NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2652589331|ref|WP_326635251|]
View 

MULTISPECIES: acetate--CoA ligase family protein [unclassified Streptosporangium]

Protein Classification

acetate--CoA ligase family protein( domain architecture ID 11437147)

acetate--CoA ligase family protein similar to ADP-forming acetate--CoA ligase that catalyzes the formation of acetate and ATP from acetyl-CoA by using ADP and phosphate

CATH:  3.30.1490.20
EC:  6.2.1.-
Gene Ontology:  GO:0043758|GO:0005524|GO:0046872
PubMed:  15491124|15316652
SCOP:  3000003

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PatZN COG1042
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
9-687 1.60e-177

Acyl-CoA synthetase (NDP forming) [Energy production and conversion];


:

Pssm-ID: 440664 [Multi-domain]  Cd Length: 708  Bit Score: 523.15  E-value: 1.60e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331   9 IERFYRPRSIAVVGAHDTRAGLAGLTEKAITHAKAVGAaFHPVNPKRESVFGIPCVASLTDLQGPI--DVVVVQVGDPVG 86
Cdd:COG1042     6 LDALFRPRSVAVIGASDRPGKVGGRVLRNLLEGGFKGK-IYPVNPKYDEVLGLPCYPSVADLPEPPdlAVIAVPAETVPD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331  87 VIDAAADAGlkVGFYLVFSNGFSELGtPEGVARERSLLEAVRRAGARLVGPNTN--VNAWDPL------ADLPGRRLAVV 158
Cdd:COG1042    85 VVEECGEKG--VKAAVVISAGFAETG-EEGAALEQELLEIARRYGMRLLGPNCLglINPATGLnatfapVPPLPGNIALV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 159 SQSG-VQGRPLTQAQELGVALSYWAPTGNEADLEAADFAEFFVRDPETAAVCGYIEGFNSGEKLRSAAIAAIENdTPIVL 237
Cdd:COG1042   162 SQSGaLGTAILDWAAARGIGFSHFVSLGNEADVDFADLLDYLADDPDTRVILLYLEGIRDGRRFLSAARAAARG-KPVVV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 238 VKVGRSSLGSSMAQSHTGHLAGADEVYDAFFEQFGMVRVPDVDQLVEVGVALARCPIPTAEGVVICSASGGTAAHVADLA 317
Cdd:COG1042   241 LKSGRSEAGARAAASHTGALAGSDAVYDAAFRRAGVIRVDDLEELFDAAEALARQPPPRGRRLAIVTNSGGPGVLAADAL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 318 TLGGLSMPSLSARTQADLAEVIPAGFRLDNPVDnggavVIGDREAGR--RIWELCLRDEHIGVMLCPIPASAPQLTDAMI 395
Cdd:COG1042   321 EDLGLELAELSEETQAALRAVLPPFASVGNPVD-----ITGDADPERyaAALEALLADPNVDAVLVILTPTAMTDPEEVA 395

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 396 EIVLQVAATATKPILPIWSGPSVRHPGYQALWDAGLPVFRNVSNAVAAARALIGH------PARTPRLKEI---ARLARE 466
Cdd:COG1042   396 EALIEAAKGSGKPVLASWMGGDSVAEARRLLREAGIPTFRTPERAVRALAALVRYrrnqerLMETPASEDFdpdRERARA 475

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 467 HPSPAVPSGEGWvLEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGRGA--AHKSERGFVVTGLADAAA 544
Cdd:COG1042   476 IIEAALAEGRGV-LTEAEAKALLAAYGIPVVPTRLARSAEEAVAAAEEIGYPVVLKIVSPdiLHKSDVGGVRLNLRDAEA 554

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 545 VRAAAELLRDRGAA--------GFLVAEQVSGGIELLVGITADPVLGPVVLVGAGGVTAEAQRDVARSVLPLTRERAMEM 616
Cdd:COG1042   555 VRAAFEEILARVRAarpdaridGVLVQPMVPGGVELIVGVKRDPVFGPVIMFGLGGIFVEVLKDVALRLPPLNEALAREM 634

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2652589331 617 LAGLRISPLLDGWRGAPAADRDAVVDLLLKLASIA-ETGQVVELDVNPILARPGGVLGLDALVRLAPGVTGP 687
Cdd:COG1042   635 IRELRAAKLLRGYRGRPPADLDALADVLVRLSQLAaDLPEILELDINPLLVVPEGVVAVDARIRLAPPAPPA 706
 
Name Accession Description Interval E-value
PatZN COG1042
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
9-687 1.60e-177

Acyl-CoA synthetase (NDP forming) [Energy production and conversion];


Pssm-ID: 440664 [Multi-domain]  Cd Length: 708  Bit Score: 523.15  E-value: 1.60e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331   9 IERFYRPRSIAVVGAHDTRAGLAGLTEKAITHAKAVGAaFHPVNPKRESVFGIPCVASLTDLQGPI--DVVVVQVGDPVG 86
Cdd:COG1042     6 LDALFRPRSVAVIGASDRPGKVGGRVLRNLLEGGFKGK-IYPVNPKYDEVLGLPCYPSVADLPEPPdlAVIAVPAETVPD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331  87 VIDAAADAGlkVGFYLVFSNGFSELGtPEGVARERSLLEAVRRAGARLVGPNTN--VNAWDPL------ADLPGRRLAVV 158
Cdd:COG1042    85 VVEECGEKG--VKAAVVISAGFAETG-EEGAALEQELLEIARRYGMRLLGPNCLglINPATGLnatfapVPPLPGNIALV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 159 SQSG-VQGRPLTQAQELGVALSYWAPTGNEADLEAADFAEFFVRDPETAAVCGYIEGFNSGEKLRSAAIAAIENdTPIVL 237
Cdd:COG1042   162 SQSGaLGTAILDWAAARGIGFSHFVSLGNEADVDFADLLDYLADDPDTRVILLYLEGIRDGRRFLSAARAAARG-KPVVV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 238 VKVGRSSLGSSMAQSHTGHLAGADEVYDAFFEQFGMVRVPDVDQLVEVGVALARCPIPTAEGVVICSASGGTAAHVADLA 317
Cdd:COG1042   241 LKSGRSEAGARAAASHTGALAGSDAVYDAAFRRAGVIRVDDLEELFDAAEALARQPPPRGRRLAIVTNSGGPGVLAADAL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 318 TLGGLSMPSLSARTQADLAEVIPAGFRLDNPVDnggavVIGDREAGR--RIWELCLRDEHIGVMLCPIPASAPQLTDAMI 395
Cdd:COG1042   321 EDLGLELAELSEETQAALRAVLPPFASVGNPVD-----ITGDADPERyaAALEALLADPNVDAVLVILTPTAMTDPEEVA 395

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 396 EIVLQVAATATKPILPIWSGPSVRHPGYQALWDAGLPVFRNVSNAVAAARALIGH------PARTPRLKEI---ARLARE 466
Cdd:COG1042   396 EALIEAAKGSGKPVLASWMGGDSVAEARRLLREAGIPTFRTPERAVRALAALVRYrrnqerLMETPASEDFdpdRERARA 475

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 467 HPSPAVPSGEGWvLEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGRGA--AHKSERGFVVTGLADAAA 544
Cdd:COG1042   476 IIEAALAEGRGV-LTEAEAKALLAAYGIPVVPTRLARSAEEAVAAAEEIGYPVVLKIVSPdiLHKSDVGGVRLNLRDAEA 554

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 545 VRAAAELLRDRGAA--------GFLVAEQVSGGIELLVGITADPVLGPVVLVGAGGVTAEAQRDVARSVLPLTRERAMEM 616
Cdd:COG1042   555 VRAAFEEILARVRAarpdaridGVLVQPMVPGGVELIVGVKRDPVFGPVIMFGLGGIFVEVLKDVALRLPPLNEALAREM 634

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2652589331 617 LAGLRISPLLDGWRGAPAADRDAVVDLLLKLASIA-ETGQVVELDVNPILARPGGVLGLDALVRLAPGVTGP 687
Cdd:COG1042   635 IRELRAAKLLRGYRGRPPADLDALADVLVRLSQLAaDLPEILELDINPLLVVPEGVVAVDARIRLAPPAPPA 706
ATP-grasp_5 pfam13549
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent ...
 479-680 2.19e-54

ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.


Pssm-ID: 463918 [Multi-domain]  Cd Length: 221  Bit Score: 185.76  E-value: 2.19e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 479 VLEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGRGA--AHKSERGFVVTGLADAAAVRAAAELLRDR- 555
Cdd:pfam13549   9 VLTEPEAKALLAAYGIPVVPTRLARSPEEAVAAAEEIGYPVVLKIVSPdiLHKSDVGGVRLNLRSAEAVRAAYEEILERv 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 556 -------GAAGFLVAEQVSGGIELLVGITADPVLGPVVLVGAGGVTAEAQRDVARSVLPLTRERAMEMLAGLRISPLLDG 628
Cdd:pfam13549  89 rryrpdaRIEGVLVQPMAPGGRELIVGVTRDPQFGPVIMFGLGGIAVEVLKDVAFRLPPLNMTLAREMIRRTRAYKLLKG 168

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2652589331 629 WRGAPAADRDAVVDLLLKLAS-IAETGQVVELDVNPILARPGGVLGLDALVRL 680
Cdd:pfam13549 169 YRGEPPADLDALEDVLVRVSQlVIDFPEIRELDINPLLADEDGVVALDARIRL 221
PRK14016 PRK14016
cyanophycin synthetase; Provisional
 489-525 8.87e-04

cyanophycin synthetase; Provisional


Pssm-ID: 237586 [Multi-domain]  Cd Length: 727  Bit Score: 42.45  E-value: 8.87e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2652589331 489 LESHGIPFARHALAGTVEEAVEAAETIGCPVVLK------GRG 525
Cdd:PRK14016  222 LAAAGVPVPEGRVVTSAEDAWEAAEEIGYPVVVKpldgnhGRG 264
 
Name Accession Description Interval E-value
PatZN COG1042
Acyl-CoA synthetase (NDP forming) [Energy production and conversion];
9-687 1.60e-177

Acyl-CoA synthetase (NDP forming) [Energy production and conversion];


Pssm-ID: 440664 [Multi-domain]  Cd Length: 708  Bit Score: 523.15  E-value: 1.60e-177
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331   9 IERFYRPRSIAVVGAHDTRAGLAGLTEKAITHAKAVGAaFHPVNPKRESVFGIPCVASLTDLQGPI--DVVVVQVGDPVG 86
Cdd:COG1042     6 LDALFRPRSVAVIGASDRPGKVGGRVLRNLLEGGFKGK-IYPVNPKYDEVLGLPCYPSVADLPEPPdlAVIAVPAETVPD 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331  87 VIDAAADAGlkVGFYLVFSNGFSELGtPEGVARERSLLEAVRRAGARLVGPNTN--VNAWDPL------ADLPGRRLAVV 158
Cdd:COG1042    85 VVEECGEKG--VKAAVVISAGFAETG-EEGAALEQELLEIARRYGMRLLGPNCLglINPATGLnatfapVPPLPGNIALV 161

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 159 SQSG-VQGRPLTQAQELGVALSYWAPTGNEADLEAADFAEFFVRDPETAAVCGYIEGFNSGEKLRSAAIAAIENdTPIVL 237
Cdd:COG1042   162 SQSGaLGTAILDWAAARGIGFSHFVSLGNEADVDFADLLDYLADDPDTRVILLYLEGIRDGRRFLSAARAAARG-KPVVV 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 238 VKVGRSSLGSSMAQSHTGHLAGADEVYDAFFEQFGMVRVPDVDQLVEVGVALARCPIPTAEGVVICSASGGTAAHVADLA 317
Cdd:COG1042   241 LKSGRSEAGARAAASHTGALAGSDAVYDAAFRRAGVIRVDDLEELFDAAEALARQPPPRGRRLAIVTNSGGPGVLAADAL 320

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 318 TLGGLSMPSLSARTQADLAEVIPAGFRLDNPVDnggavVIGDREAGR--RIWELCLRDEHIGVMLCPIPASAPQLTDAMI 395
Cdd:COG1042   321 EDLGLELAELSEETQAALRAVLPPFASVGNPVD-----ITGDADPERyaAALEALLADPNVDAVLVILTPTAMTDPEEVA 395

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 396 EIVLQVAATATKPILPIWSGPSVRHPGYQALWDAGLPVFRNVSNAVAAARALIGH------PARTPRLKEI---ARLARE 466
Cdd:COG1042   396 EALIEAAKGSGKPVLASWMGGDSVAEARRLLREAGIPTFRTPERAVRALAALVRYrrnqerLMETPASEDFdpdRERARA 475

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 467 HPSPAVPSGEGWvLEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGRGA--AHKSERGFVVTGLADAAA 544
Cdd:COG1042   476 IIEAALAEGRGV-LTEAEAKALLAAYGIPVVPTRLARSAEEAVAAAEEIGYPVVLKIVSPdiLHKSDVGGVRLNLRDAEA 554

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 545 VRAAAELLRDRGAA--------GFLVAEQVSGGIELLVGITADPVLGPVVLVGAGGVTAEAQRDVARSVLPLTRERAMEM 616
Cdd:COG1042   555 VRAAFEEILARVRAarpdaridGVLVQPMVPGGVELIVGVKRDPVFGPVIMFGLGGIFVEVLKDVALRLPPLNEALAREM 634

                         650       660       670       680       690       700       710
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2652589331 617 LAGLRISPLLDGWRGAPAADRDAVVDLLLKLASIA-ETGQVVELDVNPILARPGGVLGLDALVRLAPGVTGP 687
Cdd:COG1042   635 IRELRAAKLLRGYRGRPPADLDALADVLVRLSQLAaDLPEILELDINPLLVVPEGVVAVDARIRLAPPAPPA 706
ATP-grasp_5 pfam13549
ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent ...
 479-680 2.19e-54

ATP-grasp domain; This family includes a diverse set of enzymes that possess ATP-dependent carboxylate-amine ligase activity.


Pssm-ID: 463918 [Multi-domain]  Cd Length: 221  Bit Score: 185.76  E-value: 2.19e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 479 VLEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGRGA--AHKSERGFVVTGLADAAAVRAAAELLRDR- 555
Cdd:pfam13549   9 VLTEPEAKALLAAYGIPVVPTRLARSPEEAVAAAEEIGYPVVLKIVSPdiLHKSDVGGVRLNLRSAEAVRAAYEEILERv 88

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 556 -------GAAGFLVAEQVSGGIELLVGITADPVLGPVVLVGAGGVTAEAQRDVARSVLPLTRERAMEMLAGLRISPLLDG 628
Cdd:pfam13549  89 rryrpdaRIEGVLVQPMAPGGRELIVGVTRDPQFGPVIMFGLGGIAVEVLKDVAFRLPPLNMTLAREMIRRTRAYKLLKG 168

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 2652589331 629 WRGAPAADRDAVVDLLLKLAS-IAETGQVVELDVNPILARPGGVLGLDALVRL 680
Cdd:pfam13549 169 YRGEPPADLDALEDVLVRVSQlVIDFPEIRELDINPLLADEDGVVALDARIRL 221
Succ_CoA_lig pfam13607
Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from ...
 154-289 3.97e-37

Succinyl-CoA ligase like flavodoxin domain; This domain contains the catalytic domain from Succinyl-CoA ligase alpha subunit and other related enzymes. A conserved histidine is involved in phosphoryl transfer.


Pssm-ID: 433345 [Multi-domain]  Cd Length: 138  Bit Score: 135.29  E-value: 3.97e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 154 RLAVVSQSG-VQGRPLTQAQELGVALSYWAPTGNEADLEAADFAEFFVRDPETAAVCGYIEGFNSGEKLRSAAIAAIENd 232
Cdd:pfam13607   3 NIALVSQSGaLGAALLDWARSRGIGFSKFVSLGNEADVDFADLLEYLADDPETRVILLYLEGIRDGRRFLRAARRAARR- 81

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2652589331 233 TPIVLVKVGRSSLGSSMAQSHTGHLAGADEVYDAFFEQFGMVRVPDVDQLVEVGVAL 289
Cdd:pfam13607  82 KPVVVLKAGRSEAGARAAASHTGALAGSDAVYDAAFRQAGVIRVDDLEELFDAAEAL 138
CoA_binding_2 pfam13380
CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins ...
 16-74 3.54e-06

CoA binding domain; This domain has a Rossmann fold and is found in a number of proteins including succinyl CoA synthetases, malate and ATP-citrate ligases.


Pssm-ID: 433162 [Multi-domain]  Cd Length: 116  Bit Score: 46.38  E-value: 3.54e-06
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2652589331  16 RSIAVVGAHD--TRAGlagltEKAITHAKAVGAAFHPVNPKRESVFGIPCVASLTDLQGPI 74
Cdd:pfam13380   1 KTIAVVGASPnpGRPG-----YKVARYLLEHGYPVIPVNPKAKEILGEPVYPSLADPPEPV 56
YccU COG1832
Predicted CoA-binding protein [General function prediction only];
1-74 3.32e-05

Predicted CoA-binding protein [General function prediction only];


Pssm-ID: 441437 [Multi-domain]  Cd Length: 138  Bit Score: 43.96  E-value: 3.32e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2652589331   1 MTEVQPVEIERFYR-PRSIAVVGAHDTraglaglTEKA---ITHA-KAVGAAFHPVNPKRESVFGIPCVASLTDLQGPI 74
Cdd:COG1832     1 MDNPDDEEIREILKsAKTIAVVGLSPN-------PERPsyyVAKYlQRHGYRVIPVNPGAKEILGEKVYASLADIPEPV 72
SucC COG0045
Succinyl-CoA synthetase, beta subunit [Energy production and conversion]; Succinyl-CoA ...
 489-676 4.84e-05

Succinyl-CoA synthetase, beta subunit [Energy production and conversion]; Succinyl-CoA synthetase, beta subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 439815 [Multi-domain]  Cd Length: 388  Bit Score: 46.20  E-value: 4.84e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 489 LESHGIPFARHALAGTVEEAVEAAETIGC-PVVLK------GRGAAhkserGFVVTGLADAAAVRAAAELLRDR------ 555
Cdd:COG0045    12 LAKYGVPVPRGIVATTPEEAVAAAEELGGpPVVVKaqvhagGRGKA-----GGVKLAKSPEEAREAAEEILGMTlvthqt 86

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2652589331 556 GAAGF-----LVAEQVSGGIELLVGITADPVLGPVVLVG--AGGVTAEaqrDVARS------------VLPLTRERAMEM 616
Cdd:COG0045    87 GPKGKpvnkvLVEEGVDIAKELYLSILLDRATRRPVIMAstEGGMDIE---EVAEEtpekiikvpidpLVGLQPYQAREL 163

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2652589331 617 LAGLrisplldgwrGAPAADRDAVVDLLLKLASIAetgqvVELD-----VNP-ILARPGGVLGLDA 676
Cdd:COG0045   164 AFAL----------GLPGKQVKQFAKILKKLYRAF-----VEKDaslveINPlVVTKDGRLVALDA 214
PRK14016 PRK14016
cyanophycin synthetase; Provisional
 489-525 8.87e-04

cyanophycin synthetase; Provisional


Pssm-ID: 237586 [Multi-domain]  Cd Length: 727  Bit Score: 42.45  E-value: 8.87e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2652589331 489 LESHGIPFARHALAGTVEEAVEAAETIGCPVVLK------GRG 525
Cdd:PRK14016  222 LAAAGVPVPEGRVVTSAEDAWEAAEEIGYPVVVKpldgnhGRG 264
PurK COG0026
Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and ...
 487-522 8.88e-04

Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) is part of the Pathway/BioSystem: Purine biosynthesis


Pssm-ID: 439797 [Multi-domain]  Cd Length: 353  Bit Score: 41.98  E-value: 8.88e-04
                          10        20        30
                  ....*....|....*....|....*....|....*.
gi 2652589331 487 RWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLK 522
Cdd:COG0026    95 AFLAELGIPVAPFAAVDSLEDLEAAIAELGLPAVLK 130
CarB COG0458
Carbamoylphosphate synthase large subunit [Amino acid transport and metabolism, Nucleotide ...
 489-525 2.25e-03

Carbamoylphosphate synthase large subunit [Amino acid transport and metabolism, Nucleotide transport and metabolism]; Carbamoylphosphate synthase large subunit is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 440226 [Multi-domain]  Cd Length: 536  Bit Score: 41.02  E-value: 2.25e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 2652589331 489 LESHGIPFARHALAGTVEEAVEAAETIGCPV------VLKGRG 525
Cdd:COG0458   122 LDKLGIPQPKSGTATSVEEALAIAEEIGYPVivrpsyVLGGRG 164
ATP-grasp_2 pfam08442
ATP-grasp domain;
480-527 2.88e-03

ATP-grasp domain;


Pssm-ID: 400651 [Multi-domain]  Cd Length: 202  Bit Score: 39.55  E-value: 2.88e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2652589331 480 LEESESTRWLESHGIPFARHALAGTVEEAVEAAETIGCPV-VLK------GRGAA 527
Cdd:pfam08442   2 LHEYQAKEIFAKYGIPVPRGEVATSPEEAEEIAKKLGGKVyVVKaqvlagGRGKA 56
sucC PRK00696
ADP-forming succinate--CoA ligase subunit beta;
489-527 5.75e-03

ADP-forming succinate--CoA ligase subunit beta;


Pssm-ID: 234813 [Multi-domain]  Cd Length: 388  Bit Score: 39.69  E-value: 5.75e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2652589331 489 LESHGIPFARHALAGTVEEAVEAAETIGCP-VVLK------GRGAA 527
Cdd:PRK00696   12 FAKYGVPVPRGIVATTPEEAVEAAEELGGGvWVVKaqvhagGRGKA 57
carB PRK05294
carbamoyl-phosphate synthase large subunit;
489-525 7.08e-03

carbamoyl-phosphate synthase large subunit;


Pssm-ID: 235393 [Multi-domain]  Cd Length: 1066  Bit Score: 39.70  E-value: 7.08e-03
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|...
gi 2652589331  489 LESHGIPFARHALAGTVEEAVEAAETIGCPV------VLKGRG 525
Cdd:PRK05294   677 LEKLGIPQPPNGTATSVEEALEVAEEIGYPVlvrpsyVLGGRA 719
PRK06019 PRK06019
phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
 487-524 7.14e-03

phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed


Pssm-ID: 235674 [Multi-domain]  Cd Length: 372  Bit Score: 39.37  E-value: 7.14e-03
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2652589331 487 RWLESHGIPFARHALAGTVEEAVEAAETIGCPVVLKGR 524
Cdd:PRK06019  106 QFLDKLGIPVAPFAVVDSAEDLEAALADLGLPAVLKTR 143
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH