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Conserved domains on  [gi|2740584761|ref|WP_348983371|]
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MULTISPECIES: DUF6482 family protein [unclassified Vibrio]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6482 super family cl45466
Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. ...
 37-101 1.65e-18

Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


The actual alignment was detected with superfamily member pfam20090:

Pssm-ID: 437922  Cd Length: 101  Bit Score: 74.11  E-value: 1.65e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2740584761  37 LLIESFEGGIYLAYQVVGEQKRLIKDNHQHPMKFLSVNQARDHFSDQGVASAMLVHNSAYDEMCG 101
Cdd:pfam20090  17 LIIHSLEMSLYQVSVVIDGEEHLVYDDDGKPLRFRSLLEIRELLAGLPVESAVLRHQSAYDEMIG 81
 
Name Accession Description Interval E-value
DUF6482 pfam20090
Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. ...
 37-101 1.65e-18

Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


Pssm-ID: 437922  Cd Length: 101  Bit Score: 74.11  E-value: 1.65e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2740584761  37 LLIESFEGGIYLAYQVVGEQKRLIKDNHQHPMKFLSVNQARDHFSDQGVASAMLVHNSAYDEMCG 101
Cdd:pfam20090  17 LIIHSLEMSLYQVSVVIDGEEHLVYDDDGKPLRFRSLLEIRELLAGLPVESAVLRHQSAYDEMIG 81
 
Name Accession Description Interval E-value
DUF6482 pfam20090
Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. ...
 37-101 1.65e-18

Family of unknown function (DUF6482); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.


Pssm-ID: 437922  Cd Length: 101  Bit Score: 74.11  E-value: 1.65e-18
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2740584761  37 LLIESFEGGIYLAYQVVGEQKRLIKDNHQHPMKFLSVNQARDHFSDQGVASAMLVHNSAYDEMCG 101
Cdd:pfam20090  17 LIIHSLEMSLYQVSVVIDGEEHLVYDDDGKPLRFRSLLEIRELLAGLPVESAVLRHQSAYDEMIG 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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