|
Name |
Accession |
Description |
Interval |
E-value |
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2792-3193 |
1.94e-46 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 177.08 E-value: 1.94e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2792 SNNLGSATIPVIYQEPDLQVTNLIVPETSpTSGQTLGVSWTVKNIGTRDTRESSWYDrvylsrdeslDFNDTFLGEFTR- 2870
Cdd:COG1572 117 NENNNTVAVLISSGKPDLVVTSVTAPSTL-TPGTTITVSVTVNNQGSAPANGSSVDF----------DASDTLLGSFTVa 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2871 RGGLQQGQSYTGSSQITLPDGIAGNFYLLVFTDaninqqynklgfegnsTFARVPEFrDEGNNITAAPMKVVLQPPPDLQ 2950
Cdd:COG1572 186 SLTLAAGASYTFNPTLTLPVTASGNYYLLVVAD----------------PDNYVLET-NETNNTTAAAEITVSGTPPDLT 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2951 VTSVIIPERATSGQSFNIKYTVENKGTGNTPTrqnrWNDLIYLSRDEFLDLQsdrylgyvehTGGLTAGSSYTVNQTLQL 3030
Cdd:COG1572 249 VTSVTAPSTVVEGDTITVSATVKNQGTAAAGA----TTVAFYLSGDPVGTAS----------VGALAAGASYTVTVTITL 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3031 PNDlVGSYYVFVITDAPQSsagglVFEGNNEGNNATpslQPLVLELPPPADLQVDEITIPSNAKSGESVQISWKVTNYGD 3110
Cdd:COG1572 315 PAN-AGTYYLLAVVDPDNQ-----VAESNETNNVAS---SAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGT 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3111 NPASGQWsDAVYLSADAVWDINdrpigrvsYSGNLASGAEYTSTltaILPPATPGQYRIIVRPDIFNQVYEAeNEANNRT 3190
Cdd:COG1572 386 AAASGFT-VTLYLSGDATTDLT--------YVGSLAAGASYTVT---ISVTTASGQYYLLVVADPDNYVGES-NENNNVF 452
|
...
gi 2711936800 3191 TSA 3193
Cdd:COG1572 453 AVS 455
|
|
| NUC1 |
COG1864 |
DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]; |
8056-8329 |
2.89e-41 |
|
DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism];
Pssm-ID: 441469 Cd Length: 238 Bit Score: 154.68 E-value: 2.89e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8056 DNVAYKSKHLKFGNPKEARysdtdpNPYKDNLLLERPQYTLSFNGTTNTANWASWQLDKYWFyikgkgypIADQQNKRNF 8135
Cdd:COG1864 1 DDAGYDPDFLLLGLPSLAR------ALSTNNYLLCYTGYSLSYNESRRTPNWVAYNLDGSWL--------GKSLKRSDDF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8136 AKDPTLPPGFAAITDPYGakvdGISYDGGHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGn 8215
Cdd:COG1864 67 RPDPRLPSGYRATLADYT----GSGYDRGHLAPSADRTFSKEANSETFLMTNISPQAPDFNQGIWARLENYVRDLARKG- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8216 KEVYITAGtdGIkklkDGSGEAKVIGSGGdITIPENIWMAmlVIDPDKEPTNNSyTIGFYLENREYSRpsnnaagisstp 8295
Cdd:COG1864 142 GEVYVVTG--PV----FDDGDLKTIGSGG-VAVPTAFWKV--VVDPDKNTGTLR-AIAFLLPNTALSS------------ 199
|
250 260 270
....*....|....*....|....*....|....
gi 2711936800 8296 NEWKLTVKSVNWIENKTGYDLFSNIDKTFQDEIE 8329
Cdd:COG1864 200 GPLRTYQVSVDEIEKLTGLDFFPNLPDDLEAALE 233
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9380-9744 |
1.29e-38 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 162.13 E-value: 1.29e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9380 VSNVAPIVDAGADLTTDEGTAITFNGN-FTDP-GilDTHTITWDFGDGT--TAEGTLTPNHVFF-----NNGVYSVKLTV 9450
Cdd:NF038112 1183 VCNRRPVANAGPDQTVLERTTVTLNGSgSFDPdG--DPLTYAWTQVSGPavTLTGADTATPSFTapevtADTVLTFQLVV 1260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9451 KDNDGGENSDTLTVSVNNV--APTItNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTdAVIGSNVNHIFAD-- 9526
Cdd:NF038112 1261 SDGTKTSAPDTVTVLVRNVnrAPVA-VAGAPATVDERSTVTLDGSGTDADGDALTYAWTQTSGP-AVTLTGATTATATft 1338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9527 ------NGNYTVTLTVQDpdGAAT-QQTLTLSVSNV--APIVNAGADFTTDEGSAVTFNGNFTDPGiLDTHTIIWDFGDG 9597
Cdd:NF038112 1339 apevtaDTQLTFTLTVSD--GTASaTDTVTVTVRNVnrAPVANAGADQTVDERSTVTLSGSATDPD-GDALTYAWTQTAG 1415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9598 TTLEYTpHAPTPPHSPLTPThiYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDT-NVDEGTPAYFSATA 9676
Cdd:NF038112 1416 PTVTLT-GADTATASFTAPE--VAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESiTVDEGSTVTLDASA 1492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9677 TDPGNDTLTYTWNfgdgtdAVVGQNVNHTFADNGIYTVT-------------LTVSDEDGASTTKTLSTKVNNVAPTVAA 9743
Cdd:NF038112 1493 TDPDGDTLTYAWT------QVAGPSVTLTGADSAKLTFTapevsadttltfsLTVTDGSGSSGPVVVTVTVKNVNRAPDG 1566
|
.
gi 2711936800 9744 G 9744
Cdd:NF038112 1567 G 1567
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9011-9823 |
2.93e-37 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 157.94 E-value: 2.93e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9011 TFVGTDTFTYIILDNNAISN-EATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGK 9089
Cdd:TIGR00864 1055 IYAAPGEYLATVLASNAFENiSQQINMSVRAILPRVAIGTEDGLLLAGKPADFEAHPLPSPGGIHYEWDFGDGSALLQGR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9090 Q--VNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIpKAGADITTDEGTAITfngsfIDPGIKDTHTITWDF-- 9165
Cdd:TIGR00864 1135 QpaAAHTFAKRGPFHVCLEVNNTISGAAACADMFAFEEIEGL-SADMSLATELGAATT-----VRAALQSGDNITWTFdm 1208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9166 GDGTTATGIlNPT--HTYNQDGVYTATLTVTdNDGATNSNSLTVTVNNIDPIINDISGDTNiNEGATAKFTATATNPSNd 9243
Cdd:TIGR00864 1209 GDGKSLSGP-EATveHKYAKAGNCTVNIGAA-NAAGHGARIIHVEVFVFEVAGIEPAACIG-EHADANFRARVSGNAAH- 1284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9244 tLTYTWNFGDDT--DPVVGQ-TVNHIFAQDGNYTVTLTVTdtsNGITSETLTVSVnNAAPIITNIS---GDTNINEGATA 9317
Cdd:TIGR00864 1285 -YLFDWSFGDGSpnETHHGCpGISHNFRGNGTFPLALTIS---SGVNKAHFFTQI-CVEPELGKISlqaEKQFFALGDEA 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9318 NFTATATDPGNdsITYTWDFGNG----ITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLtvnVSNVAPIVDAGADL 9393
Cdd:TIGR00864 1360 QFQACAEPEFN--YRYEWDFGGEeaapLPAAGAEVTFIYNDPGCYLVTVAASNNISAANDSAL---IEVLEPVGATSFKH 1434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9394 TTDEGTAITFNGN--FTDPGILDTHTITWDFGDGTTAEGtltPN--HVFFNNGVYSVKLTVKdNDGGENSDTLTVSVNNV 9469
Cdd:TIGR00864 1435 NGSHGNNLELGQPylFSAFGRARNASYLWDFGDGGLLEG---PEilHAFNSPGDFNIRLAAA-NEVGKNEATLNVAVKAR 1510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9470 APTITNVAGDINIEEGATATFSAiATDPGNDtLTYTWDFGDGTDAVIGSN-VNHIFADNGNYTVTLTVQDPDGAATQQTL 9548
Cdd:TIGR00864 1511 VRGLTINASLTNVPLNGSVHFEA-HLDAGDD-VRFSWILCDHCTPIFGGNtIFYTFRSVGTFNIIVTAENDVGAAQASIF 1588
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9549 TLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDpgilDTHTIIWD--FGDGTTLEYT--------PHAPTPPHSPLTPTH 9618
Cdd:TIGR00864 1589 LFVLQEIEGLQILGETAEGGGGGVQELDGCYFE----TNHTVQFHagFKDGTNLSFSwnaildnePDGPAFAGSGKGAKL 1664
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9619 IYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTnvdEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVV 9698
Cdd:TIGR00864 1665 NPLEAGPCDIFLQAANLLGQATADCTIDFLEPAGNLMLAASDNP---AAVNALINLSAELAEGSGLQYRWFLEEGDDLET 1741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9699 GQN-VNHTFADNGIYTVTLTVSDEDG---ASTTKTLSTKVNNVAPTVA-AGDNQIMYIGETVAFWGQftdpgiLDTHT-V 9772
Cdd:TIGR00864 1742 SEPfMSHSFPSAGLHLVTMKAFNELGsanASEEVDVQEPISGLKIRAAdAGEQNFFAADSSVCFQGE------LATGTnV 1815
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 9773 VWDFG-DSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTnNTLTVTVKKP 9823
Cdd:TIGR00864 1816 SWCWAiDGGSSKMGKHACMTFPDAGTFAIRLNASNAVSGKS-ASREFFAEEP 1866
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2262-2653 |
1.42e-33 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 138.95 E-value: 1.42e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2262 LTPRPDLQVKSITAPTTANAGGTISLEFVVANEGTVGTTTPNWQDrvylsldnkiSYDDLSLGSFSNAAA-LGSGESYrT 2340
Cdd:COG1572 128 SSGKPDLVVTSVTAPSTLTPGTTITVSVTVNNQGSAPANGSSVDF----------DASDTLLGSFTVASLtLAAGASY-T 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2341 QANTLVIPKYFRGKAYLIVQTDAAGQVDEYPQESNNIQAIEININSLPPaDLVTSQVIAPTLAFEGSKIKVRYTVTNLGI 2420
Cdd:COG1572 197 FNPTLTLPVTASGNYYLLVVADPDNYVLETNETNNTTAAAEITVSGTPP-DLTVTSVTAPSTVVEGDTITVSATVKNQGT 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2421 GETdrEVWTDTIWLtrdknrpspanrdgGAEDILLTSVGhsgSLKVGESYETEVELTlASQVTGEWYITPWSDAYNIVLE 2500
Cdd:COG1572 276 AAA--GATTVAFYL--------------SGDPVGTASVG---ALAAGASYTVTVTIT-LPANAGTYYLLAVVDPDNQVAE 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2501 DTlsinnnpddpnelDNNNYKARPITILLTPPPDLVVTSVTPTTQALGGQPFSVTWTVQNQGANATaqSNWVDNVYLSDS 2580
Cdd:COG1572 336 SN-------------ETNNVASSAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGTAAA--SGFTVTLYLSGD 400
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 2581 PTLnapgakrwflgSVGHDGSLGVGGTYTgqlETILTPGASGRY-IIVQTNYGNSVWEGPyTDNNQRSAETNVT 2653
Cdd:COG1572 401 ATT-----------DLTYVGSLAAGASYT---VTISVTTASGQYyLLVVADPDNYVGESN-ENNNVFAVSINVN 459
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
1875-2242 |
1.52e-32 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 135.87 E-value: 1.52e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1875 GGEENNNADKFIQLELASYADLAVNNVTVEElTIGDPATVSVSWTVTNLGKGSGKTSTWIDriiastdeklgNTDDIVLA 1954
Cdd:COG1572 113 AGESNENNNTVAVLISSGKPDLVVTSVTAPS-TLTPGTTITVSVTVNNQGSAPANGSSVDF-----------DASDTLLG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1955 NFTH-EGFLNDNEKYTRTERLRLTPGFQGRYKLFVQTDATEVVFENNlETNNTASAPNTfsVVPIPYADLLVSRVQAQAT 2033
Cdd:COG1572 181 SFTVaSLTLAAGASYTFNPTLTLPVTASGNYYLLVVADPDNYVLETN-ETNNTTAAAEI--TVSGTPPDLTVTSVTAPST 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2034 ASSGQQMQVSWSVTNsgIGTTNSNSWSDRVFLTSDPEGqniiadlgsFEHAGALAIGGNYNRSVDVTLPNGiSGNYYIVV 2113
Cdd:COG1572 258 VVEGDTITVSATVKN--QGTAAAGATTVAFYLSGDPVG---------TASVGALAAGASYTVTVTITLPAN-AGTYYLLA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2114 TT---GGPFEFIYTNNNSriSNAIAVTFTPPPDLTVTNVTSPSNAQSGNKIDISWTVANSGTGDAVGSWtDQVFLKEVGG 2190
Cdd:COG1572 326 VVdpdNQVAESNETNNVA--SSAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGTAAASGFT-VTLYLSGDAT 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 2191 SeqlislgTFNYGNGLQAGKFYSrfeQFTLPSTIQGLYEVVVKTNTSNSLYE 2242
Cdd:COG1572 403 T-------DLTYVGSLAAGASYT---VTISVTTASGQYYLLVVADPDNYVGE 444
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9181-9809 |
2.42e-31 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 138.29 E-value: 2.42e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9181 YNQDGVYTATLTVTdNDGATNSNSLTVTVNNIDPIIN-DISGDTNI-NEGATAKFTATATNPSNDTLTYTWNFGDD---- 9254
Cdd:TIGR00864 947 YQHAAVFKLSLTAM-NHVSNLTEDFNVTVDRLNPMQGlQVKGVPAVlPPGATLALTAGVLIDMAVEAAFLWSFGDGeqal 1025
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9255 -------------TDPVVGQ-----TVNHIFAQDGNYTVTLTVTDTSNGITsETLTVSVNNAAPIITNISGDTNINEGAT 9316
Cdd:TIGR00864 1026 fefkppynesfpcPDPSPAQvllehNVMHIYAAPGEYLATVLASNAFENIS-QQINMSVRAILPRVAIGTEDGLLLAGKP 1104
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9317 ANFTATATdPGNDSITYTWDFGNG---ITKTGENVSHEFADEGTYNVTLTVQDS-DGAATQ---------ETLTVNVSnv 9383
Cdd:TIGR00864 1105 ADFEAHPL-PSPGGIHYEWDFGDGsalLQGRQPAAAHTFAKRGPFHVCLEVNNTiSGAAACadmfafeeiEGLSADMS-- 1181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9384 apivdagadLTTDEGTAITFNGNFTDPgilDTHTITWDFGDGTTAEGT-LTPNHVFFNNGVYSVKLTVKDNDG-GENSDT 9461
Cdd:TIGR00864 1182 ---------LATELGAATTVRAALQSG---DNITWTFDMGDGKSLSGPeATVEHKYAKAGNCTVNIGAANAAGhGARIIH 1249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9462 LTVSVNNVAptitNVAGDINIEEGATATFSAIATdpGN-DTLTYTWDFGDGT--DAVIGS-NVNHIFADNGNYTVTLTVQ 9537
Cdd:TIGR00864 1250 VEVFVFEVA----GIEPAACIGEHADANFRARVS--GNaAHYLFDWSFGDGSpnETHHGCpGISHNFRGNGTFPLALTIS 1323
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9538 DPDGAA---TQQTLTLSVSNVApiVNAGADFTTdEGSAVTFNGNFTDPGildTHTIIWDFGdgttleyTPHAPTPPHSPL 9614
Cdd:TIGR00864 1324 SGVNKAhffTQICVEPELGKIS--LQAEKQFFA-LGDEAQFQACAEPEF---NYRYEWDFG-------GEEAAPLPAAGA 1390
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9615 TPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGD--TNVDEGTPAYFSATATdpgNDTLTYTWNFGD 9692
Cdd:TIGR00864 1391 EVTFIYNDPGCYLVTVAASNNISAANDSALIEVLEPVGATSFKHNGShgNNLELGQPYLFSAFGR---ARNASYLWDFGD 1467
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9693 GtDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFtDPGilDTHTV 9772
Cdd:TIGR00864 1468 G-GLLEGPEILHAFNSPGDFNIRLAAANEVGKNEATLNVAVKARVRGLTINASLTNVPLNGSVHFEAHL-DAG--DDVRF 1543
|
650 660 670
....*....|....*....|....*....|....*...
gi 2711936800 9773 VWDFGDSNT-VAGTLRPTHIYNSNGTYSVTLTVTDDDG 9809
Cdd:TIGR00864 1544 SWILCDHCTpIFGGNTIFYTFRSVGTFNIIVTAENDVG 1581
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
1598-2013 |
1.09e-28 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 124.31 E-value: 1.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1598 INNNSNSSIVFTPESGINYKVRVTSDFSDVTGTYTLNSQTKAPDLIVKSVFTPPTASIGQTTDISWTVANTGSLSATQAW 1677
Cdd:COG1572 90 DVGTGPNTGAQTATATGGYADGNAGESNENNNTVAVLISSGKPDLVVTSVTAPSTLTPGTTITVSVTVNNQGSAPANGSS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1678 TDrvylikentngtfdgvtLPSSAIFLDILRHETGLAANDEYTTPVRKVLLPEVEDGDYRIVVITDFDNSILEGKDENNL 1757
Cdd:COG1572 170 VD-----------------FDASDTLLGSFTVASLTLAAGASYTFNPTLTLPVTASGNYYLLVVADPDNYVLETNETNNT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1758 RVSEQV-LSIGHVDLVPTIIYSPATATSGTTIPLKWSVTNNGSAdTVGGWVDRIYLSSDTkfdpsdlllTERKYNGSLSS 1836
Cdd:COG1572 233 TAAAEItVSGTPPDLTVTSVTAPSTVVEGDTITVSATVKNQGTA-AAGATTVAFYLSGDP---------VGTASVGALAA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1837 GATTDElELNIAIPLDVSSdryRYLLVVTDADNQIKELgGEENNNADKFIQLELASYADLAVNNVTV-EELTIGDpaTVS 1915
Cdd:COG1572 303 GASYTV-TVTITLPANAGT---YYLLAVVDPDNQVAES-NETNNVASSAITVVGPPPPDLVVTSVSApSTATAGS--SVT 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1916 VSWTVTNlgKGSGKTSTWIDRIIASTDEKLGNtddivlanfTHEGFLNDNEKYTRTERLRLTPgfqGRYKLFVQTDATEV 1995
Cdd:COG1572 376 VSVTVKN--QGTAAASGFTVTLYLSGDATTDL---------TYVGSLAAGASYTVTISVTTAS---GQYYLLVVADPDNY 441
|
410
....*....|....*...
gi 2711936800 1996 VFENNlETNNTASAPNTF 2013
Cdd:COG1572 442 VGESN-ENNNVFAVSINV 458
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9125-9472 |
3.03e-28 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 127.85 E-value: 3.03e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9125 NIAPIPKAGADITTDEGTAITFNGS-FIDPGiKDTHTITWDFGDGTTAT----GILNPTHT---YNQDGVYTATLTVTDN 9196
Cdd:NF038112 1185 NRRPVANAGPDQTVLERTTVTLNGSgSFDPD-GDPLTYAWTQVSGPAVTltgaDTATPSFTapeVTADTVLTFQLVVSDG 1263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9197 DGATNSNSLTVTVNNID--PIINdISGDTNINEGATAKFTATATNPSNDTLTYTWN--------FGDDTDPVVGQTVNHI 9266
Cdd:NF038112 1264 TKTSAPDTVTVLVRNVNraPVAV-AGAPATVDERSTVTLDGSGTDADGDALTYAWTqtsgpavtLTGATTATATFTAPEV 1342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9267 FAqDGNYTVTLTVTDtsnGITSETLTVSVN----NAAPIItNISGDTNINEGATANFTATATDPGNDSITYTWD--FGNG 9340
Cdd:NF038112 1343 TA-DTQLTFTLTVSD---GTASATDTVTVTvrnvNRAPVA-NAGADQTVDERSTVTLSGSATDPDGDALTYAWTqtAGPT 1417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9341 ITKTGEN-VSHEF-ADEGTYNVTLTVQ--DSDGAATQETLTVNVS----NVAPIVDAGADLTTDEGTAITFNGNFTDP-G 9411
Cdd:NF038112 1418 VTLTGADtATASFtAPEVAADTELTFQltVSADGQASADVTVTVTvrnvNRAPVAHAGESITVDEGSTVTLDASATDPdG 1497
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9412 ilDTHTITWDFGDGT--TAEGTLTPNHVFFNNGVYS-----VKLTVKDNDGGENSDTLTVSVNNVAPT 9472
Cdd:NF038112 1498 --DTLTYAWTQVAGPsvTLTGADSAKLTFTAPEVSAdttltFSLTVTDGSGSSGPVVVTVTVKNVNRA 1563
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
8834-10413 |
8.92e-27 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 122.95 E-value: 8.92e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8834 TILDTHLGTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVK 8913
Cdd:COG3210 115 TLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8914 IDISSITPGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTN 8993
Cdd:COG3210 195 TGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIG 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8994 GSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDL 9073
Cdd:COG3210 275 TTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGT 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9074 TYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDP 9153
Cdd:COG3210 355 TGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLG 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9154 GIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKF 9233
Cdd:COG3210 435 ITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGL 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9234 TATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINE 9313
Cdd:COG3210 515 TGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGT 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9314 GATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADL 9393
Cdd:COG3210 595 NSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGT 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9394 TTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTI 9473
Cdd:COG3210 675 TGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNA 754
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9474 TNVAGDINIEEGATATFSAIATDPGNDTL-TYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSV 9552
Cdd:COG3210 755 GTLSIGLTANTTASGTTLTLANANGNTSAgATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTG 834
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9553 SNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTV 9632
Cdd:COG3210 835 DTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLA 914
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9633 RDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIY 9712
Cdd:COG3210 915 TVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAAT 994
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9713 TVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIY 9792
Cdd:COG3210 995 GILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTA 1074
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9793 NSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGS 9872
Cdd:COG3210 1075 ASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAV 1154
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9873 DYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITDKTITESDNGT 9952
Cdd:COG3210 1155 AGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATG 1234
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9953 TTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATI 10032
Cdd:COG3210 1235 GSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATV 1314
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10033 TDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGET 10112
Cdd:COG3210 1315 GTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAE 1394
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10113 SQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINGSGDFDGNPLDLYDDTLIY 10192
Cdd:COG3210 1395 GTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAG 1474
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10193 AAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLVPPQIVEPQTIIVPAYASVKQQ 10272
Cdd:COG3210 1475 NAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGS 1554
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10273 ELERRIPTGATTLTFNMQQNPMNNAADWAKKFPPSGTASNPTVVRVTGGGLNIPANVSLNNYVIIVEQGDINFNGSGHNL 10352
Cdd:COG3210 1555 EGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVV 1634
|
1530 1540 1550 1560 1570 1580
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 10353 NNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITFNGATST 10413
Cdd:COG3210 1635 TTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGD 1695
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9125-9209 |
6.22e-26 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 105.05 E-value: 6.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9125 NIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGiLNPTHTYNQDGVYTATLTVTDNDGA-TNSN 9203
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-ANVSHTYAAPGTYTVTLTVTDDSGAsNSTA 79
|
....*.
gi 2711936800 9204 SLTVTV 9209
Cdd:pfam18911 80 TDTVTV 85
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9056-9400 |
6.65e-24 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 113.60 E-value: 6.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9056 EGTTATFSAIA-TDP-GNDLTYTWNfgdgsnPVTGKQVNHTFADNGT---------YTAI----LTVTD---TAGASTVE 9117
Cdd:NF038112 1200 ERTTVTLNGSGsFDPdGDPLTYAWT------QVSGPAVTLTGADTATpsftapevtADTVltfqLVVSDgtkTSAPDTVT 1273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9118 TLLLNVNNiAPIPKAGADITTDEGTAITFNGSFIDPGiKDTHTITWDFGDGTTAT----GILNPTHTYNQ---DGVYTAT 9190
Cdd:NF038112 1274 VLVRNVNR-APVAVAGAPATVDERSTVTLDGSGTDAD-GDALTYAWTQTSGPAVTltgaTTATATFTAPEvtaDTQLTFT 1351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9191 LTVTDNdGATNSNSLTVTVNNID--PIINDISgDTNINEGATAKFTATATNPSNDTLTYTWNfgddtdPVVGQTVNHIFA 9268
Cdd:NF038112 1352 LTVSDG-TASATDTVTVTVRNVNraPVANAGA-DQTVDERSTVTLSGSATDPDGDALTYAWT------QTAGPTVTLTGA 1423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9269 QD-----------GNYTVTLTVTDTSNGITSETLTVSVN----NAAPIItNISGDTNINEGATANFTATATDPGNDSITY 9333
Cdd:NF038112 1424 DTatasftapevaADTELTFQLTVSADGQASADVTVTVTvrnvNRAPVA-HAGESITVDEGSTVTLDASATDPDGDTLTY 1502
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 9334 TWDF--GNGITKTGEN------VSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTA 9400
Cdd:NF038112 1503 AWTQvaGPSVTLTGADsakltfTAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNRAPDGGGCSSTGGSPG 1577
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9382-9466 |
3.36e-23 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 97.34 E-value: 3.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9382 NVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGtLTPNHVFFNNGVYSVKLTVKDNDGGENS-D 9460
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-ANVSHTYAAPGTYTVTLTVTDDSGASNStA 79
|
....*.
gi 2711936800 9461 TLTVSV 9466
Cdd:pfam18911 80 TDTVTV 85
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5098-5448 |
6.11e-23 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 110.13 E-value: 6.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5098 DRNQDNLSFN---LSGLPV---GA-TLTPTgiygealFqwtpTAADInTYPVTIA----VSD-SGNGNPNEVFVSqqqfn 5165
Cdd:NF038112 1213 DPDGDPLTYAwtqVSGPAVtltGAdTATPS-------F----TAPEV-TADTVLTfqlvVSDgTKTSAPDTVTVL----- 1275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5166 liVRTANTTPVLAAIGNSSVAEGQTLNLVLSASDADGDTLTYSATNL--PPGAVLDPVQGILTWTPNLSQAGTYNNITLT 5243
Cdd:NF038112 1276 --VRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADGDALTYAWTQTsgPAVTLTGATTATATFTAPEVTADTQLTFTLT 1353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5244 ASDGNKSSSQSFAITVNNTNQAPVLAPLPIQTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVL---DPRTGKFTwK 5320
Cdd:NF038112 1354 VSDGTASATDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDGDALTYAWTQTAGPTVTLtgaDTATASFT-A 1432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5321 PNYEQAGEYVLKFAVKDTQNATSQSDVTLRVANVNRSPVISVSPHA-VALGEKLQFQVVGTDPDNNTnLTFSAANLPDEA 5399
Cdd:NF038112 1433 PEVAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESItVDEGSTVTLDASATDPDGDT-LTYAWTQVAGPS 1511
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 5400 V-LDAATGMFSWMPSPGQVGDYAVTYA--VSDGETTvTQTSTVRVAIAPTPP 5448
Cdd:NF038112 1512 VtLTGADSAKLTFTAPEVSADTTLTFSltVTDGSGS-SGPVVVTVTVKNVNR 1562
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
9856-10047 |
8.84e-21 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 102.56 E-value: 8.84e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9856 TVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSD----------ATNATIADAQ- 9924
Cdd:TIGR00845 432 TVYVDYRTEDGTANAGSDYEFTEGTLVFKPGETQKEFRIGIIDDDIFEEDEHFYVRLSNlrvgsedgilEANHVSAVAQl 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9925 -----AVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKpVTVNFATANGTAIAGS-DYTATSGTLSFAPG 9998
Cdd:TIGR00845 512 aspntATVTILDDDHAGIFTFEEDVFHVSESIGIMEVKVLRTSGARGT-VIVPYRTVEGTARGGGkDFEDTCGELEFEND 590
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9999 ETTKTISVQLNGDITDEYDETFFLNLSD------------ATNATITDAQAVGTILDNDAP 10047
Cdd:TIGR00845 591 ETEKTIRVKIVDDEEYEKNDTFFIELGEprwakrgikaalLLNETITDDDQKLTSKEEEER 651
|
|
| Endonuclease_NS |
pfam01223 |
DNA/RNA non-specific endonuclease; |
8085-8322 |
1.75e-20 |
|
DNA/RNA non-specific endonuclease;
Pssm-ID: 460120 Cd Length: 220 Bit Score: 94.42 E-value: 1.75e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8085 DNLLLERPQYTLSFNGTTNTANWASWQLDKYWFYIkgkgypiADQQNKRNFAKDPTLPPG-FAAITDPYGAKvdgiSYDG 8163
Cdd:pfam01223 15 SDVVLFYKYYSLCYDRRTRRALWVAHHLTGASLAG-------SKGRRRPGFKQDPRIPGAyFRTLYTDYTGS----GFDR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8164 GHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAGTDGIKKLKDgsgeakvigsG 8243
Cdd:pfam01223 84 GHLAPAADFKFSAGANAATFNFTNIAPQWAGFNQGNWAYLENYVRDLAARHNNSVYVYTGPLYVPNLLD----------K 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 8244 GDITIPENIWMAmlVIDPDKEPTNNSYTIGFYLENREYSRPSnnaagisstpnEWKLTVKSVNWIENKTGYDLFSNIDK 8322
Cdd:pfam01223 154 NKVAVPTHFWKV--ILSEDGDGGGGLNAPAFVLPNKYILDDG-----------PLRTFQVPVDELERLTGLDFCCGVPD 219
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9007-9300 |
1.85e-20 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 102.04 E-value: 1.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9007 TPNNTFVGTD-------TFTYIILDNNAISNEATVTITVNNI--APTIdNITVESNITEGTTATFSAIATDP-GNDLTYT 9076
Cdd:NF038112 1238 TATPSFTAPEvtadtvlTFQLVVSDGTKTSAPDTVTVLVRNVnrAPVA-VAGAPATVDERSTVTLDGSGTDAdGDALTYA 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9077 WnFGDGSNPVTGKQVNH---TF-----ADNGTYTAILTVTD--TAGASTVETLLLNVNNiAPIPKAGADITTDEGTAITF 9146
Cdd:NF038112 1317 W-TQTSGPAVTLTGATTataTFtapevTADTQLTFTLTVSDgtASATDTVTVTVRNVNR-APVANAGADQTVDERSTVTL 1394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9147 NGSFIDPGiKDTHTITWDFGDGTTAT----GILNPTHTYNQ---DGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDI 9219
Cdd:NF038112 1395 SGSATDPD-GDALTYAWTQTAGPTVTltgaDTATASFTAPEvaaDTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAH 1473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9220 SGDT-NINEGATAKFTATATNPSNDTLTYTW--------NFGDDTDPVVGQTVNHIfAQDGNYTVTLTVTDTSNGITSET 9290
Cdd:NF038112 1474 AGESiTVDEGSTVTLDASATDPDGDTLTYAWtqvagpsvTLTGADSAKLTFTAPEV-SADTTLTFSLTVTDGSGSSGPVV 1552
|
330
....*....|
gi 2711936800 9291 LTVSVNNAAP 9300
Cdd:NF038112 1553 VTVTVKNVNR 1562
|
|
| NUC |
cd00091 |
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA ... |
8065-8323 |
2.89e-20 |
|
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
Pssm-ID: 238043 Cd Length: 241 Bit Score: 94.36 E-value: 2.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8065 LKFGNPKEARysdtdpnpykDNLLLERPQYTLSFNGTTNTANWASWQLDKYWFYIKGKGypiadqqNKRNFAKDPTLPPG 8144
Cdd:cd00091 1 LQYGRPGVLA----------DTEVLSYTHYVLSYNRATRLPLWVAEHIDKEDLGKNVDR-------KYDQFKQDPRIPPL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8145 F-AAITDPYGAKvdgiSYDGGHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAG 8223
Cdd:cd00091 64 FsATNSDYKGSG----SLDRGHLAPAADPVWSQDAQDATFYLTNMAPQVQGFNQGNWAYLEDYLRDLAASEGKDVYVVTG 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8224 TDGIKKL--KDGSGEAKVIGSGGDITIPENIWMAMLVIDPDKEPTNNSYTIGfylenreysrpsNNAAGISSTPNEWKLT 8301
Cdd:cd00091 140 PLFLPDLdgDGGSYLSTQVINNGKVAVPTHFWKVIIDEKAPGNLSVGAFVLP------------NNNPHDTLEFILCVEK 207
|
250 260
....*....|....*....|....
gi 2711936800 8302 VKSVNW--IENKTGYDLFSNIDKT 8323
Cdd:cd00091 208 TFQVPVasVEKATGLSFFCNVPDS 231
|
|
| NUC |
smart00477 |
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA ... |
8093-8321 |
7.35e-20 |
|
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases
Pssm-ID: 214683 Cd Length: 210 Bit Score: 92.04 E-value: 7.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8093 QYTLSFNGTTNTANWASWQLDKYWfyikGKGYPIADQqnkRNFAKDPTLPPGFAAITDPYGakvdGISYDGGHLTPVKHR 8172
Cdd:smart00477 3 QYVLGYNRSTRMPNWVAYHITGEL----LTSGAERKS---DCFKPDTRIPEKFQAKLSDYK----GSGYDRGHLAPAADH 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8173 NRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAGT----DGIKKLKDGSGEAKVIGSgGDITI 8248
Cdd:smart00477 72 KFSSEAMADTFYLSNIVPQYPDFNRGAWAYLEDYLRKLTASERNGVYVVSGPlflpNYDGKGDKLEVKYQVIGS-KNVAI 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 8249 PENIWMamlVIDPDKePTNNSYTIGFYLENreysRPSNNAAgisstpnEWKLTVKSVNWIENKTGYDLFSNID 8321
Cdd:smart00477 151 PTHFFK---VITAEK-ADSYLEVAAFILPN----DPINDES-------PLTNFRVPVDEIERLTGLDFFRNLD 208
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4720-5074 |
1.44e-19 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 99.35 E-value: 1.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4720 QFTVSDGVE-RVTQTATILIANINQAPTLIRPADTIVREGEKVRIQLQATDADIiasiPPLSTSDFQLPTSLLTYNSNLL 4798
Cdd:NF038112 1257 QLVVSDGTKtSAPDTVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADG----DALTYAWTQTSGPAVTLTGATT 1332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4799 PGGSTLDPRTGLFEwtpayfqagEFEIPFTVSDGESVTTQTTKITVLNANAAPIFDNIGTWQVQEGQSVRFRAFAFDPDN 4878
Cdd:NF038112 1333 ATATFTAPEVTADT---------QLTFTLTVSDGTASATDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDG 1403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4879 PGFVPQDRNADGQLTILEGSDpsviytvsdlpvgatfdpiTAMFVWTPGYTSAGTyNVTFTATDDGNGtgiTKATSLTVP 4958
Cdd:NF038112 1404 DALTYAWTQTAGPTVTLTGAD-------------------TATASFTAPEVAADT-ELTFQLTVSADG---QASADVTVT 1460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4959 ISVLNSNRAPEINEFSNITLNRGEVKELVLQATDADGDPLVLQ--------LKAESAGYGIPDFVrfidngdrtatlrlA 5030
Cdd:NF038112 1461 VTVRNVNRAPVAHAGESITVDEGSTVTLDASATDPDGDTLTYAwtqvagpsVTLTGADSAKLTFT--------------A 1526
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2711936800 5031 PGINDGGNYSFTLTATDnGNGSanaiqSDEYTFVVSVNTLNDPP 5074
Cdd:NF038112 1527 PEVSADTTLTFSLTVTD-GSGS-----SGPVVVTVTVKNVNRAP 1564
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4864-5266 |
9.06e-19 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 96.65 E-value: 9.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4864 GQSVRFR----------AFAFDPDNPGF-----------VPQDRNADGQLTILEGSDPSVI-YTVSDLPVGATFDPI--T 4919
Cdd:NF038112 1139 GKTVRFRfrigsdvavgAYGWDLDDLKFtgitntpftslVAEPGVCNRRPVANAGPDQTVLeRTTVTLNGSGSFDPDgdP 1218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4920 AMFVWT----PGYT--SAGTYNVTFTATD--------------DGNGTGITKatslTVPISVLNSNRAPEINEFSNITLN 4979
Cdd:NF038112 1219 LTYAWTqvsgPAVTltGADTATPSFTAPEvtadtvltfqlvvsDGTKTSAPD----TVTVLVRNVNRAPVAVAGAPATVD 1294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4980 RGEVKELVLQATDADGDPLVlQLKAESAGYGipdfVRFIDNGDRTATLrLAPGINDGGNYSFTLTATDNgngsanaIQSD 5059
Cdd:NF038112 1295 ERSTVTLDGSGTDADGDALT-YAWTQTSGPA----VTLTGATTATATF-TAPEVTADTQLTFTLTVSDG-------TASA 1361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5060 EYTFVVSVNTLNDPPILPFIGNKVAVVGETLEFIVKAGDRNQDNLSF---NLSGLPV---GA-TLTPTGIYGEAL----- 5127
Cdd:NF038112 1362 TDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDGDALTYawtQTAGPTVtltGAdTATASFTAPEVAadtel 1441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5128 -FQWTPTAADINTYPVTIAVSdsgngnpnevfvsqqqfnliVRTANTTPVLAAIGNSSVAEGQTLNLVLSASDADGDTLT 5206
Cdd:NF038112 1442 tFQLTVSADGQASADVTVTVT--------------------VRNVNRAPVAHAGESITVDEGSTVTLDASATDPDGDTLT 1501
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 5207 YSATNL--PPGAVLDPVQGILTWTPNLSQAGTYNNITLTASDGNKSSSQSF-AITVNNTNQAP 5266
Cdd:NF038112 1502 YAWTQVagPSVTLTGADSAKLTFTAPEVSADTTLTFSLTVTDGSGSSGPVVvTVTVKNVNRAP 1564
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
8956-9214 |
1.50e-18 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 95.88 E-value: 1.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8956 PIANDDIATT-DQAKPVAINVLANDSTQGTVQLGAAPTNGSII-INNDRTLTYT---PNNTFVGTDTFTYIILDNNAiSN 9030
Cdd:NF038112 1283 PVAVAGAPATvDERSTVTLDGSGTDADGDALTYAWTQTSGPAVtLTGATTATATftaPEVTADTQLTFTLTVSDGTA-SA 1361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9031 EATVTITVNNI--APTIDNITVESnITEGTTATFSAIATDP-GNDLTYTWNfgdgsnPVTGKQVNHTFADNGTYTAI--- 9104
Cdd:NF038112 1362 TDTVTVTVRNVnrAPVANAGADQT-VDERSTVTLSGSATDPdGDALTYAWT------QTAGPTVTLTGADTATASFTape 1434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9105 ----------LTVTDTAGASTVETLLLNVNNI--APIPKAGADITTDEGTAITFNGSFIDPGiKDTHTITWDFGDGT--T 9170
Cdd:NF038112 1435 vaadteltfqLTVSADGQASADVTVTVTVRNVnrAPVAHAGESITVDEGSTVTLDASATDPD-GDTLTYAWTQVAGPsvT 1513
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2711936800 9171 ATGILNPTHTY-----NQDGVYTATLTVTDNDGATNSNSLTVTVNNIDP 9214
Cdd:NF038112 1514 LTGADSAKLTFtapevSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNR 1562
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4961-5358 |
5.38e-18 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 93.95 E-value: 5.38e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4961 VLNSNRAPEINEFSNITLNrGEvkelvlQATDADGDPLVLQLKAESagyGIPdfVRFIDNGDRTATLrLAPGINDGGNYS 5040
Cdd:NF038112 1189 VANAGPDQTVLERTTVTLN-GS------GSFDPDGDPLTYAWTQVS---GPA--VTLTGADTATPSF-TAPEVTADTVLT 1255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5041 FTLTATDNGNGSANAiqsdeyTFVVSVNTLNDPPILPFIGNKVAVVGETLEFIVKAGDRNQDNLSF---NLSGLPVgaTL 5117
Cdd:NF038112 1256 FQLVVSDGTKTSAPD------TVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADGDALTYawtQTSGPAV--TL 1327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5118 TPTGIyGEALFQWTPTAADiNTYPVTIAVSDSGNGNPNEVFVSqqqfnliVRTANTTPVLAAIGNSSVAEGQTLNLVLSA 5197
Cdd:NF038112 1328 TGATT-ATATFTAPEVTAD-TQLTFTLTVSDGTASATDTVTVT-------VRNVNRAPVANAGADQTVDERSTVTLSGSA 1398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5198 SDADGDTLTYSATNLPPGAVldPVQGILTWTPNLS----QAGTYNNITLTAS-DGNKSSSQSFAITVNNTNQAPVLAPLP 5272
Cdd:NF038112 1399 TDPDGDALTYAWTQTAGPTV--TLTGADTATASFTapevAADTELTFQLTVSaDGQASADVTVTVTVRNVNRAPVAHAGE 1476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5273 IQTAQENNLIQFTLAAADIDNDSLIYSAV-----SALPTGAvlDPRTGKFTwKPNYEQAGEYVLKFAVKDTQNATSQSDV 5347
Cdd:NF038112 1477 SITVDEGSTVTLDASATDPDGDTLTYAWTqvagpSVTLTGA--DSAKLTFT-APEVSADTTLTFSLTVTDGSGSSGPVVV 1553
|
410
....*....|.
gi 2711936800 5348 TLRVANVNRSP 5358
Cdd:NF038112 1554 TVTVKNVNRAP 1564
|
|
| Calx-beta |
pfam03160 |
Calx-beta domain; |
9944-10025 |
1.99e-17 |
|
Calx-beta domain;
Pssm-ID: 397326 [Multi-domain] Cd Length: 91 Bit Score: 81.14 E-value: 1.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9944 TITESDngtTTAIFTVSLDAAS-GKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFL 10022
Cdd:pfam03160 12 QVSEND---GVAEVCVVRMSGTlRRTVVVPYRTEDGTATAGDDYEPVEGELVFGPGETEKCINVTIIDDDVYEGDENFFV 88
|
...
gi 2711936800 10023 NLS 10025
Cdd:pfam03160 89 LLS 91
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
9966-10137 |
4.00e-17 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 90.62 E-value: 4.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9966 GKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSD----------ATNATITDA 10035
Cdd:TIGR00845 430 TNTVYVDYRTEDGTANAGSDYEFTEGTLVFKPGETQKEFRIGIIDDDIFEEDEHFYVRLSNlrvgsedgilEANHVSAVA 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10036 Q------AVGTILDNDAPPVLTINDKTITEGDNGTTyMSFTVSLSVASAKPITVDYTTANGTAIAGS-DYKATSGTLSFA 10108
Cdd:TIGR00845 510 QlaspntATVTILDDDHAGIFTFEEDVFHVSESIGI-MEVKVLRTSGARGTVIVPYRTVEGTARGGGkDFEDTCGELEFE 588
|
170 180
....*....|....*....|....*....
gi 2711936800 10109 PGETSQTIIVEVIGDHNRGADETFAINLS 10137
Cdd:TIGR00845 589 NDETEKTIRVKIVDDEEYEKNDTFFIELG 617
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4525-4969 |
1.43e-14 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 82.78 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4525 VEFTpGIYALPYP---------NQAPIITSNPVLTAYTGQAYSYQVTAN-DPDGAVLGYLlYDAPSGMTIDQnTGLITWS 4594
Cdd:NF038112 1164 LKFT-GITNTPFTslvaepgvcNRRPVANAGPDQTVLERTTVTLNGSGSfDPDGDPLTYA-WTQVSGPAVTL-TGADTAT 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4595 PTQQSP-VSADVT----LQVYDLRGAHTTQSFSLNVVGGNHKPVFNTpvvsggiivsSSNGTVsgssatpitikgAEGKP 4669
Cdd:NF038112 1241 PSFTAPeVTADTVltfqLVVSDGTKTSAPDTVTVLVRNVNRAPVAVA----------GAPATV------------DERST 1298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4670 LQIQITATDADRNKLTY-WADNL-PNGAIFDSSSGILTWNPNYNAAGTYENVQFTVSDGVERVTQTATILIANINQAPTL 4747
Cdd:NF038112 1299 VTLDGSGTDADGDALTYaWTQTSgPAVTLTGATTATATFTAPEVTADTQLTFTLTVSDGTASATDTVTVTVRNVNRAPVA 1378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4748 IRPADTIVREGEKVRIQLQATDADIIAsippLSTSDFQLPTSLLTynsnlLPGGSTLDPRTGlfewTPAYFQAGEFEIPF 4827
Cdd:NF038112 1379 NAGADQTVDERSTVTLSGSATDPDGDA----LTYAWTQTAGPTVT-----LTGADTATASFT----APEVAADTELTFQL 1445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4828 TVS-DGESVTTQTTKITVLNANAAPIFDNIGTWQVQEGQSVRFRAFAFDPDNpgfvpqdrnadGQLTI----LEGsdPSV 4902
Cdd:NF038112 1446 TVSaDGQASADVTVTVTVRNVNRAPVAHAGESITVDEGSTVTLDASATDPDG-----------DTLTYawtqVAG--PSV 1512
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 4903 IYTVSDLPVgATFdpitamfvwTPGYTSAGTyNVTFTAT-DDGNGTgitkATSLTVPISVLNSNRAPE 4969
Cdd:NF038112 1513 TLTGADSAK-LTF---------TAPEVSADT-TLTFSLTvTDGSGS----SGPVVVTVTVKNVNRAPD 1565
|
|
| Calx-beta |
pfam03160 |
Calx-beta domain; |
10056-10137 |
6.28e-13 |
|
Calx-beta domain;
Pssm-ID: 397326 [Multi-domain] Cd Length: 91 Bit Score: 68.43 E-value: 6.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10056 TITEGDngtTYMSFTVSLSVASA-KPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAI 10134
Cdd:pfam03160 12 QVSEND---GVAEVCVVRMSGTLrRTVVVPYRTEDGTATAGDDYEPVEGELVFGPGETEKCINVTIIDDDVYEGDENFFV 88
|
...
gi 2711936800 10135 NLS 10137
Cdd:pfam03160 89 LLS 91
|
|
| Calx_beta |
smart00237 |
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin ... |
9944-10025 |
3.03e-12 |
|
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
Pssm-ID: 197594 [Multi-domain] Cd Length: 90 Bit Score: 66.12 E-value: 3.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9944 TITESDngtTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLN 10023
Cdd:smart00237 12 TVSESD---GEVEVCVVRTGGARGPVVVPYSTEDGTATAGSDYEPVPGELTFPPGETEKEIRIKIIDDDIYEKDETFYVR 88
|
..
gi 2711936800 10024 LS 10025
Cdd:smart00237 89 LS 90
|
|
| YncE |
COG3391 |
DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
6782-6980 |
3.53e-12 |
|
DNA-binding beta-propeller fold protein YncE [General function prediction only];
Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 70.49 E-value: 3.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6782 YFGTEPSSYQIVKYDSNPIHLSANNGYVLAAQPFSDRVAVLQgtnpeavveatSSNDLVVARIPVGTDdvvdrPRDIAFT 6861
Cdd:COG3391 55 ALLAGLGLGAAAVADADGADAGADGRRLYVANSGSGRVSVID-----------LATGKVVATIPVGGG-----PRGLAVD 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6862 RDGSRAYVTLENSGRIALVDPLFLQQIDTkpeteeidtikLPTAASPRAIVVDNQDQYAYIADGRLG----IIYVLDINP 6937
Cdd:COG3391 119 PDGGRLYVADSGNGRVSVIDTATGKVVAT-----------IPVGAGPHGIAVDPDGKRLYVANSGSNtvsvIVSVIDTAT 187
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2711936800 6938 NsktyhQVIQNIQINGAPLGLRelvVSTDGRKLFATAPASGTA 6980
Cdd:COG3391 188 G-----KVVATIPVGGGPVGVA---VSPDGRRLYVANRGSNTS 222
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9661-9730 |
2.86e-11 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 63.24 E-value: 2.86e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9661 DTNVDEGTPAYFSATATDPGNDTlTYTWNFGDGTDAVvGQNVNHTFADNGIYTVTLTVSDEDG-ASTTKTL 9730
Cdd:smart00089 8 PTVGVAGESVTFTATSSDDGSIV-SYTWDFGDGTSST-GPTVTHTYTKPGTYTVTLTVTNAVGsASATVTV 76
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9196-9750 |
3.27e-11 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 71.35 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9196 NDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTV 9275
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9276 TLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADE 9355
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9356 GTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPN 9435
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9436 HVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAV 9515
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9516 IGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFG 9595
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9596 DGTTLeytphaptpphspLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSAT 9675
Cdd:COG4625 401 GGGGA-------------GGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGG 467
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 9676 ATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMY 9750
Cdd:COG4625 468 GSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTY 542
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9655-9734 |
4.17e-11 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 62.90 E-value: 4.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9655 ITDISGDTNVDEGTPAYFSATATDPGNDTlTYTWNFGDG-TDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTK 9733
Cdd:cd00146 2 TASVSAPPVAELGASVTFSASDSSGGSIV-SYKWDFGDGeVSSSGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVV 80
|
.
gi 2711936800 9734 V 9734
Cdd:cd00146 81 V 81
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9739-9820 |
6.52e-11 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 62.13 E-value: 6.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9739 PTVAAGDNQIMYIGETVAFwgQFTDPGILDTHTVVWDFGDSNTVAGTLR-PTHIYNSNGTYSVTLTVTDDDGGVTNNTLT 9817
Cdd:cd00146 1 PTASVSAPPVAELGASVTF--SASDSSGGSIVSYKWDFGDGEVSSSGEPtVTHTYTKPGTYTVTLTVTNAVGSSSTKTTT 78
|
...
gi 2711936800 9818 VTV 9820
Cdd:cd00146 79 VVV 81
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9052-9115 |
1.08e-10 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 61.70 E-value: 1.08e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 9052 SNITEGTTATFSAIATDPGNDLTYTWNFGDGSnPVTGKQVNHTFADNGTYTAILTVTDTAGAST 9115
Cdd:smart00089 9 TVGVAGESVTFTATSSDDGSIVSYTWDFGDGT-SSTGPTVTHTYTKPGTYTVTLTVTNAVGSAS 71
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
8956-9026 |
1.17e-10 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 61.97 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8956 PIANDDIATTDqakpvAINVLANDS---------TQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNN 9026
Cdd:pfam17963 15 PVAVDDSVTVT-----EDTVLANDSdpdgdpltiTSLTVTIVTAPANGTVTVNADGTLTYTPNAGFSGTDSFTYTVSDGS 89
|
|
| Calx_beta |
smart00237 |
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin ... |
10056-10137 |
2.91e-10 |
|
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
Pssm-ID: 197594 [Multi-domain] Cd Length: 90 Bit Score: 60.73 E-value: 2.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10056 TITEGDngtTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAIN 10135
Cdd:smart00237 12 TVSESD---GEVEVCVVRTGGARGPVVVPYSTEDGTATAGSDYEPVPGELTFPPGETEKEIRIKIIDDDIYEKDETFYVR 88
|
..
gi 2711936800 10136 LS 10137
Cdd:smart00237 89 LS 90
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
8974-9050 |
4.62e-10 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 60.34 E-value: 4.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8974 NVLANDS------TQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNI--APTI 9045
Cdd:NF012211 14 QLLANASdvdgddLTVSNVSYSGPTNGTVTDNGDGTYTYTPNENFNGDDSFTYTVSDGTGATATATVFVTVNPVndAPVA 93
|
....*
gi 2711936800 9046 DNITV 9050
Cdd:NF012211 94 GNDAF 98
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5263-5451 |
6.01e-10 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 67.37 E-value: 6.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5263 NQAPVLAPLPIQTAQENNLIQFT-LAAADIDNDSLIYS--AVSALP---TGAvlDPRTGKFTwKPNYEQAGEYVLKFAVK 5336
Cdd:NF038112 1185 NRRPVANAGPDQTVLERTTVTLNgSGSFDPDGDPLTYAwtQVSGPAvtlTGA--DTATPSFT-APEVTADTVLTFQLVVS 1261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5337 DTQNATSQSDVTLRVANVNRSPVISVS-PHAVALGEKLQFQVVGTDPDNNTnLTFSAANLPDEAV-LDAATGMFSWMPSP 5414
Cdd:NF038112 1262 DGTKTSAPDTVTVLVRNVNRAPVAVAGaPATVDERSTVTLDGSGTDADGDA-LTYAWTQTSGPAVtLTGATTATATFTAP 1340
|
170 180 190
....*....|....*....|....*....|....*....
gi 2711936800 5415 GQVGDYAVTY--AVSDGETTVTQTSTVRVAIAPTPPIVN 5451
Cdd:NF038112 1341 EVTADTQLTFtlTVSDGTASATDTVTVTVRNVNRAPVAN 1379
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
3080-3188 |
4.37e-08 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 54.98 E-value: 4.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3080 ADLQVDEITIPSNAKSGESVQISWKVTNYGdNPASGQWSDAVYLSADAVWDIndrpigrvsYSGNLASGAEYTSTLTaiL 3159
Cdd:pfam07705 2 PDLIVQSISPPSEAYVGEENTITVTVKNQG-TAAAGAFNVALYVDGTSVGTI---------TVPGLAAGESTTVSFS--W 69
|
90 100
....*....|....*....|....*....
gi 2711936800 3160 PPATPGQYRIIVRPDIFNQVYEaENEANN 3188
Cdd:pfam07705 70 TPPTEGSYTLTVVVDPDNTVAE-SNETNN 97
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9636-10118 |
7.96e-08 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 60.44 E-value: 7.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9636 DGGVT-IDTLTVTVNNvGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYtwNFGDgtdAVVGQNVNHTF---ADNGI 9711
Cdd:NF038112 1081 DGGQTwVDIGDLDADP-GYTGTLYEGGGNPLEGRPAFVGTSAGFPAFISATL--NLGT---AFAGKTVRFRFrigSDVAV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9712 YTVTLTVSDEDGASTTKTLSTK------VNNVAPTVAAGDNQIMYIGETVAFWGQ-FTDP-GilDTHTVVWD--FGDSNT 9781
Cdd:NF038112 1155 GAYGWDLDDLKFTGITNTPFTSlvaepgVCNRRPVANAGPDQTVLERTTVTLNGSgSFDPdG--DPLTYAWTqvSGPAVT 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9782 VAG--TLRPTHI-----YNSNGTYsvTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASL 9854
Cdd:NF038112 1233 LTGadTATPSFTapevtADTVLTF--QLVVSDGTKTSAPDTVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADG 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9855 RTVTANFATADGTAITGSDylATTGTITFNPGKTTQTITVaingdrideydeTFFLNLSDATnATIADAQAVaTILDNDA 9934
Cdd:NF038112 1311 DALTYAWTQTSGPAVTLTG--ATTATATFTAPEVTADTQL------------TFTLTVSDGT-ASATDTVTV-TVRNVNR 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9935 PPTLT-ITDKTITESDNGTTTAiftvSLDAASGKPVTVNFATANGTAIAGSDytATSGTLSF-APgettktisvqlngDI 10012
Cdd:NF038112 1375 APVANaGADQTVDERSTVTLSG----SATDPDGDALTYAWTQTAGPTVTLTG--ADTATASFtAP-------------EV 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10013 TDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTtymsFTVSLSVASAKPITVDYTTANGTA 10092
Cdd:NF038112 1436 AADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESITVDEGSTVT----LDASATDPDGDTLTYAWTQVAGPS 1511
|
490 500
....*....|....*....|....*..
gi 2711936800 10093 IAGSDykATSGTLSF-APGETSQTIIV 10118
Cdd:NF038112 1512 VTLTG--ADSAKLTFtAPEVSADTTLT 1536
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5901-6166 |
8.87e-08 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 60.44 E-value: 8.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5901 GEAISYSTTpQVSPVLADLGSAAQFTLKTTSGSLGESNRFTFSLRDSELRSTATGTVLLAVS-------VNAALNPAIPL 5973
Cdd:NF038112 1310 GDALTYAWT-QTSGPAVTLTGATTATATFTAPEVTADTQLTFTLTVSDGTASATDTVTVTVRnvnrapvANAGADQTVDE 1388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5974 ISGLTPIVSQSDADSAFALFAVSSAGLNLLQLGGAGSAYSLqlSVAGDVnrdglvdGVDSGLLRGAIAfgnydvtydfNR 6053
Cdd:NF038112 1389 RSTVTLSGSATDPDGDALTYAWTQTAGPTVTLTGADTATAS--FTAPEV-------AADTELTFQLTV----------SA 1449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6054 DGVLNAAD-VQILGSNygfaANRAPVVTATSVLThTDLETSIALDKLATDAEGDRIFYRIINPVNGAVTFT-PDGHSARF 6131
Cdd:NF038112 1450 DGQASADVtVTVTVRN----VNRAPVAHAGESIT-VDEGSTVTLDASATDPDGDTLTYAWTQVAGPSVTLTgADSAKLTF 1524
|
250 260 270
....*....|....*....|....*....|....*.
gi 2711936800 6132 TPNAGYSGTA-SFEVVADDGYSSSAPALVTVNVSNA 6166
Cdd:NF038112 1525 TAPEVSADTTlTFSLTVTDGSGSSGPVVVTVTVKNV 1560
|
|
| Dockerin_II |
cd14254 |
Type II dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein ... |
6020-6070 |
9.67e-08 |
|
Type II dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.
Pssm-ID: 271213 Cd Length: 54 Bit Score: 52.21 E-value: 9.67e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 6020 GDVNRDGLVDGVDSGLLR---GAIAFGNYDVTYDFNRDGVLNAADVQILGSNYG 6070
Cdd:cd14254 1 GDVNGDGVVDIADLALVSqhfGKTSDAGYVPAADLNGDGVIDAADLALLAQNFG 54
|
|
| YvrE |
COG3386 |
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ... |
4078-4251 |
1.02e-07 |
|
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 442613 [Multi-domain] Cd Length: 266 Bit Score: 57.59 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4078 PLAITVLKDGSVLAsgGANRGSLYRF-LQTGA------PLNSGQNSPipfvtleypiFDMTVDGNGTLWATT-----GGG 4145
Cdd:COG3386 51 PNGLAFDPDGRLLV--ADHGRGLVRFdPADGEvtvladEYGKPLNRP----------NDGVVDPDGRLYFTDmgeylPTG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4146 PLLQLDTqTGKIVKQYGD-SITQALAIQPGTGLIYV--SSGKGIEIFnPINETFThYSDLRV-----------DSLAFDA 4211
Cdd:COG3386 119 ALYRVDP-DGSLRVLADGlTFPNGIAFSPDGRTLYVadTGAGRIYRF-DLDADGT-LGNRRVfadlpdgpggpDGLAVDA 195
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2711936800 4212 DGKLWATTWPERGdIVRFNENGKPERMLEFDSP-VDSIAFG 4251
Cdd:COG3386 196 DGNLWVALWGGGG-VVRFDPDGELLGRIELPERrPTNVAFG 235
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
5096-5881 |
1.11e-07 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 59.77 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5096 AGDRNQDNLSFNLSGLPVGATLTPTGIYGEALFQWTPTAADINTYPVTIAVSDSGNGNPNEVFVSQQQFNLIVRTANTTP 5175
Cdd:COG3209 19 AATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5176 VLAAIGNSSVAEGQTLNLVLSASDADGDTLTYSATNLPPGAVLDPVQGILTWTPNLSQAGTY------NNITLTASDGNK 5249
Cdd:COG3209 99 AGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGlagggaSAYGLTLGGAAA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5250 SSSQSFAITVNNTNQAPVLAPLPIQTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVLDPRTGKFTWKPNYEQAGEY 5329
Cdd:COG3209 179 GPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5330 VLKFAVKDTQNATSQSDVTLRVANVNRSPVISVSPHAVALGEKLQFQVVGTDPDNNTNLTFSAANLPDEAVLDAATGMFS 5409
Cdd:COG3209 259 LGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5410 WMPSPGQVGDYAVTYAVSDGETTVTQTSTVRVAIAPTPPIVNFDLTPSFPAVPGQKVIVQTLASSLAAIANLSATIDGHT 5489
Cdd:COG3209 339 GTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5490 VLVDTQGRIEIIPTTPGRLVVDVTATDADGRVGHNSTVVKVRDPQDLAAPIVAFAPGLDGAKLTNVTNIIGSVSDVNLDN 5569
Cdd:COG3209 419 PATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGATTLGT 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5570 WVLEIADFGEDVYRTLASGNGAVSDITLAQFDPGKLENGFYQLRLRATDISDRISSTQVIVEVNTATKPSAYTRTQTDLS 5649
Cdd:COG3209 499 DTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGA 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5650 ITFSSTLPDSLPHSLNLIRTYSSLNSDEVGSFGNGWQWATLDTNIQTNVPLTGRESLGVYEPFRVGTRLYLTTPSGERVG 5729
Cdd:COG3209 579 STTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTR 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5730 FTFAPQKHIIPGLTYYTPAWVADSGVNYKLESADATLTLAGNRLYDLKTGLAYNPGRGSYSDAEYTLTAVDGTVYHLSSA 5809
Cdd:COG3209 659 ATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTG 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5810 GGVTEEIAANGTRLVY-----------------SDSGITSSAGETVRFVKDSAGRLTQITAPDGSLVVYGYDTQGNLVSA 5872
Cdd:COG3209 739 GTTGTLTTTSTTTTTTagaltytydalgrltseTTPGGVTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSV 818
|
....*....
gi 2711936800 5873 RNLASGESS 5881
Cdd:COG3209 819 ITVGSGGGT 827
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
4540-4625 |
1.47e-07 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 53.24 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4540 APIITSNPVLTAYTGQAYSYQVTAN---DPDGAVLGYLLYDA-----PSGMTIDQNTGLITWSPTQQSPVSADVTLQVYD 4611
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSASggsDPYGGSTVTYSTTAtggalPSGLTLNSSTGTISGTPTSVQPGTYTFTVTATD 80
|
90
....*....|....
gi 2711936800 4612 LRGAHTTQSFSLNV 4625
Cdd:pfam05345 81 SSGLSSSTTFTLTV 94
|
|
| CADG |
smart00736 |
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan ... |
5179-5265 |
1.56e-07 |
|
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.
Pssm-ID: 214795 [Multi-domain] Cd Length: 97 Bit Score: 53.11 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5179 AIGNSSVAEGQTLNLVLSAS---DADGDTLTYSAT-----NLPPGAVLDPVQGILTWTPNLSQAGTYnNITLTASD-GNK 5249
Cdd:smart00736 3 AIGDQTATEGESFSYTIPSStftDADGDTLTYSATlsdgsALPSWLSFDSDTGTLSGTPTNSDVGSL-SLKVTATDsSGA 81
|
90
....*....|....*.
gi 2711936800 5250 SSSQSFAITVNNTNQA 5265
Cdd:smart00736 82 SASDTFTITVVNTNDA 97
|
|
| PTZ00259 |
PTZ00259 |
endonuclease G; Provisional |
8082-8322 |
2.82e-07 |
|
endonuclease G; Provisional
Pssm-ID: 240335 [Multi-domain] Cd Length: 434 Bit Score: 57.56 E-value: 2.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8082 PYKDNLLLeRPQYTLSFNGTTNTANWASWQLDkYWFYIKGKGYPIADQqNKRNFAKDPTLPPGFAAITDPYgakvDGISY 8161
Cdd:PTZ00259 106 PSTENLRL-YEGYVSSLNYERRIPNWVAEYIP-YRGISVEAGEKKANR-ADCVFYADPTVPEAFRAENKDY----TGSGY 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8162 DGGHLTPVK-HRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAG----------TDGIKKL 8230
Cdd:PTZ00259 179 SRGHLAAAGfHKASQTAMDDTFLLSANIVPQDLTNNAGDWLRLENLTRKLAREYEVGVYVVSGplfvprymreKLRKWRL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8231 KDGSGEAKVIGSGGDitiPENIWMAMLVIDP--------------DKEPTNNSYTIG-FYLENREysrpsnnaagISSTP 8295
Cdd:PTZ00259 259 AEPSEIHKPDSPADK---TPKKVVTYEVIGDnnvavpthlfkvilAEKNDGPPHEVAaFLMPNEP----------ISKEK 325
|
250 260
....*....|....*....|....*..
gi 2711936800 8296 NEWKLTVkSVNWIENKTGYDLFSNIDK 8322
Cdd:PTZ00259 326 PLTAYQV-PLEEIEKLTGLQFFPKLDA 351
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
5174-5260 |
4.89e-07 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 51.70 E-value: 4.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5174 TPVLAAIGNSSVAEGQTLNLVLSA----SDADGDTLTYSATN----LPPGAVLDPVQGILTWTPNLSQAGTYnNITLTAS 5245
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSAsggsDPYGGSTVTYSTTAtggaLPSGLTLNSSTGTISGTPTSVQPGTY-TFTVTAT 79
|
90
....*....|....*.
gi 2711936800 5246 DGNK-SSSQSFAITVN 5260
Cdd:pfam05345 80 DSSGlSSSTTFTLTVT 95
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
6073-6224 |
9.38e-07 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 56.97 E-value: 9.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6073 ANRAPVVTATSVLThTDLETSIALDKLATDAEGDRIFYRIINPVNGAVTFT-PDGHSARFT-PNAGYSGTASFEVVADDG 6150
Cdd:NF038112 1372 VNRAPVANAGADQT-VDERSTVTLSGSATDPDGDALTYAWTQTAGPTVTLTgADTATASFTaPEVAADTELTFQLTVSAD 1450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6151 YSSSAPALVTVNVSNA--ALVnldfARRGLRLDAGESAELVVVGDFADQENVILPYSYLQLA-------SDNTAVAAVSA 6221
Cdd:NF038112 1451 GQASADVTVTVTVRNVnrAPV----AHAGESITVDEGSTVTLDASATDPDGDTLTYAWTQVAgpsvtltGADSAKLTFTA 1526
|
...
gi 2711936800 6222 GKV 6224
Cdd:NF038112 1527 PEV 1529
|
|
| PQQ_ABC_repeats |
TIGR03866 |
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family ... |
6840-7015 |
1.28e-06 |
|
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Pssm-ID: 274824 [Multi-domain] Cd Length: 310 Bit Score: 54.66 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6840 VVARIPVGtddvvDRPRDIAFTRDGSRAYVTLENSGRIALVDPLFLQQIDTkpeteeidtikLPTAASPRAIVVDNQDQY 6919
Cdd:TIGR03866 33 VTRTFPVG-----QRPRGITFSKDGKLLYVCASDSDTIQVIDPATGEVLHT-----------LPSGPDPEQFALHPNGKI 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6920 AYIADGRLGIIYVLDINPNsktyhQVIQNIQINGAPLGlreLVVSTDGRKLFATAPASGTA-----KSKIVVVNIDPEDK 6994
Cdd:TIGR03866 97 LYIANEDDALVTVIDIETR-----KVLAQIDVGVEPEG---MAVSPDGKIVVNTSETTNMAhwidtATYEIVDNTLVDAR 168
|
170 180
....*....|....*....|....*....
gi 2711936800 6995 P---EYYQNNLRRWHE-----QVAAIDVE 7015
Cdd:TIGR03866 169 PrfaEFTADGKELWVSseiggTVTVIDVA 197
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9760-10075 |
2.56e-06 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 54.29 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9760 QFTDPGILDTHTVVWDFGDSNTVAGTlRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDG 9839
Cdd:COG3291 15 QFTDTSSGNATSYEWDFGDGTTSTEA-NPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTVTTL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9840 NAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFflnLSDATNAT 9919
Cdd:COG3291 94 ANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTT---DVTSDGTT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9920 IADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGE 9999
Cdd:COG3291 171 SASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNT 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 10000 TTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSV 10075
Cdd:COG3291 251 VTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTTGS 326
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
6072-6150 |
1.11e-05 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 47.72 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6072 AANRAPVVTATSVLTHTDleTSIALDklaTDAEGDRI------FYRIINPVNGAVTFTPDGhSARFTPNAGYSGTASFEV 6145
Cdd:pfam17963 10 PVNDAPVAVDDSVTVTED--TVLAND---SDPDGDPLtitsltVTIVTAPANGTVTVNADG-TLTYTPNAGFSGTDSFTY 83
|
....*
gi 2711936800 6146 VADDG 6150
Cdd:pfam17963 84 TVSDG 88
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
1639-1756 |
2.12e-05 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 47.27 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1639 APDLIVKSVFTPPTASIGQTTDISWTVANTGSLSATqAWTDRVYLikentNGTF-DGVTLPssaifldilrhetGLAAND 1717
Cdd:pfam07705 1 LPDLIVQSISPPSEAYVGEENTITVTVKNQGTAAAG-AFNVALYV-----DGTSvGTITVP-------------GLAAGE 61
|
90 100 110
....*....|....*....|....*....|....*....
gi 2711936800 1718 EYTtpvRKVLLPEVEDGDYRIVVITDFDNSILEGKDENN 1756
Cdd:pfam07705 62 STT---VSFSWTPPTEGSYTLTVVVDPDNTVAESNETNN 97
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9953-10476 |
4.64e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 50.93 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9953 TTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATI 10032
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10033 TDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGET 10112
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10113 SQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINGSGDFDGNPLDLYDDTLIY 10192
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10193 AAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLVPPQIVEPQTIIVPAYASVKQQ 10272
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10273 ELErrIPTGATTLTFNMQQNPMNNAADWAKKFPPSGTASNPTVVRVTGGGLNIPANVSLNNYVIIVEQGDINFNGSGHNL 10352
Cdd:COG4625 321 GGG--GGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10353 NNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITFNGATSTVDESSNLQVISQGD----L 10428
Cdd:COG4625 399 GGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAgtltL 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 10429 TYNGSANTRGTFLAAKNFTYNGNSTL--------FGSIDVKGNIIFNGQATVTAIG 10476
Cdd:COG4625 479 TGNNTYTGTTTVNGGGNYTQSAGSTLavevdaanSDRLVVTGTATLNGGTVVVLAG 534
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
5800-5896 |
5.53e-05 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 51.16 E-value: 5.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5800 DGTVYH--LSSAGGVTEEIAANGTRLVYS---DSG----ITSSAGETVRFVKDSAGRLTQITAPDGSLVVYGYDTQGNLV 5870
Cdd:NF041261 425 DGSVTRsgYDAAGRLTAQTDAAGRRTEYSlnvVSGditdITTPDGRETKFYYNDGNQLTSVTSPDGLESRREYDEPGRLV 504
|
90 100
....*....|....*....|....*.
gi 2711936800 5871 SARNlASGESSRYGYSSSVLTLATGT 5896
Cdd:NF041261 505 SETS-RSGETTRYRYDDPHSELPATT 529
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
4969-5077 |
8.58e-05 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 45.31 E-value: 8.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4969 EINEFSNITLNRgevKELVLQATDADGDPLVlqlkAESAGYGIPDFVRFIDNGDRTATLRLAPGINdgGNYSFTLTATDN 5048
Cdd:NF012211 1 STDEDGSITITQ---EQLLANASDVDGDDLT----VSNVSYSGPTNGTVTDNGDGTYTYTPNENFN--GDDSFTYTVSDG 71
|
90 100
....*....|....*....|....*....
gi 2711936800 5049 GNGSANAiqsdeyTFVVSVNTLNDPPILP 5077
Cdd:NF012211 72 TGATATA------TVFVTVNPVNDAPVAG 94
|
|
| SGL |
pfam08450 |
SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in ... |
4080-4251 |
1.28e-04 |
|
SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
Pssm-ID: 462480 [Multi-domain] Cd Length: 246 Bit Score: 48.03 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4080 AITVLKDGSVLAsggANRGSLYRF-LQTGA--PLNSGQNSPIPFVTLEypifDMTVDGNGTLWATT---------GGGPL 4147
Cdd:pfam08450 45 AIAPRDDGGLIV---ALKDGVALLdLATGEltPLADPEDDDWPLNRFN----DGKVDPDGRFWFGTmgddeapggDPGAL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4148 LQLDTQtGKIVKQYGD-SITQALAIQP-GTGLIYVSSGKGI-----------EIFNPinETFTHY--SDLRVDSLAFDAD 4212
Cdd:pfam08450 118 YRLDPD-GKLTRVLDGlTISNGLAWSPdGRTLYFADSPARKiwaydydldggLISNR--RVFADFkpGLGRPDGMAVDAE 194
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2711936800 4213 GKLWATTWpERGDIVRFNENGKPERMLEFdsPVD---SIAFG 4251
Cdd:pfam08450 195 GNVWVARW-GGGKVVRFDPDGKLLREIEL--PAKrptSCAFG 233
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
8973-9211 |
1.46e-04 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 48.97 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8973 INVLANDSTQgTVQLGAapTNGSII------INNDrTL---------TYTPNNTFVGTDTFTYIILDNNAIsneATVTIT 9037
Cdd:PRK08026 135 VNVLAKDGSM-KIQVGA--NDGETItidlkkIDSD-TLgldgfnvngKGTVANTAATVSDLTAAGATLDTT---GLYDVK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9038 VNNIAPTIDNITveSNITEGTTATFSAIATdpgndlTYTWNFGDGSNPVTGKQVNHTfADNGTYTAiltVTDTAGASTVE 9117
Cdd:PRK08026 208 TKNAALTTADAL--AKLGDGDKVTATATGG------DYTYNAKSGKYQAADLAATLT-PDVGGTAG---ASYTIKDGTYE 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9118 tllLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIK-DTHTITWDFGDGTTATGILNPTHTYN-QDGVYTATLTVTD 9195
Cdd:PRK08026 276 ---VNVDSDGKITLGGSALYIDATGNLTTNNAGAATKATlDALKKTASEGAATAKAALAAAGVTVAdGVTAKTVKMSYTD 352
|
250
....*....|....*.
gi 2711936800 9196 NDGATNSNSLTVTVNN 9211
Cdd:PRK08026 353 KNGKVIDGGYAVKTGD 368
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
4744-4844 |
5.54e-04 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 42.84 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4744 APTLIRPADTIVREGEKVRIQLQATDADIIASIPPLSTSdfqlptslLTYNSNLLPGGSTLDPRTGLFEWTPAYFQAGEF 4823
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSASGGSDPYGGSTVTYS--------TTATGGALPSGLTLNSSTGTISGTPTSVQPGTY 72
|
90 100
....*....|....*....|..
gi 2711936800 4824 EIPFTVSDGESVT-TQTTKITV 4844
Cdd:pfam05345 73 TFTVTATDSSGLSsSTTFTLTV 94
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
5843-5874 |
5.54e-04 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 41.05 E-value: 5.54e-04
10 20 30
....*....|....*....|....*....|..
gi 2711936800 5843 DSAGRLTQITAPDGSLVVYGYDTQGNLVSARN 5874
Cdd:pfam05593 2 DAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTD 33
|
|
| Big_5 |
pfam13205 |
Bacterial Ig-like domain; |
4315-4423 |
1.17e-03 |
|
Bacterial Ig-like domain;
Pssm-ID: 463809 [Multi-domain] Cd Length: 105 Bit Score: 42.36 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4315 VIAPKVAATNPAPDAIVALPQGTISITFDSDMYAGAVNDSTSVlnpanfelVSANGTLTPQSVRYDAKTRTVLLDFNT-L 4393
Cdd:pfam13205 2 TTPPTVVSTTPADGATNVAVNSSITVTFSEAIDPATVNAAVVI--------VLSDGAGVPVTGTVSVDGKTVTITPSAaL 73
|
90 100 110
....*....|....*....|....*....|.
gi 2711936800 4394 TPD-HYSLRVSQNLKSTAGVELTGGYQEQFT 4423
Cdd:pfam13205 74 AANtTYTVTITAGIKDLAGNALAGPYTWSFT 104
|
|
| Peptidase_M10 |
pfam00413 |
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
233-258 |
1.47e-03 |
|
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis.
Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 43.37 E-value: 1.47e-03
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
2265-2376 |
1.66e-03 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 41.88 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2265 RPDLQVKSITAPTTANAGGTISLEFVVANEGTvgTTTPNWQDRVYLsldNKISYDDLSLGSfsnaaaLGSGESYrTQANT 2344
Cdd:pfam07705 1 LPDLIVQSISPPSEAYVGEENTITVTVKNQGT--AAAGAFNVALYV---DGTSVGTITVPG------LAAGEST-TVSFS 68
|
90 100 110
....*....|....*....|....*....|..
gi 2711936800 2345 LVIPKYfrGKAYLIVQTDAAGQVDEyPQESNN 2376
Cdd:pfam07705 69 WTPPTE--GSYTLTVVVDPDNTVAE-SNETNN 97
|
|
| CADG |
smart00736 |
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan ... |
4543-4630 |
3.68e-03 |
|
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.
Pssm-ID: 214795 [Multi-domain] Cd Length: 97 Bit Score: 40.79 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4543 ITSNPVLTAYTGQAYSYQV---TANDPDGAVLGYLL-----YDAPSGMTIDQNTGLITWSPTQQSPVSADVTLQVYDLRG 4614
Cdd:smart00736 1 ANAIGDQTATEGESFSYTIpssTFTDADGDTLTYSAtlsdgSALPSWLSFDSDTGTLSGTPTNSDVGSLSLKVTATDSSG 80
|
90
....*....|....*.
gi 2711936800 4615 AHTTQSFSLNVVGGNH 4630
Cdd:smart00736 81 ASASDTFTITVVNTND 96
|
|
| ZnMc_MMP |
cd04278 |
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
237-268 |
4.10e-03 |
|
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases).
Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 42.19 E-value: 4.10e-03
10 20 30
....*....|....*....|....*....|...
gi 2711936800 237 SFYVDLLTVVTHEIGHVLGLHHIEA-DQIMSAT 268
Cdd:cd04278 102 SGGTDLFSVAAHEIGHALGLGHSSDpDSIMYPY 134
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
2142-2242 |
8.60e-03 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 39.95 E-value: 8.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2142 PDLTVTNVTSPSNAQSGNKIDISWTVANSGTGDAvGSWTDQVFLKEVGGSEQLISlgtfnygnGLQAGKFYSRFeqFTLP 2221
Cdd:pfam07705 2 PDLIVQSISPPSEAYVGEENTITVTVKNQGTAAA-GAFNVALYVDGTSVGTITVP--------GLAAGESTTVS--FSWT 70
|
90 100
....*....|....*....|.
gi 2711936800 2222 STIQGLYEVVVKTNTSNSLYE 2242
Cdd:pfam07705 71 PPTEGSYTLTVVVDPDNTVAE 91
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2792-3193 |
1.94e-46 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 177.08 E-value: 1.94e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2792 SNNLGSATIPVIYQEPDLQVTNLIVPETSpTSGQTLGVSWTVKNIGTRDTRESSWYDrvylsrdeslDFNDTFLGEFTR- 2870
Cdd:COG1572 117 NENNNTVAVLISSGKPDLVVTSVTAPSTL-TPGTTITVSVTVNNQGSAPANGSSVDF----------DASDTLLGSFTVa 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2871 RGGLQQGQSYTGSSQITLPDGIAGNFYLLVFTDaninqqynklgfegnsTFARVPEFrDEGNNITAAPMKVVLQPPPDLQ 2950
Cdd:COG1572 186 SLTLAAGASYTFNPTLTLPVTASGNYYLLVVAD----------------PDNYVLET-NETNNTTAAAEITVSGTPPDLT 248
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2951 VTSVIIPERATSGQSFNIKYTVENKGTGNTPTrqnrWNDLIYLSRDEFLDLQsdrylgyvehTGGLTAGSSYTVNQTLQL 3030
Cdd:COG1572 249 VTSVTAPSTVVEGDTITVSATVKNQGTAAAGA----TTVAFYLSGDPVGTAS----------VGALAAGASYTVTVTITL 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3031 PNDlVGSYYVFVITDAPQSsagglVFEGNNEGNNATpslQPLVLELPPPADLQVDEITIPSNAKSGESVQISWKVTNYGD 3110
Cdd:COG1572 315 PAN-AGTYYLLAVVDPDNQ-----VAESNETNNVAS---SAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGT 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3111 NPASGQWsDAVYLSADAVWDINdrpigrvsYSGNLASGAEYTSTltaILPPATPGQYRIIVRPDIFNQVYEAeNEANNRT 3190
Cdd:COG1572 386 AAASGFT-VTLYLSGDATTDLT--------YVGSLAAGASYTVT---ISVTTASGQYYLLVVADPDNYVGES-NENNNVF 452
|
...
gi 2711936800 3191 TSA 3193
Cdd:COG1572 453 AVS 455
|
|
| NUC1 |
COG1864 |
DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism]; |
8056-8329 |
2.89e-41 |
|
DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism];
Pssm-ID: 441469 Cd Length: 238 Bit Score: 154.68 E-value: 2.89e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8056 DNVAYKSKHLKFGNPKEARysdtdpNPYKDNLLLERPQYTLSFNGTTNTANWASWQLDKYWFyikgkgypIADQQNKRNF 8135
Cdd:COG1864 1 DDAGYDPDFLLLGLPSLAR------ALSTNNYLLCYTGYSLSYNESRRTPNWVAYNLDGSWL--------GKSLKRSDDF 66
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8136 AKDPTLPPGFAAITDPYGakvdGISYDGGHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGn 8215
Cdd:COG1864 67 RPDPRLPSGYRATLADYT----GSGYDRGHLAPSADRTFSKEANSETFLMTNISPQAPDFNQGIWARLENYVRDLARKG- 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8216 KEVYITAGtdGIkklkDGSGEAKVIGSGGdITIPENIWMAmlVIDPDKEPTNNSyTIGFYLENREYSRpsnnaagisstp 8295
Cdd:COG1864 142 GEVYVVTG--PV----FDDGDLKTIGSGG-VAVPTAFWKV--VVDPDKNTGTLR-AIAFLLPNTALSS------------ 199
|
250 260 270
....*....|....*....|....*....|....
gi 2711936800 8296 NEWKLTVKSVNWIENKTGYDLFSNIDKTFQDEIE 8329
Cdd:COG1864 200 GPLRTYQVSVDEIEKLTGLDFFPNLPDDLEAALE 233
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2528-3065 |
1.45e-40 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 159.75 E-value: 1.45e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2528 LLTPPPDLVVTSVTPTTQALGGQPFS--VTWTVQNQGANATAQSNWVDNVYLSDSPTLNAPGAKRWFLGSVGHDGSLGVG 2605
Cdd:COG1572 1 VFDGVLVLESLSTADALSLEAGTALAaaVSSATLLGAGLATGTTATLVATNLGAGATSTGTAAADGDAALGSLSTTSTNT 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2606 GTYTGQLETILTPGASGRYIIVQTNYGNSVWEGPYTDNNQRSAETNVTSTPADLIVAKVKTLPQNFSGERTTVEWTVKNI 2685
Cdd:COG1572 81 ASSTNVLSTDVGTGPNTGAQTATATGGYADGNAGESNENNNTVAVLISSGKPDLVVTSVTAPSTLTPGTTITVSVTVNNQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2686 GADISSltrywyDEIWVSPDPTFILNRATkvgfvpySSQQPLRTGESYTQRQDITLPAGIDGEYYIYVSTNYSydrntek 2765
Cdd:COG1572 161 GSAPAN------GSSVDFDASDTLLGSFT-------VASLTLAAGASYTFNPTLTLPVTASGNYYLLVVADPD------- 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2766 frGEIPNSGDNNsyrqsfeyrvfedpsNNLGSATIPVIYQEPDLQVTNLIVPETsPTSGQTLGVSWTVKNIGTRDTreSS 2845
Cdd:COG1572 221 --NYVLETNETN---------------NTTAAAEITVSGTPPDLTVTSVTAPST-VVEGDTITVSATVKNQGTAAA--GA 280
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2846 WYDRVYLSRDESLDFNDtflgeftrrGGLQQGQSYTGSSQITLPDGiAGNFYLLVFTDANinqqynklgfegnstfARVP 2925
Cdd:COG1572 281 TTVAFYLSGDPVGTASV---------GALAAGASYTVTVTITLPAN-AGTYYLLAVVDPD----------------NQVA 334
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2926 EFrDEGNNITAAPMKVVLQPPPDLQVTSVIIPERATSGQSFNIKYTVENKGTGNTPTrqnrWNDLIYLSRDEFLDLQsdr 3005
Cdd:COG1572 335 ES-NETNNVASSAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGTAAASG----FTVTLYLSGDATTDLT--- 406
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3006 ylgyveHTGGLTAGSSYTVNQTlqlPNDLVGSYYVFVITDapqssAGGLVFEgNNEGNNA 3065
Cdd:COG1572 407 ------YVGSLAAGASYTVTIS---VTTASGQYYLLVVAD-----PDNYVGE-SNENNNV 451
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9380-9744 |
1.29e-38 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 162.13 E-value: 1.29e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9380 VSNVAPIVDAGADLTTDEGTAITFNGN-FTDP-GilDTHTITWDFGDGT--TAEGTLTPNHVFF-----NNGVYSVKLTV 9450
Cdd:NF038112 1183 VCNRRPVANAGPDQTVLERTTVTLNGSgSFDPdG--DPLTYAWTQVSGPavTLTGADTATPSFTapevtADTVLTFQLVV 1260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9451 KDNDGGENSDTLTVSVNNV--APTItNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTdAVIGSNVNHIFAD-- 9526
Cdd:NF038112 1261 SDGTKTSAPDTVTVLVRNVnrAPVA-VAGAPATVDERSTVTLDGSGTDADGDALTYAWTQTSGP-AVTLTGATTATATft 1338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9527 ------NGNYTVTLTVQDpdGAAT-QQTLTLSVSNV--APIVNAGADFTTDEGSAVTFNGNFTDPGiLDTHTIIWDFGDG 9597
Cdd:NF038112 1339 apevtaDTQLTFTLTVSD--GTASaTDTVTVTVRNVnrAPVANAGADQTVDERSTVTLSGSATDPD-GDALTYAWTQTAG 1415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9598 TTLEYTpHAPTPPHSPLTPThiYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDT-NVDEGTPAYFSATA 9676
Cdd:NF038112 1416 PTVTLT-GADTATASFTAPE--VAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESiTVDEGSTVTLDASA 1492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9677 TDPGNDTLTYTWNfgdgtdAVVGQNVNHTFADNGIYTVT-------------LTVSDEDGASTTKTLSTKVNNVAPTVAA 9743
Cdd:NF038112 1493 TDPDGDTLTYAWT------QVAGPSVTLTGADSAKLTFTapevsadttltfsLTVTDGSGSSGPVVVTVTVKNVNRAPDG 1566
|
.
gi 2711936800 9744 G 9744
Cdd:NF038112 1567 G 1567
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9011-9823 |
2.93e-37 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 157.94 E-value: 2.93e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9011 TFVGTDTFTYIILDNNAISN-EATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGK 9089
Cdd:TIGR00864 1055 IYAAPGEYLATVLASNAFENiSQQINMSVRAILPRVAIGTEDGLLLAGKPADFEAHPLPSPGGIHYEWDFGDGSALLQGR 1134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9090 Q--VNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIpKAGADITTDEGTAITfngsfIDPGIKDTHTITWDF-- 9165
Cdd:TIGR00864 1135 QpaAAHTFAKRGPFHVCLEVNNTISGAAACADMFAFEEIEGL-SADMSLATELGAATT-----VRAALQSGDNITWTFdm 1208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9166 GDGTTATGIlNPT--HTYNQDGVYTATLTVTdNDGATNSNSLTVTVNNIDPIINDISGDTNiNEGATAKFTATATNPSNd 9243
Cdd:TIGR00864 1209 GDGKSLSGP-EATveHKYAKAGNCTVNIGAA-NAAGHGARIIHVEVFVFEVAGIEPAACIG-EHADANFRARVSGNAAH- 1284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9244 tLTYTWNFGDDT--DPVVGQ-TVNHIFAQDGNYTVTLTVTdtsNGITSETLTVSVnNAAPIITNIS---GDTNINEGATA 9317
Cdd:TIGR00864 1285 -YLFDWSFGDGSpnETHHGCpGISHNFRGNGTFPLALTIS---SGVNKAHFFTQI-CVEPELGKISlqaEKQFFALGDEA 1359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9318 NFTATATDPGNdsITYTWDFGNG----ITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLtvnVSNVAPIVDAGADL 9393
Cdd:TIGR00864 1360 QFQACAEPEFN--YRYEWDFGGEeaapLPAAGAEVTFIYNDPGCYLVTVAASNNISAANDSAL---IEVLEPVGATSFKH 1434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9394 TTDEGTAITFNGN--FTDPGILDTHTITWDFGDGTTAEGtltPN--HVFFNNGVYSVKLTVKdNDGGENSDTLTVSVNNV 9469
Cdd:TIGR00864 1435 NGSHGNNLELGQPylFSAFGRARNASYLWDFGDGGLLEG---PEilHAFNSPGDFNIRLAAA-NEVGKNEATLNVAVKAR 1510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9470 APTITNVAGDINIEEGATATFSAiATDPGNDtLTYTWDFGDGTDAVIGSN-VNHIFADNGNYTVTLTVQDPDGAATQQTL 9548
Cdd:TIGR00864 1511 VRGLTINASLTNVPLNGSVHFEA-HLDAGDD-VRFSWILCDHCTPIFGGNtIFYTFRSVGTFNIIVTAENDVGAAQASIF 1588
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9549 TLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDpgilDTHTIIWD--FGDGTTLEYT--------PHAPTPPHSPLTPTH 9618
Cdd:TIGR00864 1589 LFVLQEIEGLQILGETAEGGGGGVQELDGCYFE----TNHTVQFHagFKDGTNLSFSwnaildnePDGPAFAGSGKGAKL 1664
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9619 IYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTnvdEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVV 9698
Cdd:TIGR00864 1665 NPLEAGPCDIFLQAANLLGQATADCTIDFLEPAGNLMLAASDNP---AAVNALINLSAELAEGSGLQYRWFLEEGDDLET 1741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9699 GQN-VNHTFADNGIYTVTLTVSDEDG---ASTTKTLSTKVNNVAPTVA-AGDNQIMYIGETVAFWGQftdpgiLDTHT-V 9772
Cdd:TIGR00864 1742 SEPfMSHSFPSAGLHLVTMKAFNELGsanASEEVDVQEPISGLKIRAAdAGEQNFFAADSSVCFQGE------LATGTnV 1815
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 9773 VWDFG-DSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTnNTLTVTVKKP 9823
Cdd:TIGR00864 1816 SWCWAiDGGSSKMGKHACMTFPDAGTFAIRLNASNAVSGKS-ASREFFAEEP 1866
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9021-9725 |
1.20e-33 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 146.00 E-value: 1.20e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9021 IILDNNAISNEATVTITVNN-IAPTIDNITVESNITEGTTATFSAIATDpGNDLTYTWNFGDGSNPVTGKQV-NHTFADN 9098
Cdd:TIGR00864 872 LMAENNASEANLSLLVQAEEpICGLRAQPHPAARVLMESLVRYSASVEA-GSDMTFKWTIDDKPFFTFQNTVfNVIYQHA 950
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9099 GTYTaiLTVTDTAGASTV-ETLLLNVNNIAPIP----KAGADITTDEGTAITFNGSFIDPGIKdtHTITWDFGDGTTATG 9173
Cdd:TIGR00864 951 AVFK--LSLTAMNHVSNLtEDFNVTVDRLNPMQglqvKGVPAVLPPGATLALTAGVLIDMAVE--AAFLWSFGDGEQALF 1026
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9174 ILNP----------------------THTYNQDGVYTATLTVTdNDGATNSNSLTVTVNNIDPIInDISGDTNINEGATA 9231
Cdd:TIGR00864 1027 EFKPpynesfpcpdpspaqvllehnvMHIYAAPGEYLATVLAS-NAFENISQQINMSVRAILPRV-AIGTEDGLLLAGKP 1104
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9232 KFTATATNPSNDTLTYTWNFGDDTdPVVGQT---VNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNaapiITNISGD 9308
Cdd:TIGR00864 1105 ADFEAHPLPSPGGIHYEWDFGDGS-ALLQGRqpaAAHTFAKRGPFHVCLEVNNTISGAAACADMFAFEE----IEGLSAD 1179
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9309 TNINEGATANFTATATDPGNDSITYTWDFGNGITKTGE--NVSHEFADEGTYNVTLTVQDSDGA-ATQETLTVNVSNVAP 9385
Cdd:TIGR00864 1180 MSLATELGAATTVRAALQSGDNITWTFDMGDGKSLSGPeaTVEHKYAKAGNCTVNIGAANAAGHgARIIHVEVFVFEVAG 1259
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9386 IVDAGAdltTDEGTAITFNGNFTdpGILDTHTITWDFGDG---TTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTl 9462
Cdd:TIGR00864 1260 IEPAAC---IGEHADANFRARVS--GNAAHYLFDWSFGDGspnETHHGCPGISHNFRGNGTFPLALTISSGVNKAHFFT- 1333
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9463 TVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNdtLTYTWDFGDGTDAVI---GSNVNHIFADNGNYTVTLTVQDP 9539
Cdd:TIGR00864 1334 QICVEPELGKISLQAEKQFFALGDEAQFQACAEPEFN--YRYEWDFGGEEAAPLpaaGAEVTFIYNDPGCYLVTVAASNN 1411
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9540 DGAATQqtlTLSVSNVAPIVNAGADFTTDEGSAVTFNGN--FTDPGILDTHTIIWDFGDGTTLEyTPHAptpphspltpT 9617
Cdd:TIGR00864 1412 ISAAND---SALIEVLEPVGATSFKHNGSHGNNLELGQPylFSAFGRARNASYLWDFGDGGLLE-GPEI----------L 1477
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9618 HIYADNGIYNVTLTVRdNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSaTATDPGNDtLTYTWNFGDGTDAV 9697
Cdd:TIGR00864 1478 HAFNSPGDFNIRLAAA-NEVGKNEATLNVAVKARVRGLTINASLTNVPLNGSVHFE-AHLDAGDD-VRFSWILCDHCTPI 1554
|
730 740
....*....|....*....|....*....
gi 2711936800 9698 VGQN-VNHTFADNGIYTVTLTVSDEDGAS 9725
Cdd:TIGR00864 1555 FGGNtIFYTFRSVGTFNIIVTAENDVGAA 1583
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2262-2653 |
1.42e-33 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 138.95 E-value: 1.42e-33
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2262 LTPRPDLQVKSITAPTTANAGGTISLEFVVANEGTVGTTTPNWQDrvylsldnkiSYDDLSLGSFSNAAA-LGSGESYrT 2340
Cdd:COG1572 128 SSGKPDLVVTSVTAPSTLTPGTTITVSVTVNNQGSAPANGSSVDF----------DASDTLLGSFTVASLtLAAGASY-T 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2341 QANTLVIPKYFRGKAYLIVQTDAAGQVDEYPQESNNIQAIEININSLPPaDLVTSQVIAPTLAFEGSKIKVRYTVTNLGI 2420
Cdd:COG1572 197 FNPTLTLPVTASGNYYLLVVADPDNYVLETNETNNTTAAAEITVSGTPP-DLTVTSVTAPSTVVEGDTITVSATVKNQGT 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2421 GETdrEVWTDTIWLtrdknrpspanrdgGAEDILLTSVGhsgSLKVGESYETEVELTlASQVTGEWYITPWSDAYNIVLE 2500
Cdd:COG1572 276 AAA--GATTVAFYL--------------SGDPVGTASVG---ALAAGASYTVTVTIT-LPANAGTYYLLAVVDPDNQVAE 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2501 DTlsinnnpddpnelDNNNYKARPITILLTPPPDLVVTSVTPTTQALGGQPFSVTWTVQNQGANATaqSNWVDNVYLSDS 2580
Cdd:COG1572 336 SN-------------ETNNVASSAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGTAAA--SGFTVTLYLSGD 400
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 2581 PTLnapgakrwflgSVGHDGSLGVGGTYTgqlETILTPGASGRY-IIVQTNYGNSVWEGPyTDNNQRSAETNVT 2653
Cdd:COG1572 401 ATT-----------DLTYVGSLAAGASYT---VTISVTTASGQYyLLVVADPDNYVGESN-ENNNVFAVSINVN 459
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
1875-2242 |
1.52e-32 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 135.87 E-value: 1.52e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1875 GGEENNNADKFIQLELASYADLAVNNVTVEElTIGDPATVSVSWTVTNLGKGSGKTSTWIDriiastdeklgNTDDIVLA 1954
Cdd:COG1572 113 AGESNENNNTVAVLISSGKPDLVVTSVTAPS-TLTPGTTITVSVTVNNQGSAPANGSSVDF-----------DASDTLLG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1955 NFTH-EGFLNDNEKYTRTERLRLTPGFQGRYKLFVQTDATEVVFENNlETNNTASAPNTfsVVPIPYADLLVSRVQAQAT 2033
Cdd:COG1572 181 SFTVaSLTLAAGASYTFNPTLTLPVTASGNYYLLVVADPDNYVLETN-ETNNTTAAAEI--TVSGTPPDLTVTSVTAPST 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2034 ASSGQQMQVSWSVTNsgIGTTNSNSWSDRVFLTSDPEGqniiadlgsFEHAGALAIGGNYNRSVDVTLPNGiSGNYYIVV 2113
Cdd:COG1572 258 VVEGDTITVSATVKN--QGTAAAGATTVAFYLSGDPVG---------TASVGALAAGASYTVTVTITLPAN-AGTYYLLA 325
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2114 TT---GGPFEFIYTNNNSriSNAIAVTFTPPPDLTVTNVTSPSNAQSGNKIDISWTVANSGTGDAVGSWtDQVFLKEVGG 2190
Cdd:COG1572 326 VVdpdNQVAESNETNNVA--SSAITVVGPPPPDLVVTSVSAPSTATAGSSVTVSVTVKNQGTAAASGFT-VTLYLSGDAT 402
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 2191 SeqlislgTFNYGNGLQAGKFYSrfeQFTLPSTIQGLYEVVVKTNTSNSLYE 2242
Cdd:COG1572 403 T-------DLTYVGSLAAGASYT---VTISVTTASGQYYLLVVADPDNYVGE 444
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9181-9809 |
2.42e-31 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 138.29 E-value: 2.42e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9181 YNQDGVYTATLTVTdNDGATNSNSLTVTVNNIDPIIN-DISGDTNI-NEGATAKFTATATNPSNDTLTYTWNFGDD---- 9254
Cdd:TIGR00864 947 YQHAAVFKLSLTAM-NHVSNLTEDFNVTVDRLNPMQGlQVKGVPAVlPPGATLALTAGVLIDMAVEAAFLWSFGDGeqal 1025
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9255 -------------TDPVVGQ-----TVNHIFAQDGNYTVTLTVTDTSNGITsETLTVSVNNAAPIITNISGDTNINEGAT 9316
Cdd:TIGR00864 1026 fefkppynesfpcPDPSPAQvllehNVMHIYAAPGEYLATVLASNAFENIS-QQINMSVRAILPRVAIGTEDGLLLAGKP 1104
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9317 ANFTATATdPGNDSITYTWDFGNG---ITKTGENVSHEFADEGTYNVTLTVQDS-DGAATQ---------ETLTVNVSnv 9383
Cdd:TIGR00864 1105 ADFEAHPL-PSPGGIHYEWDFGDGsalLQGRQPAAAHTFAKRGPFHVCLEVNNTiSGAAACadmfafeeiEGLSADMS-- 1181
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9384 apivdagadLTTDEGTAITFNGNFTDPgilDTHTITWDFGDGTTAEGT-LTPNHVFFNNGVYSVKLTVKDNDG-GENSDT 9461
Cdd:TIGR00864 1182 ---------LATELGAATTVRAALQSG---DNITWTFDMGDGKSLSGPeATVEHKYAKAGNCTVNIGAANAAGhGARIIH 1249
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9462 LTVSVNNVAptitNVAGDINIEEGATATFSAIATdpGN-DTLTYTWDFGDGT--DAVIGS-NVNHIFADNGNYTVTLTVQ 9537
Cdd:TIGR00864 1250 VEVFVFEVA----GIEPAACIGEHADANFRARVS--GNaAHYLFDWSFGDGSpnETHHGCpGISHNFRGNGTFPLALTIS 1323
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9538 DPDGAA---TQQTLTLSVSNVApiVNAGADFTTdEGSAVTFNGNFTDPGildTHTIIWDFGdgttleyTPHAPTPPHSPL 9614
Cdd:TIGR00864 1324 SGVNKAhffTQICVEPELGKIS--LQAEKQFFA-LGDEAQFQACAEPEF---NYRYEWDFG-------GEEAAPLPAAGA 1390
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9615 TPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGD--TNVDEGTPAYFSATATdpgNDTLTYTWNFGD 9692
Cdd:TIGR00864 1391 EVTFIYNDPGCYLVTVAASNNISAANDSALIEVLEPVGATSFKHNGShgNNLELGQPYLFSAFGR---ARNASYLWDFGD 1467
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9693 GtDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFtDPGilDTHTV 9772
Cdd:TIGR00864 1468 G-GLLEGPEILHAFNSPGDFNIRLAAANEVGKNEATLNVAVKARVRGLTINASLTNVPLNGSVHFEAHL-DAG--DDVRF 1543
|
650 660 670
....*....|....*....|....*....|....*...
gi 2711936800 9773 VWDFGDSNT-VAGTLRPTHIYNSNGTYSVTLTVTDDDG 9809
Cdd:TIGR00864 1544 SWILCDHCTpIFGGNTIFYTFRSVGTFNIIVTAENDVG 1581
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
2890-3287 |
2.75e-31 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 132.40 E-value: 2.75e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2890 DGIAGNFYLLVFTDANINQQYNKLGFEGNSTFARVPefrDEGNNITAAPmkvVLQPPPDLQVTSVIIPERATSGQSFNIK 2969
Cdd:COG1572 81 ASSTNVLSTDVGTGPNTGAQTATATGGYADGNAGES---NENNNTVAVL---ISSGKPDLVVTSVTAPSTLTPGTTITVS 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2970 YTVENKGTGNTPTRQNRWNDliylsrdefldlqSDRYLGYVEH-TGGLTAGSSYTVNQTLQLPNDLVGSYYVFVITDApq 3048
Cdd:COG1572 155 VTVNNQGSAPANGSSVDFDA-------------SDTLLGSFTVaSLTLAAGASYTFNPTLTLPVTASGNYYLLVVADP-- 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3049 ssaGGLVFEgNNEGNNATpSLQPLVLELPPPaDLQVDEITIPSNAKSGESVQISWKVTNYGdNPASGQWSDAVYLSADAV 3128
Cdd:COG1572 220 ---DNYVLE-TNETNNTT-AAAEITVSGTPP-DLTVTSVTAPSTVVEGDTITVSATVKNQG-TAAAGATTVAFYLSGDPV 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3129 WDINDRPigrvsysgnLASGAEYTSTLTAIlPPATPGQYRIIVRPDIFNQVYEAeNEANNrtTSADSLNVT-VEQLQLGV 3207
Cdd:COG1572 293 GTASVGA---------LAAGASYTVTVTIT-LPANAGTYYLLAVVDPDNQVAES-NETNN--VASSAITVVgPPPPDLVV 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3208 AKQTTLSTGFerlfainlqAGQTLRINA------NSDAKEAANEIFVRyqqapTSIAYDAAYTGILGPNQSV---IIPTT 3278
Cdd:COG1572 360 TSVSAPSTAT---------AGSSVTVSVtvknqgTAAASGFTVTLYLS-----GDATTDLTYVGSLAAGASYtvtISVTT 425
|
....*....
gi 2711936800 3279 QSGTYYVLV 3287
Cdd:COG1572 426 ASGQYYLLV 434
|
|
| COG1572 |
COG1572 |
Serine protease, subtilase family [Posttranslational modification, protein turnover, ... |
1598-2013 |
1.09e-28 |
|
Serine protease, subtilase family [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 441180 [Multi-domain] Cd Length: 459 Bit Score: 124.31 E-value: 1.09e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1598 INNNSNSSIVFTPESGINYKVRVTSDFSDVTGTYTLNSQTKAPDLIVKSVFTPPTASIGQTTDISWTVANTGSLSATQAW 1677
Cdd:COG1572 90 DVGTGPNTGAQTATATGGYADGNAGESNENNNTVAVLISSGKPDLVVTSVTAPSTLTPGTTITVSVTVNNQGSAPANGSS 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1678 TDrvylikentngtfdgvtLPSSAIFLDILRHETGLAANDEYTTPVRKVLLPEVEDGDYRIVVITDFDNSILEGKDENNL 1757
Cdd:COG1572 170 VD-----------------FDASDTLLGSFTVASLTLAAGASYTFNPTLTLPVTASGNYYLLVVADPDNYVLETNETNNT 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1758 RVSEQV-LSIGHVDLVPTIIYSPATATSGTTIPLKWSVTNNGSAdTVGGWVDRIYLSSDTkfdpsdlllTERKYNGSLSS 1836
Cdd:COG1572 233 TAAAEItVSGTPPDLTVTSVTAPSTVVEGDTITVSATVKNQGTA-AAGATTVAFYLSGDP---------VGTASVGALAA 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1837 GATTDElELNIAIPLDVSSdryRYLLVVTDADNQIKELgGEENNNADKFIQLELASYADLAVNNVTV-EELTIGDpaTVS 1915
Cdd:COG1572 303 GASYTV-TVTITLPANAGT---YYLLAVVDPDNQVAES-NETNNVASSAITVVGPPPPDLVVTSVSApSTATAGS--SVT 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1916 VSWTVTNlgKGSGKTSTWIDRIIASTDEKLGNtddivlanfTHEGFLNDNEKYTRTERLRLTPgfqGRYKLFVQTDATEV 1995
Cdd:COG1572 376 VSVTVKN--QGTAAASGFTVTLYLSGDATTDL---------TYVGSLAAGASYTVTISVTTAS---GQYYLLVVADPDNY 441
|
410
....*....|....*...
gi 2711936800 1996 VFENNlETNNTASAPNTF 2013
Cdd:COG1572 442 VGESN-ENNNVFAVSINV 458
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9125-9472 |
3.03e-28 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 127.85 E-value: 3.03e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9125 NIAPIPKAGADITTDEGTAITFNGS-FIDPGiKDTHTITWDFGDGTTAT----GILNPTHT---YNQDGVYTATLTVTDN 9196
Cdd:NF038112 1185 NRRPVANAGPDQTVLERTTVTLNGSgSFDPD-GDPLTYAWTQVSGPAVTltgaDTATPSFTapeVTADTVLTFQLVVSDG 1263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9197 DGATNSNSLTVTVNNID--PIINdISGDTNINEGATAKFTATATNPSNDTLTYTWN--------FGDDTDPVVGQTVNHI 9266
Cdd:NF038112 1264 TKTSAPDTVTVLVRNVNraPVAV-AGAPATVDERSTVTLDGSGTDADGDALTYAWTqtsgpavtLTGATTATATFTAPEV 1342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9267 FAqDGNYTVTLTVTDtsnGITSETLTVSVN----NAAPIItNISGDTNINEGATANFTATATDPGNDSITYTWD--FGNG 9340
Cdd:NF038112 1343 TA-DTQLTFTLTVSD---GTASATDTVTVTvrnvNRAPVA-NAGADQTVDERSTVTLSGSATDPDGDALTYAWTqtAGPT 1417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9341 ITKTGEN-VSHEF-ADEGTYNVTLTVQ--DSDGAATQETLTVNVS----NVAPIVDAGADLTTDEGTAITFNGNFTDP-G 9411
Cdd:NF038112 1418 VTLTGADtATASFtAPEVAADTELTFQltVSADGQASADVTVTVTvrnvNRAPVAHAGESITVDEGSTVTLDASATDPdG 1497
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9412 ilDTHTITWDFGDGT--TAEGTLTPNHVFFNNGVYS-----VKLTVKDNDGGENSDTLTVSVNNVAPT 9472
Cdd:NF038112 1498 --DTLTYAWTQVAGPsvTLTGADSAKLTFTAPEVSAdttltFSLTVTDGSGSSGPVVVTVTVKNVNRA 1563
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
8834-10413 |
8.92e-27 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 122.95 E-value: 8.92e-27
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8834 TILDTHLGTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVK 8913
Cdd:COG3210 115 TLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8914 IDISSITPGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTN 8993
Cdd:COG3210 195 TGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIG 274
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8994 GSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDL 9073
Cdd:COG3210 275 TTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGT 354
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9074 TYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDP 9153
Cdd:COG3210 355 TGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLG 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9154 GIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKF 9233
Cdd:COG3210 435 ITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGL 514
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9234 TATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINE 9313
Cdd:COG3210 515 TGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGT 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9314 GATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADL 9393
Cdd:COG3210 595 NSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTGSAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGT 674
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9394 TTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTI 9473
Cdd:COG3210 675 TGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVTGQIGALANANGDTVTFGNLGTGATLTLNAGVTITSGNA 754
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9474 TNVAGDINIEEGATATFSAIATDPGNDTL-TYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSV 9552
Cdd:COG3210 755 GTLSIGLTANTTASGTTLTLANANGNTSAgATLDNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTG 834
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9553 SNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTV 9632
Cdd:COG3210 835 DTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLA 914
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9633 RDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIY 9712
Cdd:COG3210 915 TVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAAT 994
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9713 TVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIY 9792
Cdd:COG3210 995 GILVAGNSGTTASTTGGSGAIVAGGNGVTGTTGTASATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTA 1074
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9793 NSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGS 9872
Cdd:COG3210 1075 ASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTTTSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAV 1154
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9873 DYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITDKTITESDNGT 9952
Cdd:COG3210 1155 AGGASSASAGDTTAVAAATTTTTGSAINGGADSAATEGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATG 1234
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9953 TTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATI 10032
Cdd:COG3210 1235 GSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGATSTVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATV 1314
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10033 TDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGET 10112
Cdd:COG3210 1315 GTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANTGLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAE 1394
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10113 SQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINGSGDFDGNPLDLYDDTLIY 10192
Cdd:COG3210 1395 GTNAGRDGGVTTSGTGVGNNGGVSGTTVAGTTGSSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAG 1474
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10193 AAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLVPPQIVEPQTIIVPAYASVKQQ 10272
Cdd:COG3210 1475 NAVGGAVIGGTTTGGNGAGVAGATASNGGTSTGAGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGS 1554
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10273 ELERRIPTGATTLTFNMQQNPMNNAADWAKKFPPSGTASNPTVVRVTGGGLNIPANVSLNNYVIIVEQGDINFNGSGHNL 10352
Cdd:COG3210 1555 EGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQAPTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVV 1634
|
1530 1540 1550 1560 1570 1580
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 10353 NNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITFNGATST 10413
Cdd:COG3210 1635 TTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNGWAVDLTDATLAGLGGATTAAAGNVATGD 1695
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9125-9209 |
6.22e-26 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 105.05 E-value: 6.22e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9125 NIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGiLNPTHTYNQDGVYTATLTVTDNDGA-TNSN 9203
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-ANVSHTYAAPGTYTVTLTVTDDSGAsNSTA 79
|
....*.
gi 2711936800 9204 SLTVTV 9209
Cdd:pfam18911 80 TDTVTV 85
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
8993-9757 |
3.13e-25 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 118.26 E-value: 3.13e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8993 NGSIIINNDRTLTytpNNTFVGTDTFTYIILDNNAISNEATVTITvnNIAPTIDNITVESNI-TEGTTATFSAIATDPGN 9071
Cdd:TIGR00864 1126 DGSALLQGRQPAA---AHTFAKRGPFHVCLEVNNTISGAAACADM--FAFEEIEGLSADMSLaTELGAATTVRAALQSGD 1200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9072 DLTYTWNFGDGSNpVTGKQ--VNHTFADNGTYTAILTVTDTAGAST----VETLLLNVNNIAPIPKAGADITTDEGTAIT 9145
Cdd:TIGR00864 1201 NITWTFDMGDGKS-LSGPEatVEHKYAKAGNCTVNIGAANAAGHGAriihVEVFVFEVAGIEPAACIGEHADANFRARVS 1279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9146 FNGSfidpgikdTHTITWDFGDG---TTATGILNPTHTYNQDGVYTATLTVTDndGATNSNSLTVTVnnIDPIINDIS-- 9220
Cdd:TIGR00864 1280 GNAA--------HYLFDWSFGDGspnETHHGCPGISHNFRGNGTFPLALTISS--GVNKAHFFTQIC--VEPELGKISlq 1347
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9221 -GDTNINEGATAKFTATATNPSNdtLTYTWNFGDDTD---PVVGQTVNHIFAQDGNYTVTLTvtdTSNGITSETLTVSVN 9296
Cdd:TIGR00864 1348 aEKQFFALGDEAQFQACAEPEFN--YRYEWDFGGEEAaplPAAGAEVTFIYNDPGCYLVTVA---ASNNISAANDSALIE 1422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9297 NAAPIitnisGDTNINEGATANFTATATDP-------GNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDG 9369
Cdd:TIGR00864 1423 VLEPV-----GATSFKHNGSHGNNLELGQPylfsafgRARNASYLWDFGDGGLLEGPEILHAFNSPGDFNIRLAAANEVG 1497
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9370 A----------ATQETLTVNVSNVAPIVDAGADLTT--DEGTAITFngnftdpgildthtiTWDFGDGTTA-EGTLTPNH 9436
Cdd:TIGR00864 1498 KneatlnvavkARVRGLTINASLTNVPLNGSVHFEAhlDAGDDVRF---------------SWILCDHCTPiFGGNTIFY 1562
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9437 VFFNNGVYSVKLTVkDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATdPGNDTLTYTWDFGDGTDAVI 9516
Cdd:TIGR00864 1563 TFRSVGTFNIIVTA-ENDVGAAQASIFLFVLQEIEGLQILGETAEGGGGGVQELDGCYF-ETNHTVQFHAGFKDGTNLSF 1640
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9517 GSNV-------NHIFADNGNyTVTLTVQDPD------------GAAT----------QQTLTLSVSNVAPIVNAGADFTT 9567
Cdd:TIGR00864 1641 SWNAildnepdGPAFAGSGK-GAKLNPLEAGpcdiflqaanllGQATadctidflepAGNLMLAASDNPAAVNALINLSA 1719
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9568 D--EGSAVTFNgnftdpgildthtiiWDFGDGTTLEYTphaptpphSPLTpTHIYADNGIYNVTLTVrDNDGGVTIDTLT 9645
Cdd:TIGR00864 1720 ElaEGSGLQYR---------------WFLEEGDDLETS--------EPFM-SHSFPSAGLHLVTMKA-FNELGSANASEE 1774
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9646 VTVNNVgptitdISG--DTNVDEGTPAYFSATATDPGNDTLT----YTWNFG-DGTDAVVGQNVNHTFADNGIYTVTLTV 9718
Cdd:TIGR00864 1775 VDVQEP------ISGlkIRAADAGEQNFFAADSSVCFQGELAtgtnVSWCWAiDGGSSKMGKHACMTFPDAGTFAIRLNA 1848
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 2711936800 9719 S-DEDGASTTKTLSTKVNNVAPTVAAgDNQIMYIGETVAF 9757
Cdd:TIGR00864 1849 SnAVSGKSASREFFAEEPIFGLELKA-SKKIAAIGEKVEF 1887
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9056-9400 |
6.65e-24 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 113.60 E-value: 6.65e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9056 EGTTATFSAIA-TDP-GNDLTYTWNfgdgsnPVTGKQVNHTFADNGT---------YTAI----LTVTD---TAGASTVE 9117
Cdd:NF038112 1200 ERTTVTLNGSGsFDPdGDPLTYAWT------QVSGPAVTLTGADTATpsftapevtADTVltfqLVVSDgtkTSAPDTVT 1273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9118 TLLLNVNNiAPIPKAGADITTDEGTAITFNGSFIDPGiKDTHTITWDFGDGTTAT----GILNPTHTYNQ---DGVYTAT 9190
Cdd:NF038112 1274 VLVRNVNR-APVAVAGAPATVDERSTVTLDGSGTDAD-GDALTYAWTQTSGPAVTltgaTTATATFTAPEvtaDTQLTFT 1351
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9191 LTVTDNdGATNSNSLTVTVNNID--PIINDISgDTNINEGATAKFTATATNPSNDTLTYTWNfgddtdPVVGQTVNHIFA 9268
Cdd:NF038112 1352 LTVSDG-TASATDTVTVTVRNVNraPVANAGA-DQTVDERSTVTLSGSATDPDGDALTYAWT------QTAGPTVTLTGA 1423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9269 QD-----------GNYTVTLTVTDTSNGITSETLTVSVN----NAAPIItNISGDTNINEGATANFTATATDPGNDSITY 9333
Cdd:NF038112 1424 DTatasftapevaADTELTFQLTVSADGQASADVTVTVTvrnvNRAPVA-HAGESITVDEGSTVTLDASATDPDGDTLTY 1502
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 9334 TWDF--GNGITKTGEN------VSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTA 9400
Cdd:NF038112 1503 AWTQvaGPSVTLTGADsakltfTAPEVSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNRAPDGGGCSSTGGSPG 1577
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9382-9466 |
3.36e-23 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 97.34 E-value: 3.36e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9382 NVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGtLTPNHVFFNNGVYSVKLTVKDNDGGENS-D 9460
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-ANVSHTYAAPGTYTVTLTVTDDSGASNStA 79
|
....*.
gi 2711936800 9461 TLTVSV 9466
Cdd:pfam18911 80 TDTVTV 85
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5098-5448 |
6.11e-23 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 110.13 E-value: 6.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5098 DRNQDNLSFN---LSGLPV---GA-TLTPTgiygealFqwtpTAADInTYPVTIA----VSD-SGNGNPNEVFVSqqqfn 5165
Cdd:NF038112 1213 DPDGDPLTYAwtqVSGPAVtltGAdTATPS-------F----TAPEV-TADTVLTfqlvVSDgTKTSAPDTVTVL----- 1275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5166 liVRTANTTPVLAAIGNSSVAEGQTLNLVLSASDADGDTLTYSATNL--PPGAVLDPVQGILTWTPNLSQAGTYNNITLT 5243
Cdd:NF038112 1276 --VRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADGDALTYAWTQTsgPAVTLTGATTATATFTAPEVTADTQLTFTLT 1353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5244 ASDGNKSSSQSFAITVNNTNQAPVLAPLPIQTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVL---DPRTGKFTwK 5320
Cdd:NF038112 1354 VSDGTASATDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDGDALTYAWTQTAGPTVTLtgaDTATASFT-A 1432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5321 PNYEQAGEYVLKFAVKDTQNATSQSDVTLRVANVNRSPVISVSPHA-VALGEKLQFQVVGTDPDNNTnLTFSAANLPDEA 5399
Cdd:NF038112 1433 PEVAADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESItVDEGSTVTLDASATDPDGDT-LTYAWTQVAGPS 1511
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 5400 V-LDAATGMFSWMPSPGQVGDYAVTYA--VSDGETTvTQTSTVRVAIAPTPP 5448
Cdd:NF038112 1512 VtLTGADSAKLTFTAPEVSADTTLTFSltVTDGSGS-SGPVVVTVTVKNVNR 1562
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9650-9734 |
1.58e-22 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 95.42 E-value: 1.58e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9650 NVGPTItDISGDTNVDEGTPAYFSATATDPGN-DTLTYTWNFGDGTdAVVGQNVNHTFADNGIYTVTLTVSDEDGAST-T 9727
Cdd:pfam18911 1 NAAPVA-DAGGDRIVAEGETVTFDASASDDPDgDILSYRWDFGDGT-TATGANVSHTYAAPGTYTVTLTVTDDSGASNsT 78
|
....*..
gi 2711936800 9728 KTLSTKV 9734
Cdd:pfam18911 79 ATDTVTV 85
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9554-9648 |
2.40e-22 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 95.03 E-value: 2.40e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9554 NVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYtphaptpphspLTPTHIYADNGIYNVTLTVR 9633
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-----------ANVSHTYAAPGTYTVTLTVT 69
|
90
....*....|....*.
gi 2711936800 9634 DNDGGVTI-DTLTVTV 9648
Cdd:pfam18911 70 DDSGASNStATDTVTV 85
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9468-9552 |
2.18e-21 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 92.33 E-value: 2.18e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9468 NVAPTItNVAGDINIEEGATATFSAIATDPGN-DTLTYTWDFGDGTDAViGSNVNHIFADNGNYTVTLTVQDPDGAAT-Q 9545
Cdd:pfam18911 1 NAAPVA-DAGGDRIVAEGETVTFDASASDDPDgDILSYRWDFGDGTTAT-GANVSHTYAAPGTYTVTLTVTDDSGASNsT 78
|
....*..
gi 2711936800 9546 QTLTLSV 9552
Cdd:pfam18911 79 ATDTVTV 85
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9736-9820 |
3.25e-21 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 91.56 E-value: 3.25e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9736 NVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGtLRPTHIYNSNGTYSVTLTVTDDDGGVTN-N 9814
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASDDPDGDILSYRWDFGDGTTATG-ANVSHTYAAPGTYTVTLTVTDDSGASNStA 79
|
....*.
gi 2711936800 9815 TLTVTV 9820
Cdd:pfam18911 80 TDTVTV 85
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
9856-10047 |
8.84e-21 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 102.56 E-value: 8.84e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9856 TVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSD----------ATNATIADAQ- 9924
Cdd:TIGR00845 432 TVYVDYRTEDGTANAGSDYEFTEGTLVFKPGETQKEFRIGIIDDDIFEEDEHFYVRLSNlrvgsedgilEANHVSAVAQl 511
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9925 -----AVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKpVTVNFATANGTAIAGS-DYTATSGTLSFAPG 9998
Cdd:TIGR00845 512 aspntATVTILDDDHAGIFTFEEDVFHVSESIGIMEVKVLRTSGARGT-VIVPYRTVEGTARGGGkDFEDTCGELEFEND 590
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9999 ETTKTISVQLNGDITDEYDETFFLNLSD------------ATNATITDAQAVGTILDNDAP 10047
Cdd:TIGR00845 591 ETEKTIRVKIVDDEEYEKNDTFFIELGEprwakrgikaalLLNETITDDDQKLTSKEEEER 651
|
|
| Endonuclease_NS |
pfam01223 |
DNA/RNA non-specific endonuclease; |
8085-8322 |
1.75e-20 |
|
DNA/RNA non-specific endonuclease;
Pssm-ID: 460120 Cd Length: 220 Bit Score: 94.42 E-value: 1.75e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8085 DNLLLERPQYTLSFNGTTNTANWASWQLDKYWFYIkgkgypiADQQNKRNFAKDPTLPPG-FAAITDPYGAKvdgiSYDG 8163
Cdd:pfam01223 15 SDVVLFYKYYSLCYDRRTRRALWVAHHLTGASLAG-------SKGRRRPGFKQDPRIPGAyFRTLYTDYTGS----GFDR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8164 GHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAGTDGIKKLKDgsgeakvigsG 8243
Cdd:pfam01223 84 GHLAPAADFKFSAGANAATFNFTNIAPQWAGFNQGNWAYLENYVRDLAARHNNSVYVYTGPLYVPNLLD----------K 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 8244 GDITIPENIWMAmlVIDPDKEPTNNSYTIGFYLENREYSRPSnnaagisstpnEWKLTVKSVNWIENKTGYDLFSNIDK 8322
Cdd:pfam01223 154 NKVAVPTHFWKV--ILSEDGDGGGGLNAPAFVLPNKYILDDG-----------PLRTFQVPVDELERLTGLDFCCGVPD 219
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9007-9300 |
1.85e-20 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 102.04 E-value: 1.85e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9007 TPNNTFVGTD-------TFTYIILDNNAISNEATVTITVNNI--APTIdNITVESNITEGTTATFSAIATDP-GNDLTYT 9076
Cdd:NF038112 1238 TATPSFTAPEvtadtvlTFQLVVSDGTKTSAPDTVTVLVRNVnrAPVA-VAGAPATVDERSTVTLDGSGTDAdGDALTYA 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9077 WnFGDGSNPVTGKQVNH---TF-----ADNGTYTAILTVTD--TAGASTVETLLLNVNNiAPIPKAGADITTDEGTAITF 9146
Cdd:NF038112 1317 W-TQTSGPAVTLTGATTataTFtapevTADTQLTFTLTVSDgtASATDTVTVTVRNVNR-APVANAGADQTVDERSTVTL 1394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9147 NGSFIDPGiKDTHTITWDFGDGTTAT----GILNPTHTYNQ---DGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDI 9219
Cdd:NF038112 1395 SGSATDPD-GDALTYAWTQTAGPTVTltgaDTATASFTAPEvaaDTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAH 1473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9220 SGDT-NINEGATAKFTATATNPSNDTLTYTW--------NFGDDTDPVVGQTVNHIfAQDGNYTVTLTVTDTSNGITSET 9290
Cdd:NF038112 1474 AGESiTVDEGSTVTLDASATDPDGDTLTYAWtqvagpsvTLTGADSAKLTFTAPEV-SADTTLTFSLTVTDGSGSSGPVV 1552
|
330
....*....|
gi 2711936800 9291 LTVSVNNAAP 9300
Cdd:NF038112 1553 VTVTVKNVNR 1562
|
|
| NUC |
cd00091 |
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA ... |
8065-8323 |
2.89e-20 |
|
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
Pssm-ID: 238043 Cd Length: 241 Bit Score: 94.36 E-value: 2.89e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8065 LKFGNPKEARysdtdpnpykDNLLLERPQYTLSFNGTTNTANWASWQLDKYWFYIKGKGypiadqqNKRNFAKDPTLPPG 8144
Cdd:cd00091 1 LQYGRPGVLA----------DTEVLSYTHYVLSYNRATRLPLWVAEHIDKEDLGKNVDR-------KYDQFKQDPRIPPL 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8145 F-AAITDPYGAKvdgiSYDGGHLTPVKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAG 8223
Cdd:cd00091 64 FsATNSDYKGSG----SLDRGHLAPAADPVWSQDAQDATFYLTNMAPQVQGFNQGNWAYLEDYLRDLAASEGKDVYVVTG 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8224 TDGIKKL--KDGSGEAKVIGSGGDITIPENIWMAMLVIDPDKEPTNNSYTIGfylenreysrpsNNAAGISSTPNEWKLT 8301
Cdd:cd00091 140 PLFLPDLdgDGGSYLSTQVINNGKVAVPTHFWKVIIDEKAPGNLSVGAFVLP------------NNNPHDTLEFILCVEK 207
|
250 260
....*....|....*....|....
gi 2711936800 8302 VKSVNW--IENKTGYDLFSNIDKT 8323
Cdd:cd00091 208 TFQVPVasVEKATGLSFFCNVPDS 231
|
|
| NUC |
smart00477 |
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA ... |
8093-8321 |
7.35e-20 |
|
DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases
Pssm-ID: 214683 Cd Length: 210 Bit Score: 92.04 E-value: 7.35e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8093 QYTLSFNGTTNTANWASWQLDKYWfyikGKGYPIADQqnkRNFAKDPTLPPGFAAITDPYGakvdGISYDGGHLTPVKHR 8172
Cdd:smart00477 3 QYVLGYNRSTRMPNWVAYHITGEL----LTSGAERKS---DCFKPDTRIPEKFQAKLSDYK----GSGYDRGHLAPAADH 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8173 NRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAGT----DGIKKLKDGSGEAKVIGSgGDITI 8248
Cdd:smart00477 72 KFSSEAMADTFYLSNIVPQYPDFNRGAWAYLEDYLRKLTASERNGVYVVSGPlflpNYDGKGDKLEVKYQVIGS-KNVAI 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 8249 PENIWMamlVIDPDKePTNNSYTIGFYLENreysRPSNNAAgisstpnEWKLTVKSVNWIENKTGYDLFSNID 8321
Cdd:smart00477 151 PTHFFK---VITAEK-ADSYLEVAAFILPN----DPINDES-------PLTNFRVPVDEIERLTGLDFFRNLD 208
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4720-5074 |
1.44e-19 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 99.35 E-value: 1.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4720 QFTVSDGVE-RVTQTATILIANINQAPTLIRPADTIVREGEKVRIQLQATDADIiasiPPLSTSDFQLPTSLLTYNSNLL 4798
Cdd:NF038112 1257 QLVVSDGTKtSAPDTVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADG----DALTYAWTQTSGPAVTLTGATT 1332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4799 PGGSTLDPRTGLFEwtpayfqagEFEIPFTVSDGESVTTQTTKITVLNANAAPIFDNIGTWQVQEGQSVRFRAFAFDPDN 4878
Cdd:NF038112 1333 ATATFTAPEVTADT---------QLTFTLTVSDGTASATDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDG 1403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4879 PGFVPQDRNADGQLTILEGSDpsviytvsdlpvgatfdpiTAMFVWTPGYTSAGTyNVTFTATDDGNGtgiTKATSLTVP 4958
Cdd:NF038112 1404 DALTYAWTQTAGPTVTLTGAD-------------------TATASFTAPEVAADT-ELTFQLTVSADG---QASADVTVT 1460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4959 ISVLNSNRAPEINEFSNITLNRGEVKELVLQATDADGDPLVLQ--------LKAESAGYGIPDFVrfidngdrtatlrlA 5030
Cdd:NF038112 1461 VTVRNVNRAPVAHAGESITVDEGSTVTLDASATDPDGDTLTYAwtqvagpsVTLTGADSAKLTFT--------------A 1526
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2711936800 5031 PGINDGGNYSFTLTATDnGNGSanaiqSDEYTFVVSVNTLNDPP 5074
Cdd:NF038112 1527 PEVSADTTLTFSLTVTD-GSGS-----SGPVVVTVTVKNVNRAP 1564
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
8972-9882 |
1.70e-19 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 99.07 E-value: 1.70e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8972 AINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVE 9051
Cdd:COG3210 797 DITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAAS 876
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9052 SNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPK 9131
Cdd:COG3210 877 ITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSA 956
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9132 AGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGilnpthTYNQDGVYTATLTVTDNDGATNSNSLTVTVNN 9211
Cdd:COG3210 957 ASASDGAGDTGASSAAGSSAVGTSANSAGSTGGVIAATGILV------AGNSGTTASTTGGSGAIVAGGNGVTGTTGTAS 1030
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9212 IDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETL 9291
Cdd:COG3210 1031 ATGTGTAATAGGQNGVGVNASGISGGNAAALTASGTAGTTGGTAASNGGGGTAQASGAGTTHTLGGITNGGATGTSGGTT 1110
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9292 TVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAA 9371
Cdd:COG3210 1111 TSTGGVTASKVGGTTTVGATGTSTASTEAAGAGTLTGLVAVSAVAGGASSASAGDTTAVAAATTTTTGSAINGGADSAAT 1190
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9372 TQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVK 9451
Cdd:COG3210 1191 EGTAGTDLKGGDSTGGSTTTIGTTNVTTTTTLTASDTGNTTATGGSSAGQTGSFVAAGSASGTGDATTGATAGAVSNGAT 1270
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9452 DNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYT 9531
Cdd:COG3210 1271 STVAGNAGATATGSTVDIGSTSATSAGGSLDTTGNTAGANGATVGTGIGGTTATGTAVAAVNSGGVNAGGGTINTTAANT 1350
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9532 VTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDThtiIWDFGDGTTLEYTPHAPTPPH 9611
Cdd:COG3210 1351 GLNGGNGATDSAAGAGSGGAAGSLAATAGAGTVLTGAGNNTGAEGTNAGRDGGVTT---SGTGVGNNGGVSGTTVAGTTG 1427
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9612 SPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFG 9691
Cdd:COG3210 1428 SSATTGTGGTGNTTGTSVAGAGGGNADASAINTGNASSLGAGGSTAGNAVGGAVIGGTTTGGNGAGVAGATASNGGTSTG 1507
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9692 DGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHT 9771
Cdd:COG3210 1508 AGGTAGGTTAEVAKASLEGGEGTYGGSSVAEAGTGGGILGAVSGAGSEGGAAGGVTGSVGVGGTDGAGGDTGGADDTGAQ 1587
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9772 VVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSE 9851
Cdd:COG3210 1588 APTAGNTATLTLSLAEGTNAEYGGTTNVTSGTAGNAGATGANSNTVVTTNGGEGVLALVAGGNTTNGTTLSGAVNGAGNG 1667
|
890 900 910
....*....|....*....|....*....|.
gi 2711936800 9852 ASLRTVTANFATADGTAITGSDYLATTGTIT 9882
Cdd:COG3210 1668 WAVDLTDATLAGLGGATTAAAGNVATGDTAP 1698
|
|
| Endonuclease_NS |
smart00892 |
DNA/RNA non-specific endonuclease; A family of bacterial and eukaryotic endonucleases share ... |
8091-8322 |
5.48e-19 |
|
DNA/RNA non-specific endonuclease; A family of bacterial and eukaryotic endonucleases share the following characteristics: they act on both DNA and RNA, cleave double-stranded and single-stranded nucleic acids and require a divalent ion such as magnesium for their activity. An histidine has been shown to be essential for the activity of the Serratia marcescens nuclease. This residue is located in a conserved region which also contains an aspartic acid residue that could be implicated in the binding of the divalent ion.
Pssm-ID: 214889 [Multi-domain] Cd Length: 198 Bit Score: 89.39 E-value: 5.48e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8091 RPQYTLSFNGTTNTANWASWQLDKYWFYIKGKGypiadqqNKRNFAKDP--TLPPGFAAITDPYGAKVdgisYDGGHLTP 8168
Cdd:smart00892 1 YKHYALCYDERRRLPLWVAYHLTGSTRQGKNTG-------RKRPWFKPDgwHLPAIFQAVNSDYTGSG----YDRGHLAP 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8169 VKHRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAGTDGIKKLKDgsgeakvigsgGDITI 8248
Cdd:smart00892 70 AADHGVSQEAMAATFYLTNIVPQTAGFNQGNWNRLENYVRKLLAKNKDTVYVVTGPIYLPTLPD-----------NNVAV 138
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 8249 PENIWMAMLVIDPDKEPTNnsyTIGFYLENreysRPSNNAAGISStpnewklTVKSVNWIENKTGYDLFSNIDK 8322
Cdd:smart00892 139 PSHFWKVILSEDGSNGGLA---AIAFNLPN----APINEDYPLCE-------FQVPVDNIERLTGLDFFCGLPD 198
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9040-9115 |
7.06e-19 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 85.01 E-value: 7.06e-19
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9040 NIAPTIDnITVESNITEGTTATFSAIATDPGND--LTYTWNFGDGSnPVTGKQVNHTFADNGTYTAILTVTDTAGAST 9115
Cdd:pfam18911 1 NAAPVAD-AGGDRIVAEGETVTFDASASDDPDGdiLSYRWDFGDGT-TATGANVSHTYAAPGTYTVTLTVTDDSGASN 76
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4864-5266 |
9.06e-19 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 96.65 E-value: 9.06e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4864 GQSVRFR----------AFAFDPDNPGF-----------VPQDRNADGQLTILEGSDPSVI-YTVSDLPVGATFDPI--T 4919
Cdd:NF038112 1139 GKTVRFRfrigsdvavgAYGWDLDDLKFtgitntpftslVAEPGVCNRRPVANAGPDQTVLeRTTVTLNGSGSFDPDgdP 1218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4920 AMFVWT----PGYT--SAGTYNVTFTATD--------------DGNGTGITKatslTVPISVLNSNRAPEINEFSNITLN 4979
Cdd:NF038112 1219 LTYAWTqvsgPAVTltGADTATPSFTAPEvtadtvltfqlvvsDGTKTSAPD----TVTVLVRNVNRAPVAVAGAPATVD 1294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4980 RGEVKELVLQATDADGDPLVlQLKAESAGYGipdfVRFIDNGDRTATLrLAPGINDGGNYSFTLTATDNgngsanaIQSD 5059
Cdd:NF038112 1295 ERSTVTLDGSGTDADGDALT-YAWTQTSGPA----VTLTGATTATATF-TAPEVTADTQLTFTLTVSDG-------TASA 1361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5060 EYTFVVSVNTLNDPPILPFIGNKVAVVGETLEFIVKAGDRNQDNLSF---NLSGLPV---GA-TLTPTGIYGEAL----- 5127
Cdd:NF038112 1362 TDTVTVTVRNVNRAPVANAGADQTVDERSTVTLSGSATDPDGDALTYawtQTAGPTVtltGAdTATASFTAPEVAadtel 1441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5128 -FQWTPTAADINTYPVTIAVSdsgngnpnevfvsqqqfnliVRTANTTPVLAAIGNSSVAEGQTLNLVLSASDADGDTLT 5206
Cdd:NF038112 1442 tFQLTVSADGQASADVTVTVT--------------------VRNVNRAPVAHAGESITVDEGSTVTLDASATDPDGDTLT 1501
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 5207 YSATNL--PPGAVLDPVQGILTWTPNLSQAGTYNNITLTASDGNKSSSQSF-AITVNNTNQAP 5266
Cdd:NF038112 1502 YAWTQVagPSVTLTGADSAKLTFTAPEVSADTTLTFSLTVTDGSGSSGPVVvTVTVKNVNRAP 1564
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
8956-9214 |
1.50e-18 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 95.88 E-value: 1.50e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8956 PIANDDIATT-DQAKPVAINVLANDSTQGTVQLGAAPTNGSII-INNDRTLTYT---PNNTFVGTDTFTYIILDNNAiSN 9030
Cdd:NF038112 1283 PVAVAGAPATvDERSTVTLDGSGTDADGDALTYAWTQTSGPAVtLTGATTATATftaPEVTADTQLTFTLTVSDGTA-SA 1361
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9031 EATVTITVNNI--APTIDNITVESnITEGTTATFSAIATDP-GNDLTYTWNfgdgsnPVTGKQVNHTFADNGTYTAI--- 9104
Cdd:NF038112 1362 TDTVTVTVRNVnrAPVANAGADQT-VDERSTVTLSGSATDPdGDALTYAWT------QTAGPTVTLTGADTATASFTape 1434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9105 ----------LTVTDTAGASTVETLLLNVNNI--APIPKAGADITTDEGTAITFNGSFIDPGiKDTHTITWDFGDGT--T 9170
Cdd:NF038112 1435 vaadteltfqLTVSADGQASADVTVTVTVRNVnrAPVAHAGESITVDEGSTVTLDASATDPD-GDTLTYAWTQVAGPsvT 1513
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2711936800 9171 ATGILNPTHTY-----NQDGVYTATLTVTDNDGATNSNSLTVTVNNIDP 9214
Cdd:NF038112 1514 LTGADSAKLTFtapevSADTTLTFSLTVTDGSGSSGPVVVTVTVKNVNR 1562
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4961-5358 |
5.38e-18 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 93.95 E-value: 5.38e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4961 VLNSNRAPEINEFSNITLNrGEvkelvlQATDADGDPLVLQLKAESagyGIPdfVRFIDNGDRTATLrLAPGINDGGNYS 5040
Cdd:NF038112 1189 VANAGPDQTVLERTTVTLN-GS------GSFDPDGDPLTYAWTQVS---GPA--VTLTGADTATPSF-TAPEVTADTVLT 1255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5041 FTLTATDNGNGSANAiqsdeyTFVVSVNTLNDPPILPFIGNKVAVVGETLEFIVKAGDRNQDNLSF---NLSGLPVgaTL 5117
Cdd:NF038112 1256 FQLVVSDGTKTSAPD------TVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADGDALTYawtQTSGPAV--TL 1327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5118 TPTGIyGEALFQWTPTAADiNTYPVTIAVSDSGNGNPNEVFVSqqqfnliVRTANTTPVLAAIGNSSVAEGQTLNLVLSA 5197
Cdd:NF038112 1328 TGATT-ATATFTAPEVTAD-TQLTFTLTVSDGTASATDTVTVT-------VRNVNRAPVANAGADQTVDERSTVTLSGSA 1398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5198 SDADGDTLTYSATNLPPGAVldPVQGILTWTPNLS----QAGTYNNITLTAS-DGNKSSSQSFAITVNNTNQAPVLAPLP 5272
Cdd:NF038112 1399 TDPDGDALTYAWTQTAGPTV--TLTGADTATASFTapevAADTELTFQLTVSaDGQASADVTVTVTVRNVNRAPVAHAGE 1476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5273 IQTAQENNLIQFTLAAADIDNDSLIYSAV-----SALPTGAvlDPRTGKFTwKPNYEQAGEYVLKFAVKDTQNATSQSDV 5347
Cdd:NF038112 1477 SITVDEGSTVTLDASATDPDGDTLTYAWTqvagpSVTLTGA--DSAKLTFT-APEVSADTTLTFSLTVTDGSGSSGPVVV 1553
|
410
....*....|.
gi 2711936800 5348 TLRVANVNRSP 5358
Cdd:NF038112 1554 TVTVKNVNRAP 1564
|
|
| Calx-beta |
pfam03160 |
Calx-beta domain; |
9944-10025 |
1.99e-17 |
|
Calx-beta domain;
Pssm-ID: 397326 [Multi-domain] Cd Length: 91 Bit Score: 81.14 E-value: 1.99e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9944 TITESDngtTTAIFTVSLDAAS-GKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFL 10022
Cdd:pfam03160 12 QVSEND---GVAEVCVVRMSGTlRRTVVVPYRTEDGTATAGDDYEPVEGELVFGPGETEKCINVTIIDDDVYEGDENFFV 88
|
...
gi 2711936800 10023 NLS 10025
Cdd:pfam03160 89 LLS 91
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
9966-10137 |
4.00e-17 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 90.62 E-value: 4.00e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9966 GKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSD----------ATNATITDA 10035
Cdd:TIGR00845 430 TNTVYVDYRTEDGTANAGSDYEFTEGTLVFKPGETQKEFRIGIIDDDIFEEDEHFYVRLSNlrvgsedgilEANHVSAVA 509
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10036 Q------AVGTILDNDAPPVLTINDKTITEGDNGTTyMSFTVSLSVASAKPITVDYTTANGTAIAGS-DYKATSGTLSFA 10108
Cdd:TIGR00845 510 QlaspntATVTILDDDHAGIFTFEEDVFHVSESIGI-MEVKVLRTSGARGTVIVPYRTVEGTARGGGkDFEDTCGELEFE 588
|
170 180
....*....|....*....|....*....
gi 2711936800 10109 PGETSQTIIVEVIGDHNRGADETFAINLS 10137
Cdd:TIGR00845 589 NDETEKTIRVKIVDDEEYEKNDTFFIELG 617
|
|
| Calx-beta |
pfam03160 |
Calx-beta domain; |
9823-9913 |
7.95e-16 |
|
Calx-beta domain;
Pssm-ID: 397326 [Multi-domain] Cd Length: 91 Bit Score: 76.52 E-value: 7.95e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9823 PPTLSVNDisliegDDGNAyAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRID 9902
Cdd:pfam03160 8 PPTYQVSE------NDGVA-EVCVVRMSGTLRRTVVVPYRTEDGTATAGDDYEPVEGELVFGPGETEKCINVTIIDDDVY 80
|
90
....*....|.
gi 2711936800 9903 EYDETFFLNLS 9913
Cdd:pfam03160 81 EGDENFFVLLS 91
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9297-9380 |
8.06e-16 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 76.16 E-value: 8.06e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9297 NAAPIItNISGDTNINEGATANFTATATDPGNDSI-TYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAAT-QE 9374
Cdd:pfam18911 1 NAAPVA-DAGGDRIVAEGETVTFDASASDDPDGDIlSYRWDFGDGTTATGANVSHTYAAPGTYTVTLTVTDDSGASNsTA 79
|
....*.
gi 2711936800 9375 TLTVNV 9380
Cdd:pfam18911 80 TDTVTV 85
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
4525-4969 |
1.43e-14 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 82.78 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4525 VEFTpGIYALPYP---------NQAPIITSNPVLTAYTGQAYSYQVTAN-DPDGAVLGYLlYDAPSGMTIDQnTGLITWS 4594
Cdd:NF038112 1164 LKFT-GITNTPFTslvaepgvcNRRPVANAGPDQTVLERTTVTLNGSGSfDPDGDPLTYA-WTQVSGPAVTL-TGADTAT 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4595 PTQQSP-VSADVT----LQVYDLRGAHTTQSFSLNVVGGNHKPVFNTpvvsggiivsSSNGTVsgssatpitikgAEGKP 4669
Cdd:NF038112 1241 PSFTAPeVTADTVltfqLVVSDGTKTSAPDTVTVLVRNVNRAPVAVA----------GAPATV------------DERST 1298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4670 LQIQITATDADRNKLTY-WADNL-PNGAIFDSSSGILTWNPNYNAAGTYENVQFTVSDGVERVTQTATILIANINQAPTL 4747
Cdd:NF038112 1299 VTLDGSGTDADGDALTYaWTQTSgPAVTLTGATTATATFTAPEVTADTQLTFTLTVSDGTASATDTVTVTVRNVNRAPVA 1378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4748 IRPADTIVREGEKVRIQLQATDADIIAsippLSTSDFQLPTSLLTynsnlLPGGSTLDPRTGlfewTPAYFQAGEFEIPF 4827
Cdd:NF038112 1379 NAGADQTVDERSTVTLSGSATDPDGDA----LTYAWTQTAGPTVT-----LTGADTATASFT----APEVAADTELTFQL 1445
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4828 TVS-DGESVTTQTTKITVLNANAAPIFDNIGTWQVQEGQSVRFRAFAFDPDNpgfvpqdrnadGQLTI----LEGsdPSV 4902
Cdd:NF038112 1446 TVSaDGQASADVTVTVTVRNVNRAPVAHAGESITVDEGSTVTLDASATDPDG-----------DTLTYawtqVAG--PSV 1512
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 4903 IYTVSDLPVgATFdpitamfvwTPGYTSAGTyNVTFTAT-DDGNGTgitkATSLTVPISVLNSNRAPE 4969
Cdd:NF038112 1513 TLTGADSAK-LTF---------TAPEVSADT-TLTFSLTvTDGSGS----SGPVVVTVTVKNVNRAPD 1565
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
8983-9521 |
5.83e-14 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 80.21 E-value: 5.83e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8983 GTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIIldNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATF 9062
Cdd:COG4625 2 GGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGG--GGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9063 SAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGT 9142
Cdd:COG4625 80 GGGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGG 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9143 AITFNGSfIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGD 9222
Cdd:COG4625 160 AGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGG 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9223 TNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPII 9302
Cdd:COG4625 239 GGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9303 TNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSN 9382
Cdd:COG4625 319 GGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9383 VAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTL 9462
Cdd:COG4625 399 GGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTL 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 9463 TVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVN 9521
Cdd:COG4625 479 TGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYA 537
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
9619-9895 |
6.65e-14 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 80.51 E-value: 6.65e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9619 IYADNGIYNVTLTVRDNDGGVTIDtLTVTVNNVGPTitdisgdTNVD-EGTPAYFSATATDPGNDTL--------TYTWN 9689
Cdd:TIGR00864 946 IYQHAAVFKLSLTAMNHVSNLTED-FNVTVDRLNPM-------QGLQvKGVPAVLPPGATLALTAGVlidmaveaAFLWS 1017
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9690 FGDGTDA----------------------VVGQNVNHTFADNGIYTVTLTVSDEdGASTTKTLSTKVNNVAPTVAAG-DN 9746
Cdd:TIGR00864 1018 FGDGEQAlfefkppynesfpcpdpspaqvLLEHNVMHIYAAPGEYLATVLASNA-FENISQQINMSVRAILPRVAIGtED 1096
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9747 QIMYIGETVAFWGQ-FTDP-GILDThtvvWDFGDSNTVAGTLRPT--HIYNSNGTYSVTLTVtdddggvtNNTLTVTVKK 9822
Cdd:TIGR00864 1097 GLLLAGKPADFEAHpLPSPgGIHYE----WDFGDGSALLQGRQPAaaHTFAKRGPFHVCLEV--------NNTISGAAAC 1164
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 9823 PPTLSVNDISLIEGDDGNAYAVFTASLSEASLRT---VTANFATADGTAITGSDylATTGTITFNPGKTTQTITVA 9895
Cdd:TIGR00864 1165 ADMFAFEEIEGLSADMSLATELGAATTVRAALQSgdnITWTFDMGDGKSLSGPE--ATVEHKYAKAGNCTVNIGAA 1238
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
9211-9295 |
1.01e-13 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 70.38 E-value: 1.01e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9211 NIDPIInDISGDTNINEGATAKFTATATNPSN-DTLTYTWNFGDDTdPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSE 9289
Cdd:pfam18911 1 NAAPVA-DAGGDRIVAEGETVTFDASASDDPDgDILSYRWDFGDGT-TATGANVSHTYAAPGTYTVTLTVTDDSGASNST 78
|
....*..
gi 2711936800 9290 -TLTVSV 9295
Cdd:pfam18911 79 aTDTVTV 85
|
|
| Calx-beta |
pfam03160 |
Calx-beta domain; |
10056-10137 |
6.28e-13 |
|
Calx-beta domain;
Pssm-ID: 397326 [Multi-domain] Cd Length: 91 Bit Score: 68.43 E-value: 6.28e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10056 TITEGDngtTYMSFTVSLSVASA-KPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAI 10134
Cdd:pfam03160 12 QVSEND---GVAEVCVVRMSGTLrRTVVVPYRTEDGTATAGDDYEPVEGELVFGPGETEKCINVTIIDDDVYEGDENFFV 88
|
...
gi 2711936800 10135 NLS 10137
Cdd:pfam03160 89 LLS 91
|
|
| Calx_beta |
smart00237 |
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin ... |
9944-10025 |
3.03e-12 |
|
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
Pssm-ID: 197594 [Multi-domain] Cd Length: 90 Bit Score: 66.12 E-value: 3.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9944 TITESDngtTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLN 10023
Cdd:smart00237 12 TVSESD---GEVEVCVVRTGGARGPVVVPYSTEDGTATAGSDYEPVPGELTFPPGETEKEIRIKIIDDDIYEKDETFYVR 88
|
..
gi 2711936800 10024 LS 10025
Cdd:smart00237 89 LS 90
|
|
| YncE |
COG3391 |
DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
6782-6980 |
3.53e-12 |
|
DNA-binding beta-propeller fold protein YncE [General function prediction only];
Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 70.49 E-value: 3.53e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6782 YFGTEPSSYQIVKYDSNPIHLSANNGYVLAAQPFSDRVAVLQgtnpeavveatSSNDLVVARIPVGTDdvvdrPRDIAFT 6861
Cdd:COG3391 55 ALLAGLGLGAAAVADADGADAGADGRRLYVANSGSGRVSVID-----------LATGKVVATIPVGGG-----PRGLAVD 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6862 RDGSRAYVTLENSGRIALVDPLFLQQIDTkpeteeidtikLPTAASPRAIVVDNQDQYAYIADGRLG----IIYVLDINP 6937
Cdd:COG3391 119 PDGGRLYVADSGNGRVSVIDTATGKVVAT-----------IPVGAGPHGIAVDPDGKRLYVANSGSNtvsvIVSVIDTAT 187
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2711936800 6938 NsktyhQVIQNIQINGAPLGLRelvVSTDGRKLFATAPASGTA 6980
Cdd:COG3391 188 G-----KVVATIPVGGGPVGVA---VSPDGRRLYVANRGSNTS 222
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9025-9573 |
6.52e-12 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 73.66 E-value: 6.52e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9025 NNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAI 9104
Cdd:COG4625 5 GGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGG 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9105 LTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQD 9184
Cdd:COG4625 85 GGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9185 GVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVN 9264
Cdd:COG4625 165 GGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9265 HIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKT 9344
Cdd:COG4625 245 GGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9345 GENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGD 9424
Cdd:COG4625 325 GGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGG 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9425 GTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATfsaiATDPGNDTLTY 9504
Cdd:COG4625 405 AGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGS----GSGAGTLTLTG 480
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 9505 TWDFGDGTDAVIGSNVNhiFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAV 9573
Cdd:COG4625 481 NNTYTGTTTVNGGGNYT--QSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTYTILAV 547
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9661-9730 |
2.86e-11 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 63.24 E-value: 2.86e-11
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9661 DTNVDEGTPAYFSATATDPGNDTlTYTWNFGDGTDAVvGQNVNHTFADNGIYTVTLTVSDEDG-ASTTKTL 9730
Cdd:smart00089 8 PTVGVAGESVTFTATSSDDGSIV-SYTWDFGDGTSST-GPTVTHTYTKPGTYTVTLTVTNAVGsASATVTV 76
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9196-9750 |
3.27e-11 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 71.35 E-value: 3.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9196 NDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTV 9275
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9276 TLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADE 9355
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9356 GTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPN 9435
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9436 HVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAV 9515
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9516 IGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFG 9595
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9596 DGTTLeytphaptpphspLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSAT 9675
Cdd:COG4625 401 GGGGA-------------GGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGG 467
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 9676 ATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMY 9750
Cdd:COG4625 468 GSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVEVDAANSDRLVVTGTATLNGGTVVVLAGGYAPGTTY 542
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9655-9734 |
4.17e-11 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 62.90 E-value: 4.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9655 ITDISGDTNVDEGTPAYFSATATDPGNDTlTYTWNFGDG-TDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTK 9733
Cdd:cd00146 2 TASVSAPPVAELGASVTFSASDSSGGSIV-SYKWDFGDGeVSSSGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVV 80
|
.
gi 2711936800 9734 V 9734
Cdd:cd00146 81 V 81
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9739-9820 |
6.52e-11 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 62.13 E-value: 6.52e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9739 PTVAAGDNQIMYIGETVAFwgQFTDPGILDTHTVVWDFGDSNTVAGTLR-PTHIYNSNGTYSVTLTVTDDDGGVTNNTLT 9817
Cdd:cd00146 1 PTASVSAPPVAELGASVTF--SASDSSGGSIVSYKWDFGDGEVSSSGEPtVTHTYTKPGTYTVTLTVTNAVGSSSTKTTT 78
|
...
gi 2711936800 9818 VTV 9820
Cdd:cd00146 79 VVV 81
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9485-9547 |
6.81e-11 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 62.08 E-value: 6.81e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 9485 GATATFSAIATDPGNDTlTYTWDFGDGTDAViGSNVNHIFADNGNYTVTLTVQDPDGAATQQT 9547
Cdd:smart00089 14 GESVTFTATSSDDGSIV-SYTWDFGDGTSST-GPTVTHTYTKPGTYTVTLTVTNAVGSASATV 74
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9052-9115 |
1.08e-10 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 61.70 E-value: 1.08e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 9052 SNITEGTTATFSAIATDPGNDLTYTWNFGDGSnPVTGKQVNHTFADNGTYTAILTVTDTAGAST 9115
Cdd:smart00089 9 TVGVAGESVTFTATSSDDGSIVSYTWDFGDGT-SSTGPTVTHTYTKPGTYTVTLTVTNAVGSAS 71
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
8956-9026 |
1.17e-10 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 61.97 E-value: 1.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8956 PIANDDIATTDqakpvAINVLANDS---------TQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNN 9026
Cdd:pfam17963 15 PVAVDDSVTVT-----EDTVLANDSdpdgdpltiTSLTVTIVTAPANGTVTVNADGTLTYTPNAGFSGTDSFTYTVSDGS 89
|
|
| caca |
TIGR00845 |
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of ... |
10083-10164 |
1.59e-10 |
|
sodium/calcium exchanger 1; The Ca2+:Cation Antiporter (CaCA) Family (TC 2.A.19)Proteins of the CaCA family are found ubiquitously, having been identified in animals, plants, yeast, archaea and widely divergent bacteria.All of the characterized animal proteins catalyze Ca2+:Na+ exchange although some also transport K+. The NCX1 plasma membrane protein exchanges 3 Na+ for 1 Ca2+. The E. coli ChaA protein catalyzes Ca2+:H+ antiport but may also catalyze Na+:H+ antiport. All remaining well-characterized members of the family catalyze Ca2+:H+ exchange.This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family [Transport and binding proteins, Other]
Pssm-ID: 273296 [Multi-domain] Cd Length: 928 Bit Score: 69.05 E-value: 1.59e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10083 VDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAINLSN----------ATNAAIADAQ---- 10148
Cdd:TIGR00845 435 VDYRTEDGTANAGSDYEFTEGTLVFKPGETQKEFRIGIIDDDIFEEDEHFYVRLSNlrvgsedgilEANHVSAVAQlasp 514
|
90
....*....|....*...
gi 2711936800 10149 --GTGTIVDDDRTDGFAI 10164
Cdd:TIGR00845 515 ntATVTILDDDHAGIFTF 532
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9667-9727 |
1.89e-10 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 60.48 E-value: 1.89e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 9667 GTPAYFSATATDPGNdtLTYTWNFGDGTDAV-VGQNVNHTFADNGIYTVTLTVSDEDGASTT 9727
Cdd:pfam00801 11 GQPVTFTATLADGSN--VTYTWDFGDSPGTSgSGPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9476-9545 |
1.95e-10 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 60.48 E-value: 1.95e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9476 VAGDINIEEGATATFSAIATDPGNdtLTYTWDFGDGTDAV-IGSNVNHIFADNGNYTVTLTVQDPDGAATQ 9545
Cdd:pfam00801 2 SASGTVVAAGQPVTFTATLADGSN--VTYTWDFGDSPGTSgSGPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9057-9123 |
2.08e-10 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 60.97 E-value: 2.08e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9057 GTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQ-VNHTFADNGTYTAILTVTDTAGASTVETLLLNV 9123
Cdd:cd00146 14 GASVTFSASDSSGGSIVSYKWDFGDGEVSSSGEPtVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVVV 81
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
9014-9458 |
2.16e-10 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 68.43 E-value: 2.16e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9014 GTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNH 9093
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9094 TFADNGTYTAILTVTDTAGASTVETLLLNVNNIApipkaGADITTDEGTAITFNGSFIDPGIKDTHTitwdfGDGTTATG 9173
Cdd:COG3468 81 SGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGG-----GGGGGGGGGGTGGGGGGGTGSAGGGGGG-----GGGGTGVG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9174 ILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGD 9253
Cdd:COG3468 151 GTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGS 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9254 DTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITY 9333
Cdd:COG3468 231 GGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGG 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9334 TwdfGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTT-DEGTAITFNGNFTDPGI 9412
Cdd:COG3468 311 G---NGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGgGGSGGGGGAGGGGANTG 387
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2711936800 9413 LDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGEN 9458
Cdd:COG3468 388 SDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNN 433
|
|
| Calx_beta |
smart00237 |
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin ... |
10056-10137 |
2.91e-10 |
|
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
Pssm-ID: 197594 [Multi-domain] Cd Length: 90 Bit Score: 60.73 E-value: 2.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10056 TITEGDngtTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAIN 10135
Cdd:smart00237 12 TVSESD---GEVEVCVVRTGGARGPVVVPYSTEDGTATAGSDYEPVPGELTFPPGETEKEIRIKIIDDDIYEKDETFYVR 88
|
..
gi 2711936800 10136 LS 10137
Cdd:smart00237 89 LS 90
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9050-9586 |
3.07e-10 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 68.27 E-value: 3.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9050 VESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPI 9129
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9130 PKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTV 9209
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9210 NNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSE 9289
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9290 TLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVshefADEGTYNVTLTVQDSDG 9369
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGG----GGGGGGGGGGGGGGGGG 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9370 AATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLT 9449
Cdd:COG4625 317 GGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9450 VKDNDGGENSDTLTVSVNNVAPTITNVAGDINIeegATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGN 9529
Cdd:COG4625 397 GGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGA---GGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGA 473
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 9530 YTVTLTVQDPDGAATQqtltlsvsnvapiVNAGADFTTDEGSAVTFNGNFTDPGILD 9586
Cdd:COG4625 474 GTLTLTGNNTYTGTTT-------------VNGGGNYTQSAGSTLAVEVDAANSDRLV 517
|
|
| YncE |
COG3391 |
DNA-binding beta-propeller fold protein YncE [General function prediction only]; |
6809-7042 |
4.36e-10 |
|
DNA-binding beta-propeller fold protein YncE [General function prediction only];
Pssm-ID: 442618 [Multi-domain] Cd Length: 237 Bit Score: 64.33 E-value: 4.36e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6809 VLAAQPFSDRVAVLQGTNPEAVVEATSSNDLVVARIPVGTDDVVDRPRDIAFTRDGSRAYVTLENSGRIALVDPLFLQQI 6888
Cdd:COG3391 24 AVAALGLGGGGPLLAAASGGVVGAAVGGGGVALLAGLGLGAAAVADADGADAGADGRRLYVANSGSGRVSVIDLATGKVV 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6889 DTkpeteeidtikLPTAASPRAIVVDNQDQYAYIADGRLGIIYVLDINPNsktyhQVIQNIQINGAPLGlreLVVSTDGR 6968
Cdd:COG3391 104 AT-----------IPVGGGPRGLAVDPDGGRLYVADSGNGRVSVIDTATG-----KVVATIPVGAGPHG---IAVDPDGK 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 6969 KLFATAPASGTAkSKIVVVnIDPEDkpeyyqnnlrrwHEQVAAIDV-EGAEGLSTTADPRFLTFTNRKSDATGYG 7042
Cdd:COG3391 165 RLYVANSGSNTV-SVIVSV-IDTAT------------GKVVATIPVgGGPVGVAVSPDGRRLYVANRGSNTSNGG 225
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
8974-9050 |
4.62e-10 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 60.34 E-value: 4.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8974 NVLANDS------TQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNI--APTI 9045
Cdd:NF012211 14 QLLANASdvdgddLTVSNVSYSGPTNGTVTDNGDGTYTYTPNENFNGDDSFTYTVSDGTGATATATVFVTVNPVndAPVA 93
|
....*
gi 2711936800 9046 DNITV 9050
Cdd:NF012211 94 GNDAF 98
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9325-9380 |
5.17e-10 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 59.82 E-value: 5.17e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9325 DPGNDSITYTWDFGNGITKTGE--NVSHEFADEGTYNVTLTVQDSDGAATQETLTVNV 9380
Cdd:cd00146 24 SSGGSIVSYKWDFGDGEVSSSGepTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVVV 81
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9331-9380 |
6.01e-10 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 59.39 E-value: 6.01e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9331 ITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQeTLTVNV 9380
Cdd:smart00089 30 VSYTWDFGDGTSSTGPTVTHTYTKPGTYTVTLTVTNAVGSASA-TVTVVV 78
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5263-5451 |
6.01e-10 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 67.37 E-value: 6.01e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5263 NQAPVLAPLPIQTAQENNLIQFT-LAAADIDNDSLIYS--AVSALP---TGAvlDPRTGKFTwKPNYEQAGEYVLKFAVK 5336
Cdd:NF038112 1185 NRRPVANAGPDQTVLERTTVTLNgSGSFDPDGDPLTYAwtQVSGPAvtlTGA--DTATPSFT-APEVTADTVLTFQLVVS 1261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5337 DTQNATSQSDVTLRVANVNRSPVISVS-PHAVALGEKLQFQVVGTDPDNNTnLTFSAANLPDEAV-LDAATGMFSWMPSP 5414
Cdd:NF038112 1262 DGTKTSAPDTVTVLVRNVNRAPVAVAGaPATVDERSTVTLDGSGTDADGDA-LTYAWTQTSGPAVtLTGATTATATFTAP 1340
|
170 180 190
....*....|....*....|....*....|....*....
gi 2711936800 5415 GQVGDYAVTY--AVSDGETTVTQTSTVRVAIAPTPPIVN 5451
Cdd:NF038112 1341 EVTADTQLTFtlTVSDGTASATDTVTVTVRNVNRAPVAN 1379
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9483-9552 |
6.34e-10 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 59.43 E-value: 6.34e-10
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9483 EEGATATFSAIATDPGNDTlTYTWDFGDG-TDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSV 9552
Cdd:cd00146 12 ELGASVTFSASDSSGGSIV-SYKWDFGDGeVSSSGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVVV 81
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9130-9209 |
7.27e-10 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 59.43 E-value: 7.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9130 PKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTAT-GILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVT 9208
Cdd:cd00146 1 PTASVSAPPVAELGASVTFSASDSSGGSIVSYKWDFGDGEVSSsGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVV 80
|
.
gi 2711936800 9209 V 9209
Cdd:cd00146 81 V 81
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9149-9467 |
7.68e-10 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 65.08 E-value: 7.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9149 SFIDPGIKDTHTITWDFGDGTTATGIlNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEG 9228
Cdd:COG3291 15 QFTDTSSGNATSYEWDFGDGTTSTEA-NPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTVTTL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9229 ATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGD 9308
Cdd:COG3291 94 ANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTTDVTSDGTTSAS 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9309 TNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVD 9388
Cdd:COG3291 174 TNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNTVTT 253
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 9389 AGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVN 9467
Cdd:COG3291 254 SGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTTGSSSTGTV 332
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9635-10175 |
1.20e-09 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 66.34 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9635 NDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTV 9714
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9715 TLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNS 9794
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9795 NGTYSVTLTVTDDDGGVTNNTLTVTVkkpptlSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDY 9874
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGG------GGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGG 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9875 LATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITDKTITESDNGTTT 9954
Cdd:COG4625 235 GGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9955 AIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATITD 10034
Cdd:COG4625 315 GGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGG 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10035 AQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQ 10114
Cdd:COG4625 395 GAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAG 474
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 10115 TIIvevIGDHNRGADETFAINLSNATNAAiadaqGTGTIVDDDRTDGFAIRAEGTVTINGS 10175
Cdd:COG4625 475 TLT---LTGNNTYTGTTTVNGGGNYTQSA-----GSTLAVEVDAANSDRLVVTGTATLNGG 527
|
|
| PCC |
TIGR00864 |
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) ... |
8953-9618 |
2.52e-09 |
|
polycystin cation channel protein; The Polycystin Cation Channel (PCC) Family (TC 1.A.5) Polycystin is a huge protein of 4303aas. Its repeated leucine-rich (LRR) segment is found in many proteins. It contains 16 polycystic kidney disease (PKD) domains, one LDL-receptor class A domain, one C-type lectin family domain, and 16-18 putative TMSs in positions between residues 2200 and 4100. Polycystin-L has been shown to be a cation (Na+, K+ and Ca2+) channel that is activated by Ca2+. Two members of the PCC family (polycystin 1 and 2) are mutated in autosomal dominant polycystic kidney disease, and polycystin-L is deleted in mice with renal and retinal defects. Note: this model is restricted to the amino half.
Pssm-ID: 188093 [Multi-domain] Cd Length: 2740 Bit Score: 65.49 E-value: 2.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8953 LITPIANDDI-ATTDQA-----KPVAINVLANDSTQGT-VQLG--------AAPTNGSIIIN-NDRTLTYTPN--NTFVG 9014
Cdd:TIGR00864 1403 LVTVAASNNIsAANDSAlievlEPVGATSFKHNGSHGNnLELGqpylfsafGRARNASYLWDfGDGGLLEGPEilHAFNS 1482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9015 TDTFTYIILDNNAIS-NEATVTITVNNiapTIDNITVESNITE---GTTATFSAiATDPGNDLTYTWNFGDGSNPV-TGK 9089
Cdd:TIGR00864 1483 PGDFNIRLAAANEVGkNEATLNVAVKA---RVRGLTINASLTNvplNGSVHFEA-HLDAGDDVRFSWILCDHCTPIfGGN 1558
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9090 QVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFID--------PGIKDTHTI 9161
Cdd:TIGR00864 1559 TIFYTFRSVGTFNIIVTAENDVGAAQASIFLFVLQEIEGLQILGETAEGGGGGVQELDGCYFEtnhtvqfhAGFKDGTNL 1638
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9162 TWDFG------------DGTTATGILNPThtynQDGVYTATLTVTDNDGATNSNSltvTVNNIDPIINDISGDTNINEGA 9229
Cdd:TIGR00864 1639 SFSWNaildnepdgpafAGSGKGAKLNPL----EAGPCDIFLQAANLLGQATADC---TIDFLEPAGNLMLAASDNPAAV 1711
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9230 TAKFTATATNPSNDTLTYTWNFGDDTDPVVGQT-VNHIFAQDGNYTVTLTVtdtSNGITSETLTVSVNNAAPI----ITN 9304
Cdd:TIGR00864 1712 NALINLSAELAEGSGLQYRWFLEEGDDLETSEPfMSHSFPSAGLHLVTMKA---FNELGSANASEEVDVQEPIsglkIRA 1788
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9305 I-SGDTNINEGATANFTATATDPGNDsITYTWDFGNGITKTGENVSHEFADEGTYNVTLtvqdsdgaatqetltvNVSNV 9383
Cdd:TIGR00864 1789 AdAGEQNFFAADSSVCFQGELATGTN-VSWCWAIDGGSSKMGKHACMTFPDAGTFAIRL----------------NASNA 1851
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9384 APIVDAGADLTTDE---GTAITFNGNFTDPGILDTHTITWDFGDGTT--------AEGTLTPN----HVFFNNGVYSVKL 9448
Cdd:TIGR00864 1852 VSGKSASREFFAEEpifGLELKASKKIAAIGEKVEFQILLAAGSAVNfrlqiggaAPEVLQPGprfsHSFPRVDDHMVNL 1931
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9449 TVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDpgNDTLTYTWDF------GDGTDAVIGSNVNH 9522
Cdd:TIGR00864 1932 RAKNEVSCAQANLHIEVLEAVRGLQIPDCCAAGIATGEEKNFTANVQR--GKPVAFAWTFdlhhlhGDSLVIHMGKDVSY 2009
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9523 IFADNGNYTVTLTVQDPDGAaTQQTLTLSVSNVA--PIVNAGADFTTDEGSaVTFNGNFT-DPGILDTHtiiWDFGDGTT 9599
Cdd:TIGR00864 2010 TAEAAGLLEIQLGAFNALGA-ENITLQLEAQDALmdAALQAGPQDCFTNKM-AQFEAATSpKPNFMACH---WDFGDGSA 2084
|
730
....*....|....*....
gi 2711936800 9600 LEYTpHAPTPPHSPLTPTH 9618
Cdd:TIGR00864 2085 GQDT-DEPRAEHEYLHPGD 2102
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9160-9210 |
2.76e-09 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 57.46 E-value: 2.76e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9160 TITWDFGDGTTATGiLNPTHTYNQDGVYTATLTVTDNDGatnSNSLTVTVN 9210
Cdd:smart00089 31 SYTWDFGDGTSSTG-PTVTHTYTKPGTYTVTLTVTNAVG---SASATVTVV 77
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
9102-9536 |
2.87e-09 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 64.97 E-value: 2.87e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9102 TAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGIlnpthTY 9181
Cdd:COG3468 2 ASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGG-----GL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9182 NQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQ 9261
Cdd:COG3468 77 AGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9262 TVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTwdfGNGI 9341
Cdd:COG3468 157 AGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAG---SGGN 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9342 TKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWD 9421
Cdd:COG3468 234 TGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNG 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9422 FGDGTTAEGTLTpnhVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDT 9501
Cdd:COG3468 314 GGGGGGSNAGGG---SGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDG 390
|
410 420 430
....*....|....*....|....*....|....*
gi 2711936800 9502 LTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTV 9536
Cdd:COG3468 391 VGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTV 425
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9057-9115 |
3.45e-09 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 57.01 E-value: 3.45e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9057 GTTATFSAIATDpGNDLTYTWNFGDGSNPVT-GKQVNHTFADNGTYTAILTVTDTAGAST 9115
Cdd:pfam00801 11 GQPVTFTATLAD-GSNVTYTWDFGDSPGTSGsGPTVTHTYLSPGTYTVTLTASNAVGSAN 69
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9752-9821 |
4.08e-09 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 57.08 E-value: 4.08e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9752 GETVAFWGQFTDPGilDTHTVVWDFGDSNTVAGTlRPTHIYNSNGTYSVTLTVTDDDGgvtNNTLTVTVK 9821
Cdd:smart00089 14 GESVTFTATSSDDG--SIVSYTWDFGDGTSSTGP-TVTHTYTKPGTYTVTLTVTNAVG---SASATVTVV 77
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
8970-9379 |
4.64e-09 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 64.20 E-value: 4.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8970 PVAINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNIT 9049
Cdd:COG3468 3 SGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSG 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9050 VESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPI 9129
Cdd:COG3468 83 GTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTG 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9130 PKAGADITTDE------GTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSN 9203
Cdd:COG3468 163 SGGGGSGGGGGagggggGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGG 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9204 SLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTS 9283
Cdd:COG3468 243 GSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNA 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9284 NGITSETLTVSVNNAAPIIT----NISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYN 9359
Cdd:COG3468 323 GGGSGGGGGGGGGGGGGGTTlngaGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGN 402
|
410 420
....*....|....*....|....
gi 2711936800 9360 VTLTVQDSDGAATQ----ETLTVN 9379
Cdd:COG3468 403 NGGGGVGGGGGGGLtltgGTLTVN 426
|
|
| Calx_beta |
smart00237 |
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin ... |
9856-9913 |
5.06e-09 |
|
Domains in Na-Ca exchangers and integrin-beta4; Domain in Na-Ca exchangers and integrin subunit beta4 (and some cyanobacterial proteins)
Pssm-ID: 197594 [Multi-domain] Cd Length: 90 Bit Score: 57.26 E-value: 5.06e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2711936800 9856 TVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLS 9913
Cdd:smart00237 33 PVVVPYSTEDGTATAGSDYEPVPGELTFPPGETEKEIRIKIIDDDIYEKDETFYVRLS 90
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9752-9812 |
5.80e-09 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 56.24 E-value: 5.80e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 9752 GETVAFWGQFTDPGILdthTVVWDFGDSNTVAGT-LRPTHIYNSNGTYSVTLTVTDDDGGVT 9812
Cdd:pfam00801 11 GQPVTFTATLADGSNV---TYTWDFGDSPGTSGSgPTVTHTYLSPGTYTVTLTASNAVGSAN 69
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
9516-10175 |
9.41e-09 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 63.25 E-value: 9.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9516 IGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFG 9595
Cdd:COG5295 1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9596 DGTTLEYTPHAPTpphspltpthiyADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSAT 9675
Cdd:COG5295 81 SSVASGGASAATA------------ASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9676 ATDPGNDTLTYTwnFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETV 9755
Cdd:COG5295 149 SAAGGSNTATAT--GSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAG 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9756 AFWGQFTDPGIlDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIE 9835
Cdd:COG5295 227 AATGSAASAGG-SASAGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAAN 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9836 GDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDeYDETFFLNLSDA 9915
Cdd:COG5295 306 ATAGGGNAGSGGGGAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAA-ATSSSGGSATAA 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9916 TNATIADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSF 9995
Cdd:COG5295 385 GNAAGAAGAGSAGSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAAN 464
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9996 APGETTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSV 10075
Cdd:COG5295 465 VGAATTAASAAATAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGG 544
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10076 ASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAINLSNAtNAAIADAQGTGTIVD 10155
Cdd:COG5295 545 GSTTAATGTNSVAVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGA-VATGDNSVAVGNNAQ 623
|
650 660
....*....|....*....|
gi 2711936800 10156 DDRTDGFAIRAEGTVTINGS 10175
Cdd:COG5295 624 ASGANSVALGAGATATANNS 643
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
9452-10217 |
1.22e-08 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 62.85 E-value: 1.22e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9452 DNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYT 9531
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9532 VTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPH 9611
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9612 SPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFG 9691
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9692 DGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHT 9771
Cdd:COG3209 241 SATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9772 VVWDFGDSNTVAGTL----RPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTA 9847
Cdd:COG3209 321 TGTAAVSGAADAGTTtttgTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSST 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9848 SLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVA 9927
Cdd:COG3209 401 TGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9928 TILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQ 10007
Cdd:COG3209 481 TGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTST 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10008 LNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTT 10087
Cdd:COG3209 561 GTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGST 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10088 ANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAE 10167
Cdd:COG3209 641 TGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLG 720
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10168 GTVTINGSGDFDGNPLDLYDDTLIYAAKGFNINGNPVLPVKRDAQGNPIR 10217
Cdd:COG3209 721 TTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTS 770
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9481-9810 |
1.58e-08 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 61.22 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9481 NIEEGATATFSAIATdpgNDTLTYTWDFGDGTDAViGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVN 9560
Cdd:COG3291 7 SGCAPLTVQFTDTSS---GNATSYEWDFGDGTTST-EANPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9561 AGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVT 9640
Cdd:COG3291 83 TVTTSTTVTTLANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9641 IDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSD 9720
Cdd:COG3291 163 DVTSDGTTSASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9721 EDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSV 9800
Cdd:COG3291 243 AGTPGTNTVTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTND 322
|
330
....*....|
gi 2711936800 9801 TLTVTDDDGG 9810
Cdd:COG3291 323 TTGSSSTGTV 332
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9328-9640 |
1.80e-08 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 60.84 E-value: 1.80e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9328 NDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNF 9407
Cdd:COG3291 22 GNATSYEWDFGDGTTSTEANPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTVTTLANTANGGA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9408 TDPGilDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGAT 9487
Cdd:COG3291 102 TTVV--AGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTTDVTSDGTTSASTNPSVT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9488 ATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTT 9567
Cdd:COG3291 180 TDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNTVTTSGANTA 259
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 9568 DEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVT 9640
Cdd:COG3291 260 GTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTTGSSSTGTV 332
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
8950-9690 |
1.83e-08 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 62.47 E-value: 1.83e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8950 DDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAIS 9029
Cdd:COG3209 23 AGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAAAGGG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9030 NEATVTiTVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTD 9109
Cdd:COG3209 103 ATLTGL-AAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAGGGASAYGLTLGGAAAGPA 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9110 TAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTA 9189
Cdd:COG3209 182 TGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATTLGG 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9190 TLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQ 9269
Cdd:COG3209 262 TTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTTGTG 341
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9270 DGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVS 9349
Cdd:COG3209 342 TGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGGPAT 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9350 HEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTH--TITWDFGDGTT 9427
Cdd:COG3209 422 AAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSgsAGATTLGTDTT 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9428 AEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWD 9507
Cdd:COG3209 502 LDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGASTT 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9508 FGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDT 9587
Cdd:COG3209 582 TGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTRATG 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9588 HTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEG 9667
Cdd:COG3209 662 TTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTGGTT 741
|
730 740
....*....|....*....|...
gi 2711936800 9668 TPAYFSATATDPGNDTLTYTWNF 9690
Cdd:COG3209 742 GTLTTTSTTTTTTAGALTYTYDA 764
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
8865-9285 |
2.14e-08 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 61.89 E-value: 2.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8865 LGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVKIDISSITPGTVATLYFDLLGFGAKDA-KIII 8943
Cdd:COG3468 25 GTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGgTGGG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8944 DNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIIL 9023
Cdd:COG3468 105 GGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGG 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9024 DNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTA 9103
Cdd:COG3468 185 SGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9104 ILTVTDTAGASTVETLLLNVNNIApipkAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNpthtynq 9183
Cdd:COG3468 265 GGGTGTGSGGGGGGGANGGGSGGG----GGASGTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGG------- 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9184 dgvyTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTV 9263
Cdd:COG3468 334 ----GGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVG 409
|
410 420
....*....|....*....|..
gi 2711936800 9264 NHIFAQDGNYTVTLTVTDTSNG 9285
Cdd:COG3468 410 GGGGGGLTLTGGTLTVNGNYTG 431
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9052-9381 |
2.36e-08 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 60.45 E-value: 2.36e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9052 SNITEGTTATFSAIATdpGNDLTYTWNFGDGSNPvTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPK 9131
Cdd:COG3291 6 TSGCAPLTVQFTDTSS--GNATSYEWDFGDGTTS-TEANPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVT 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9132 AGADITTDEGTAITFNGSFIDPGIKDTHT-ITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVN 9210
Cdd:COG3291 83 TVTTSTTVTTLANTANGGATTVVAGSTVGtGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9211 NIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSET 9290
Cdd:COG3291 163 DVTSDGTTSASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGD 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9291 LTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGA 9370
Cdd:COG3291 243 AGTPGTNTVTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTND 322
|
330
....*....|.
gi 2711936800 9371 ATQETLTVNVS 9381
Cdd:COG3291 323 TTGSSSTGTVF 333
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
9452-10476 |
2.78e-08 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 62.09 E-value: 2.78e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9452 DNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYT 9531
Cdd:COG3210 4 GLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGGIGA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9532 VTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTphaptpph 9611
Cdd:COG3210 84 AAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLST-------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9612 spltpthiyADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFG 9691
Cdd:COG3210 156 ---------SGAGNNTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANST 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9692 DGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNqimyIGETVAFWGQFTDPGILDTHT 9771
Cdd:COG3210 227 LTGGVVAAGTGAGVISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTN----ATGSNTAGASSGDTTTNGTSS 302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9772 VVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSE 9851
Cdd:COG3210 303 VTGAGGTGVLGGGTAAGITTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVAS 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9852 ASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILD 9931
Cdd:COG3210 383 TVGTATASTGNASSTTVLGSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSG 462
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9932 NDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGD 10011
Cdd:COG3210 463 NTDVSGTGTVTNSAGNTTSATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGS 542
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10012 ITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGT 10091
Cdd:COG3210 543 GLTTTVSGGASGTTAASGSNTANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSG 622
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10092 AIAGSDYKATSGTLSFAPGETSQTIIVEVIGdhnrGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVT 10171
Cdd:COG3210 623 AGANATGGGAGLTGSAVGAALSGTGSGTTGT----ASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGT 698
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10172 INGSGDfdgnpldlyddTLIYAAKGFNINGNPvlpvkRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLV 10251
Cdd:COG3210 699 LNNAGN-----------TLTISTGSITVTGQI-----GALANANGDTVTFGNLGTGATLTLNAGVTITSGNAGTLSIGLT 762
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10252 PPQIVEPQTIIVpaYASVKQQELERRIPTGATTLTFNMQQNPMNNAADwAKKFPPSGTASNPTVVRVTGGGLNIPANVSL 10331
Cdd:COG3210 763 ANTTASGTTLTL--ANANGNTSAGATLDNAGAEISIDITADGTITAAG-TTAINVTGSGGTITINTATTGLTGTGDTTSG 839
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10332 NNYVIIVEQGDINFNGSGHNLNNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITFNGAT 10411
Cdd:COG3210 840 AGGSNTTDTTTGTTSDGASGGGTAGANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTAT 919
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 10412 STVDESSNLQVISQGDLTYNGSANTRGTFLAAKNFTYNGNSTLFGSIDVKGNIIFNGQATVTAIG 10476
Cdd:COG3210 920 GTGGGGLTGGNAAAGGTGAGNGTTALSGTQGNAGLSAASASDGAGDTGASSAAGSSAVGTSANSA 984
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9557-9648 |
3.31e-08 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 54.42 E-value: 3.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9557 PIVNAGADFTTDEGSAVTFNgnFTDPGILDTHTIIWDFGDGTTLeyTPHAPTPphspltpTHIYADNGIYNVTLTVRDND 9636
Cdd:cd00146 1 PTASVSAPPVAELGASVTFS--ASDSSGGSIVSYKWDFGDGEVS--SSGEPTV-------THTYTKPGTYTVTLTVTNAV 69
|
90
....*....|..
gi 2711936800 9637 GGVTIDTLTVTV 9648
Cdd:cd00146 70 GSSSTKTTTVVV 81
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
8841-9340 |
3.42e-08 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 61.33 E-value: 3.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8841 GTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVKIDISSIT 8920
Cdd:COG4625 28 AGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGG 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8921 PGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINN 9000
Cdd:COG4625 108 GGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9001 DRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFG 9080
Cdd:COG4625 188 GGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGG 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9081 DGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHT 9160
Cdd:COG4625 268 GGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGG 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9161 ITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNP 9240
Cdd:COG4625 348 GGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGT 427
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9241 SNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFT 9320
Cdd:COG4625 428 GAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVNGGGNYTQSAGSTLAVE 507
|
490 500
....*....|....*....|
gi 2711936800 9321 ATATDPGNDSITYTWDFGNG 9340
Cdd:COG4625 508 VDAANSDRLVVTGTATLNGG 527
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9406-9726 |
3.46e-08 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 60.07 E-value: 3.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9406 NFTDPGILDTHTITWDFGDGTTAEGTlTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIeEG 9485
Cdd:COG3291 15 QFTDTSSGNATSYEWDFGDGTTSTEA-NPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTV-TT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9486 ATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADF 9565
Cdd:COG3291 93 LANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTTDVTSDGTTSA 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9566 TTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLT 9645
Cdd:COG3291 173 STNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNTVT 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9646 VTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGAS 9725
Cdd:COG3291 253 TSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTTGSSSTGTV 332
|
.
gi 2711936800 9726 T 9726
Cdd:COG3291 333 F 333
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
8866-9296 |
3.56e-08 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 61.12 E-value: 3.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8866 GTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVKIDISSITPGTVATLYFDLLGFGAKDAKIIIDN 8945
Cdd:COG3468 4 GGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8946 VMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDN 9025
Cdd:COG3468 84 TGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGS 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9026 NAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAIL 9105
Cdd:COG3468 164 GGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNTGGGVGGGGG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9106 TVTDTAGASTVETLLLNVNNIAPIpkAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTynqdG 9185
Cdd:COG3468 244 SAGGTGGGGLTGGGAAGTGGGGGG--TGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGG----G 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9186 VYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNH 9265
Cdd:COG3468 318 GGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVGTGLTT 397
|
410 420 430
....*....|....*....|....*....|.
gi 2711936800 9266 IFAQDGNYTVTLTVTDTSNGITSETLTVSVN 9296
Cdd:COG3468 398 GGTGNNGGGGVGGGGGGGLTLTGGTLTVNGN 428
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
3080-3188 |
4.37e-08 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 54.98 E-value: 4.37e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3080 ADLQVDEITIPSNAKSGESVQISWKVTNYGdNPASGQWSDAVYLSADAVWDIndrpigrvsYSGNLASGAEYTSTLTaiL 3159
Cdd:pfam07705 2 PDLIVQSISPPSEAYVGEENTITVTVKNQG-TAAAGAFNVALYVDGTSVGTI---------TVPGLAAGESTTVSFS--W 69
|
90 100
....*....|....*....|....*....
gi 2711936800 3160 PPATPGQYRIIVRPDIFNQVYEaENEANN 3188
Cdd:pfam07705 70 TPPTEGSYTLTVVVDPDNTVAE-SNETNN 97
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9240-9295 |
4.44e-08 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 54.04 E-value: 4.44e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 9240 PSNDTLTYTWNFGDD-TDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSV 9295
Cdd:cd00146 25 SGGSIVSYKWDFGDGeVSSSGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTTVVV 81
|
|
| FhaB |
COG3210 |
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, ... |
9515-10476 |
4.79e-08 |
|
Large exoprotein involved in heme utilization or adhesion [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442443 [Multi-domain] Cd Length: 1698 Bit Score: 61.32 E-value: 4.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9515 VIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDF 9594
Cdd:COG3210 1 GSGGLAGTTGNKTIGVDIAVTTTAATLGSNTAGTSGLNILGSGGVGTAGGIASNAGTTASTSGGSGTAGGVGNTSASTGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9595 GDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSA 9674
Cdd:COG3210 81 IGAAAANTAGTLETGLTSNIGGGSVNGSNSTGNGTLTTTAASATTGNNTGGTTTSSTNTVTTLGGTTTGNTVLSTSGAGN 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9675 TATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGET 9754
Cdd:COG3210 161 NTNTNNSSSGTNIGNSIPTTGGSLNVVAANPTGVTGVGGALINATAGVLANAGGGTAGGVASANSTLTGGVVAAGTGAGV 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9755 VAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLI 9834
Cdd:COG3210 241 ISTGGTDISSLSVAAGAGTGGAGGTGNAGNTTIGTTVTGTNATGSNTAGASSGDTTTNGTSSVTGAGGTGVLGGGTAAGI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9835 EGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSD 9914
Cdd:COG3210 321 TTTNTVGGNGDGNNTTANSGAGLVSGGTGGNNGTTGTGAGSGLTGTGNGGGLTTAGAGTVASTVGTATASTGNASSTTVL 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9915 ATNATIADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLS 9994
Cdd:COG3210 401 GSGSLATGNTGTTIAGNGGSANAGGFTTTGGVLGITGNGTVTGGTIGGLTGSGTTNGAGLSGNTDVSGTGTVTNSAGNTT 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9995 FAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLS 10074
Cdd:COG3210 481 SATTLAGGGIGTVTTNATISNNAGGDANGIATGLTGITAGGGGGGNATSGGTGGDGTTLSGSGLTTTVSGGASGTTAASG 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10075 VASakpiTVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIV 10154
Cdd:COG3210 561 SNT----ANTLGVLAATGGTSNATTAGNSTSATGGTGTNSGGTVLSIGTGSAGATGTITLGAGTSGAGANATGGGAGLTG 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10155 DDDRTDGFAIRAEGTVTINGSGDFDGNPLDLYDDTLIYAAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAP 10234
Cdd:COG3210 637 SAVGAALSGTGSGTTGTASANGSNTTGVNTAGGTGGGTTGTVTSGATGGTTGTTLNAATGGTLNNAGNTLTISTGSITVT 716
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10235 GYTVSNASNSNQYANLVppQIVEPQTIIVPAYASvkqqelerrIPTGATTLTFNMQQNPMNNAADWAKKFPPSGTASNPT 10314
Cdd:COG3210 717 GQIGALANANGDTVTFG--NLGTGATLTLNAGVT---------ITSGNAGTLSIGLTANTTASGTTLTLANANGNTSAGA 785
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10315 VVrvTGGGLNIPANVSLNNYVIIVEQGDINFNGSGHNLNNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNT 10394
Cdd:COG3210 786 TL--DNAGAEISIDITADGTITAAGTTAINVTGSGGTITINTATTGLTGTGDTTSGAGGSNTTDTTTGTTSDGASGGGTA 863
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10395 ILANGSSQGNITFNGATSTVDESSNLQVISQGDLTYNGSANTRGTFLAAKNFTYNGNSTLFGSIDVKGNIIFNGQATVTA 10474
Cdd:COG3210 864 GANSGSLAATAASITVGSGGVATSTGTANAGTLTNLGTTTNAASGNGAVLATVTATGTGGGGLTGGNAAAGGTGAGNGTT 943
|
..
gi 2711936800 10475 IG 10476
Cdd:COG3210 944 AL 945
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
9673-10107 |
7.17e-08 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 60.35 E-value: 7.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9673 SATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIG 9752
Cdd:COG3468 9 ATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9753 ETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDIS 9832
Cdd:COG3468 89 TGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGS 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9833 LIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGdrideYDETFFLNL 9912
Cdd:COG3468 169 GGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNT-----GGGVGGGGG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9913 SDATNATIADAQAVATILDNDappTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGT 9992
Cdd:COG3468 244 SAGGTGGGGLTGGGAAGTGGG---GGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGGGGGGGS 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9993 LSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGD---NGTTYMSF 10069
Cdd:COG3468 321 NAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDgvgTGLTTGGT 400
|
410 420 430
....*....|....*....|....*....|....*...
gi 2711936800 10070 TVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSF 10107
Cdd:COG3468 401 GNNGGGGVGGGGGGGLTLTGGTLTVNGNYTGNNGTLVL 438
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9674-10182 |
7.62e-08 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 60.18 E-value: 7.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9674 ATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGE 9753
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9754 TVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISL 9833
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9834 IEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLS 9913
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9914 DATNATIADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTL 9993
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9994 SFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSL 10073
Cdd:COG4625 321 GGGGGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10074 SVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGETSQTIIVEVIGdhnrGADETFAINLSNATNAAIADAQGTGTI 10153
Cdd:COG4625 401 GGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGG----GGGGGGAGGSGGGAGAGGGSGSGAGTL 476
|
490 500
....*....|....*....|....*....
gi 2711936800 10154 vdddrTDGFAIRAEGTVTINGSGDFDGNP 10182
Cdd:COG4625 477 -----TLTGNNTYTGTTTVNGGGNYTQSA 500
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
9636-10118 |
7.96e-08 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 60.44 E-value: 7.96e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9636 DGGVT-IDTLTVTVNNvGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYtwNFGDgtdAVVGQNVNHTF---ADNGI 9711
Cdd:NF038112 1081 DGGQTwVDIGDLDADP-GYTGTLYEGGGNPLEGRPAFVGTSAGFPAFISATL--NLGT---AFAGKTVRFRFrigSDVAV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9712 YTVTLTVSDEDGASTTKTLSTK------VNNVAPTVAAGDNQIMYIGETVAFWGQ-FTDP-GilDTHTVVWD--FGDSNT 9781
Cdd:NF038112 1155 GAYGWDLDDLKFTGITNTPFTSlvaepgVCNRRPVANAGPDQTVLERTTVTLNGSgSFDPdG--DPLTYAWTqvSGPAVT 1232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9782 VAG--TLRPTHI-----YNSNGTYsvTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASL 9854
Cdd:NF038112 1233 LTGadTATPSFTapevtADTVLTF--QLVVSDGTKTSAPDTVTVLVRNVNRAPVAVAGAPATVDERSTVTLDGSGTDADG 1310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9855 RTVTANFATADGTAITGSDylATTGTITFNPGKTTQTITVaingdrideydeTFFLNLSDATnATIADAQAVaTILDNDA 9934
Cdd:NF038112 1311 DALTYAWTQTSGPAVTLTG--ATTATATFTAPEVTADTQL------------TFTLTVSDGT-ASATDTVTV-TVRNVNR 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9935 PPTLT-ITDKTITESDNGTTTAiftvSLDAASGKPVTVNFATANGTAIAGSDytATSGTLSF-APgettktisvqlngDI 10012
Cdd:NF038112 1375 APVANaGADQTVDERSTVTLSG----SATDPDGDALTYAWTQTAGPTVTLTG--ADTATASFtAP-------------EV 1435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10013 TDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTtymsFTVSLSVASAKPITVDYTTANGTA 10092
Cdd:NF038112 1436 AADTELTFQLTVSADGQASADVTVTVTVRNVNRAPVAHAGESITVDEGSTVT----LDASATDPDGDTLTYAWTQVAGPS 1511
|
490 500
....*....|....*....|....*..
gi 2711936800 10093 IAGSDykATSGTLSF-APGETSQTIIV 10118
Cdd:NF038112 1512 VTLTG--ADSAKLTFtAPEVSADTTLT 1536
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
5901-6166 |
8.87e-08 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 60.44 E-value: 8.87e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5901 GEAISYSTTpQVSPVLADLGSAAQFTLKTTSGSLGESNRFTFSLRDSELRSTATGTVLLAVS-------VNAALNPAIPL 5973
Cdd:NF038112 1310 GDALTYAWT-QTSGPAVTLTGATTATATFTAPEVTADTQLTFTLTVSDGTASATDTVTVTVRnvnrapvANAGADQTVDE 1388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5974 ISGLTPIVSQSDADSAFALFAVSSAGLNLLQLGGAGSAYSLqlSVAGDVnrdglvdGVDSGLLRGAIAfgnydvtydfNR 6053
Cdd:NF038112 1389 RSTVTLSGSATDPDGDALTYAWTQTAGPTVTLTGADTATAS--FTAPEV-------AADTELTFQLTV----------SA 1449
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6054 DGVLNAAD-VQILGSNygfaANRAPVVTATSVLThTDLETSIALDKLATDAEGDRIFYRIINPVNGAVTFT-PDGHSARF 6131
Cdd:NF038112 1450 DGQASADVtVTVTVRN----VNRAPVAHAGESIT-VDEGSTVTLDASATDPDGDTLTYAWTQVAGPSVTLTgADSAKLTF 1524
|
250 260 270
....*....|....*....|....*....|....*.
gi 2711936800 6132 TPNAGYSGTA-SFEVVADDGYSSSAPALVTVNVSNA 6166
Cdd:NF038112 1525 TAPEVSADTTlTFSLTVTDGSGSSGPVVVTVTVKNV 1560
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9662-9992 |
9.27e-08 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 58.53 E-value: 9.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9662 TNVDEGTPAYFSATATdpgNDTLTYTWNFGDGTDAVvGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTV 9741
Cdd:COG3291 6 TSGCAPLTVQFTDTSS---GNATSYEWDFGDGTTST-EANPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGV 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9742 AAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVK 9821
Cdd:COG3291 82 TTVTTSTTVTTLANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVST 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9822 KPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRI 9901
Cdd:COG3291 162 TDVTSDGTTSASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTG 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9902 DEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAI 9981
Cdd:COG3291 242 DAGTPGTNTVTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTN 321
|
330
....*....|.
gi 2711936800 9982 AGSDYTATSGT 9992
Cdd:COG3291 322 DTTGSSSTGTV 332
|
|
| Dockerin_II |
cd14254 |
Type II dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein ... |
6020-6070 |
9.67e-08 |
|
Type II dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.
Pssm-ID: 271213 Cd Length: 54 Bit Score: 52.21 E-value: 9.67e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 6020 GDVNRDGLVDGVDSGLLR---GAIAFGNYDVTYDFNRDGVLNAADVQILGSNYG 6070
Cdd:cd14254 1 GDVNGDGVVDIADLALVSqhfGKTSDAGYVPAADLNGDGVIDAADLALLAQNFG 54
|
|
| YvrE |
COG3386 |
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase ... |
4078-4251 |
1.02e-07 |
|
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism]; Sugar lactone lactonase YvrE is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway
Pssm-ID: 442613 [Multi-domain] Cd Length: 266 Bit Score: 57.59 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4078 PLAITVLKDGSVLAsgGANRGSLYRF-LQTGA------PLNSGQNSPipfvtleypiFDMTVDGNGTLWATT-----GGG 4145
Cdd:COG3386 51 PNGLAFDPDGRLLV--ADHGRGLVRFdPADGEvtvladEYGKPLNRP----------NDGVVDPDGRLYFTDmgeylPTG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4146 PLLQLDTqTGKIVKQYGD-SITQALAIQPGTGLIYV--SSGKGIEIFnPINETFThYSDLRV-----------DSLAFDA 4211
Cdd:COG3386 119 ALYRVDP-DGSLRVLADGlTFPNGIAFSPDGRTLYVadTGAGRIYRF-DLDADGT-LGNRRVfadlpdgpggpDGLAVDA 195
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 2711936800 4212 DGKLWATTWPERGdIVRFNENGKPERMLEFDSP-VDSIAFG 4251
Cdd:COG3386 196 DGNLWVALWGGGG-VVRFDPDGELLGRIELPERrPTNVAFG 235
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
5096-5881 |
1.11e-07 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 59.77 E-value: 1.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5096 AGDRNQDNLSFNLSGLPVGATLTPTGIYGEALFQWTPTAADINTYPVTIAVSDSGNGNPNEVFVSQQQFNLIVRTANTTP 5175
Cdd:COG3209 19 AATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTALGDASAAGGGYVGGAA 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5176 VLAAIGNSSVAEGQTLNLVLSASDADGDTLTYSATNLPPGAVLDPVQGILTWTPNLSQAGTY------NNITLTASDGNK 5249
Cdd:COG3209 99 AGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGlagggaSAYGLTLGGAAA 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5250 SSSQSFAITVNNTNQAPVLAPLPIQTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVLDPRTGKFTWKPNYEQAGEY 5329
Cdd:COG3209 179 GPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTGSATGAAGAGAAVATAATT 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5330 VLKFAVKDTQNATSQSDVTLRVANVNRSPVISVSPHAVALGEKLQFQVVGTDPDNNTNLTFSAANLPDEAVLDAATGMFS 5409
Cdd:COG3209 259 LGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTGTAAVSGAADAGTTTTT 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5410 WMPSPGQVGDYAVTYAVSDGETTVTQTSTVRVAIAPTPPIVNFDLTPSFPAVPGQKVIVQTLASSLAAIANLSATIDGHT 5489
Cdd:COG3209 339 GTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTGVGAGTTTTSTTGGDGG 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5490 VLVDTQGRIEIIPTTPGRLVVDVTATDADGRVGHNSTVVKVRDPQDLAAPIVAFAPGLDGAKLTNVTNIIGSVSDVNLDN 5569
Cdd:COG3209 419 PATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTGGGTLTSGSAGATTLGT 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5570 WVLEIADFGEDVYRTLASGNGAVSDITLAQFDPGKLENGFYQLRLRATDISDRISSTQVIVEVNTATKPSAYTRTQTDLS 5649
Cdd:COG3209 499 DTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGA 578
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5650 ITFSSTLPDSLPHSLNLIRTYSSLNSDEVGSFGNGWQWATLDTNIQTNVPLTGRESLGVYEPFRVGTRLYLTTPSGERVG 5729
Cdd:COG3209 579 STTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTGGTTGTGVTTTGTTTTR 658
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5730 FTFAPQKHIIPGLTYYTPAWVADSGVNYKLESADATLTLAGNRLYDLKTGLAYNPGRGSYSDAEYTLTAVDGTVYHLSSA 5809
Cdd:COG3209 659 ATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTG 738
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5810 GGVTEEIAANGTRLVY-----------------SDSGITSSAGETVRFVKDSAGRLTQITAPDGSLVVYGYDTQGNLVSA 5872
Cdd:COG3209 739 GTTGTLTTTSTTTTTTagaltytydalgrltseTTPGGVTQGTYTTRYTYDALGRLTSVTYPDGETVTYTYDALGRLTSV 818
|
....*....
gi 2711936800 5873 RNLASGESS 5881
Cdd:COG3209 819 ITVGSGGGT 827
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9246-9295 |
1.28e-07 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 52.84 E-value: 1.28e-07
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9246 TYTWNFGDDTDpVVGQTVNHIFAQDGNYTVTLTVTDtSNGITSETLTVSV 9295
Cdd:smart00089 31 SYTWDFGDGTS-STGPTVTHTYTKPGTYTVTLTVTN-AVGSASATVTVVV 78
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
4540-4625 |
1.47e-07 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 53.24 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4540 APIITSNPVLTAYTGQAYSYQVTAN---DPDGAVLGYLLYDA-----PSGMTIDQNTGLITWSPTQQSPVSADVTLQVYD 4611
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSASggsDPYGGSTVTYSTTAtggalPSGLTLNSSTGTISGTPTSVQPGTYTFTVTATD 80
|
90
....*....|....
gi 2711936800 4612 LRGAHTTQSFSLNV 4625
Cdd:pfam05345 81 SSGLSSSTTFTLTV 94
|
|
| CADG |
smart00736 |
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan ... |
5179-5265 |
1.56e-07 |
|
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.
Pssm-ID: 214795 [Multi-domain] Cd Length: 97 Bit Score: 53.11 E-value: 1.56e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5179 AIGNSSVAEGQTLNLVLSAS---DADGDTLTYSAT-----NLPPGAVLDPVQGILTWTPNLSQAGTYnNITLTASD-GNK 5249
Cdd:smart00736 3 AIGDQTATEGESFSYTIPSStftDADGDTLTYSATlsdgsALPSWLSFDSDTGTLSGTPTNSDVGSL-SLKVTATDsSGA 81
|
90
....*....|....*.
gi 2711936800 5250 SSSQSFAITVNNTNQA 5265
Cdd:smart00736 82 SASDTFTITVVNTNDA 97
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
8956-9039 |
1.68e-07 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 52.96 E-value: 1.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8956 PIANDD--IATTDQAKPVAIN---VLANDS-----TQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDN 9025
Cdd:pfam17892 5 PVATGDvtLATGTEDTPLTITaaqLLANATdvdgdTLSVTNLTADAGHGTVVDNGDGTYTFTPAANYNGPVSFTYTVSDG 84
|
90
....*....|....
gi 2711936800 9026 NAISNEATVTITVN 9039
Cdd:pfam17892 85 HGGTTTATASLTVT 98
|
|
| COG3292 |
COG3292 |
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]; |
4080-4234 |
1.74e-07 |
|
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms];
Pssm-ID: 442521 [Multi-domain] Cd Length: 924 Bit Score: 59.23 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4080 AITVLKDGSVLAS--GGANRGSLYRFlqtgaPLNSGQNSPIPFVTL-EYPIFDMTVDGNGTLWATTGGGPLLQLDTQTGK 4156
Cdd:COG3292 271 SIAEDSDGNLWIRlwIGTYGGGLFRL-----DPKTGKFKRYNPNGLpSNSVYSILEDSDGNLWIGTSGGGLYRYDPKTGK 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4157 IVKQY------GDSITQALAIQPGTglIYVSSGKGIEIFNPINETFTHY---------SDLRVDSLAFDADGKLWATTwp 4221
Cdd:COG3292 346 FTKFSednglsNNFIRSILEDSDGN--LWVGTNGGLYRLDPKTGKFTNFthdpdknglSSNYINSIFEDSDGRLWIGT-- 421
|
170
....*....|...
gi 2711936800 4222 ERGDIVRFNENGK 4234
Cdd:COG3292 422 DGGGLYRYDPKTG 434
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9578-9894 |
1.80e-07 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 57.76 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9578 NFTDPGILDTHTIIWDFGDGTTLEYTphaptpphsplTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITD 9657
Cdd:COG3291 15 QFTDTSSGNATSYEWDFGDGTTSTEA-----------NPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTT 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9658 ISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNV 9737
Cdd:COG3291 84 VTTSTTVTTLANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTTD 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9738 APTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLT 9817
Cdd:COG3291 164 VTSDGTTSASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDA 243
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 9818 VTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITV 9894
Cdd:COG3291 244 GTPGTNTVTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTT 320
|
|
| Vgb |
COG4257 |
Streptogramin lyase [Defense mechanisms]; |
4128-4338 |
2.12e-07 |
|
Streptogramin lyase [Defense mechanisms];
Pssm-ID: 443399 [Multi-domain] Cd Length: 270 Bit Score: 56.95 E-value: 2.12e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4128 FDMTVDGNGTLWAT-TGGGPLLQLDTQTGKiVKQY---GDSITQALAIQPgTGLIYV--SSGKGIEIFNPINETFTHYSD 4201
Cdd:COG4257 20 RDVAVDPDGAVWFTdQGGGRIGRLDPATGE-FTEYplgGGSGPHGIAVDP-DGNLWFtdNGNNRIGRIDPKTGEITTFAL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4202 LRVDS----LAFDADGKLWATTwPERGDIVRFN-ENGKperMLEFDSPVDS-----IAFGKVGSrlagLLFVSNNNGDLQ 4271
Cdd:COG4257 98 PGGGSnphgIAFDPDGNLWFTD-QGGNRIGRLDpATGE---VTEFPLPTGGagpygIAVDPDGN----LWVTDFGANAIG 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 4272 MVDLAT--LQHIKVANGGSRGENIKTTDDGRILL--SQSQQIDIFSP----VIAPKVAATNPAPDAIVALPQGTI 4338
Cdd:COG4257 170 RIDPDTgtLTEYALPTPGAGPRGLAVDPDGNLWVadTGSGRIGRFDPktgtVTEYPLPGGGARPYGVAVDGDGRV 244
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9241-9545 |
2.46e-07 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 57.37 E-value: 2.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9241 SNDTLTYTWNFGDDTDPVvGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFT 9320
Cdd:COG3291 21 SGNATSYEWDFGDGTTST-EANPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTVTTLANTANG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9321 ATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTA 9400
Cdd:COG3291 100 GATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTTDVTSDGTTSASTNPSVT 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9401 ITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDI 9480
Cdd:COG3291 180 TDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNTVTTSGANTA 259
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 9481 NIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQ 9545
Cdd:COG3291 260 GTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTT 324
|
|
| PKD |
cd00146 |
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an ... |
9385-9466 |
2.79e-07 |
|
polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here. The domain is also found in microbial collagenases and chitinases.
Pssm-ID: 238084 [Multi-domain] Cd Length: 81 Bit Score: 52.11 E-value: 2.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9385 PIVDAGADLTTDEGTAITFNgnFTDPGILDTHTITWDFGDGTT-AEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLT 9463
Cdd:cd00146 1 PTASVSAPPVAELGASVTFS--ASDSSGGSIVSYKWDFGDGEVsSSGEPTVTHTYTKPGTYTVTLTVTNAVGSSSTKTTT 78
|
...
gi 2711936800 9464 VSV 9466
Cdd:cd00146 79 VVV 81
|
|
| PTZ00259 |
PTZ00259 |
endonuclease G; Provisional |
8082-8322 |
2.82e-07 |
|
endonuclease G; Provisional
Pssm-ID: 240335 [Multi-domain] Cd Length: 434 Bit Score: 57.56 E-value: 2.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8082 PYKDNLLLeRPQYTLSFNGTTNTANWASWQLDkYWFYIKGKGYPIADQqNKRNFAKDPTLPPGFAAITDPYgakvDGISY 8161
Cdd:PTZ00259 106 PSTENLRL-YEGYVSSLNYERRIPNWVAEYIP-YRGISVEAGEKKANR-ADCVFYADPTVPEAFRAENKDY----TGSGY 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8162 DGGHLTPVK-HRNRHNKDIVAVNLISNIFPQQSSNNQREWRAIEDLAAKFAIKGNKEVYITAG----------TDGIKKL 8230
Cdd:PTZ00259 179 SRGHLAAAGfHKASQTAMDDTFLLSANIVPQDLTNNAGDWLRLENLTRKLAREYEVGVYVVSGplfvprymreKLRKWRL 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8231 KDGSGEAKVIGSGGDitiPENIWMAMLVIDP--------------DKEPTNNSYTIG-FYLENREysrpsnnaagISSTP 8295
Cdd:PTZ00259 259 AEPSEIHKPDSPADK---TPKKVVTYEVIGDnnvavpthlfkvilAEKNDGPPHEVAaFLMPNEP----------ISKEK 325
|
250 260
....*....|....*....|....*..
gi 2711936800 8296 NEWKLTVkSVNWIENKTGYDLFSNIDK 8322
Cdd:PTZ00259 326 PLTAYQV-PLEEIEKLTGLQFFPKLDA 351
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9329-9373 |
4.09e-07 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 51.23 E-value: 4.09e-07
10 20 30 40
....*....|....*....|....*....|....*....|....*..
gi 2711936800 9329 DSITYTWDFGN--GITKTGENVSHEFADEGTYNVTLTVQDSDGAATQ 9373
Cdd:pfam00801 24 SNVTYTWDFGDspGTSGSGPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9624-10103 |
4.60e-07 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 57.87 E-value: 4.60e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9624 GIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVN 9703
Cdd:COG4625 20 GGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGG 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9704 HTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVA 9783
Cdd:COG4625 100 GGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9784 GTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFAT 9863
Cdd:COG4625 180 GGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNG 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9864 ADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITDK 9943
Cdd:COG4625 260 GGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGG 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9944 TITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGE-TTKTISVQLNGDITDEYDETFFL 10022
Cdd:COG4625 340 SGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGaGGGGGGGGAGGTGGGGAGGGGGA 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10023 NLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAI-AGSDYKAT 10101
Cdd:COG4625 420 AGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNNTYTGTTTVnGGGNYTQS 499
|
..
gi 2711936800 10102 SG 10103
Cdd:COG4625 500 AG 501
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
5174-5260 |
4.89e-07 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 51.70 E-value: 4.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5174 TPVLAAIGNSSVAEGQTLNLVLSA----SDADGDTLTYSATN----LPPGAVLDPVQGILTWTPNLSQAGTYnNITLTAS 5245
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSAsggsDPYGGSTVTYSTTAtggaLPSGLTLNSSTGTISGTPTSVQPGTY-TFTVTAT 79
|
90
....*....|....*.
gi 2711936800 5246 DGNK-SSSQSFAITVN 5260
Cdd:pfam05345 80 DSSGlSSSTTFTLTVT 95
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
9509-9941 |
5.88e-07 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 57.26 E-value: 5.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9509 GDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTH 9588
Cdd:COG3468 9 ATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNS 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9589 TIIWDFGDGTTLeytphaptpphsplTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGT 9668
Cdd:COG3468 89 TGGGGGNSGTGG--------------TGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGA 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9669 PAYFSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQI 9748
Cdd:COG3468 155 AAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGATGGAGSGGNT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9749 MYIGETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSV 9828
Cdd:COG3468 235 GGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGASGTGGGGTASTGGGGGGGGGNGG 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9829 NDISLIEGDDGNAYAVFTASLSEASlrTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETF 9908
Cdd:COG3468 315 GGGGGSNAGGGSGGGGGGGGGGGGG--GTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGGSGGGGGAGGGGANTGSDGVG 392
|
410 420 430
....*....|....*....|....*....|....
gi 2711936800 9909 FLNLSDAT-NATIADAQAVATILDNDAPPTLTIT 9941
Cdd:COG3468 393 TGLTTGGTgNNGGGGVGGGGGGGLTLTGGTLTVN 426
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9141-9202 |
7.07e-07 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 50.46 E-value: 7.07e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 9141 GTAITFNGSFIDPGIKdthTITWDFGDGTTATGI-LNPTHTYNQDGVYTATLTVTDNDGATNS 9202
Cdd:pfam00801 11 GQPVTFTATLADGSNV---TYTWDFGDSPGTSGSgPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| myxo_dep_M36 |
NF038112 |
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family ... |
6073-6224 |
9.38e-07 |
|
myxosortase-dependent M36 family metallopeptidase; Members of this bacterial protein family have an M36 family metallopeptidase domain, like fungalysin (see PF02128), and a C-terminal MYXO-CTERM domain (see TIGR03901), suggesting processing and surface-anchoring by the still-unknown putative transpeptidase, myxosortase. Members of this family include MXAN_3564 (mepA), part of the effector cargo of outer membrane vesicles that the species produces in large numbers during predation on other microbes.
Pssm-ID: 468355 [Multi-domain] Cd Length: 1597 Bit Score: 56.97 E-value: 9.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6073 ANRAPVVTATSVLThTDLETSIALDKLATDAEGDRIFYRIINPVNGAVTFT-PDGHSARFT-PNAGYSGTASFEVVADDG 6150
Cdd:NF038112 1372 VNRAPVANAGADQT-VDERSTVTLSGSATDPDGDALTYAWTQTAGPTVTLTgADTATASFTaPEVAADTELTFQLTVSAD 1450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6151 YSSSAPALVTVNVSNA--ALVnldfARRGLRLDAGESAELVVVGDFADQENVILPYSYLQLA-------SDNTAVAAVSA 6221
Cdd:NF038112 1451 GQASADVTVTVTVRNVnrAPV----AHAGESITVDEGSTVTLDASATDPDGDTLTYAWTQVAgpsvtltGADSAKLTFTA 1526
|
...
gi 2711936800 6222 GKV 6224
Cdd:NF038112 1527 PEV 1529
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
8942-9555 |
9.70e-07 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 56.70 E-value: 9.70e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8942 IIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYI 9021
Cdd:COG5295 1 SASNAGAVAAGTALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9022 ILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTY 9101
Cdd:COG5295 81 SSVASGGASAATAASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGSTAAAGGAAASTGGSSAAGGSNTATAT 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9102 TAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTY 9181
Cdd:COG5295 161 GSSTANAATAAAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSAS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9182 NQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGddTDPVVGQ 9261
Cdd:COG5295 241 AGAASGNATTASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGG--NAGSGGG 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9262 TVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAApiITNISGDTNINEGATANFTATATDPGNDSITYTWDFGNGI 9341
Cdd:COG5295 319 GAAALGSAGGSSGVGTASGASAAAATNDGTANGAGTSA--AADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSA 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9342 TKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWD 9421
Cdd:COG5295 397 GSGGSSTGASAGGGASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAA 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9422 FGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDT 9501
Cdd:COG5295 477 TAAAATSSAAIAGATATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGSAGGGAAAAAGGGSTTAATGTNSV 556
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 2711936800 9502 LTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNV 9555
Cdd:COG5295 557 AVGNNTATGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVA 610
|
|
| COG3292 |
COG3292 |
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]; |
4132-4314 |
9.72e-07 |
|
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms];
Pssm-ID: 442521 [Multi-domain] Cd Length: 924 Bit Score: 56.54 E-value: 9.72e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4132 VDGNGTLWATTGGGPLLQLDTQTGKIVKQYGDSITQALA-------IQPGTGLIYV-SSGKGIEIFNPINETFTHY---- 4199
Cdd:COG3292 181 VDSDGNLWIGTDGNGLYRLDPNTGKFEHITHDPDPNSLSsnsiyslFEDREGNLWVgTYGGGLNYLDPNNSKFKSYrhnd 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4200 ----SDLRVDSLAFDADGKLWATTW------------PERGDIVRFNENGKPermlefDSPVDSIAFGKvgsrlAGLLFV 4263
Cdd:COG3292 261 pnglSGNSVRSIAEDSDGNLWIRLWigtyggglfrldPKTGKFKRYNPNGLP------SNSVYSILEDS-----DGNLWI 329
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2711936800 4264 SNNNGDLQMVDLAT--LQHIKVANGGSRGE--NIKTTDDGRILLSQSQQIDIFSP 4314
Cdd:COG3292 330 GTSGGGLYRYDPKTgkFTKFSEDNGLSNNFirSILEDSDGNLWVGTNGGLYRLDP 384
|
|
| PQQ_ABC_repeats |
TIGR03866 |
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family ... |
6840-7015 |
1.28e-06 |
|
PQQ-dependent catabolism-associated beta-propeller protein; Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Pssm-ID: 274824 [Multi-domain] Cd Length: 310 Bit Score: 54.66 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6840 VVARIPVGtddvvDRPRDIAFTRDGSRAYVTLENSGRIALVDPLFLQQIDTkpeteeidtikLPTAASPRAIVVDNQDQY 6919
Cdd:TIGR03866 33 VTRTFPVG-----QRPRGITFSKDGKLLYVCASDSDTIQVIDPATGEVLHT-----------LPSGPDPEQFALHPNGKI 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6920 AYIADGRLGIIYVLDINPNsktyhQVIQNIQINGAPLGlreLVVSTDGRKLFATAPASGTA-----KSKIVVVNIDPEDK 6994
Cdd:TIGR03866 97 LYIANEDDALVTVIDIETR-----KVLAQIDVGVEPEG---MAVSPDGKIVVNTSETTNMAhwidtATYEIVDNTLVDAR 168
|
170 180
....*....|....*....|....*....
gi 2711936800 6995 P---EYYQNNLRRWHE-----QVAAIDVE 7015
Cdd:TIGR03866 169 PrfaEFTADGKELWVSseiggTVTVIDVA 197
|
|
| COG3292 |
COG3292 |
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]; |
4070-4233 |
1.31e-06 |
|
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms];
Pssm-ID: 442521 [Multi-domain] Cd Length: 924 Bit Score: 56.15 E-value: 1.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4070 PTSHANIAPLAITVLKDGSVLAsgGANRGSLYRF-LQTGAPLNSGQNSPIPfvtlEYPIFDMTVDGNGTLWATTGGGpLL 4148
Cdd:COG3292 308 PNGLPSNSVYSILEDSDGNLWI--GTSGGGLYRYdPKTGKFTKFSEDNGLS----NNFIRSILEDSDGNLWVGTNGG-LY 380
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4149 QLDTQTGKIVKQYGDSITQALAIQP-------GTGLIYV-SSGKGIEIFNPINETFTHY------SDLRVDSLAFDADGK 4214
Cdd:COG3292 381 RLDPKTGKFTNFTHDPDKNGLSSNYinsifedSDGRLWIgTDGGGLYRYDPKTGKFKHFttkdglPSNTIYSILEDDNGN 460
|
170
....*....|....*....
gi 2711936800 4215 LWATTWPERGDIVRFNENG 4233
Cdd:COG3292 461 LWNFNSASNLGLLSLLGGL 479
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9356-9813 |
1.37e-06 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 56.33 E-value: 1.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9356 GTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPN 9435
Cdd:COG4625 29 GGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGGGGGG 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9436 HVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAV 9515
Cdd:COG4625 109 GGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9516 IGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFG 9595
Cdd:COG4625 189 GGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGAGGGG 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9596 DGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSAT 9675
Cdd:COG4625 269 GGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAGAGGG 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9676 ATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETV 9755
Cdd:COG4625 349 GAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGGGGTG 428
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9756 AFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHI---YNSNGTYSVTLTVTDDDGGVTN 9813
Cdd:COG4625 429 AGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGaggGSGSGAGTLTLTGNNTYTGTTT 489
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4080-4306 |
1.46e-06 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 55.30 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4080 AITVLKDGSVLASGGANRG-SLYRfLQTGAPLNSgqnspipFVTLEYPIFDMTVDGNGTLWATTGGGPLLQL-DTQTGKI 4157
Cdd:COG2319 125 SVAFSPDGKTLASGSADGTvRLWD-LATGKLLRT-------LTGHSGAVTSVAFSPDGKLLASGSDDGTVRLwDLATGKL 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4158 VKQY---GDSITqALAIQP-GTGLIYVSSGKGIEIFNPIN----ETFTHYSDlRVDSLAFDADGKLWATTWpERGDIVRF 4229
Cdd:COG2319 197 LRTLtghTGAVR-SVAFSPdGKLLASGSADGTVRLWDLATgkllRTLTGHSG-SVRSVAFSPDGRLLASGS-ADGTVRLW 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4230 N-ENGKPERMLE-FDSPVDSIAFGKVGSRLAgllfVSNNNGDLQMVDLATLQHIKVANGGSRGEN-IKTTDDGRILLSQS 4306
Cdd:COG2319 274 DlATGELLRTLTgHSGGVNSVAFSPDGKLLA----SGSDDGTVRLWDLATGKLLRTLTGHTGAVRsVAFSPDGKTLASGS 349
|
|
| COG3291 |
COG3291 |
Uncharacterized conserved protein, PKD repeat domain [Function unknown]; |
9760-10075 |
2.56e-06 |
|
Uncharacterized conserved protein, PKD repeat domain [Function unknown];
Pssm-ID: 442520 [Multi-domain] Cd Length: 333 Bit Score: 54.29 E-value: 2.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9760 QFTDPGILDTHTVVWDFGDSNTVAGTlRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDG 9839
Cdd:COG3291 15 QFTDTSSGNATSYEWDFGDGTTSTEA-NPSHTYTTPGTYTVTLTVTDAAGCSDTTTKTITVGAPNPGVTTVTTSTTVTTL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9840 NAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFflnLSDATNAT 9919
Cdd:COG3291 94 ANTANGGATTVVAGSTVGTGVATSTTTAAAPGGGGGTGTTTTTGTDTGLTGSTGTASDTATVTTSVSTT---DVTSDGTT 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9920 IADAQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGE 9999
Cdd:COG3291 171 SASTNPSVTTDTVTTLTGSYTGTIVGGSGSGTVTSGTAGVTTGATSGTSGTGSATSGVAVTDVTLTGISTGDAGTPGTNT 250
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 10000 TTKTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSV 10075
Cdd:COG3291 251 VTTSGANTAGTSTITGGTSGVVTTSAATGTSTNGTGGLGTTTAITPGNVSTTADVTGGTATLAVSSTLTTNDTTGS 326
|
|
| MJ0795 |
COG1361 |
S-layer protein MJ0795, predicted component of type IV pili-like system [General function ... |
2795-3201 |
2.66e-06 |
|
S-layer protein MJ0795, predicted component of type IV pili-like system [General function prediction only];
Pssm-ID: 440972 [Multi-domain] Cd Length: 409 Bit Score: 54.32 E-value: 2.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2795 LGSATIPVIYQEPDLQVTNLIVPETSPTSGQTLGVswTVKNIGTRDTRESswydRVYLSRDESLDFNDtflGEFTRRGGL 2874
Cdd:COG1361 12 AGPAAAVAVSGSPDLSVTVSDSNEVAPGEEVTLTV--TITNDGTLTARNV----TVELEGDYPFEVKS---GEQSVGGSL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2875 QQGQSYTGSSQITLPDGI-AGNFYLlvftDANINQQYNKLGFEGNSTFarvpefrdegnnitaaPMKVVLQPPPDLQVTS 2953
Cdd:COG1361 83 PPGQSVTVTFTVTVPEDAePGTYPI----PVTVSYSYGYTDRTETETY----------------TVTVKVEGEPRFEVVS 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2954 VIIPERATSGQSFNIKYTVENKGTGN----TPTRQNRWNDLIYLSRD----EFLDLQSDRYLGYVEHT----GGLTAGSS 3021
Cdd:COG1361 143 VTSPDSLTPGDTGTLTLTIKNTGTGTaknvTVTLTSPSGDLTDLEPGprpaTNVVVVLSSPVSPVGSNsvalGTLEPGES 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3022 YTVNQTLQLPNDLVGSYYVFVITdapqssagglvFEGNNEGNNATPSLQPLVLELPPPADLQVDeiTIPSNAKSGESVQI 3101
Cdd:COG1361 223 ATFTFKVDVSEDAEPGPYPLPLT-----------VTYRDEDGDTYSDTVTIGVYVAPKADFEVE--NVESTITAGETVTI 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 3102 SWKVTNYGDNPASgqwSDAVYLSADAVWDINDrpigRVSYSGNLASGAEYTSTLT-AILPPATPGQYRIIVRpdifnqvY 3180
Cdd:COG1361 290 TITVTNTGNETAK---NVVARLSADDPLSSLD----DEAFIGDLAPGESATVTFTvSASSDATPGTYPITVT-------I 355
|
410 420
....*....|....*....|.
gi 2711936800 3181 EAENEANNRTTSaDSLNVTVE 3201
Cdd:COG1361 356 RYDDDDGNTQLS-DTITVPVE 375
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
9713-10181 |
2.85e-06 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 54.95 E-value: 2.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9713 TVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTvvwdFGDSNTVAGTLRPTHIY 9792
Cdd:COG3468 1 TASGGGGGATGLGGGGTGGGGGLGGTGGGNAGLGIGNGGGGGAASGSGAGGVAGNGGGG----GGGAGGGGGGAGSGGGL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9793 NSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGS 9872
Cdd:COG3468 77 AGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGGTGSAGGGGGGGGGGTGVGGTGAAA 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9873 DYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPTLTITdkTITESDNGT 9952
Cdd:COG3468 157 AGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTGGGGGGGGGAGGAT--GGAGSGGNT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9953 TTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGtlsfapgettktisvqlnGDITDEYDETFFLNLSDATNATI 10032
Cdd:COG3468 235 GGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSG------------------GGGGGGANGGGSGGGGGASGTGG 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10033 TDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFApget 10112
Cdd:COG3468 297 GGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSGGGGGGG---- 372
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 10113 sqtiiveVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINgsGDFDGN 10181
Cdd:COG3468 373 -------SGGGGGAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVN--GNYTGN 432
|
|
| Vgb |
COG4257 |
Streptogramin lyase [Defense mechanisms]; |
4061-4306 |
2.98e-06 |
|
Streptogramin lyase [Defense mechanisms];
Pssm-ID: 443399 [Multi-domain] Cd Length: 270 Bit Score: 53.48 E-value: 2.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4061 TAQAFATGIPTSHANIAPLAITVLKDGSVLASGGANrGSLYRF-LQTGAplnsgqnspipFVTLEYPIFDM----TVDGN 4135
Cdd:COG4257 2 ASAVDITEYPVPAPGSGPRDVAVDPDGAVWFTDQGG-GRIGRLdPATGE-----------FTEYPLGGGSGphgiAVDPD 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4136 GTLW-ATTGGGPLLQLDTQTGKIvKQY----GDSITQALAIQPGtGLIYVSSGKG--IEIFNPINETFTHY----SDLRV 4204
Cdd:COG4257 70 GNLWfTDNGNNRIGRIDPKTGEI-TTFalpgGGSNPHGIAFDPD-GNLWFTDQGGnrIGRLDPATGEVTEFplptGGAGP 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4205 DSLAFDADGKLWATTWpERGDIVRFN-ENGKPER---MLEFDSPVdSIAFGKVGSrlagLLFVSNNNGDLQMVDLAT--L 4278
Cdd:COG4257 148 YGIAVDPDGNLWVTDF-GANAIGRIDpDTGTLTEyalPTPGAGPR-GLAVDPDGN----LWVADTGSGRIGRFDPKTgtV 221
|
250 260
....*....|....*....|....*...
gi 2711936800 4279 QHIKVANGGSRGENIKTTDDGRILLSQS 4306
Cdd:COG4257 222 TEYPLPGGGARPYGVAVDGDGRVWFAES 249
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9562-9648 |
3.08e-06 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 48.99 E-value: 3.08e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9562 GADFT-TDEGSAVTFNGNFTDPGiLDTHTII---WDFGDGTTLEYTphaptpphsplTPTHIYADNGIYNVTLTVRDNDG 9637
Cdd:smart00089 1 VADVSaSPTVGVAGESVTFTATS-SDDGSIVsytWDFGDGTSSTGP-----------TVTHTYTKPGTYTVTLTVTNAVG 68
|
90
....*....|.
gi 2711936800 9638 GVTiDTLTVTV 9648
Cdd:smart00089 69 SAS-ATVTVVV 78
|
|
| PKD |
smart00089 |
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 ... |
9398-9466 |
3.11e-06 |
|
Repeats in polycystic kidney disease 1 (PKD1) and other proteins; Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.
Pssm-ID: 214510 [Multi-domain] Cd Length: 79 Bit Score: 48.99 E-value: 3.11e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 9398 GTAITFNGNFTDPGilDTHTITWDFGDGTTAEGTlTPNHVFFNNGVYSVKLTVKDNDGGeNSDTLTVSV 9466
Cdd:smart00089 14 GESVTFTATSSDDG--SIVSYTWDFGDGTSSTGP-TVTHTYTKPGTYTVTLTVTNAVGS-ASATVTVVV 78
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
2947-3065 |
5.58e-06 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 48.81 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2947 PDLQVTSVIIPERATSGQSFNIKYTVENKGTGNTPTrqnrWNDLIYLSRdeflDLQSDRYLgyvehtGGLTAGSSYTVnq 3026
Cdd:pfam07705 2 PDLIVQSISPPSEAYVGEENTITVTVKNQGTAAAGA----FNVALYVDG----TSVGTITV------PGLAAGESTTV-- 65
|
90 100 110
....*....|....*....|....*....|....*....
gi 2711936800 3027 TLQLPNDLVGSYYVFVITDapqssAGGLVFEGnNEGNNA 3065
Cdd:pfam07705 66 SFSWTPPTEGSYTLTVVVD-----PDNTVAES-NETNNE 98
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
8752-9228 |
7.90e-06 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 53.63 E-value: 7.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8752 SGSGTGGEWGNNLQAPLTAILLADITNGNFSESDPTKPEYGWTTRGAATILNSAAVLTEDSPFNSNFTQSFIIPEHAKYL 8831
Cdd:COG4625 25 GGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGTGGVGGGGGGGGGGG 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8832 QFTILDTHLGTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRT 8911
Cdd:COG4625 105 GGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGAGGGGGGGGGGGGGGGGGGGGGGGG 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8912 VKIDISSITPGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAP 8991
Cdd:COG4625 185 GGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGNGGGGGA 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8992 TNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGN 9071
Cdd:COG4625 265 GGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGSGGAG 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9072 DLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFI 9151
Cdd:COG4625 345 AGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGGGGGGGGAGGTGGGGAGGGGGAAGGGG 424
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 9152 DPGikDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNidpiinDISGDTNINEG 9228
Cdd:COG4625 425 GGT--GAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAGTLTLTGNN------TYTGTTTVNGG 493
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9245-9288 |
9.21e-06 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 47.38 E-value: 9.21e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 2711936800 9245 LTYTWNFGDDTDPV-VGQTVNHIFAQDGNYTVTLTVTDTSNGITS 9288
Cdd:pfam00801 26 VTYTWDFGDSPGTSgSGPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
8748-9508 |
9.43e-06 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 53.61 E-value: 9.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8748 RSLESGSGTGGEWGNNLQAPLTAILLADITNGNFSESDPTKPEYGWTTRGAATILNSAAVLTEDSPFNSNFTQSFIIPEH 8827
Cdd:COG3209 2 TSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8828 AKYLQFTILDTHLGTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALN 8907
Cdd:COG3209 82 ALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGL 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8908 TPRTVKIDISSITPGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIAND--DIATTDQAKPVAINVLANDSTQGTV 8985
Cdd:COG3209 162 AGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGaySGSATTATGTALGTPASVAATVTGS 241
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8986 QLGAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAI 9065
Cdd:COG3209 242 ATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTT 321
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9066 ATDPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAIT 9145
Cdd:COG3209 322 GTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTT 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9146 FNGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNI 9225
Cdd:COG3209 402 GVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGT 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9226 NEGATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNI 9305
Cdd:COG3209 482 GGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTG 561
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9306 SGDTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAP 9385
Cdd:COG3209 562 TGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTT 641
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9386 IVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVS 9465
Cdd:COG3209 642 GGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGT 721
|
730 740 750 760
....*....|....*....|....*....|....*....|...
gi 2711936800 9466 VNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDF 9508
Cdd:COG3209 722 TTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDA 764
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
6072-6150 |
1.11e-05 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 47.72 E-value: 1.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6072 AANRAPVVTATSVLTHTDleTSIALDklaTDAEGDRI------FYRIINPVNGAVTFTPDGhSARFTPNAGYSGTASFEV 6145
Cdd:pfam17963 10 PVNDAPVAVDDSVTVTED--TVLAND---SDPDGDPLtitsltVTIVTAPANGTVTVNADG-TLTYTPNAGFSGTDSFTY 83
|
....*
gi 2711936800 6146 VADDG 6150
Cdd:pfam17963 84 TVSDG 88
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
1639-1756 |
2.12e-05 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 47.27 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1639 APDLIVKSVFTPPTASIGQTTDISWTVANTGSLSATqAWTDRVYLikentNGTF-DGVTLPssaifldilrhetGLAAND 1717
Cdd:pfam07705 1 LPDLIVQSISPPSEAYVGEENTITVTVKNQGTAAAG-AFNVALYV-----DGTSvGTITVP-------------GLAAGE 61
|
90 100 110
....*....|....*....|....*....|....*....
gi 2711936800 1718 EYTtpvRKVLLPEVEDGDYRIVVITDFDNSILEGKDENN 1756
Cdd:pfam07705 62 STT---VSFSWTPPTEGSYTLTVVVDPDNTVAESNETNN 97
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
1770-1882 |
2.62e-05 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 46.89 E-value: 2.62e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1770 DLVPTIIYSPATATSGTTIPLKWSVTNNGSADtVGGWVDRIYLSSDTkfdPSDLLLterkynGSLSSGATTDElelNIAI 1849
Cdd:pfam07705 3 DLIVQSISPPSEAYVGEENTITVTVKNQGTAA-AGAFNVALYVDGTS---VGTITV------PGLAAGESTTV---SFSW 69
|
90 100 110
....*....|....*....|....*....|...
gi 2711936800 1850 PLDVSSDryRYLLVVTDADNQIKElgGEENNNA 1882
Cdd:pfam07705 70 TPPTEGS--YTLTVVVDPDNTVAE--SNETNNE 98
|
|
| Vgb |
COG4257 |
Streptogramin lyase [Defense mechanisms]; |
4069-4229 |
2.88e-05 |
|
Streptogramin lyase [Defense mechanisms];
Pssm-ID: 443399 [Multi-domain] Cd Length: 270 Bit Score: 50.40 E-value: 2.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4069 IPTSHANIAPLAITVLKDGSVLASGGANrGSLYRF-LQTGA----PLNSGQNSPipfvtleypiFDMTVDGNGTLWATT- 4142
Cdd:COG4257 95 FALPGGGSNPHGIAFDPDGNLWFTDQGG-NRIGRLdPATGEvtefPLPTGGAGP----------YGIAVDPDGNLWVTDf 163
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4143 GGGPLLQLDTQTGKIVKQYGDSITQA---LAIQPgTGLIYV--SSGKGIEIFNPINETFTHY----SDLRVDSLAFDADG 4213
Cdd:COG4257 164 GANAIGRIDPDTGTLTEYALPTPGAGprgLAVDP-DGNLWVadTGSGRIGRFDPKTGTVTEYplpgGGARPYGVAVDGDG 242
|
170
....*....|....*.
gi 2711936800 4214 KLWATTWpERGDIVRF 4229
Cdd:COG4257 243 RVWFAES-GANRIVRF 257
|
|
| COG4625 |
COG4625 |
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function ... |
9953-10476 |
4.64e-05 |
|
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown];
Pssm-ID: 443664 [Multi-domain] Cd Length: 900 Bit Score: 50.93 E-value: 4.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9953 TTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEYDETFFLNLSDATNATI 10032
Cdd:COG4625 1 GGGGGGGGGGGGGGGGTGGGGAGGGGGAGGGAGGGGAGGGGGGGGGGGGAGGGGGGGGTGGGGGGGGGGGGGGAGGGGGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10033 TDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGSDYKATSGTLSFAPGET 10112
Cdd:COG4625 81 GGGGGGGGGTGGVGGGGGGGGGGGGGGGGGGGGGGGGSAGGGGGGAGGAGGGGGGGAGGGGGGGGGGGAGGGGGGGAGGA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10113 SQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINGSGDFDGNPLDLYDDTLIY 10192
Cdd:COG4625 161 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10193 AAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLVPPQIVEPQTIIVPAYASVKQQ 10272
Cdd:COG4625 241 GGGGGGGAGGGGGGGGGNGGGGGAGGGGGGGGGGSGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10273 ELErrIPTGATTLTFNMQQNPMNNAADWAKKFPPSGTASNPTVVRVTGGGLNIPANVSLNNYVIIVEQGDINFNGSGHNL 10352
Cdd:COG4625 321 GGG--GGGGGGGGGGAGGGGGSGGAGAGGGGAGGGGAGGGGGGGTGGGGGGGGGGGGGSGGGGAGGGGGSGGGGGGGAGG 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10353 NNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITFNGATSTVDESSNLQVISQGD----L 10428
Cdd:COG4625 399 GGGGGGAGGTGGGGAGGGGGAAGGGGGGTGAGGGGGGGGTGAGGGGATGGGGGGGGGAGGSGGGAGAGGGSGSGAgtltL 478
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 10429 TYNGSANTRGTFLAAKNFTYNGNSTL--------FGSIDVKGNIIFNGQATVTAIG 10476
Cdd:COG4625 479 TGNNTYTGTTTVNGGGNYTQSAGSTLavevdaanSDRLVVTGTATLNGGTVVVLAG 534
|
|
| RHS_core |
NF041261 |
RHS element core protein; |
5800-5896 |
5.53e-05 |
|
RHS element core protein;
Pssm-ID: 469161 [Multi-domain] Cd Length: 1261 Bit Score: 51.16 E-value: 5.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5800 DGTVYH--LSSAGGVTEEIAANGTRLVYS---DSG----ITSSAGETVRFVKDSAGRLTQITAPDGSLVVYGYDTQGNLV 5870
Cdd:NF041261 425 DGSVTRsgYDAAGRLTAQTDAAGRRTEYSlnvVSGditdITTPDGRETKFYYNDGNQLTSVTSPDGLESRREYDEPGRLV 504
|
90 100
....*....|....*....|....*.
gi 2711936800 5871 SARNlASGESSRYGYSSSVLTLATGT 5896
Cdd:NF041261 505 SETS-RSGETTRYRYDDPHSELPATT 529
|
|
| COG3292 |
COG3292 |
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]; |
4127-4271 |
8.07e-05 |
|
Periplasmic ligand-binding sensor domain [Signal transduction mechanisms];
Pssm-ID: 442521 [Multi-domain] Cd Length: 924 Bit Score: 50.37 E-value: 8.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4127 IFDMTVDGNGTLWATTGGGpLLQLDtqtGKIVKQY----------GDSITQALAIQPgTGLIYVSSGKGIEIFNPINETF 4196
Cdd:COG3292 38 VNSIAQDSDGFLWIGTEDG-LNRYD---GYEFKVFrhdpgdpnslPSNYIRALLEDS-DGRLWIGTDGGLSRYDPKTDKF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4197 THY------SDLRVDSLAFDADGKLWATTwpeRGDIVRFN-ENGKPERMLEFDSP---VDSIAFGK-------------V 4253
Cdd:COG3292 113 TRYpldpglPNNSIRSIAEDSDGNIWVGT---SNGLYRYDpKTGKFKRFTLDGLPsntITSLAEDAdgnlwvdsdgnlwI 189
|
170
....*....|....*...
gi 2711936800 4254 GSRLAGLLFVSNNNGDLQ 4271
Cdd:COG3292 190 GTDGNGLYRLDPNTGKFE 207
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9398-9459 |
8.27e-05 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 44.68 E-value: 8.27e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 9398 GTAITFNGNFTDPGILdthTITWDFGDGTTAEGT-LTPNHVFFNNGVYSVKLTVKDNDGGENS 9459
Cdd:pfam00801 11 GQPVTFTATLADGSNV---TYTWDFGDSPGTSGSgPTVTHTYLSPGTYTVTLTASNAVGSANA 70
|
|
| tand_rpt_95 |
NF012211 |
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several ... |
4969-5077 |
8.58e-05 |
|
tandem-95 repeat; This 95-amino acid repeat occurs in tandem in proteins that may be several thousand amino acids long.
Pssm-ID: 333740 [Multi-domain] Cd Length: 98 Bit Score: 45.31 E-value: 8.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4969 EINEFSNITLNRgevKELVLQATDADGDPLVlqlkAESAGYGIPDFVRFIDNGDRTATLRLAPGINdgGNYSFTLTATDN 5048
Cdd:NF012211 1 STDEDGSITITQ---EQLLANASDVDGDDLT----VSNVSYSGPTNGTVTDNGDGTYTYTPNENFN--GDDSFTYTVSDG 71
|
90 100
....*....|....*....|....*....
gi 2711936800 5049 GNGSANAiqsdeyTFVVSVNTLNDPPILP 5077
Cdd:NF012211 72 TGATATA------TVFVTVNPVNDAPVAG 94
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9458-10016 |
8.64e-05 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 50.20 E-value: 8.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9458 NSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQ 9537
Cdd:COG4935 15 AVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAAPAAATVVGAA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9538 DPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPT 9617
Cdd:COG4935 95 LGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAGAAGGGGGVGV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9618 HIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGTDAV 9697
Cdd:COG4935 175 AAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGGLGAAATAA 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9698 VGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGeTVAFWGQFTDPGILDTHTVVWDFG 9777
Cdd:COG4935 255 AADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAA-AAAAASAGSGGGGGSAAAAGAAAA 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9778 DSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRTV 9857
Cdd:COG4935 334 AAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGAVGAGTA 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9858 TANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDAPPT 9937
Cdd:COG4935 414 AGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAAAAAAGLATT 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 9938 LTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLngDITDEY 10016
Cdd:COG4935 494 AAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGAVEDVTVTV--DITHTY 570
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
8682-9507 |
8.69e-05 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 50.14 E-value: 8.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8682 NPGFDRYIQTVNSTKTFIGDNFTATLTPDGSHLDSKVHPYDLMNNTLAPGVRKLPSWLNLQMLTAIRSLESGSGTGGEWG 8761
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8762 NNLQAPLTAILLADITNGNFSESDPTKPEYGWTTRGAATILNSAAVLTEDSPFNSNFTQsfiipehakylqFTILDTHLG 8841
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGA------------TAGSATTGS 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8842 TNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVKIDISSITP 8921
Cdd:COG3209 149 TDGGRGGVAVTGLAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTAL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8922 GTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTNGSIIINND 9001
Cdd:COG3209 229 GTPASVAATVTGSATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGG 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9002 RTLTYTPNNTfvGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDLTYTWNFGD 9081
Cdd:COG3209 309 GTAGGTTTAA--GTTGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVG 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9082 GSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTI 9161
Cdd:COG3209 387 GGGTATGSGGGSSTTGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGG 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9162 TWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPS 9241
Cdd:COG3209 467 AATGATTGGGTEAGTGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTG 546
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9242 NDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTA 9321
Cdd:COG3209 547 DTTTTGTVGTGTSTGTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGT 626
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9322 TATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAI 9401
Cdd:COG3209 627 ASGLERATASTGSTTGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGT 706
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9402 TFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNhvffnngVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDIN 9481
Cdd:COG3209 707 TVTTLAGGTTTRLGTTTTGGGGGTTTDGTGTGGT-------TGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVTQ 779
|
810 820 830
....*....|....*....|....*....|.
gi 2711936800 9482 IEEGATATFSAI-----ATDPGNDTLTYTWD 9507
Cdd:COG3209 780 GTYTTRYTYDALgrltsVTYPDGETVTYTYD 810
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
5034-5886 |
9.38e-05 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 50.14 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5034 NDGGNYSFTLTATDNGNGSANAIQSDEYTFVVSVNTLNDPPILPFIGNKVAVVGETLEFIVKAGDRNQDNLSFNLSGLPV 5113
Cdd:COG3209 4 LGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGVTAL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5114 GATLTPTGIYGEALFQWTPTAADINTYPVTIAVSDSGNGNPNEVFVSQQQFNLIVRTANTTPVLAAIGNSSVAEGQTLNL 5193
Cdd:COG3209 84 GDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTGLAG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5194 VLSASDADGDTLTYSATNLPPGAVLDPVQGILTWTPNLSQAGTYNnITLTASDGNKSSSQSFAITVNNTNQAPVLAPLPI 5273
Cdd:COG3209 164 GGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAI-LGGLAGAYSGSATTATGTALGTPASVAATVTGSA 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5274 QTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVLDPRTGKFTWKPNYEQAGEYVLKFAVKDTQNATSQSDVTLRVAN 5353
Cdd:COG3209 243 TGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGTTG 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5354 VNRSPVISVSPHAVALGEKLQFQVVGTDPDNNTNLTFSAANLPDEAVLDAATGMFSWMPSPGQVGDYAVTYAVSDGETTV 5433
Cdd:COG3209 323 TAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSSTTG 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5434 TQTSTVRVAIAPTPPIVNFDLTPSFPAVPGQKVIVQTLASSLAAIANLSATIDGHTVLVDTQGRIEIIPTTPGRLVVDVT 5513
Cdd:COG3209 403 VGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAGTG 482
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5514 ATDADGRVGHNSTVVKVRDPQDLAAPIVAFAPGLDGAKLTNVTNIIGSVSDVNLDNWVLEIADFGEDVYRTLASGNGAVS 5593
Cdd:COG3209 483 GGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTSTGT 562
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5594 DITLAQFDPGKLENGFYQLRLRATDISDRISSTQVIVEVNTATKPSAYTRTQTDLSITFSSTLPDSLPHSLNLIRTYSSL 5673
Cdd:COG3209 563 GGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGSTTG 642
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5674 NSDEVGSFGNGWQWATLDTNIQTNVPLTGRESLGVYEPFRVGTRLYLTTPSGERVGFTFAPQKHIIPGLTYYTPAWVADS 5753
Cdd:COG3209 643 GTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLGTT 722
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5754 GVNYkleSADATLTLAGNRLYDLKTGLAYNPGRGSYSDAEYTLTAVDGTVYHLSSAGGVTEEIAangTRLVYSDSG---- 5829
Cdd:COG3209 723 TTGG---GGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETTPGGVTQGTYT---TRYTYDALGrlts 796
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 5830 ITSSAGETVRFVKDSAGRLTQITAPDGSLVV------YGYDTQGNLVSARNLASGESSRYGYS 5886
Cdd:COG3209 797 VTYPDGETVTYTYDALGRLTSVITVGSGGGTdlqdrtYTYDAAGNITSITDALRAGTLTQTYT 859
|
|
| Cadherin_5 |
pfam17892 |
Cadherin-like domain; |
6073-6164 |
1.06e-04 |
|
Cadherin-like domain;
Pssm-ID: 436123 [Multi-domain] Cd Length: 98 Bit Score: 45.26 E-value: 1.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6073 ANRAPVVTATSVLTHTDLETSIALDKL-----ATDAEGDR--IFYRIINPVNGAVTFTPDGhSARFTPNAGYSGTASFEV 6145
Cdd:pfam17892 1 VNDAPVATGDVTLATGTEDTPLTITAAqllanATDVDGDTlsVTNLTADAGHGTVVDNGDG-TYTFTPAANYNGPVSFTY 79
|
90
....*....|....*....
gi 2711936800 6146 VADDGYSSSAPALVTVNVS 6164
Cdd:pfam17892 80 TVSDGHGGTTTATASLTVT 98
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4088-4304 |
1.14e-04 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 49.14 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4088 SVLASGGANRGSLYRFLQTGAPLNSGQNSPIPFVTLEYPIFDMTVDGNGTLWATTGGGPLLQL-DTQTGKIVKQ---YGD 4163
Cdd:COG2319 42 LAASPDGARLAAGAGDLTLLLLDAAAGALLATLLGHTAAVLSVAFSPDGRLLASASADGTVRLwDLATGLLLRTltgHTG 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4164 SITqALAIQP-GTGLIYVSSGKGIEIFNPIN----ETFTHYSDlRVDSLAFDADGKLWATTWpERGDIVRFN-ENGKPER 4237
Cdd:COG2319 122 AVR-SVAFSPdGKTLASGSADGTVRLWDLATgkllRTLTGHSG-AVTSVAFSPDGKLLASGS-DDGTVRLWDlATGKLLR 198
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2711936800 4238 MLE-FDSPVDSIAFGKVGSRLAgllfVSNNNGDLQMVDLATLQHIKVANGGSRG-ENIKTTDDGRILLS 4304
Cdd:COG2319 199 TLTgHTGAVRSVAFSPDGKLLA----SGSADGTVRLWDLATGKLLRTLTGHSGSvRSVAFSPDGRLLAS 263
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
8988-9543 |
1.28e-04 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 49.43 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8988 GAAPTNGSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIAT 9067
Cdd:COG4935 1 GAAGGAGSTTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9068 DPGNDLTYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFN 9147
Cdd:COG4935 81 VDAAPAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9148 GSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINE 9227
Cdd:COG4935 161 AVAGAAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAA 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9228 GATAKFTATATNPSNDTLTYTWNFGDDTDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISG 9307
Cdd:COG4935 241 AAGVGGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGG 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9308 DTNINEGATANFTATATDPGNDSITYTWDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIV 9387
Cdd:COG4935 321 GGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGG 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9388 DAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVN 9467
Cdd:COG4935 401 VASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTT 480
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 9468 NVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAA 9543
Cdd:COG4935 481 AAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGA 556
|
|
| SGL |
pfam08450 |
SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in ... |
4080-4251 |
1.28e-04 |
|
SMP-30/Gluconolactonase/LRE-like region; This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
Pssm-ID: 462480 [Multi-domain] Cd Length: 246 Bit Score: 48.03 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4080 AITVLKDGSVLAsggANRGSLYRF-LQTGA--PLNSGQNSPIPFVTLEypifDMTVDGNGTLWATT---------GGGPL 4147
Cdd:pfam08450 45 AIAPRDDGGLIV---ALKDGVALLdLATGEltPLADPEDDDWPLNRFN----DGKVDPDGRFWFGTmgddeapggDPGAL 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4148 LQLDTQtGKIVKQYGD-SITQALAIQP-GTGLIYVSSGKGI-----------EIFNPinETFTHY--SDLRVDSLAFDAD 4212
Cdd:pfam08450 118 YRLDPD-GKLTRVLDGlTISNGLAWSPdGRTLYFADSPARKiwaydydldggLISNR--RVFADFkpGLGRPDGMAVDAE 194
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 2711936800 4213 GKLWATTWpERGDIVRFNENGKPERMLEFdsPVD---SIAFG 4251
Cdd:pfam08450 195 GNVWVARW-GGGKVVRFDPDGKLLREIEL--PAKrptSCAFG 233
|
|
| PRK08026 |
PRK08026 |
FliC/FljB family flagellin; |
8973-9211 |
1.46e-04 |
|
FliC/FljB family flagellin;
Pssm-ID: 236140 [Multi-domain] Cd Length: 529 Bit Score: 48.97 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8973 INVLANDSTQgTVQLGAapTNGSII------INNDrTL---------TYTPNNTFVGTDTFTYIILDNNAIsneATVTIT 9037
Cdd:PRK08026 135 VNVLAKDGSM-KIQVGA--NDGETItidlkkIDSD-TLgldgfnvngKGTVANTAATVSDLTAAGATLDTT---GLYDVK 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9038 VNNIAPTIDNITveSNITEGTTATFSAIATdpgndlTYTWNFGDGSNPVTGKQVNHTfADNGTYTAiltVTDTAGASTVE 9117
Cdd:PRK08026 208 TKNAALTTADAL--AKLGDGDKVTATATGG------DYTYNAKSGKYQAADLAATLT-PDVGGTAG---ASYTIKDGTYE 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9118 tllLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIK-DTHTITWDFGDGTTATGILNPTHTYN-QDGVYTATLTVTD 9195
Cdd:PRK08026 276 ---VNVDSDGKITLGGSALYIDATGNLTTNNAGAATKATlDALKKTASEGAATAKAALAAAGVTVAdGVTAKTVKMSYTD 352
|
250
....*....|....*.
gi 2711936800 9196 NDGATNSNSLTVTVNN 9211
Cdd:PRK08026 353 KNGKVIDGGYAVKTGD 368
|
|
| RhsA |
COG3209 |
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction ... |
5102-5874 |
2.07e-04 |
|
Uncharacterized conserved protein RhaS, contains 28 RHS repeats [General function prediction only];
Pssm-ID: 442442 [Multi-domain] Cd Length: 1103 Bit Score: 48.98 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5102 DNLSFNLSGLPVGATLTPTGIYGEALFQWTPTAADINTYPVTIAVSDSGNGNPNEVFVSQQQFNLIVRTANTTPVLAAIG 5181
Cdd:COG3209 1 ETSLGLVGGTTGASSTLLAATNAGGGTAVTNAGSTVLLAKGGLSTAAAAGGAATLTARSASTTDVVGTLTGAGGTSAGGV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5182 NSSVAEGQTLNLVLSASDADGDTLTYSATNLPPGAVLDPVQGILTWTPNLSQAGTYNNITLTASDGNKSSSQSFAITVNN 5261
Cdd:COG3209 81 TALGDASAAGGGYVGGAAAGGGATLTGLAAATASAGRLVSTGAGAGGTVTAATGGTLGATAGSATTGSTDGGRGGVAVTG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5262 TNQAPVLAPLPIQTAQENNLIQFTLAAADIDNDSLIYSAVSALPTGAVLDPRTGKFTWKPNYEQAGEYVLKFAVKDTQNA 5341
Cdd:COG3209 161 LAGGGASAYGLTLGGAAAGPATGVGTGAVTLATGLAGSALLALGSGAILGGLAGAYSGSATTATGTALGTPASVAATVTG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5342 TSQSDVTLRVANVNRSPVISVSPHAVALGEKLQFQVVGTDPDNNTNLTFSAANLPDEAVLDAATGMFSWMPSPGQVGDYA 5421
Cdd:COG3209 241 SATGAAGAGAAVATAATTLGGTTGAGTGASGAGLDASTGTGGAGGSNAAATAGGLGGAGLGSGGAGGGGTAGGTTTAAGT 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5422 VTYAVSDGETTVTQTSTVRVAIAPTPPIVNFDLTPSFPAVPGQKVIVQTLASSLAAIANLSATIDGHTVLVDTQGRIEII 5501
Cdd:COG3209 321 TGTAAVSGAADAGTTTTTGTGTGGTTTTVGGGGSLTLGGYGAAGGLTTSVGAGGGGSTSGSTTTVGGGGTATGSGGGSST 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5502 PTTPGRLVVDVTATDADGRVGHNSTVVKVRDPQDLAAPIVAFAPGLDGAKLTNVTNIIGSVSDVNLDNWVLEIADFGEDV 5581
Cdd:COG3209 401 TGVGAGTTTTSTTGGDGGPATAAGALTAGGTATGTGTGGGGTTAGTDATTTTGGAGASGTLTTTGGAATGATTGGGTEAG 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5582 YRTLASGNGAVSDITLAQFDPGKLENGFYQLRLRATDISDRISSTQVIVEVNTATKPSAYTRTQTDLSITFSSTLPDSLP 5661
Cdd:COG3209 481 TGGGTLTSGSAGATTLGTDTTLDDTLGGTTTTTAGARGLVVTTGTTLTLGTTTTATLSATDATGTGDTTTTGTVGTGTST 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5662 HSLNLIRTYSSLNSDEVGSFGNGWQWATLDTNIQTNVPLTGRESLGVYEPFRVGTRLYLTTPSGERVGFTFAPQKHIIPG 5741
Cdd:COG3209 561 GTGGTGTVTTTGDGTGGASTTTGTTGGTATTTTVTTTTTTSTAGTTTTTTSGYTRAGLTLTLGTGTASGLERATASTGST 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5742 LTYYTPAWVADSGVNYKLESADATLTLAGNRLYDLKTGLAYNPGRGSYSDAEYTLTAVDGTVYHLSSAGGVTEEIAANGT 5821
Cdd:COG3209 641 TGGTTGTGVTTTGTTTTRATGTTGTGTGVTAGLTTLATGGTTVGGGTGTTSTATTGATTGGTETGTTVTTLAGGTTTRLG 720
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 2711936800 5822 RLVYSDSGITSSAGETVRFVKDSAGRLTQITAPDGSLVVYGYDTQGNLVSARN 5874
Cdd:COG3209 721 TTTTGGGGGTTTDGTGTGGTTGTLTTTSTTTTTTAGALTYTYDALGRLTSETT 773
|
|
| AidA |
COG3468 |
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular ... |
8834-9196 |
2.19e-04 |
|
Autotransporter adhesin AidA [Cell wall/membrane/envelope biogenesis, Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442691 [Multi-domain] Cd Length: 846 Bit Score: 48.79 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8834 TILDTHLGTNTNAPSDAFEVALLDARTLTPLLGTSTGLTQTDSLLNLQQSGNAYFSNKVKIAGANTSGDKIALNTPRTVK 8913
Cdd:COG3468 53 AGNGGGGGGGAGGGGGGAGSGGGLAGAGSGGTGGNSTGGGGGNSGTGGTGGGGGGGGSGNGGGGGGGGGGGGTGGGGGGG 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8914 IDISSITPGTVATLYFDLLGFGAKDAKIIIDNVMLLDDNLITPIANDDIATTDQAKPVAINVLANDSTQGTVQLGAAPTN 8993
Cdd:COG3468 133 TGSAGGGGGGGGGGTGVGGTGAAAAGGGTGSGGGGSGGGGGAGGGGGGGAGGSGGAGSTGSGAGGGGGGSGGGGGAAGTG 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 8994 GSIIINNDRTLTYTPNNTFVGTDTFTYIILDNNAISNEATVTITVNNIAPTIDNITVESNITEGTTATFSAIATDPGNDL 9073
Cdd:COG3468 213 GGGGGGGGAGGATGGAGSGGNTGGGVGGGGGSAGGTGGGGLTGGGAAGTGGGGGGTGTGSGGGGGGGANGGGSGGGGGAS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9074 TYTWNFGDGSNPVTGKQVNHTFADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITF------- 9146
Cdd:COG3468 293 GTGGGGTASTGGGGGGGGGNGGGGGGGSNAGGGSGGGGGGGGGGGGGGTTLNGAGSAGGGTGAALAGTGGSGSggggggg 372
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 2711936800 9147 ------NGSFIDPGIKDTHTITWDFGDGTTATGILNPTHTYNQDGVYTATLTVTDN 9196
Cdd:COG3468 373 sgggggAGGGGANTGSDGVGTGLTTGGTGNNGGGGVGGGGGGGLTLTGGTLTVNGN 428
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
5252-5339 |
3.73e-04 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 43.48 E-value: 3.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5252 SQSFAITVNNTNQAPVLAPLPIQTAQENNLIQFTLAAADIDN-DSLIYSAVSALPTGAVLDPRTGKFTWKPNYEQAGEYV 5330
Cdd:pfam17963 1 TATVTVTVTPVNDAPVAVDDSVTVTEDTVLANDSDPDGDPLTiTSLTVTIVTAPANGTVTVNADGTLTYTPNAGFSGTDS 80
|
....*....
gi 2711936800 5331 LKFAVKDTQ 5339
Cdd:pfam17963 81 FTYTVSDGS 89
|
|
| PKD |
pfam00801 |
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. ... |
9570-9640 |
4.22e-04 |
|
PKD domain; This domain was first identified in the Polycystic kidney disease protein PKD1. This domain has been predicted to contain an Ig-like fold.
Pssm-ID: 395646 [Multi-domain] Cd Length: 70 Bit Score: 42.37 E-value: 4.22e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 9570 GSAVTFNGNFTDPGILdthTIIWDFGDGTTLEYTPHaptpphsplTPTHIYADNGIYNVTLTVRDNDGGVT 9640
Cdd:pfam00801 11 GQPVTFTATLADGSNV---TYTWDFGDSPGTSGSGP---------TVTHTYLSPGTYTVTLTASNAVGSAN 69
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9356-9820 |
4.22e-04 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 47.89 E-value: 4.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9356 GTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGTLTPN 9435
Cdd:COG4935 85 PAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAG 164
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9436 HVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAV 9515
Cdd:COG4935 165 AAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGV 244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9516 IGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFG 9595
Cdd:COG4935 245 GGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGS 324
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9596 DGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSAT 9675
Cdd:COG4935 325 AAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASA 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9676 ATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIM--YIGE 9753
Cdd:COG4935 405 AGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSttAAAA 484
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 9754 TVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTV 9820
Cdd:COG4935 485 AAAAGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITV 551
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
5265-5352 |
4.51e-04 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 43.23 E-value: 4.51e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5265 APVLAPLPIQTAQENNLIQFTLAA---ADIDNDSLIYSAVSA----LPTGAVLDPRTGKFTWKPNYEQAGEYVLKFAVKD 5337
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSAsggSDPYGGSTVTYSTTAtggaLPSGLTLNSSTGTISGTPTSVQPGTYTFTVTATD 80
|
90
....*....|....*
gi 2711936800 5338 TQNATSQSDVTLRVA 5352
Cdd:pfam05345 81 SSGLSSSTTFTLTVT 95
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
4744-4844 |
5.54e-04 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 42.84 E-value: 5.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4744 APTLIRPADTIVREGEKVRIQLQATDADIIASIPPLSTSdfqlptslLTYNSNLLPGGSTLDPRTGLFEWTPAYFQAGEF 4823
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSASGGSDPYGGSTVTYS--------TTATGGALPSGLTLNSSTGTISGTPTSVQPGTY 72
|
90 100
....*....|....*....|..
gi 2711936800 4824 EIPFTVSDGESVT-TQTTKITV 4844
Cdd:pfam05345 73 TFTVTATDSSGLSsSTTFTLTV 94
|
|
| RHS_repeat |
pfam05593 |
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be ... |
5843-5874 |
5.54e-04 |
|
RHS Repeat; RHS proteins contain extended repeat regions. These repeats often appear to be involved in ligand binding. Note that this model may not find all the repeats in a protein and that it covers two RHS repeats. The 3D structure of an RHS-repeat-containing protein (the B and C components of an ABC toxin complex) has been determined. The RHS repeats form an extended strip of beta-sheet that spirals around to form a hollow shell, encapsulating the variable C-terminal domain.
Pssm-ID: 461685 [Multi-domain] Cd Length: 37 Bit Score: 41.05 E-value: 5.54e-04
10 20 30
....*....|....*....|....*....|..
gi 2711936800 5843 DSAGRLTQITAPDGSLVVYGYDTQGNLVSARN 5874
Cdd:pfam05593 2 DAAGRLTSVTDPDGRVTTYTYDAAGRLTAVTD 33
|
|
| CADG |
smart00736 |
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan ... |
5270-5355 |
6.24e-04 |
|
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.
Pssm-ID: 214795 [Multi-domain] Cd Length: 97 Bit Score: 43.10 E-value: 6.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5270 PLPIQTAQENNLIQFTLAA---ADIDNDSLIYSAV----SALPTGAVLDPRTGKFTWKPNYEQAGEYVLKFAVKDTQNAT 5342
Cdd:smart00736 3 AIGDQTATEGESFSYTIPSstfTDADGDTLTYSATlsdgSALPSWLSFDSDTGTLSGTPTNSDVGSLSLKVTATDSSGAS 82
|
90
....*....|...
gi 2711936800 5343 SQSDVTLRVANVN 5355
Cdd:smart00736 83 ASDTFTITVVNTN 95
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9095-9656 |
7.77e-04 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 47.12 E-value: 7.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9095 FADNGTYTAILTVTDTAGASTVETLLLNVNNIAPIPKAGADITTDEGTAITFNGSFIDPGIKDTHTITWDFGDGTTATGI 9174
Cdd:COG4935 5 GAGSTTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9175 LNPTHTYNQDGVYTATLTVTDNDGATNSNSLTVTVNNIDPIINDISGDTNINEGATAKFTATATNPSNDTLTYTWNFGDD 9254
Cdd:COG4935 85 PAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9255 TDPVVGQTVNHIFAQDGNYTVTLTVTDTSNGITSETLTVSVNNAAPIITNISGDTNINEGATANFTATATDPGNDSITYT 9334
Cdd:COG4935 165 AAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9335 WDFGNGITKTGENVSHEFADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILD 9414
Cdd:COG4935 245 GGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGS 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9415 THTITWDFGDGTTAEGTLTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDinieeGATATFSAIA 9494
Cdd:COG4935 325 AAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAA-----GAAAGAAAAG 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9495 TDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVT 9574
Cdd:COG4935 400 GVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASST 479
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9575 FNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPT 9654
Cdd:COG4935 480 TAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTTDVAIPDNGPAGVTSTITVSGGGAVED 559
|
..
gi 2711936800 9655 IT 9656
Cdd:COG4935 560 VT 561
|
|
| Hia |
COG5295 |
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, ... |
9777-10417 |
7.84e-04 |
|
Autotransporter adhesin [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 444098 [Multi-domain] Cd Length: 785 Bit Score: 47.07 E-value: 7.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9777 GDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASLRT 9856
Cdd:COG5295 13 ALTTVASGASTTASGSSATVTSAAQSTGSAATSSGSSSAAGGSGSTSSLTAAAATAGAGSGGTSATAASSVASGGASAAT 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9857 VTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDriDEYDETFFLNLSDATNATIADAQAVATILDNDAPP 9936
Cdd:COG5295 93 AASTGTGNTAGTAATVAGAASSGSATNAGASAGASAAAAAGST--AAAGGAAASTGGSSAAGGSNTATATGSSTANAATA 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9937 TLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTISVQLNGDITDEY 10016
Cdd:COG5295 171 AAGATSTSASGSSSGASGAAAASAATGASAGGTASAAASASSSATGTSASVGVNAGAATGSAASAGGSASAGAASGNATT 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10017 DETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDYTTANGTAIAGS 10096
Cdd:COG5295 251 ASASSVSGSAVAAGTASTATTASTTAASGAAGTATAAAGGDAAAAGSASSTGAANATAGGGNAGSGGGGAAALGSAGGSS 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10097 DYKATSGTLSFAPGETSQTIIVEVIGDHNRGADETFAINLSNATNAAIADAQGTGTIVDDDRTDGFAIRAEGTVTINGSG 10176
Cdd:COG5295 331 GVGTASGASAAAATNDGTANGAGTSAAADATSGGGAGGGGAAATSSSGGSATAAGNAAGAAGAGSAGSGGSSTGASAGGG 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10177 DFDGNPLDLYDDTLIYAAKGFNINGNPVLPVKRDAQGNPIRDAQGKLILIENAVAVAPGYTVSNASNSNQYANLVPPQIV 10256
Cdd:COG5295 411 ASAAGGAAAGSAAAGTSSNTSAVGASNGASGTSSSASSAGAAGGGTAGAGGAANVGAATTAASAAATAAAATSSAAIAGA 490
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10257 EPQTIIVPAYASVKQQELERRIPTGATTLTFNMQQNPMNNAADwakkfppSGTASNPTVVRVTGGGLNIPANVSLNNYVI 10336
Cdd:COG5295 491 TATGAGAAAGGAGAGAAGGAGSAAAGGAANAAAASGATATAGS-------AGGGAAAAAGGGSTTAATGTNSVAVGNNTA 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10337 IVEQGDINFNGSGHNLNNVVLVTNNGNVNLSTVQARDLSVLVSGSINMNGGARFAGNTILANGSSQGNITfNGATSTVDE 10416
Cdd:COG5295 564 TGANSVALGAGSVASGANSVSVGAAGAENVAAGATDTDAVNGGGAVATGDNSVAVGNNAQASGANSVALG-AGATATANN 642
|
.
gi 2711936800 10417 S 10417
Cdd:COG5295 643 S 643
|
|
| Dockerin_I |
cd14256 |
Type I dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein ... |
6020-6065 |
8.00e-04 |
|
Type I dockerin repeat domain; Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
Pssm-ID: 271215 [Multi-domain] Cd Length: 57 Bit Score: 41.37 E-value: 8.00e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 2711936800 6020 GDVNRDGLVDGVDSGLLRGAIAfGNYDVTY------DFNRDGVLNAADVQIL 6065
Cdd:cd14256 2 GDVNGDGKVNSADAALLKKYLL-GKITLTEaqlkaaDVNGDGKVNAIDLALL 52
|
|
| PKD_4 |
pfam18911 |
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins. |
5172-5259 |
8.22e-04 |
|
PKD domain; This entry is composed of PKD domains found in bacterial surface proteins.
Pssm-ID: 436824 [Multi-domain] Cd Length: 85 Bit Score: 42.26 E-value: 8.22e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5172 NTTPVLAAIGNSSVAEGQTLNLVLSAS-DADGDTLTYSaTNLPPGAVLDPVQGILTWTpnlsQAGTYnNITLTASD--GN 5248
Cdd:pfam18911 1 NAAPVADAGGDRIVAEGETVTFDASASdDPDGDILSYR-WDFGDGTTATGANVSHTYA----APGTY-TVTLTVTDdsGA 74
|
90
....*....|.
gi 2711936800 5249 KSSSQSFAITV 5259
Cdd:pfam18911 75 SNSTATDTVTV 85
|
|
| Dockerin_1 |
pfam00404 |
Dockerin type I domain; The dockerin repeat is the binding partner of the cohesin domain ... |
6020-6065 |
8.52e-04 |
|
Dockerin type I domain; The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. This family contains two copies of the repeat.
Pssm-ID: 459805 [Multi-domain] Cd Length: 56 Bit Score: 41.02 E-value: 8.52e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 2711936800 6020 GDVNRDGLVDGVDSGLLRGAIAFGNYDVT-----YDFNRDGVLNAADVQIL 6065
Cdd:pfam00404 1 GDVNGDGKVNALDALLLKNYLLGSGTGSSinkkaADVNGDGKVNALDALLL 51
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9352-9897 |
9.77e-04 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 46.74 E-value: 9.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9352 FADEGTYNVTLTVQDSDGAATQETLTVNVSNVAPIVDAGADLTTDEGTAITFNGNFTDPGILDTHTITWDFGDGTTAEGT 9431
Cdd:COG4935 5 GAGSTTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9432 LTPNHVFFNNGVYSVKLTVKDNDGGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDG 9511
Cdd:COG4935 85 PAAATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9512 TDAVIGSNVNHIFADNGNYTVTLTVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTII 9591
Cdd:COG4935 165 AAGGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGV 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9592 WDFGDGTTLEYTPHAPTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAY 9671
Cdd:COG4935 245 GGLGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGS 324
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9672 FSATATDPGNDTLTYTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYI 9751
Cdd:COG4935 325 AAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASA 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9752 GETVAFWGQFTDPGILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDI 9831
Cdd:COG4935 405 AGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAA 484
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9832 SLIEGDDGNAYAVFTASLSEASLRTVTANFATADGTAITGSDYLATTG---------------TITFNPGKTTQTITVAI 9896
Cdd:COG4935 485 AAAAGLATTAAVAAGAAGAAAAAATAASVGGATGAAGTTNSTATFSNTtdvaipdngpagvtsTITVSGGGAVEDVTVTV 564
|
.
gi 2711936800 9897 N 9897
Cdd:COG4935 565 D 565
|
|
| Big_5 |
pfam13205 |
Bacterial Ig-like domain; |
4315-4423 |
1.17e-03 |
|
Bacterial Ig-like domain;
Pssm-ID: 463809 [Multi-domain] Cd Length: 105 Bit Score: 42.36 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4315 VIAPKVAATNPAPDAIVALPQGTISITFDSDMYAGAVNDSTSVlnpanfelVSANGTLTPQSVRYDAKTRTVLLDFNT-L 4393
Cdd:pfam13205 2 TTPPTVVSTTPADGATNVAVNSSITVTFSEAIDPATVNAAVVI--------VLSDGAGVPVTGTVSVDGKTVTITPSAaL 73
|
90 100 110
....*....|....*....|....*....|.
gi 2711936800 4394 TPD-HYSLRVSQNLKSTAGVELTGGYQEQFT 4423
Cdd:pfam13205 74 AANtTYTVTITAGIKDLAGNALAGPYTWSFT 104
|
|
| Peptidase_M10 |
pfam00413 |
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require ... |
233-258 |
1.47e-03 |
|
Matrixin; The members of this family are enzymes that cleave peptides. These proteases require zinc for catalysis.
Pssm-ID: 425668 [Multi-domain] Cd Length: 159 Bit Score: 43.37 E-value: 1.47e-03
|
| Vgb |
COG4257 |
Streptogramin lyase [Defense mechanisms]; |
6841-6934 |
1.53e-03 |
|
Streptogramin lyase [Defense mechanisms];
Pssm-ID: 443399 [Multi-domain] Cd Length: 270 Bit Score: 45.01 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 6841 VARIPVGTDDvvDRPRDIAFTRDGsRAYVTLENSGRIALVDPlflqqidtkpETEEIDTIKLPTAASPRAIVVDNqDQYA 6920
Cdd:COG4257 7 ITEYPVPAPG--SGPRDVAVDPDG-AVWFTDQGGGRIGRLDP----------ATGEFTEYPLGGGSGPHGIAVDP-DGNL 72
|
90
....*....|....
gi 2711936800 6921 YIADGRLGIIYVLD 6934
Cdd:COG4257 73 WFTDNGNNRIGRID 86
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9455-9956 |
1.54e-03 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 45.97 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9455 GGENSDTLTVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTLTYTWDFGDGTDAVIGSNVNHIFADNGNYTVTL 9534
Cdd:COG4935 36 TATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAAPAAATVVGAALGVVAVAGAGLAATASGAAAG 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9535 TVQDPDGAATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPGILDTHTIIWDFGDGTTLEYTPHAPTPPHSPL 9614
Cdd:COG4935 116 AVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVGVAAVAGAAGGGGGVGVAAAVGVVLGAGLVADGGNGGG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9615 TPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLTYTWNFGDGT 9694
Cdd:COG4935 196 GAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGGLGAAATAAAADGGGGGGAGAAGAGGSAGA 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9695 DAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAFWGQFTDPGILDTHTVVW 9774
Cdd:COG4935 276 AAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGA 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9775 DFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVFTASLSEASL 9854
Cdd:COG4935 356 SGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSS 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9855 RTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQAVATILDNDA 9934
Cdd:COG4935 436 TGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGG 515
|
490 500
....*....|....*....|..
gi 2711936800 9935 PPTLTITDKTITESDNGTTTAI 9956
Cdd:COG4935 516 ATGAAGTTNSTATFSNTTDVAI 537
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
2265-2376 |
1.66e-03 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 41.88 E-value: 1.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2265 RPDLQVKSITAPTTANAGGTISLEFVVANEGTvgTTTPNWQDRVYLsldNKISYDDLSLGSfsnaaaLGSGESYrTQANT 2344
Cdd:pfam07705 1 LPDLIVQSISPPSEAYVGEENTITVTVKNQGT--AAAGAFNVALYV---DGTSVGTITVPG------LAAGEST-TVSFS 68
|
90 100 110
....*....|....*....|....*....|..
gi 2711936800 2345 LVIPKYfrGKAYLIVQTDAAGQVDEyPQESNN 2376
Cdd:pfam07705 69 WTPPTE--GSYTLTVVVDPDNTVAE-SNETNN 97
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
4850-4957 |
1.73e-03 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 41.69 E-value: 1.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4850 APIFDNIGTWQVQEGQsvrfrAFAFDPDNPGFVPQDRNADGQLTILEGSDPsviytvsdLPVGATFDPITAMFVWTPGYT 4929
Cdd:pfam05345 1 PPVVTSPADQTATVGT-----PYSFTLSASGGSDPYGGSTVTYSTTATGGA--------LPSGLTLNSSTGTISGTPTSV 67
|
90 100
....*....|....*....|....*...
gi 2711936800 4930 SAGTYNVTFTATDdgnGTGITKATSLTV 4957
Cdd:pfam05345 68 QPGTYTFTVTATD---SSGLSSSTTFTL 92
|
|
| MJ0795 |
COG1361 |
S-layer protein MJ0795, predicted component of type IV pili-like system [General function ... |
1614-1856 |
1.85e-03 |
|
S-layer protein MJ0795, predicted component of type IV pili-like system [General function prediction only];
Pssm-ID: 440972 [Multi-domain] Cd Length: 409 Bit Score: 45.46 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1614 INYKVRVTSDFSDVTGTYTLNSQTK---APDLIVKSVFTPPTASIGQTTDISWTVANTGSLSATQA------WTDRVYLI 1684
Cdd:COG1361 107 IPVTVSYSYGYTDRTETETYTVTVKvegEPRFEVVSVTSPDSLTPGDTGTLTLTIKNTGTGTAKNVtvtltsPSGDLTDL 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1685 KENTNGTFDGVTLPSSAIFLDILRHET--GLAANDEYTTPVRKVLLPEVEDGDYRIVVITDFDNsilegkDENNLRVSEQ 1762
Cdd:COG1361 187 EPGPRPATNVVVVLSSPVSPVGSNSVAlgTLEPGESATFTFKVDVSEDAEPGPYPLPLTVTYRD------EDGDTYSDTV 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 1763 VLSI---GHVDLvpTIIYSPATATSGTTIPLKWSVTNNGSADTVGGwvdRIYLSSDTKFDPSDllltERKYNGSLSSGAT 1839
Cdd:COG1361 261 TIGVyvaPKADF--EVENVESTITAGETVTITITVTNTGNETAKNV---VARLSADDPLSSLD----DEAFIGDLAPGES 331
|
250
....*....|....*..
gi 2711936800 1840 TdelelNIAIPLDVSSD 1856
Cdd:COG1361 332 A-----TVTFTVSASSD 343
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
9606-10152 |
2.55e-03 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 45.20 E-value: 2.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9606 APTPPHSPLTPTHIYADNGIYNVTLTVRDNDGGVTIDTLTVTVNNVGPTITDISGDTNVDEGTPAYFSATATDPGNDTLT 9685
Cdd:COG4935 8 STTGLAAAVLAAAAGTGSAATAEGGAASTATSAAVAGASAAAAAATAVGAGASSLAASAAAAAAAASGAAAGAVDAAPAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9686 YTWNFGDGTDAVVGQNVNHTFADNGIYTVTLTVSDEDGASTTKTLSTKVNNVAPTVAAGDNQIMYIGETVAfWGQFTDPG 9765
Cdd:COG4935 88 ATVVGAALGVVAVAGAGLAATASGAAAGAVAAAANGNTGAGPGSGGTGGGSGGAGAAAAAAALSAAGAAVG-VAAVAGAA 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9766 ILDTHTVVWDFGDSNTVAGTLRPTHIYNSNGTYSVTLTVTDDDGGVTNNTLTVTVKKPPTLSVNDISLIEGDDGNAYAVF 9845
Cdd:COG4935 167 GGGGGVGVAAAVGVVLGAGLVADGGNGGGGAVAGGAAGGGGGGGGGGGLGGAAGGGGAGLAAAGGGGGGAAAAAAAGVGG 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9846 TASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDETFFLNLSDATNATIADAQA 9925
Cdd:COG4935 247 LGAAATAAAADGGGGGGAGAAGAGGSAGAAAGGAGAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAA 326
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9926 VATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNFATANGTAIAGSDYTATSGTLSFAPGETTKTIS 10005
Cdd:COG4935 327 AAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGAGTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10006 VQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGDNGTTYMSFTVSLSVASAKPITVDY 10085
Cdd:COG4935 407 AVGAGTAAGASATAAVSTGAASGSSTTSSTGTTATATGLGGGADAGSTSTGTGSAAGAAGGTTTATSGLASSTTAAAAAA 486
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 10086 TTANGTAIAGSDYKATSGTLSFAPGETSqtiiveviGDHNRGADETFAINLSNATNAAIADAQGTGT 10152
Cdd:COG4935 487 AAGLATTAAVAAGAAGAAAAAATAASVG--------GATGAAGTTNSTATFSNTTDVAIPDNGPAGV 545
|
|
| Big_9 |
pfam17963 |
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains. |
5347-5431 |
2.58e-03 |
|
Bacterial Ig domain; This entry represents a wide variety of bacterial Ig domains.
Pssm-ID: 465590 [Multi-domain] Cd Length: 90 Bit Score: 40.79 E-value: 2.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5347 VTLRVANVNRSPVISVSPHAVALGEKLQFQV-VGTDPDNNTNLTFSAANLPDEA-VLDAATGMFSWMPSPGQVGDYAVTY 5424
Cdd:pfam17963 4 VTVTVTPVNDAPVAVDDSVTVTEDTVLANDSdPDGDPLTITSLTVTIVTAPANGtVTVNADGTLTYTPNAGFSGTDSFTY 83
|
....*..
gi 2711936800 5425 AVSDGET 5431
Cdd:pfam17963 84 TVSDGSG 90
|
|
| COG4733 |
COG4733 |
Phage-related protein, tail protein J [Mobilome: prophages, transposons]; |
9463-10098 |
2.69e-03 |
|
Phage-related protein, tail protein J [Mobilome: prophages, transposons];
Pssm-ID: 443767 [Multi-domain] Cd Length: 978 Bit Score: 45.32 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9463 TVSVNNVAPTITNVAGDINIEEGATATFSAIATDPGNDTlTYTWDFGDGTdavigSNVNHIFADNGNyTVTLTVQDPDGA 9542
Cdd:COG4733 401 VIAVADDVLAGRRIGGRVSSVDGRVVTLDRPVTMEAGDR-YLRVRLPDGT-----SVARTVQSVAGR-TLTVSTAYSETP 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9543 ATQQTLTLSVSNVAPIVNAGADFTTDEGSAVTFNGNFTDPgildthtIIWDFGDGTTLEYTPHAPTPPHSPLTPTHIYAD 9622
Cdd:COG4733 474 EAGAVWAFGPDELETQLFRVVSIEENEDGTYTITAVQHAP-------EKYAAIDAGAFDDVPPQWPPVNVTTSESLSVVA 546
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9623 NGIYNVTLTvrdndggVTIDTLTVTVnnvgptitdisgdtnvdegtpaYFSATATDPGNdtltyTWNFGDGTDavvGQNV 9702
Cdd:COG4733 547 QGTAVTTLT-------VSWDAPAGAV----------------------AYEVEWRRDDG-----NWVSVPRTS---GTSF 589
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9703 NHTFADNGIYTVTLT------VSDEDGASTTKTLSTKVNNVAP----TVAAGDNQImyigetVAFWGQFTDPGIldTHTV 9772
Cdd:COG4733 590 EVPGIYAGDYEVRVRainalgVSSAWAASSETTVTGKTAPPPAptglTATGGLGGI------TLSWSFPVDADT--LRTE 661
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9773 VW-----DFGDSnTVAGTLRPTHIYNSNG-----TYSVTLTVTDDDGGVTNNTLTVTvkkppTLSVNDISLIEGDDGNAY 9842
Cdd:COG4733 662 IRysttgDWASA-TVAQALYPGNTYTLAGlkagqTYYYRARAVDRSGNVSAWWVSGQ-----ASADAAGILDAITGQILE 735
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9843 AVFTASLSEASLRTVTANFATADGTAITGSDYLATTGTITFNPGKTTQTITVAINGDRIDEYDetfflnLSDATNATIAD 9922
Cdd:COG4733 736 TELGQELDAIIQNATVAEVVAATVTDVTAQIDTAVLFAGVATAAAIGAEARVAATVAESATAA------AATGTAADAAG 809
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9923 AQAVATILDNDAPPTLTITDKTITESDNGTTTAIFTVSLDAASGKPVTVNF-ATANGTAIAGSDYTATSGTLSFAPGETT 10001
Cdd:COG4733 810 DASGGVTAGTSGTTGAGDTAASTTRVAAAVVLAGVVVYGDAIIESGNTGDIvATGDIASAAAGAVATTVSGTTAADVSAV 889
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 10002 KTISVQLNGDITDEYDETFFLNLSDATNATITDAQAVGTILDNDAPPVLTINDKTITEGdngttymsFTVSLSVASAKPI 10081
Cdd:COG4733 890 ADSTAASLTAIVIAATTIIDAIGDGTTREPAGDIGASGGAQGFAVTIVGSFDGAGAVAT--------VDAGQSVVDGVGT 961
|
650
....*....|....*..
gi 2711936800 10082 TVDYTTANGTAIAGSDY 10098
Cdd:COG4733 962 AVEAANGTETAAGGGSQ 978
|
|
| He_PIG |
pfam05345 |
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat ... |
9127-9210 |
2.96e-03 |
|
Putative Ig domain; This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.
Pssm-ID: 398814 [Multi-domain] Cd Length: 95 Bit Score: 40.92 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 9127 APIPKAGADITTDEGTAITFNGS---FIDPGIKDTHTITWDFGDGT--------TATGILNPTHTYNQDGVYTATLTVTD 9195
Cdd:pfam05345 1 PPVVTSPADQTATVGTPYSFTLSasgGSDPYGGSTVTYSTTATGGAlpsgltlnSSTGTISGTPTSVQPGTYTFTVTATD 80
|
90
....*....|....*
gi 2711936800 9196 NDGATNSNSLTVTVN 9210
Cdd:pfam05345 81 SSGLSSSTTFTLTVT 95
|
|
| MJ0795 |
COG1361 |
S-layer protein MJ0795, predicted component of type IV pili-like system [General function ... |
2085-2297 |
3.49e-03 |
|
S-layer protein MJ0795, predicted component of type IV pili-like system [General function prediction only];
Pssm-ID: 440972 [Multi-domain] Cd Length: 409 Bit Score: 44.30 E-value: 3.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2085 GALAIGGNYNRSVDVTLPNGI-SGNYYIvvttggPFEFIYTNNNSRISNAIAVTFT----PPPDLTVTNVTSPSNAQSGN 2159
Cdd:COG1361 80 GSLPPGQSVTVTFTVTVPEDAePGTYPI------PVTVSYSYGYTDRTETETYTVTvkveGEPRFEVVSVTSPDSLTPGD 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2160 KIDISWTVANSGTGDA------VGSWTDQVFLKEVGGSE------------QLISLGTFNYGNgLQAGKFYS-RFEQFTL 2220
Cdd:COG1361 154 TGTLTLTIKNTGTGTAknvtvtLTSPSGDLTDLEPGPRPatnvvvvlsspvSPVGSNSVALGT-LEPGESATfTFKVDVS 232
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2711936800 2221 PSTIQGLYEVVVKTNtsnslYENGAinnNTSSTNPNNLLVSLTPRPDLQVKSItaPTTANAGGTISLEFVVANEGTV 2297
Cdd:COG1361 233 EDAEPGPYPLPLTVT-----YRDED---GDTYSDTVTIGVYVAPKADFEVENV--ESTITAGETVTITITVTNTGNE 299
|
|
| CADG |
smart00736 |
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan ... |
4543-4630 |
3.68e-03 |
|
Dystroglycan-type cadherin-like domains; Cadherin-homologous domains present in metazoan dystroglycans and alpha/epsilon sarcoglycans, yeast Axl2p and in a very large protein from magnetotactic bacteria. Likely to bind calcium ions.
Pssm-ID: 214795 [Multi-domain] Cd Length: 97 Bit Score: 40.79 E-value: 3.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 4543 ITSNPVLTAYTGQAYSYQV---TANDPDGAVLGYLL-----YDAPSGMTIDQNTGLITWSPTQQSPVSADVTLQVYDLRG 4614
Cdd:smart00736 1 ANAIGDQTATEGESFSYTIpssTFTDADGDTLTYSAtlsdgSALPSWLSFDSDTGTLSGTPTNSDVGSLSLKVTATDSSG 80
|
90
....*....|....*.
gi 2711936800 4615 AHTTQSFSLNVVGGNH 4630
Cdd:smart00736 81 ASASDTFTITVVNTND 96
|
|
| ZnMc_MMP |
cd04278 |
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are ... |
237-268 |
4.10e-03 |
|
Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate specification, cell migration, tissue repair, tumorigenesis, gain or loss of tissue-specific functions, and apoptosis. In many instances, they are anchored to cell membranes via trans-membrane domains, and their activity is controlled via TIMPs (tissue inhibitors of metalloproteinases).
Pssm-ID: 239805 [Multi-domain] Cd Length: 157 Bit Score: 42.19 E-value: 4.10e-03
10 20 30
....*....|....*....|....*....|...
gi 2711936800 237 SFYVDLLTVVTHEIGHVLGLHHIEA-DQIMSAT 268
Cdd:cd04278 102 SGGTDLFSVAAHEIGHALGLGHSSDpDSIMYPY 134
|
|
| DUF6531 |
pfam20148 |
Domain of unknown function (DUF6531); This putative domain is found in a range of RHS proteins. |
5632-5730 |
6.31e-03 |
|
Domain of unknown function (DUF6531); This putative domain is found in a range of RHS proteins.
Pssm-ID: 466309 [Multi-domain] Cd Length: 74 Bit Score: 39.44 E-value: 6.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 5632 VNTATkpSAYTRTQTDLSitfsstLPDSLPhsLNLIRTYSSlNSDEVGSFGNGWQWaTLDTNIQtnvpltgreslgvyep 5711
Cdd:pfam20148 4 VNVAT--GNKVLEETDFS------LPGPLP--LVWTRTYNS-SSERDGPLGPGWSH-PYDQRLE---------------- 55
|
90
....*....|....*....
gi 2711936800 5712 FRVGTRLYLTTPSGERVGF 5730
Cdd:pfam20148 56 LEGDGGVVYIDADGREVTF 74
|
|
| CARDB |
pfam07705 |
CARDB; Cell adhesion related domain found in bacteria. |
2142-2242 |
8.60e-03 |
|
CARDB; Cell adhesion related domain found in bacteria.
Pssm-ID: 400172 [Multi-domain] Cd Length: 101 Bit Score: 39.95 E-value: 8.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2711936800 2142 PDLTVTNVTSPSNAQSGNKIDISWTVANSGTGDAvGSWTDQVFLKEVGGSEQLISlgtfnygnGLQAGKFYSRFeqFTLP 2221
Cdd:pfam07705 2 PDLIVQSISPPSEAYVGEENTITVTVKNQGTAAA-GAFNVALYVDGTSVGTITVP--------GLAAGESTTVS--FSWT 70
|
90 100
....*....|....*....|.
gi 2711936800 2222 STIQGLYEVVVKTNTSNSLYE 2242
Cdd:pfam07705 71 PPTEGSYTLTVVVDPDNTVAE 91
|
|
| |
