSDVLLLTSEEAEALTGIRNPI---LAGQELLRP 315
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2644508497 219 GTV---VITRDGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGA 262
Cdd:PLN02341 316 GIRtkwVVVKMGSKGSILVTRSSVSCAPAFKVNVVDTVGCGDSFAAA 362
|
|
| PTZ00292 |
PTZ00292 |
ribokinase; Provisional |
2-303 |
7.51e-11 |
|
ribokinase; Provisional
Pssm-ID: 185541 [Multi-domain] Cd Length: 326 Bit Score: 62.06 E-value: 7.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 2 THTPRLIHTGQALVDVLVDVPHLPRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEG 80
Cdd:PTZ00292 13 EAEPDVVVVGSSNTDLIGYVDRMPQVGETLHGTSFHKGFGGkGANQAVMASKLGAKVAMVGMVGTDGFGSDTIKNFKRNG 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 81 VAMS-AARVPDADTGVCLVLLDP-SAERTFITTTGAERAVSIDSFGTSSP---RPGD-MVCvtgyslalpATRDPLLAWL 154
Cdd:PTZ00292 93 VNTSfVSRTENSSTGLAMIFVDTkTGNNEIVIIPGANNALTPQMVDAQTDniqNICKyLIC---------QNEIPLETTL 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 155 DTL----PAGVGVVLDPGAVFAELDESVRTHMIDHTTVWTGNAEESAALGG--VGDMVGSLHACAERLRPG--TVVITRd 226
Cdd:PTZ00292 164 DALkeakERGCYTVFNPAPAPKLAEVEIIKPFLKYVSLFCVNEVEAALITGmeVTDTESAFKASKELQQLGveNVIITL- 242
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2644508497 227 GPAGCAVLADGSA-REIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGP-IAAPNAAEIQ 303
Cdd:PTZ00292 243 GANGCLIVEKENEpVHVPGKRVKAVDTTGAGDCFVGSMAYFMSRGKDLKESCKRANRIAAISVTRHGTqSSYPHPSELP 321
|
|
| PRK09434 |
PRK09434 |
aminoimidazole riboside kinase; Provisional |
10-271 |
4.26e-10 |
|
aminoimidazole riboside kinase; Provisional
Pssm-ID: 236514 [Multi-domain] Cd Length: 304 Bit Score: 59.56 E-value: 4.26e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 10 TGQALVDVLVDvphlprrGGNvmatSYTRHAGGA-VNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARV 88
Cdd:PRK09434 8 LGDAVVDLIPE-------GEN----RYLKCPGGApANVAVGIARLGGESGFIGRVGDDPFGRFMQQTLQDEGVDTTYLRL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 89 -PDADTGVCLVLLDPSAER--TFITTTGAeravsiDSFGTSS--P--RPGD--MVCvtgySLALPA--TRDPLLAWLDTL 157
Cdd:PRK09434 77 dPAHRTSTVVVDLDDQGERsfTFMVRPSA------DLFLQPQdlPpfRQGEwlHLC----SIALSAepSRSTTFEAMRRI 146
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 158 PAGVGVVL-DPG------AVFAELDESVR--THMIDhttVWTGNAEESAALGGVGDMVGSLHACAERLRPGTVVITRdGP 228
Cdd:PRK09434 147 KAAGGFVSfDPNlredlwQDEAELRECLRqaLALAD---VVKLSEEELCFLSGTSQLEDAIYALADRYPIALLLVTL-GA 222
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 2644508497 229 AGCAVLADGSAREIPGFPQQAVDTNGAGDvhtgAMIAARLAGL 271
Cdd:PRK09434 223 EGVLVHTRGQVQHFPAPSVDPVDTTGAGD----AFVAGLLAGL 261
|
|
| ribokinase_pfkB_like |
cd00287 |
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ... |
131-268 |
5.43e-10 |
|
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).
Pssm-ID: 238177 [Multi-domain] Cd Length: 196 Bit Score: 57.88 E-value: 5.43e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 131 GDMVCVTGYSLALPATRDPLLAwldTLPAGVGVVLDPGAVFAELDESVRTHMIDHTTVWTGNAEESAALGGVGD--MVGS 208
Cdd:cd00287 58 ADAVVISGLSPAPEAVLDALEE---ARRRGVPVVLDPGPRAVRLDGEELEKLLPGVDILTPNEEEAEALTGRRDleVKEA 134
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2644508497 209 LHACAERLRPGT-VVITRDGPAGCAVLADGSAR-EIPGFPQQAVDTNGAGDVHTGAMIAARL 268
Cdd:cd00287 135 AEAAALLLSKGPkVVIVTLGEKGAIVATRGGTEvHVPAFPVKVVDTTGAGDAFLAALAAGLA 196
|
|
| Fructoselysine_kinase_like |
cd01940 |
Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a ... |
41-270 |
6.77e-10 |
|
Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.
Pssm-ID: 238915 [Multi-domain] Cd Length: 264 Bit Score: 58.52 E-value: 6.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 41 GGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARVPDADTGVCLVLLDpSAERTFItttGAERAVSI 120
Cdd:cd01940 23 GNALNVAVYAKRLGHESAYIGAVGNDDAGAHVRSTLKRLGVDISHCRVKEGENAVADVELV-DGDRIFG---LSNKGGVA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 121 DSFgtssPRPGDMVCVTGYSLALPATRDPLLAWLDTLPAGVGvvldPGAVFA------ELDESVRThMIDHTTVWTGNAE 194
Cdd:cd01940 99 REH----PFEADLEYLSQFDLVHTGIYSHEGHLEKALQALVG----AGALISfdfsdrWDDDYLQL-VCPYVDFAFFSAS 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2644508497 195 ESAAlggvgDMVGSLHACAERLRPGTVVITRdGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:cd01940 170 DLSD-----EEVKAKLKEAVSRGAKLVIVTR-GEDGAIAYDGAVFYSVAPRPVEVVDTLGAGDSFIAGFLLSLLAG 239
|
|
| FruK |
COG1105 |
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism]; |
15-307 |
1.01e-07 |
|
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
Pssm-ID: 440722 [Multi-domain] Cd Length: 304 Bit Score: 52.44 E-value: 1.01e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 15 VDVLVDVPHLpRRGGNVMATSYTRHAGG-AVNILVAAARSGGQAVHAGAIGtGPNGDLISTTLAEEGVAMSAARVPDaDT 93
Cdd:COG1105 10 LDRTYEVDEL-EPGEVNRASEVRLDPGGkGINVARVLKALGVDVTALGFLG-GFTGEFIEELLDEEGIPTDFVPIEG-ET 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 94 GVCLVLLDPSAERTF-ITTTG-----AERAVSIDSFGTSSpRPGDMVCVTGySLALPATRDPLLAWLDTL-PAGVGVVLD 166
Cdd:COG1105 87 RINIKIVDPSDGTETeINEPGpeiseEELEALLERLEELL-KEGDWVVLSG-SLPPGVPPDFYAELIRLArARGAKVVLD 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 167 -PGAVFAE-LDESVrtHMIdhttvwTGNAEE-SAALGGVGDMVGSLHACAERLR---PGTVVITRdGPAGcAVLADGS-A 239
Cdd:COG1105 165 tSGEALKAaLEAGP--DLI------KPNLEElEELLGRPLETLEDIIAAARELLergAENVVVSL-GADG-ALLVTEDgV 234
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2644508497 240 REIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPiAAPNAAEIQRLLN 307
Cdd:COG1105 235 YRAKPPKVEVVSTVGAGDSMVAGFLAGLARGLDLEEALRLAVAAGAAAALSPGT-GLPDREDVEELLA 301
|
|
| Guanosine_kinase_like |
cd01947 |
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like ... |
11-294 |
6.73e-05 |
|
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.
Pssm-ID: 238922 [Multi-domain] Cd Length: 265 Bit Score: 43.56 E-value: 6.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 11 GQALVDVLVDVPHLPRRGG-NVMATSYTRHAGGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARvP 89
Cdd:cd01947 6 GHVEWDIFLSLDAPPQPGGiSHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGGDKHTVAW-R 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 90 DADTGVCLVLLDPSAERTFITTTGAERavsiDSFGTSSPRPGDMVCVTGYSlalpatrdPLLAWLDTLPAGVGVVLDPGa 169
Cdd:cd01947 85 DKPTRKTLSFIDPNGERTITVPGERLE----DDLKWPILDEGDGVFITAAA--------VDKEAIRKCRETKLVILQVT- 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 170 vfaeLDESV--RTHMIDHTTVWTGNAEESAALGGVGDMVGSlhacaerlRPGTVVITrDGPAGCAVLADGSAREIPGFPQ 247
Cdd:cd01947 152 ----PRVRVdeLNQALIPLDILIGSRLDPGELVVAEKIAGP--------FPRYLIVT-EGELGAILYPGGRYNHVPAKKA 218
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2644508497 248 QAVDTNGAGDVHTGAMIAARLAGLTWHEAARWGNAAAAIKVTRRGPI 294
Cdd:cd01947 219 KVPDSTGAGDSFAAGFIYGLLKGWSIEEALELGAQCGAICVSHFGPY 265
|
|
| PTZ00247 |
PTZ00247 |
adenosine kinase; Provisional |
1-270 |
7.21e-05 |
|
adenosine kinase; Provisional
Pssm-ID: 240328 [Multi-domain] Cd Length: 345 Bit Score: 43.86 E-value: 7.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 1 MTHTPRLIHTGQALVDVLVDVP--------------------HLPRRGGNVMATSYTRHAGG-AVN-ILVA---AARSGG 55
Cdd:PTZ00247 2 SSAPKKLLGFGNPLLDISAHVSdeflekyglelgsailaeekQLPIFEELESIPNVSYVPGGsALNtARVAqwmLQAPKG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 56 QAVHAGAIGTGPNGDLISTTLAEEGVAMSAARVPDADTGVCLVLLDpSAERTFITTTGAERAVSIDSFGTSSPRPGDMVC 135
Cdd:PTZ00247 82 FVCYVGCVGDDRFAEILKEAAEKDGVEMLFEYTTKAPTGTCAVLVC-GKERSLVANLGAANHLSAEHMQSHAVQEAIKTA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 136 ----VTGYSLalpaTRDPLLAWLDTLPA---GVGVVLDPGAVFAELDESVRTHMI-DHTTVWTGNAEESAALG-GVGDMV 206
Cdd:PTZ00247 161 qlyyLEGFFL----TVSPNNVLQVAKHAresGKLFCLNLSAPFISQFFFERLLQVlPYVDILFGNEEEAKTFAkAMKWDT 236
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2644508497 207 GSLHACAERL---------RPGTVVITRDGPAGCAVLADGSaREIPGFP---QQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:PTZ00247 237 EDLKEIAARIamlpkysgtRPRLVVFTQGPEPTLIATKDGV-TSVPVPPldqEKIVDTNGAGDAFVGGFLAQYANG 311
|
|
| PRK09813 |
PRK09813 |
fructoselysine 6-kinase; Provisional |
41-108 |
1.55e-04 |
|
fructoselysine 6-kinase; Provisional
Pssm-ID: 182090 [Multi-domain] Cd Length: 260 Bit Score: 42.42 E-value: 1.55e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2644508497 41 GGAVNILVAAARSGGQAVHAGAIGTGPNGDLISTTLAEEGVAMSAARVPDADTGVCLVLLDpSAERTF 108
Cdd:PRK09813 24 GNAVNVAVYCTRYGIQPGCITWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELH-DNDRVF 90
|
|
| PLN02323 |
PLN02323 |
probable fructokinase |
226-307 |
1.40e-03 |
|
probable fructokinase
Pssm-ID: 215183 [Multi-domain] Cd Length: 330 Bit Score: 39.99 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 226 DGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAM---IAARLAGLT----WHEAARWGNAAAAIKVTRRGPIAA-P 297
Cdd:PLN02323 237 EGEEGCRYYTKDFKGRVEGFKVKAVDTTGAGDAFVGGLlsqLAKDLSLLEdeerLREALRFANACGAITTTERGAIPAlP 316
|
90
....*....|
gi 2644508497 298 NAAEIQRLLN 307
Cdd:PLN02323 317 TKEAVLKLLK 326
|
|
| RfaE_like |
cd01172 |
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ... |
220-275 |
1.49e-03 |
|
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.
Pssm-ID: 238577 [Multi-domain] Cd Length: 304 Bit Score: 39.47 E-value: 1.49e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2644508497 220 TVVITRdGPAGCAVL-ADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAGLTWHE 275
Cdd:cd01172 221 ALLVTL-GEEGMTLFeRDGEVQHIPALAKEVYDVTGAGDTVIATLALALAAGADLEE 276
|
|
| ribokinase_group_D |
cd01937 |
Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ... |
221-270 |
2.64e-03 |
|
Ribokinase-like subgroup D. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.
Pssm-ID: 238912 [Multi-domain] Cd Length: 254 Bit Score: 38.54 E-value: 2.64e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2644508497 221 VVITRDGPAGCAVLADGSAREIPGFPQQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:cd01937 186 EIIVTDGEEGGYIFDGNGKYTIPASKKDVVDPTGAGDVFLAAFLYSRLSG 235
|
|
| PLN02630 |
PLN02630 |
pfkB-type carbohydrate kinase family protein |
164-272 |
5.31e-03 |
|
pfkB-type carbohydrate kinase family protein
Pssm-ID: 178237 Cd Length: 335 Bit Score: 37.86 E-value: 5.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2644508497 164 VLDP--GAV-FAELDESVRTHMIDHTTVWTGNAEESaalggvgdmvgsLHACAERLRPGTVVITRDGPAGCAVLADGSAR 240
Cdd:PLN02630 157 VFDPvdGTVkLVKLEETGFYDMLPRIGFLKASSEEA------------LFIDVEEVRQKCCVIVTNGKKGCRIYWKDGEM 224
|
90 100 110
....*....|....*....|....*....|..
gi 2644508497 241 EIPGFPQQAVDTNGAGDVHTGAMIAARLAGLT 272
Cdd:PLN02630 225 RVPPFPAIQVDPTGAGDSFLGGFVAGLVQGLA 256
|
|
| PLN02548 |
PLN02548 |
adenosine kinase |
213-270 |
9.61e-03 |
|
adenosine kinase
Pssm-ID: 178163 [Multi-domain] Cd Length: 332 Bit Score: 37.39 E-value: 9.61e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2644508497 213 AERLRPGTVVITRDgpAGCAVLA-DGSAREIPGFP---QQAVDTNGAGDVHTGAMIAARLAG 270
Cdd:PLN02548 241 ASGTHKRTVVITQG--ADPTVVAeDGKVKEFPVIPlpkEKLVDTNGAGDAFVGGFLSQLVQG 300
|
|
| |
