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Conserved domains on  [gi|2726639393|ref|WP_342878783|]
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DUF1570 domain-containing protein [Pseudoalteromonas sp. AS71]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1570 super family cl24197
Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula ...
 230-323 2.36e-05

Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula baltica. This family carries a highly conserved HExxH sequence motif characteriztic of members of the Peptidase clan MA.


The actual alignment was detected with superfamily member pfam07607:

Pssm-ID: 284926  Cd Length: 129  Bit Score: 43.73  E-value: 2.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2726639393 230 TAVHEAVH--AINKAV---LGYTPRWFNEGFAEYFELTKnnmqtaiVEPNSSWTKNNNITKSvfSIGSLVGLDDSWKKGD 304
Cdd:pfam07607   4 TVRHEAVHqlAYNCGVqsrVNDTPMWVSEGLAQFFEPDA-------MSSGASWTGLGRVNKD--RVRQFRETISMERPGD 74

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2726639393 305 TSKL------------------YASSWAAIYFLMDTQ 323
Cdd:pfam07607  75 VARWrmivsddlfrnpttihtaYALAWALTHYLAERQ 111
 
Name Accession Description Interval E-value
DUF1570 pfam07607
Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula ...
 230-323 2.36e-05

Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula baltica. This family carries a highly conserved HExxH sequence motif characteriztic of members of the Peptidase clan MA.


Pssm-ID: 284926  Cd Length: 129  Bit Score: 43.73  E-value: 2.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2726639393 230 TAVHEAVH--AINKAV---LGYTPRWFNEGFAEYFELTKnnmqtaiVEPNSSWTKNNNITKSvfSIGSLVGLDDSWKKGD 304
Cdd:pfam07607   4 TVRHEAVHqlAYNCGVqsrVNDTPMWVSEGLAQFFEPDA-------MSSGASWTGLGRVNKD--RVRQFRETISMERPGD 74

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2726639393 305 TSKL------------------YASSWAAIYFLMDTQ 323
Cdd:pfam07607  75 VARWrmivsddlfrnpttihtaYALAWALTHYLAERQ 111
 
Name Accession Description Interval E-value
DUF1570 pfam07607
Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula ...
 230-323 2.36e-05

Protein of unknown function (DUF1570); A family of hypothetical proteins in Rhodopirellula baltica. This family carries a highly conserved HExxH sequence motif characteriztic of members of the Peptidase clan MA.


Pssm-ID: 284926  Cd Length: 129  Bit Score: 43.73  E-value: 2.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2726639393 230 TAVHEAVH--AINKAV---LGYTPRWFNEGFAEYFELTKnnmqtaiVEPNSSWTKNNNITKSvfSIGSLVGLDDSWKKGD 304
Cdd:pfam07607   4 TVRHEAVHqlAYNCGVqsrVNDTPMWVSEGLAQFFEPDA-------MSSGASWTGLGRVNKD--RVRQFRETISMERPGD 74

                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 2726639393 305 TSKL------------------YASSWAAIYFLMDTQ 323
Cdd:pfam07607  75 VARWrmivsddlfrnpttihtaYALAWALTHYLAERQ 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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