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Conserved domains on  [gi|2734468674|ref|WP_346657770|]
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aminotransferase class III-fold pyridoxal phosphate-dependent enzyme, partial [Bacillus cereus group sp. BfR-BA-01355]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AAT_I super family cl18945
Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP) ...
 1-67 2.47e-36

Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V).


The actual alignment was detected with superfamily member PRK06918:

Pssm-ID: 450240 [Multi-domain]  Cd Length: 451  Bit Score: 126.08  E-value: 2.47e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQACYEQTNIA 67
Cdd:PRK06918  385 TKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKANTA 451
 
Name Accession Description Interval E-value
PRK06918 PRK06918
4-aminobutyrate aminotransferase; Reviewed
 1-67 2.47e-36

4-aminobutyrate aminotransferase; Reviewed


Pssm-ID: 235885 [Multi-domain]  Cd Length: 451  Bit Score: 126.08  E-value: 2.47e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQACYEQTNIA 67
Cdd:PRK06918  385 TKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKANTA 451
ArgD COG0160
Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and ...
 1-59 4.60e-24

Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and metabolism]; Acetylornithine aminotransferase/4-aminobutyrate aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439930 [Multi-domain]  Cd Length: 429  Bit Score: 92.43  E-value: 4.60e-24
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:COG0160   371 TKEPAPELAAAVVARAFERGLLLLTCGPYGNVLRFLPPLTITDEELDEGLDILEEALAA 429
OAT_like cd00610
Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP) ...
 1-57 3.01e-13

Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.


Pssm-ID: 99735 [Multi-domain]  Cd Length: 413  Bit Score: 62.20  E-value: 3.01e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGtyGNVIRVLMPLIITDEQLEEGLTIIEESL 57
Cdd:cd00610   359 TKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEIDEGLDALDEAL 413
Aminotran_3 pfam00202
Aminotransferase class-III;
4-54 6.24e-08

Aminotransferase class-III;


Pssm-ID: 395148 [Multi-domain]  Cd Length: 397  Bit Score: 46.94  E-value: 6.24e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2734468674   4 PDKTLTANLCAEANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGLTIIE 54
Cdd:pfam00202 347 EDVTVNPPILLAALEAGVLILPCGD--NVIRLLPPLTITDEQIDEGLEIIS 395
 
Name Accession Description Interval E-value
PRK06918 PRK06918
4-aminobutyrate aminotransferase; Reviewed
 1-67 2.47e-36

4-aminobutyrate aminotransferase; Reviewed


Pssm-ID: 235885 [Multi-domain]  Cd Length: 451  Bit Score: 126.08  E-value: 2.47e-36
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQACYEQTNIA 67
Cdd:PRK06918  385 TKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEKANTA 451
ArgD COG0160
Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and ...
 1-59 4.60e-24

Acetylornithine aminotransferase/4-aminobutyrate aminotransferase [Amino acid transport and metabolism]; Acetylornithine aminotransferase/4-aminobutyrate aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 439930 [Multi-domain]  Cd Length: 429  Bit Score: 92.43  E-value: 4.60e-24
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:COG0160   371 TKEPAPELAAAVVARAFERGLLLLTCGPYGNVLRFLPPLTITDEELDEGLDILEEALAA 429
PRK06058 PRK06058
4-aminobutyrate--2-oxoglutarate transaminase;
1-59 2.63e-20

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 235685 [Multi-domain]  Cd Length: 443  Bit Score: 82.00  E-value: 2.63e-20
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK06058  384 TTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALAD 442
PRK08088 PRK08088
4-aminobutyrate--2-oxoglutarate transaminase;
4-59 1.17e-17

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236149 [Multi-domain]  Cd Length: 425  Bit Score: 74.45  E-value: 1.17e-17
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2734468674   4 PDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK08088  368 PNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423
PRK09264 PRK09264
diaminobutyrate--2-oxoglutarate transaminase;
4-59 5.32e-14

diaminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236437 [Multi-domain]  Cd Length: 425  Bit Score: 64.42  E-value: 5.32e-14
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 2734468674   4 PDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK09264  361 GDGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAE 416
OAT_like cd00610
Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP) ...
 1-57 3.01e-13

Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.


Pssm-ID: 99735 [Multi-domain]  Cd Length: 413  Bit Score: 62.20  E-value: 3.01e-13
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGtyGNVIRVLMPLIITDEQLEEGLTIIEESL 57
Cdd:cd00610   359 TKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEIDEGLDALDEAL 413
PRK07495 PRK07495
4-aminobutyrate--2-oxoglutarate transaminase;
1-60 1.98e-12

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 236032 [Multi-domain]  Cd Length: 425  Bit Score: 59.76  E-value: 1.98e-12
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQAC 60
Cdd:PRK07495  363 SGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEA 422
PRK05639 PRK05639
acetyl ornithine aminotransferase family protein;
1-58 4.83e-12

acetyl ornithine aminotransferase family protein;


Pssm-ID: 168145 [Multi-domain]  Cd Length: 457  Bit Score: 58.79  E-value: 4.83e-12
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQ 58
Cdd:PRK05639  385 NGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIK 442
PRK05769 PRK05769
acetyl ornithine aminotransferase family protein;
2-59 2.08e-11

acetyl ornithine aminotransferase family protein;


Pssm-ID: 235599 [Multi-domain]  Cd Length: 441  Bit Score: 56.85  E-value: 2.08e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2734468674   2 KAPDKTLTANLCAEANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK05769  384 KEPDPKLRDKVLYEAFKRGLLLLGAGK--SAIRIIPPLIITEEEADIGLEILEEAIKE 439
PRK06777 PRK06777
4-aminobutyrate--2-oxoglutarate transaminase;
1-57 7.92e-11

4-aminobutyrate--2-oxoglutarate transaminase;


Pssm-ID: 180690 [Multi-domain]  Cd Length: 421  Bit Score: 55.20  E-value: 7.92e-11
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESL 57
Cdd:PRK06777  363 TGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLL 419
ArgD COG4992
Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase [Amino acid transport and ...
 10-59 1.52e-10

Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase [Amino acid transport and metabolism]; Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase is part of the Pathway/BioSystem: Arginine biosynthesis


Pssm-ID: 444016 [Multi-domain]  Cd Length: 396  Bit Score: 54.28  E-value: 1.52e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 2734468674  10 ANLCAEANKRGLLLLSAGtyGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:COG4992   346 AEVVKALLEEGLLVNAAG--PNVIRLLPPLIITEEEIDEALAALEEALAE 393
PRK09792 PRK09792
4-aminobutyrate transaminase; Provisional
 1-58 2.90e-10

4-aminobutyrate transaminase; Provisional


Pssm-ID: 182078 [Multi-domain]  Cd Length: 421  Bit Score: 53.88  E-value: 2.90e-10
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQ 58
Cdd:PRK09792  363 TGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420
PRK06938 PRK06938
diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
 14-59 1.36e-09

diaminobutyrate--2-oxoglutarate aminotransferase; Provisional


Pssm-ID: 235892 [Multi-domain]  Cd Length: 464  Bit Score: 51.95  E-value: 1.36e-09
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*.
gi 2734468674  14 AEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK06938  415 RECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAA 460
PLN00144 PLN00144
acetylornithine transaminase
 9-59 8.13e-09

acetylornithine transaminase


Pssm-ID: 177748 [Multi-domain]  Cd Length: 382  Bit Score: 49.70  E-value: 8.13e-09
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2734468674   9 TANLCAEANKRGLLLLSAGTyGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PLN00144  331 AGPLVDACRDSGLLVLTAGK-GDVVRLVPPLVISEAELEQAVEILADCLPA 380
PRK08593 PRK08593
aspartate aminotransferase family protein;
1-59 1.87e-08

aspartate aminotransferase family protein;


Pssm-ID: 181493 [Multi-domain]  Cd Length: 445  Bit Score: 48.54  E-value: 1.87e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLLSAGtyGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK08593  373 LKTRDNEAALKICNYCFEHGVVIIAVA--GNVLRFQPPLVITYEQLDTALNTIEQAFTA 429
PRK02627 PRK02627
acetylornithine aminotransferase; Provisional
 10-58 2.28e-08

acetylornithine aminotransferase; Provisional


Pssm-ID: 235056 [Multi-domain]  Cd Length: 396  Bit Score: 48.20  E-value: 2.28e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
gi 2734468674  10 ANLCAEANKRGLLLLSAGtyGNVIRVLMPLIITDEQLEEGLTIIEESLQ 58
Cdd:PRK02627  347 AEIVKKALEKGLLINVTG--DNVLRLLPPLIISKEEIDEAVDRLEEVLK 393
argD PRK02936
acetylornithine transaminase;
10-57 2.44e-08

acetylornithine transaminase;


Pssm-ID: 179505 [Multi-domain]  Cd Length: 377  Bit Score: 48.42  E-value: 2.44e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2734468674  10 ANLCAEANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGLTIIEESL 57
Cdd:PRK02936  332 APVIEQLREEGLLVLSAGP--NVIRLLPPLVVTKEELDQAVYLLKKVL 377
Aminotran_3 pfam00202
Aminotransferase class-III;
4-54 6.24e-08

Aminotransferase class-III;


Pssm-ID: 395148 [Multi-domain]  Cd Length: 397  Bit Score: 46.94  E-value: 6.24e-08
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 2734468674   4 PDKTLTANLCAEANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGLTIIE 54
Cdd:pfam00202 347 EDVTVNPPILLAALEAGVLILPCGD--NVIRLLPPLTITDEQIDEGLEIIS 395
PTZ00125 PTZ00125
ornithine aminotransferase-like protein; Provisional
 5-59 1.18e-07

ornithine aminotransferase-like protein; Provisional


Pssm-ID: 240281 [Multi-domain]  Cd Length: 400  Bit Score: 46.21  E-value: 1.18e-07
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2734468674   5 DKTLTANLCAEANKRGLLLLSagTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PTZ00125  343 DGVNAWDLCLKLKENGLLAKP--THDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395
argD PRK01278
acetylornithine transaminase protein; Provisional
 22-60 4.29e-07

acetylornithine transaminase protein; Provisional


Pssm-ID: 179270 [Multi-domain]  Cd Length: 389  Bit Score: 44.83  E-value: 4.29e-07
                          10        20        30
                  ....*....|....*....|....*....|....*....
gi 2734468674  22 LLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQAC 60
Cdd:PRK01278  351 GLLTVGAGDNVVRLLPPLIITEEEIDEALERLERAAESL 389
PRK08360 PRK08360
aspartate aminotransferase family protein;
1-58 3.31e-06

aspartate aminotransferase family protein;


Pssm-ID: 181401 [Multi-domain]  Cd Length: 443  Bit Score: 42.07  E-value: 3.31e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2734468674   1 TKAPDKTLTANLCAEANKRGLLLlsAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQ 58
Cdd:PRK08360  370 TKERAYEEAAKVVWRAWELGLIV--TFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIE 425
BioA COG0161
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme transport and metabolism]; ...
 3-59 5.64e-06

Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme transport and metabolism]; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase is part of the Pathway/BioSystem: Biotin biosynthesis


Pssm-ID: 439931 [Multi-domain]  Cd Length: 446  Bit Score: 41.58  E-value: 5.64e-06
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 2734468674   3 APDKTLTANLCAEANKRGLLLlsaGTYGNVIrVLMP-LIITDEQLEEGLTIIEESLQA 59
Cdd:COG0161   390 DPEGRVGARVYAAALERGLIL---RPLGDTI-YLMPpLIITEEEIDELVDALREALDE 443
PRK06082 PRK06082
aspartate aminotransferase family protein;
30-67 3.45e-05

aspartate aminotransferase family protein;


Pssm-ID: 180390 [Multi-domain]  Cd Length: 459  Bit Score: 39.32  E-value: 3.45e-05
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 2734468674  30 GNVIRVLMPLIITDEQLEEGLTIIEESLQACYEQTNIA 67
Cdd:PRK06082  422 GNVIQLSPPLIITREELTQALAILEEAIAKICQDFNYS 459
PLN02624 PLN02624
ornithine-delta-aminotransferase
 11-58 8.85e-04

ornithine-delta-aminotransferase


Pssm-ID: 215335 [Multi-domain]  Cd Length: 474  Bit Score: 35.52  E-value: 8.85e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*...
gi 2734468674  11 NLCAEANKRGLLllSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQ 58
Cdd:PLN02624  398 DVCLKLKERGLL--AKPTHDTIIRLAPPLSISEDELQECSKALSDVLE 443
argD PRK04013
acetylornithine/acetyl-lysine aminotransferase; Provisional
 6-62 1.33e-03

acetylornithine/acetyl-lysine aminotransferase; Provisional


Pssm-ID: 101376 [Multi-domain]  Cd Length: 364  Bit Score: 34.90  E-value: 1.33e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 2734468674   6 KTLTANLCAEANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGLTIIEESLQACYE 62
Cdd:PRK04013  309 KKPVGKYVEELQNRGYLVHTAGQ--RVIRLLPPLIISKDTMEEAKSAIEGVINDILG 363
argD PRK05093
acetylornithine/succinyldiaminopimelate transaminase;
16-50 1.41e-03

acetylornithine/succinyldiaminopimelate transaminase;


Pssm-ID: 179933 [Multi-domain]  Cd Length: 403  Bit Score: 34.90  E-value: 1.41e-03
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 2734468674  16 ANKRGLLLLSAGTygNVIRVLMPLIITDEQLEEGL 50
Cdd:PRK05093  359 AAEEGVMVLVAGP--DVLRFAPSLVIEEADIDEGL 391
PRK06148 PRK06148
hypothetical protein; Provisional
 1-59 3.33e-03

hypothetical protein; Provisional


Pssm-ID: 180426 [Multi-domain]  Cd Length: 1013  Bit Score: 33.84  E-value: 3.33e-03
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*....
gi 2734468674    1 TKAPDKTLTANLCAEANKRGLLLLSAGTYGNVIRVLMPLIITDEQLEEGLTIIEESLQA 59
Cdd:PRK06148   952 TKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAA 1010
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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