NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2697442656|ref|WP_336493934|]
View 

amino acid permease [Streptococcus pasteurianus]

Protein Classification

APC family permease( domain architecture ID 11425014)

APC (amino acid/polyamine/organocation) family permease is involved in the uptake of a specific amino acid and/or polyamine substrate with the concomitant import of a proton

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
16-467 3.80e-83

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


:

Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 262.91  E-value: 3.80e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGmGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:COG0531     9 LKRKLGLFDLVALGVGAIIGAGIFVLPG-LAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLktfgislptvlsgpfnpkNGTYIDIVPVLLLFFVTAFVLLGVQTVLR 175
Cdd:COG0531    88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLF------------------PAGGSVLIALVLILLLTLLNLRGVKESAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 176 FNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGfgqiyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQ 255
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAG-----GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPR 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 256 GIFISIGLVTLLYVAVTLILTGTVHYSKL-NITDVVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISC 334
Cdd:COG0531   225 AIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 335 DGLLPEQFQELTPKSKVPKKATIFVGLVTMFF--SGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEpKEEEFRTP 412
Cdd:COG0531   305 DGLLPKVFAKVHPRFGTPVNAILLTGVIALLLllLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPD-LPRPFRVP 383
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2697442656 413 WvPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHSKLREDSKK 467
Cdd:COG0531   384 L-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEE 437
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
16-467 3.80e-83

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 262.91  E-value: 3.80e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGmGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:COG0531     9 LKRKLGLFDLVALGVGAIIGAGIFVLPG-LAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLktfgislptvlsgpfnpkNGTYIDIVPVLLLFFVTAFVLLGVQTVLR 175
Cdd:COG0531    88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLF------------------PAGGSVLIALVLILLLTLLNLRGVKESAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 176 FNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGfgqiyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQ 255
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAG-----GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPR 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 256 GIFISIGLVTLLYVAVTLILTGTVHYSKL-NITDVVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISC 334
Cdd:COG0531   225 AIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 335 DGLLPEQFQELTPKSKVPKKATIFVGLVTMFF--SGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEpKEEEFRTP 412
Cdd:COG0531   305 DGLLPKVFAKVHPRFGTPVNAILLTGVIALLLllLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPD-LPRPFRVP 383
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2697442656 413 WvPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHSKLREDSKK 467
Cdd:COG0531   384 L-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEE 437
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
16-454 2.06e-81

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 258.53  E-value: 2.06e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQyAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGK-AGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKTFGISLPTVLSGPfnPKNGTYIDIVPVLLLFFVTAFVLLGVQTVLR 175
Cdd:TIGR00909  80 LTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGLDLPAVLTAK--PGNGGVFNLPALLIVLFLTYILYLGAKESGK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 176 FNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGqiyggkvGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQ 255
Cdd:TIGR00909 158 VNDILVVLKVAALLLFAALGAIHFASNNYTPFMPMGFG-------GVGAATALVFFAFIGFEAISTAAEEVKNPERDIPK 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 256 GIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVLR-SIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISC 334
Cdd:TIGR00909 231 AIILSLIVVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGyDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 335 DGLLPEQFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEPKeEEFRTPWV 414
Cdd:TIGR00909 311 DGLLPGSLSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQ-RAFRCPLV 389
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 2697442656 415 PFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGY 454
Cdd:TIGR00909 390 PVLPVLVVSYCIYLLLNLGPGTTVWFLVWMLLGSVFYFIY 429
AA_permease_2 pfam13520
Amino acid permease;
20-450 4.43e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 109.71  E-value: 4.43e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  20 LGLAELIFLGVGSIVGTGIFTITGMGAAqyaGPAITVSILIAAFCVTISALF-FAEFSSRLPHSGGVYRYLYTVFGEYPA 98
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASG---GPALIVWGWIAAIIFSLAVGLvYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  99 WIAGWFMIIEFAGAISTAASGWGEYLKAFLktfgislptvlsGPFNPKNGTYIDIVPVLLLFFVTAFVLLGVQTVLRFNS 178
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSAL------------GPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQN 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 179 ILVIFKLAVLLIF-IALGLTAINVDNWSNFAPYGFGQIYGGKVGIMAGASLMFFAFLGFESISMAADETKepQKKIPQGI 257
Cdd:pfam13520 146 ILGILKLLLPLILiIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK--KRNVPKAI 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 258 FISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYV----LRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNIS 333
Cdd:pfam13520 224 FIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVaallFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALA 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 334 CDGLLPE-QFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILAL--LVNIVTLAYLI---LLALGVIKLRKDFGEPKEE 407
Cdd:pfam13520 304 RDGVLPFsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYnaLLSLSAYGYLLsylLPIIGLLILRKKRPDLGRI 383
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 2697442656 408 EFRTPWVPFLPLLSI-VIYLSLMTQCKAITWYGFIASFILGSLI 450
Cdd:pfam13520 384 PGRWPVAIFGILFSLfLIVALFFPPVGPATGSSLNYAIILIVAF 427
frlA PRK11357
amino acid permease;
16-429 4.78e-25

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 107.25  E-value: 4.78e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQYAGPAITV-SILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFG 94
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVlAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  95 EYPAWIAGWFMI-IEFAGAISTAASGWGEYLkaflktfgislptvlsGPFNPKNGTYIDIVPVLLLFFVTAFVLLGVQTV 173
Cdd:PRK11357   86 RPLAFLSGWASFwANDAPSLSIMALAIVSNL----------------GFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGG 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 174 LRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGQIyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKI 253
Cdd:PRK11357  150 AAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGAT-GSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTM 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 254 PQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDvVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALT----RMI 329
Cdd:PRK11357  229 PRALIGSCLLVLVLYTLLALVISGLMPFDKLANSE-TPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVmyqpRLE 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 330 YNISCDGLLPEQFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKDfgEPKEEEF 409
Cdd:PRK11357  308 YAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKR--DDYKPLW 385
                         410       420
                  ....*....|....*....|
gi 2697442656 410 RTPWVPFLPLLSIVIYLSLM 429
Cdd:PRK11357  386 RTPAFGLMTTLAIASSLILV 405
 
Name Accession Description Interval E-value
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
16-467 3.80e-83

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 262.91  E-value: 3.80e-83
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGmGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:COG0531     9 LKRKLGLFDLVALGVGAIIGAGIFVLPG-LAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARRALGP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLktfgislptvlsgpfnpkNGTYIDIVPVLLLFFVTAFVLLGVQTVLR 175
Cdd:COG0531    88 LLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLF------------------PAGGSVLIALVLILLLTLLNLRGVKESAK 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 176 FNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGfgqiyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQ 255
Cdd:COG0531   150 VNNILTVLKLLVLLLFIVVGLFAFDPANFTPFLPAG-----GGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPR 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 256 GIFISIGLVTLLYVAVTLILTGTVHYSKL-NITDVVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISC 334
Cdd:COG0531   225 AIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMAR 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 335 DGLLPEQFQELTPKSKVPKKATIFVGLVTMFF--SGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEpKEEEFRTP 412
Cdd:COG0531   305 DGLLPKVFAKVHPRFGTPVNAILLTGVIALLLllLGAASFTALASLASVGVLLAYLLVALAVIVLRRRRPD-LPRPFRVP 383
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2697442656 413 WvPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHSKLREDSKK 467
Cdd:COG0531   384 L-PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLLYRRRHPKLLKEAEE 437
2A0306 TIGR00909
amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]
16-454 2.06e-81

amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 129987 [Multi-domain]  Cd Length: 429  Bit Score: 258.53  E-value: 2.06e-81
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQyAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:TIGR00909   1 LSRELGLFDLTMLGIGAMIGTGIFVVTGIAAGK-AGPAVILSFVLAGLTALFIALVYAELAAMLPVAGSPYTYAYEAMGE 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKTFGISLPTVLSGPfnPKNGTYIDIVPVLLLFFVTAFVLLGVQTVLR 175
Cdd:TIGR00909  80 LTAFIIGWSLWLEYGVAVAAVAVGWGGYLQEFLPGVGLDLPAVLTAK--PGNGGVFNLPALLIVLFLTYILYLGAKESGK 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 176 FNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGqiyggkvGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQ 255
Cdd:TIGR00909 158 VNDILVVLKVAALLLFAALGAIHFASNNYTPFMPMGFG-------GVGAATALVFFAFIGFEAISTAAEEVKNPERDIPK 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 256 GIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVLR-SIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISC 334
Cdd:TIGR00909 231 AIILSLIVVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGyDLGQGIGGLILTAGAVFSIASVMLAGIYGTSRVLFAMSR 310
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 335 DGLLPEQFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKDFGEPKeEEFRTPWV 414
Cdd:TIGR00909 311 DGLLPGSLSKVHPKTGTPHMSIIIFSLTAALLASLVPLEGLAELTSIGTLIAFAAVNVAVIILRRRRPDIQ-RAFRCPLV 389
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|
gi 2697442656 415 PFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGY 454
Cdd:TIGR00909 390 PVLPVLVVSYCIYLLLNLGPGTTVWFLVWMLLGSVFYFIY 429
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
14-460 1.34e-61

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 210.06  E-value: 1.34e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  14 SYLQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVF 93
Cdd:TIGR00906  24 SKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTV 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  94 GEYPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKTFGISLPTVLSGPFNPKNGTYIDIVPVLLLFFVTAFVLLGVQTV 173
Cdd:TIGR00906 104 GELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFKLNYDGLAEYPDFFAVCLILLLAVLLSFGVKES 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 174 LRFNSILVIFKLAVLLIFIALGLTAINVDNWS--------NFAPYGFgqiyggkVGIMAGASLMFFAFLGFESISMAADE 245
Cdd:TIGR00906 184 AWVNKIFTAINILVLLFVIIAGFTKADVANWSiteekgagGFMPYGF-------TGVLSGAATCFFAFIGFDAIATTGEE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 246 TKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYAL 325
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFPL 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 326 TRMIYNISCDGLLPEQFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKD----- 400
Cdd:TIGR00906 337 PRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLKALVDLLSIGTLLAYSLVAACVLILRYQpglvy 416
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 401 -----------------------------------------------------------------------------FGE 403
Cdd:TIGR00906 417 dqakdtdekdtldswvpftsksesqsegfslrtlfsglilglsilttygraaiaeeawsialltlflvlfllvvltiWRQ 496
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 404 PKEEE---FRTPWVPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHSK 460
Cdd:TIGR00906 497 PQNKQkvaFKVPLVPFLPALSILINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSL 556
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
16-458 5.20e-32

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 127.16  E-value: 5.20e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFtitgMGAA---QYAGPAITVSILIAAFcvtisALFF-----AEFSSRLPHSGGVYR 87
Cdd:COG1113    13 LKRGLKNRHIQMIALGGAIGTGLF----LGSGkaiALAGPAVLLSYLIAGL-----IVFLvmralGEMAVANPVSGSFSD 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  88 YLYTVFGEYPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKtfgiSLPTVLSGpfnpkngtyidivpVLLLFFVTAFVL 167
Cdd:COG1113    84 YAREYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFP----DVPQWVWA--------------LVFLVLLTAINL 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 168 LGVQTVLRFNSILVIFKLAVLLIFIALGL------------TAINVDNWSN---FAPYGFGqiyggkvGIMAGASLMFFA 232
Cdd:COG1113   146 LSVKLFGEFEFWFALIKVVAIVAFIVVGLlliffgfglpggPPAGLSNLWDhggFFPNGIG-------GVLAALQIVVFA 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 233 FLGFESISMAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNiTDVVPYV--LRSIGFPFIGNFVSIVV 310
Cdd:COG1113   219 FGGIELVGIAAAEAKDPEKTIPKAINSVIWRILLFYVGSLFVILALVPWNQIG-AGGSPFVtvFSLLGIPAAAGIMNFVV 297
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 311 IMTLVTVCISMMYALTRMIYNISCDGLLPEQFQELTpKSKVPKKATIF---VGLVTMFFSGVLQLEILALLVNIVTLAYL 387
Cdd:COG1113   298 LTAALSSLNSGLYSTSRMLYSLAERGDAPKFFGKLS-KRGVPVRAILLsavVLLIGVVLNYLLPEKAFTFLLSISGFGAL 376
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 388 ---ILLALGVIKLRK--DFGEPKEEEFRTPWVPFLPLLSI-----VIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYR 457
Cdd:COG1113   377 fvwLMILVSQLKFRRrlPREGAAALKFKMPGFPYTSYLTLaflaaVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRR 456

                  .
gi 2697442656 458 H 458
Cdd:COG1113   457 R 457
AA_permease_2 pfam13520
Amino acid permease;
20-450 4.43e-26

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 109.71  E-value: 4.43e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  20 LGLAELIFLGVGSIVGTGIFTITGMGAAqyaGPAITVSILIAAFCVTISALF-FAEFSSRLPHSGGVYRYLYTVFGEYPA 98
Cdd:pfam13520   1 LGLLSAFALVIGSVIGSGIFVAPLVASG---GPALIVWGWIAAIIFSLAVGLvYAELSSALPRSGGIYVYLENAFGKFVA 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  99 WIAGWFMIIEFAGAISTAASGWGEYLKAFLktfgislptvlsGPFNPKNGTYIDIVPVLLLFFVTAFVLLGVQTVLRFNS 178
Cdd:pfam13520  78 FLAGWSNWFAYVLGLASSASVAASYLLSAL------------GPDLVPTTWLTYGIAIAILIIFAIINIRGVRESAKIQN 145
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 179 ILVIFKLAVLLIF-IALGLTAINVDNWSNFAPYGFGQIYGGKVGIMAGASLMFFAFLGFESISMAADETKepQKKIPQGI 257
Cdd:pfam13520 146 ILGILKLLLPLILiIILGLVTADGGGFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVK--KRNVPKAI 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 258 FISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYV----LRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNIS 333
Cdd:pfam13520 224 FIGVIIVGVLYILVNIAFFGVVPDDEIALSSGLGQVaallFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALA 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 334 CDGLLPE-QFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILAL--LVNIVTLAYLI---LLALGVIKLRKDFGEPKEE 407
Cdd:pfam13520 304 RDGVLPFsRFFAKVNKFGSPIRAIILTAILSLILLLLFLLSPAAYnaLLSLSAYGYLLsylLPIIGLLILRKKRPDLGRI 383
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 2697442656 408 EFRTPWVPFLPLLSI-VIYLSLMTQCKAITWYGFIASFILGSLI 450
Cdd:pfam13520 384 PGRWPVAIFGILFSLfLIVALFFPPVGPATGSSLNYAIILIVAF 427
AA_permease pfam00324
Amino acid permease;
25-452 3.01e-25

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 107.79  E-value: 3.01e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  25 LIFLGVGSIVGTGIFTITGMGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGEYPAWIAGWF 104
Cdd:pfam00324   2 VQMIALGGVIGTGLFVGSGSVLGQAGPAGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWN 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 105 MIIEFagaISTAASGwgeylkaflktFGISLPTVLSGPFNPKNgTYIDIVPVLLLFFVTAFVLLGVQTVLRFNSILVIFK 184
Cdd:pfam00324  82 YWLSW---ITVLALE-----------LTAASILIQFWELVPDI-PYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIK 146
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 185 LAVLLIFIALGLTAINVDNWSNFAPYGFGQIYGGKV--------GIMAGASLMFFAFLGFESISMAADETKEPQKKIPQG 256
Cdd:pfam00324 147 IIAIIGFIIVGIILLSGGNPNDGAIFRYLGDNGGKNnfppgfgkGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKA 226
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 257 IFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPY-------VLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMI 329
Cdd:pfam00324 227 ILQVIWRITIFYILSLLAIGLLVPWNDPGLLNDSASaaspfviFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRML 306
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 330 YNISCDGLLPEQFqELTPKSKVPKKA---TIFVGLVTMFFSGVLQLEILALLVNIVTLAYLI---LLALGVIKLRKDFGE 403
Cdd:pfam00324 307 YSLARDGLAPKFL-KKVDKRGVPLRAilvSMVISLLALLLASLNPAIVFNFLLAISGLSGLIvwgLISLSHLRFRKAFKY 385
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2697442656 404 ----PKEEEFRT---PWVPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYF 452
Cdd:pfam00324 386 qgrsIDELPFKAplgPLGVILGLAAIIIILIIQFLYAFLPVPGGPKNWGAGSFAAA 441
frlA PRK11357
amino acid permease;
16-429 4.78e-25

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 107.25  E-value: 4.78e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQYAGPAITV-SILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFG 94
Cdd:PRK11357    6 LQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLTVlAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  95 EYPAWIAGWFMI-IEFAGAISTAASGWGEYLkaflktfgislptvlsGPFNPKNGTYIDIVPVLLLFFVTAFVLLGVQTV 173
Cdd:PRK11357   86 RPLAFLSGWASFwANDAPSLSIMALAIVSNL----------------GFLTPIDPLLGKFIAAGLIIAFMLLHLRSVEGG 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 174 LRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGQIyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKI 253
Cdd:PRK11357  150 AAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGAT-GSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTM 228
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 254 PQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDvVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALT----RMI 329
Cdd:PRK11357  229 PRALIGSCLLVLVLYTLLALVISGLMPFDKLANSE-TPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVmyqpRLE 307
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 330 YNISCDGLLPEQFQELTPKSKVPKKATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRKDfgEPKEEEF 409
Cdd:PRK11357  308 YAMAKDNLFFKCFGHVHPKYNTPDVSIILQGALGIFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWCRKR--DDYKPLW 385
                         410       420
                  ....*....|....*....|
gi 2697442656 410 RTPWVPFLPLLSIVIYLSLM 429
Cdd:PRK11357  386 RTPAFGLMTTLAIASSLILV 405
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
7-397 3.38e-23

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 102.13  E-value: 3.38e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656   7 TPMAPKKSYLQRRLGLAELIFLGVGSIVGTGIFtITGMGAAQYAGpAITVSILIAAFCVTIS---ALFFAEFSSRLPHSG 83
Cdd:TIGR00911  31 TVDGGEAVALKKEITLLSGVGIIVGTIIGSGIF-VSPKGVLKNAG-SVGLALIMWAVCGIFSivgALVYAELGTTIPKSG 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  84 GVYRYLYTVFGEYPAWIAGWF-MIIEFAGAISTAASGWGEYlkaFLKTFGISLPTvlsgpfnPKNGtyIDIVPVLLLFFV 162
Cdd:TIGR00911 109 GEYNYILEVFGPLLAFLRLWIeLLVIRPGSQAVNALNFAIY---ILTPVFPDCEV-------PEWA--IRLVAVLCVLLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 163 TAFVLLGVQTVLRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGQIYGGKVGIMAGASLM-FFAFLGFESISM 241
Cdd:TIGR00911 177 TLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVESLNPKNAFEGTETSAGGIVLAFYSgIWAYGGWNYLNF 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 242 AADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVLRSIGFPFIGNFVSIVVIMTLVTVCISM 321
Cdd:TIGR00911 257 VTEEVKNPYRTLPIAIIISMPIVTFIYVLTNIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGS 336
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2697442656 322 MYALTRMIYNISCDGLLPEQFQELTPKSKVPKKATIFVGLVTMFFsgvLQLEILALLVNIVTLAYLILLALGVIKL 397
Cdd:TIGR00911 337 LFSSSRLFFVGGREGHLPSLLSMIHVKRLTPLPSLLIVCTLTLLM---LFSGDIYSLINLISFANWLFNALAVAGL 409
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
184-460 2.65e-21

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 96.01  E-value: 2.65e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 184 KLAVLLIFIALGLTAI------NVDNWSNFApYGFGQIYGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQGI 257
Cdd:COG0833   160 KVITVIAFIIVGLLMIfgiiggHAPGFSNFT-TGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAI 238
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 258 ---FISIglvTLLYVAVTLILTGTVHYSKLNITdVVPYVL--RSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNI 332
Cdd:COG0833   239 rqvFWRI---LLFYILAIFVIAALIPYTDAGVA-ESPFTLvfERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSL 314
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 333 SCDGLLPEQFQELTpKSKVPKKA---TIFVGLVTMFFSGVLQLEILALLVNIVTLAYLI---LLALGVIKLRKDF----G 402
Cdd:COG0833   315 AKEGMAPKIFAKLN-KRGVPLNAllaTMAVGLLALLSSFFGAGTVYLWLLSISGLTGFIawlGIAISHYRFRRAYvaqgG 393
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2697442656 403 EPKEEEFRTPWVPFLPLLSIVIYL-SLMTQckAITWYGFIASFI---LGSLIYFGYGYRHSK 460
Cdd:COG0833   394 DLEDLKYKAPLFPFGPIFAFILCLiVIIGQ--AFDPEQRIALYIgipFFLACYLGYKLKKKT 453
PRK10238 PRK10238
aromatic amino acid transporter AroP;
16-438 1.43e-15

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 78.46  E-value: 1.43e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFtitgMGAA---QYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTV 92
Cdd:PRK10238   10 LKRGLKNRHIQLIALGGAIGTGLF----LGSAsviQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKY 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  93 FGEYPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKtfgiSLPTVLSGP-----FNPKNGTYIDIVPVLLLFFvtafvl 167
Cdd:PRK10238   86 WGSFAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYP----EIPTWVSAAvffvvINAINLTNVKVFGEMEFWF------ 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 168 lgvqTVLRFNSILVIFKLAVLLIFIALGLTAINVDN-WSN--FAPYGFGqiygGKVGIMAgasLMFFAFLGFESISMAAD 244
Cdd:PRK10238  156 ----AIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNlWDQggFLPHGFT----GLVMMMA---IIMFSFGGLELVGITAA 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 245 ETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNiTDVVPYVL--RSIGFPFIGNFVSIVVIMTLVTVCISMM 322
Cdd:PRK10238  225 EADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVT-ADTSPFVLifHELGDTFVANALNIVVLTAALSVYNSCV 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 323 YALTRMIYNISCDGLLPEQFQELTpKSKVPKKATIFVGLVT---MFFSGVLQLEILALLVNIVTLAYLI---LLALGVIK 396
Cdd:PRK10238  304 YCNSRMLFGLAQQGNAPKALASVD-KRGVPVNTILVSALVTalcVLINYLAPESAFGLLMALVVSALVInwaMISLAHMK 382
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2697442656 397 LRKdfgePKEEEFRTPWVP--FLPL--------LSIVIYLSLMTQCKAITWY 438
Cdd:PRK10238  383 FRR----AKQEQGVVTRFPalLYPLgnwicllfMAAVLVIMLMTPGMAISVY 430
PRK11387 PRK11387
S-methylmethionine permease;
8-426 1.33e-13

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 72.58  E-value: 1.33e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656   8 PMAPKKSYLQRRLGLAELIFLGVGSIVGTGIFTITGMGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGG--V 85
Cdd:PRK11387    4 PTSQQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAGTLLAYLIGALVVYLVMQCLGELSVAMPETGAfhV 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  86 Y--RYLYTVFGEYPAWIAgWFMIIEFAGAISTAASGWGEY--------LKAFLKTFGISLPTVLSGPFNPKNGTYIDIVP 155
Cdd:PRK11387   84 YaaRYLGPATGYTVAWLY-WLTWTVALGSSLTAAGFCMQYwfpqvpvwPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIK 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 156 VLLlffVTAFVLLGVQTVLRFnsilvifkLAVLLIFIALGLTAINVDNWsnfapygfgqIYGGKVGIMAGASLMFFAFLG 235
Cdd:PRK11387  163 VVT---ILAFIVLGGAAIFGF--------IPMQDGSPAPGLRNLTAEGW----------FPHGGLPILMTMVAVNFAFSG 221
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 236 FESISMAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDvVPYVL--RSIGFPFIGNFVSIVVIMT 313
Cdd:PRK11387  222 TELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQAGVEK-SPFVLvfEKVGIPYAADIFNFVILTA 300
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 314 LVTVCISMMYALTRMIYNISCDGLLPEQFQELTpKSKVPKKATIF--VGLVTMFFSGVLQLEILALLVNIVTLAYLILLA 391
Cdd:PRK11387  301 ILSAANSGLYASGRMLWSLSNEGTLPACFARLT-KRGIPLTALSVsmLGGLLALFSSVVAPDTVFVALSAISGFAVVAVW 379
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 2697442656 392 LGVI--------KLRKDFGEPKEEEFRTPWVPFLPLLSIVIYL 426
Cdd:PRK11387  380 LSICashfmfrrRHLRDGKALSELAYRAPWYPLTPILGFVLCL 422
PRK15049 PRK15049
L-asparagine permease;
17-429 2.23e-13

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 71.96  E-value: 2.23e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  17 QRRLGLAELIFLGVGSIVGTGIFTitGMGAA-QYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE 95
Cdd:PRK15049   27 HKAMGNRQVQMIAIGGAIGTGLFL--GAGARlQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGE 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  96 YPAWIAGWFMIIEFA--GAIS-TAASGWGEYLKAFlktfgislptvlsgpfnpkNGTYIDIVPVLLLFFVTAFVLLGVQT 172
Cdd:PRK15049  105 KAAYVAGWMYFINWAmtGIVDiTAVALYMHYWGAF-------------------GGVPQWVFALAALTIVGTMNMIGVKW 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 173 VLRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGQIY--GGKV--GIMAGASLM---FFAFLGFESISMAADE 245
Cdd:PRK15049  166 FAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITdnGGFFphGLLPALVLIqgvVFAFASIEMVGTAAGE 245
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 246 TKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDvVPYV--LRSIGFPFIGNFVSIVVIMTLVTVCISMMY 323
Cdd:PRK15049  246 CKDPQTMVPKAINSVIWRIGLFYVGSVVLLVMLLPWSAYQAGQ-SPFVtfFSKLGVPYIGSIMNIVVLTAALSSLNSGLY 324
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 324 ALTRMIYNISCDGLLPeQFQELTPKSKVPKK---ATIFVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVI---KL 397
Cdd:PRK15049  325 CTGRILRSMAMGGSAP-SFMAKMSRQHVPYAgilATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIASWAFIIVcqmRL 403
                         410       420       430
                  ....*....|....*....|....*....|....
gi 2697442656 398 RKDFGEPKEEE--FRTPWVPFLPLLSIVIYLSLM 429
Cdd:PRK15049  404 RKAIKEGKAADvsFKLPGAPFTSWLTLLFLLSVL 437
PRK10249 PRK10249
phenylalanine transporter; Provisional
16-416 1.59e-12

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 69.24  E-value: 1.59e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  16 LQRRLGLAELIFLGVGSIVGTGIFTitGMGAA-QYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFG 94
Cdd:PRK10249   19 LHRGLHNRHIQLIALGGAIGTGLFL--GIGPAiQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWG 96
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  95 EYPAWIAGWFMIIEFAGAISTAASGWGEYLKAFLKtfgiSLPT-VLSGPFnpkngtYIDIVPVLL----LFFVTAFVLlg 169
Cdd:PRK10249   97 PFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFP----DVPTwIWAAAF------FIIINAVNLvnvrLYGETEFWF-- 164
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 170 vqTVLRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFApygfGQIYGGKVGIMAGASLMFFAFLGFESISMAADETKEP 249
Cdd:PRK10249  165 --ALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYG----GFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDP 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 250 QKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNiTDVVPYVL--RSIGFPFIGNFVSIVVIMTLVTVCISMMYALTR 327
Cdd:PRK10249  239 EKSIPKAVNQVVYRILLFYIGSLVVLLALYPWVEVK-SNSSPFVMifHNLDSNVVASALNFVILVASLSVYNSGVYSNSR 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 328 MIYNISCDGLLPeQFQELTPKSKVPKKATIFVGLVT---MFFSGVLQLEILALLVNIVTLAYL---ILLALGVIKLRKDF 401
Cdd:PRK10249  318 MLFGLSVQGNAP-KFLTRVSRRGVPINSLMLSGAITslvVLINYLLPQKAFGLLMALVVATLLlnwIMICLAHLRFRAAM 396
                         410
                  ....*....|....*.
gi 2697442656 402 -GEPKEEEFRTPWVPF 416
Cdd:PRK10249  397 rRQGRETQFKALLYPF 412
PRK10197 PRK10197
GABA permease;
28-429 1.93e-12

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 68.88  E-value: 1.93e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  28 LGVGSIVGTGIFTITGMGAAQyAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGEYPAWIAGWFMII 107
Cdd:PRK10197    2 LSIAGVIGASLFVGSSVAIAE-AGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 108 EFAGAISTAASGWGEYLKAFLKtfgislptvlsgpfnpknGTYIDIVPVLLLFFVTAFVLLGVQTVLRFNSILVIFKLAV 187
Cdd:PRK10197   81 FWVLVIPLEANIAAMILHSWVP------------------GIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIA 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 188 LLIFIALGLTAIN-------------VDNWSNFAPYGFGqiyggkvGIMAGASLMFFAFLGFESISMAADETKEPQKKIP 254
Cdd:PRK10197  143 ILAFIFLGAVAISgfypyaevsgisrLWDSGGFMPNGFG-------AVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIV 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 255 QGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDVVPY--VLRSIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNI 332
Cdd:PRK10197  216 RATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYrsVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSL 295
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 333 SCDGLLPEQFQELTpKSKVPKKATI------FVGLVTMFFSGVLQLEILALLVNIVTLAYLILLALGVIKLRK----DFG 402
Cdd:PRK10197  296 SRRGDAPAVMGKIN-RSKTPYVAVLlstgaaFLTVVVNYYAPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKilraEGS 374
                         410       420
                  ....*....|....*....|....*..
gi 2697442656 403 EPKEEEFRTPWVPFLPLLSIVIYLSLM 429
Cdd:PRK10197  375 EIRLRMWLYPWLTWLVIGFITFVLVVM 401
PRK10836 PRK10836
lysine transporter; Provisional
182-454 2.54e-12

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 68.69  E-value: 2.54e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 182 IFKLAVLLIFIALGLTAI-------NVDNWSNF----APYGfgqiyGGKVGIMAGASLMFFAFLGFESISMAADETKEPQ 250
Cdd:PRK10836  161 LIKVTTVIVFIIVGVLMIigifkgaEPAGWSNWtigdAPFA-----GGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPA 235
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 251 KKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNI-------TDVVPY--VLRSIGFPFIGNFVSIVVIMTLVTVCISM 321
Cdd:PRK10836  236 KNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLlrndvkdISVSPFtlVFQHAGLLSAAAVMNAVILTAVLSAGNSG 315
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 322 MYALTRMIYNISCDGLLPEQFQELTpKSKVPKKA----TIFVGLVtmFFSGVL--QLEILALLVNIVTLAYLILLALGVI 395
Cdd:PRK10836  316 MYASTRMLYTLACDGKAPRIFAKLS-RGGVPRNAlyatTVIAGLC--FLTSMFgnQTVYLWLLNTSGMTGFIAWLGIAIS 392
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2697442656 396 KLRKDFG------EPKEEEFRTPWVPFLPLLSIVIYL--SLMTQCKA-----ITWYGFIASFI---LGSLIYFGY 454
Cdd:PRK10836  393 HYRFRRGyvlqghDLNDLPYRSGFFPLGPIFAFVLCLiiTLGQNYEAflkdtIDWGGVAATYIgipLFLIIWFGY 467
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
36-401 8.33e-12

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 67.08  E-value: 8.33e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  36 TGIFTITGMGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYLYTVFGE----YPAWIAGWFMIiefAG 111
Cdd:TIGR00907  31 TGISTTYNYGLSSGGAMSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPrqmpFASWMTGWFNL---AG 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 112 AISTAASgwGEYLKAFLKTFGISLPTVLSGpFNPKNgTYIDIVPVLLLFFVTAFVLLGVQTVLRFNSILVIFKLAVLLIF 191
Cdd:TIGR00907 108 QVAGTAS--TDLSVAQLILGIVSLTTPGRE-YIPTR-WHIFGIMIGIHLIHALINSLPTKWLPRITSSAAYWSLLGFLTI 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 192 IALGLTAINVDnwSNFAPYGFGQIYGGKVGIMAGASLMFFAFL-------GFESISMAADETKEPQKKIPQGIFISIGLV 264
Cdd:TIGR00907 184 CITLLACKSPK--FNDGKFVFTNFNNSTGGWKPGGFAFLLGLLnpawsmtGYDGTAHMAEEIENPEVVGPRAIIGAVAIG 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 265 TLLYVAVTLILTGTVHYSKLNITDVVPYVLRSIGFPFIGN-----FVSIVVIMTLVTVCISMMYALTRMIYNISCDGLLP 339
Cdd:TIGR00907 262 IVTGFCFNIVLFFSMGDIDSLISSTTGQPIAQIFYNALGNkagaiFLLCLILVTSFFCAITCMTANSRMIYAFSRDGGLP 341
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2697442656 340 EQ--FQELTPKSKVPKKATifvgLVTMFFSGVLQLEILA------LLVNIVT----LAYLILLALGVIKLRKDF 401
Cdd:TIGR00907 342 FSplWSRVNPRTQVPLNAV----WLSAVWIILIGLLGLGsstafqAIFSVCTvaldVSYVIPIICKLAKGRNTI 411
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
12-388 3.12e-10

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 61.92  E-value: 3.12e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  12 KKSYLQRRLGLaelifLGVGSIVGTGIFTITGMgAAQYAGPAITV-SILIAAFCVTISALFFAEFSSRLPHSGGVY---- 86
Cdd:TIGR00913   1 KKSLKQRHIQM-----IALGGTIGTGLLVGSGT-ALATGGPAGLLiGYAIMGSIIYCVMQSLGEMATFYPVVSGSFatya 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  87 -RYLYTVFGEYPAWIAGWFMIIEFAGAISTAASgwgeylkaFLKTFGISLPTvlsgpfnpkngtyiDIVPVLLLFFVTAF 165
Cdd:TIGR00913  75 sRFVDPAFGFAVGWNYWLQWLIVLPLELVTASM--------TIQYWTDKVNP--------------AVWIAIFYVFIVII 132
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 166 VLLGVQTVLRFNSILVIFKLAVLLIFIALGLT----------AINVDNWSN---FAPYGFGQIYGGKVGIMAGASlmfFA 232
Cdd:TIGR00913 133 NLFGVKGYGEAEFWFSSIKILAIIGFIILSIIlncgggpnhgYIGFRYWHDpgaFAGGTIGGRFKGVCSVFVTAA---FS 209
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 233 FLGFESISMAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHY--------SKLNITDVVPYV--LRSIGFPFI 302
Cdd:TIGR00913 210 FGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIGFLVPYndprllssSSSSDSAASPFViaIQNHGIKVL 289
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 303 GNFVSIVVIMTLVTVCISMMYALTRMIYNISCDGLLPEQFqeltpkSKVPKKATIFVGLVTMFFSGVL--------QLEI 374
Cdd:TIGR00913 290 PHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPKIF------AYVDRRGVPYVAVIVSSLFGLLaflavskkEAEV 363
                         410
                  ....*....|....
gi 2697442656 375 LALLVNIVTLAYLI 388
Cdd:TIGR00913 364 FTWLLNISGLSGFF 377
proY PRK10580
putative proline-specific permease; Provisional
10-367 3.14e-10

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 62.14  E-value: 3.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  10 APKKSYLQRRLGLAELIFLGVGSIVGTGIFTITGmGAAQYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGGVYRYL 89
Cdd:PRK10580    1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSA-DAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  90 YTVFGEYPAWIAGW---FMIIEFAGAISTAasgwgeylkaflktFGISLptvlsGPFNPKNGTYIDIVPVLLLffVTAFV 166
Cdd:PRK10580   80 QENLGPLAGYITGWtycFEILIVAIADVTA--------------FGIYM-----GVWFPTVPHWIWVLSVVLI--ICAVN 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 167 LLGVQTVLRFNSILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFGQIYG-------GKVGIMAGASLMFFAFLGFESI 239
Cdd:PRK10580  139 LMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGGQPTGIHNLWSnggffsnGWLGMVMSLQMVMFAYGGIEII 218
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 240 SMAADETKEPQKKIPQGIFiSIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYVL--RSIGFPFIGNFVSIVVIMTLVTV 317
Cdd:PRK10580  219 GITAGEAKDPEKSIPRAIN-SVPMRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLtfQHMGITFAASILNFVVLTASLSA 297
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|
gi 2697442656 318 CISMMYALTRMIYNISCDGLLPEQFqeltpkSKVPKKATIFVGLVTMFFS 367
Cdd:PRK10580  298 INSDVFGVGRMLHGMAEQGSAPKIF------SKTSRRGIPWVTVLVMTTA 341
AA_permease_C pfam13906
C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured ...
409-459 7.93e-09

C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured by the models pfam00324 and pfam13520.


Pssm-ID: 464034  Cd Length: 51  Bit Score: 51.43  E-value: 7.93e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2697442656 409 FRTPWVPFLPLLSIVIYLSLMTQCKAITWYGFIASFILGSLIYFGYGYRHS 459
Cdd:pfam13906   1 FKVPLVPFLPALSILVNIYLMVQLDSLTWIRFGIWMLIGLLIYFGYGIRHS 51
PRK11021 PRK11021
putative transporter; Provisional
20-379 1.16e-07

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 53.76  E-value: 1.16e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  20 LGLAELIFLGVGSIVGTGIFTITGMgAAQYAGPA--ITVSILIAAFCVTisALFFAEFSSRLPHSGGVYRYLYTVFGEYP 97
Cdd:PRK11021    1 LGLWQGIGLLSTSLLGTGVFAVPAL-AALVAGNNslWAWPLLILLIFPI--AIVFARLGRHFPHAGGPAHFVGMAFGPRL 77
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  98 AWIAGWFMI----IEFAGAISTAASGWGEylkaflkTFGISLPTVLsgpfnpkngtYIDIVPVLLLFFVTafvLLGVQT- 172
Cdd:PRK11021   78 GRVTGWLFLsvipVGLPAALQIAAGFGQA-------LFGWSSWQLL----------LAELLTLALLWLLN---LRGASSs 137
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 173 -VLRFNSILVIFKLAVLLIFIA------LGLTAINVDNWSNfapygfgqiyggkvgIMAGASLMFFAFLGFESISMAADE 245
Cdd:PRK11021  138 aNLQTVIALLIVALVVAIWWAGdikpadIPFPAPGSIEWSG---------------LFAALGVMFWCFVGIEAFAHLASE 202
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 246 TKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITDV-VPYVLRSIgfpfIGNFVSIVVIMTLVTVCISMM-- 322
Cdd:PRK11021  203 FKNPERDFPRALMIGLLLAGLVYWACTVVVLHFPAYGDKQAAAAsLPGIFVQL----FGGYALWVICVIGYLACFASVni 278
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2697442656 323 YA--LTRMIYNISCDGLLPEQFQELTPKsKVPKKATIFVG---LVTMFFSGVLQLEILALLV 379
Cdd:PRK11021  279 YTqsFARLVWSQAREGRPPSYLARLSAR-GVPVNALNAVLgccAVSILLIYALGLNLEALIA 339
PRK10644 PRK10644
arginine/agmatine antiporter;
18-288 1.99e-07

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 53.26  E-value: 1.99e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  18 RRLGLAELIFLGVGSIVGTGIFTITgmgaaqyAGPAITVSILIAAFCVTIS-----ALFFAEFSSRLPHSGGVYRYLYTV 92
Cdd:PRK10644    8 HKVGLIPVTLMVAGNIMGSGVFLLP-------ANLASTGGIAIYGWLVTIIgalglSMVYAKMSSLDPSPGGSYAYARRC 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  93 FGEYPA-------WIAGWFmiiefaGAISTAASGWGeYLKAFLKTfgISLPTVLSgpfnpkngtyidIVPVLLLFFVTAF 165
Cdd:PRK10644   81 FGPFLGyqtnvlyWLACWI------GNIAMVVIGVG-YLSYFFPI--LKDPLVLT------------ITCVVVLWIFVLL 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 166 VLLGVQTVLRFNSILVIFKLAVLLIFIALG---------LTAINVDNWSNFApygfgqiyggkvGIMAGASLMFFAFLGF 236
Cdd:PRK10644  140 NIVGPKMITRVQAVATVLALIPIVGIAVFGwfwfrgetyMAAWNVSGLGTFG------------AIQSTLNVTLWSFIGV 207
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2697442656 237 ESISMAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNITD 288
Cdd:PRK10644  208 ESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSSTAIMGMIPNAALRVSA 259
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
218-358 2.73e-07

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 52.81  E-value: 2.73e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 218 GKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQGIFiSIGLVTLLYVAVTLILTGTVHYSKLNITDVVPYV--LR 295
Cdd:PRK11049  209 GLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVelFV 287
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2697442656 296 SIGFPFIGNFVSIVVIMTLVTVCISMMYALTRMIYNISCDGLLPEQFQELTpKSKVPKKATIF 358
Cdd:PRK11049  288 LVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLS-KRAVPAKGLTF 349
PRK10746 PRK10746
putative transport protein YifK; Provisional
9-352 3.29e-05

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 45.96  E-value: 3.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656   9 MAPKKSYLQRRLGLAELIFLGVGSIVGTGIFtitgMGAA---QYAGPAITVSILIAAFCVTISALFFAEFSSRLPHSGG- 84
Cdd:PRK10746    1 MADNKPELQRGLEARHIELIALGGTIGVGLF----MGAAstlKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSf 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  85 ---VYRYLYTVFGEYPAWiAGWFMIIEFAGAISTAAsgwGEYLKAFLKTFGISLPTVLSgpfnpkngtyidiVPVLLLFF 161
Cdd:PRK10746   77 avyAHRYMSPFFGYLTAW-SYWFMWMAVGISEITAI---GVYVQFWFPEMAQWIPALIA-------------VALVALAN 139
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 162 VTAFVLLGVQ----TVLRFNSILVIFKLAVLLIFIALG--LTAINVDNWSNFApygfGQIYGGKVGIMAGASLMFFAFLG 235
Cdd:PRK10746  140 LAAVRLYGEIefwfAMIKVTTIIVMIVIGLGVIFFGFGngGQSIGFSNLTEHG----GFFAGGWKGFLTALCIVVASYQG 215
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 236 FESISMAADETKEPQKKIPQGIFISIGLVTLLYVAVTLILTGTVHYSKLNiTDVVPYVLR--SIGFPFIGNFVSIVVIMT 313
Cdd:PRK10746  216 VELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIG-SNGSPFVLTfaKIGITAAAGIINFVVLTA 294
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 2697442656 314 LVTVCISMMYALTRMIYNISCDGLLPEQFQELTpKSKVP 352
Cdd:PRK10746  295 ALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVS-RHGVP 332
PRK15238 PRK15238
inner membrane transporter YjeM; Provisional
59-269 3.01e-04

inner membrane transporter YjeM; Provisional


Pssm-ID: 237929 [Multi-domain]  Cd Length: 496  Bit Score: 43.01  E-value: 3.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  59 LIAAFCVTI-SALFFAEFSSRLPH-SGGVYRYLYTVFGEYPAWIaGWFMIieFAGAI----STAASGWgeylkaflktfg 132
Cdd:PRK15238   44 ILSAILFFIpFALMMAEYGSAFKDeKGGIYSWMNKSVGPKFAFI-GTFMW--FASYIiwmvSTASKIW------------ 108
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 133 ISLPTVLSG-------PFNPKNGT-YIDIVPVLLLFFVTAFVLLGVQTVLRFNSILVIFKLAVLLIFIaLGLTAINVDNW 204
Cdd:PRK15238  109 IPFSTFIFGkdttqtwHFLGLNSTqVVGILAVIWMILVTFVASKGINKIAKVTSIGGIAVMLLNIVLL-LVSIIILILNG 187
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2697442656 205 SNFA-PYGFGQI-------YGGKVGIMAGASLMFFAFLGFESISMAADETKEPQKKIPQGIFISIGLVTLLYV 269
Cdd:PRK15238  188 GHFAqPIGVSSFvtspnpaYQSPIAVLSFVVFAIFAYGGIEAVGGLVDKTENPEKNFPKGIIIAAIVISIGYS 260
Spore_permease pfam03845
Spore germination protein;
19-274 1.11e-03

Spore germination protein;


Pssm-ID: 281794  Cd Length: 321  Bit Score: 41.08  E-value: 1.11e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  19 RLGLAELIFLGVGSIVGTGIFTITGMGAAQyAGPAITVSILIAAFCVTISALFFAEFSSRLPhSGGVYRYLYTVFGEYPA 98
Cdd:pfam03845   1 KISTKQTFFLIVSFQLGSGILTLPRSVAEQ-AGPDGWISVLLAGIIGLILVYLYYYLLKKFP-EKTLIEYMKKILGKWLG 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656  99 WIAGWFMIIEFAGAISTAASGWGEYLKAFLKTFgisLPTvlsgpfnpkngtyidIVPVLLLFFVTAFVL-LGVQTVLRFN 177
Cdd:pfam03845  79 SLLSILFMLYFLYIAGRVLRIFSEVIQFFLLPD---TPT---------------WIIILTLLLVSLYLIsKGIEVLAREF 140
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2697442656 178 SILVIFKLAVLLIFIALGLTAINVDNWSNFAPYGFgqiyggkVGIMAGASLMFFAFLGFESISMAADETKEPqKKIPQGI 257
Cdd:pfam03845 141 CFIIPILLIILLLILLFSLKIAHIDNLRPVLGNGI-------SPVLKGLKVTSLPFGGFEILLMLYPFMKDK-KKSKKAA 212
                         250
                  ....*....|....*..
gi 2697442656 258 FISIGLVTLLYVAVTLI 274
Cdd:pfam03845 213 LLGVGISGLLYTLTTII 229
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH