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Conserved domains on  [gi|2697035154|ref|WP_336313758|]
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MULTISPECIES: ORF6N domain-containing protein [unclassified Providencia]

Protein Classification

ORF6N domain-containing protein( domain architecture ID 10565586)

ORF6N domain-containing protein may be a DNA-binding protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ORF6N pfam10543
ORF6N domain; This domain was identified by Iyer and colleagues.
 14-107 5.46e-17

ORF6N domain; This domain was identified by Iyer and colleagues.


:

Pssm-ID: 431348  Cd Length: 84  Bit Score: 73.35  E-value: 5.46e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697035154  14 IIHNNMPVITTDLLADVYETEIQNIKTNHSRNRDRFIEGkHFFKLTGsilKDFKNQVTQsNLVKNNrvsqsysvNKRVSH 93
Cdd:pfam10543   4 YEIRGQRVMLDSDLAELYGVETKRLNQAVKRNIERFPED-FMFQLTK---EELRNLRSQ-FVTSSG--------GGRRYL 70

                          90
                  ....*....|....
gi 2697035154  94 LILWTERGAARHAK 107
Cdd:pfam10543  71 PYAFTEQGVAMLAK 84
 
Name Accession Description Interval E-value
ORF6N pfam10543
ORF6N domain; This domain was identified by Iyer and colleagues.
 14-107 5.46e-17

ORF6N domain; This domain was identified by Iyer and colleagues.


Pssm-ID: 431348  Cd Length: 84  Bit Score: 73.35  E-value: 5.46e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697035154  14 IIHNNMPVITTDLLADVYETEIQNIKTNHSRNRDRFIEGkHFFKLTGsilKDFKNQVTQsNLVKNNrvsqsysvNKRVSH 93
Cdd:pfam10543   4 YEIRGQRVMLDSDLAELYGVETKRLNQAVKRNIERFPED-FMFQLTK---EELRNLRSQ-FVTSSG--------GGRRYL 70

                          90
                  ....*....|....
gi 2697035154  94 LILWTERGAARHAK 107
Cdd:pfam10543  71 PYAFTEQGVAMLAK 84
 
Name Accession Description Interval E-value
ORF6N pfam10543
ORF6N domain; This domain was identified by Iyer and colleagues.
 14-107 5.46e-17

ORF6N domain; This domain was identified by Iyer and colleagues.


Pssm-ID: 431348  Cd Length: 84  Bit Score: 73.35  E-value: 5.46e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697035154  14 IIHNNMPVITTDLLADVYETEIQNIKTNHSRNRDRFIEGkHFFKLTGsilKDFKNQVTQsNLVKNNrvsqsysvNKRVSH 93
Cdd:pfam10543   4 YEIRGQRVMLDSDLAELYGVETKRLNQAVKRNIERFPED-FMFQLTK---EELRNLRSQ-FVTSSG--------GGRRYL 70

                          90
                  ....*....|....
gi 2697035154  94 LILWTERGAARHAK 107
Cdd:pfam10543  71 PYAFTEQGVAMLAK 84
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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