|
Name |
Accession |
Description |
Interval |
E-value |
| LytD |
COG4193 |
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]; |
697-1060 |
7.94e-40 |
|
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism];
Pssm-ID: 443347 [Multi-domain] Cd Length: 423 Bit Score: 153.59 E-value: 7.94e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 697 NGETVTIIGKENGWAKIRFNGGEGYVSLQFLKVKQGSSSYEIVTSSQKVQKPNEAEATQIMQNMKEDAYIKSDGKVVNMK 776
Cdd:COG4193 46 GGNVSTASYVGNVTGIVTTSYGNAYAAASAQKSSAGTLVGAGNVGIIKYYKKSGVVSIKAGGNSLTKASVGEKSYSITNG 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 777 QGFVRANGVINIYDITTGKKLTYVKGGADLKFVKavddriHVQIDGMTGYVNINDVTLHPTMTGEKTSYYATKNGKLYHY 856
Cdd:COG4193 126 KYTNTTDSLVYVTYAKYFGPESYYTYLLSLLYKQ------LSSVGGVAVYVDADWLNVIPTESVPGGNLKHNSYNHSLKS 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 857 VYNPENGKHATYQIGNAPKHLKEGERYEAFDKKQIGGqDSYQYFEYMPLRATSTYTGDEIDNFLRKSNAKSPLIGLGKYF 936
Cdd:COG4193 200 AAAKQYSYSWMYYDGGGWYSASGSDIAYYMDPRNFLN-DEYNYFQFLDLRYSSNYSAEELNKYLKGTFTKGILIGKGQAF 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 937 VSAAEKYKMNAGYLVSHAILESGWGTSRIA-------QDKKNLFGFRAVDSDPYNGAT------GFKTWEEGIDFCAAYI 1003
Cdd:COG4193 279 IEAAKKYGVNPLYLASHALLETGNGTSKLAkgvevngKTYYNLFGIGAYDSNPLENGAkyaykqGWTSPEKAIVGGAKFI 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 1004 DKHYLNPS---GNTYNGGNLGDKAQGMNVMYASDENWGQQIASLMYRIDAMngSKDLNKY 1060
Cdd:COG4193 359 GSNYINNTgygQNTLYKMRWNPVNPGTNHQYATDPFWAEKIAGHMYRAYKK--LKDYNLY 416
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
279-410 |
1.23e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.89 E-value: 1.23e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 279 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINY-QGKEGYVSLEFVKLEAGKQEEKPAEnitngtq 357
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 358 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGkEGYV 410
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
591-722 |
1.31e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.51 E-value: 1.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 591 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKVNGWAKINY-QGKEGYVSLEFITigkdsidptnptnpgqVTE 669
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLT----------------VTP 67
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 670 ERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRFNgGEGYV 722
Cdd:COG3103 68 SARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYR-GTGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
357-488 |
1.58e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.51 E-value: 1.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 357 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISY-QGKEGYVSLEFVKLEAGKQEEKPAEnitngtq 435
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 436 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 488
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
435-566 |
2.05e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.12 E-value: 2.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 435 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINY-QGKEGYVSLEFVKLEAGKQEEKPAEditngtq 513
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 514 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 566
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
193-332 |
6.84e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 100.58 E-value: 6.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 193 AQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISY-QGKEGYVSLEFVKIdgnteeikkpeqpktsd 271
Cdd:COG3103 3 AETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTV----------------- 65
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 272 atikngTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 332
Cdd:COG3103 66 ------TPSARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
109-247 |
1.62e-24 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 99.43 E-value: 1.62e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 109 QKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEY-KGKEGYVSLEFLKFGDAiqtpdtsgqkqlqp 187
Cdd:COG3103 3 AETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPS-------------- 68
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 188 iikngaqeVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGkEGYV 247
Cdd:COG3103 69 --------ARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
27-163 |
4.31e-23 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 95.58 E-value: 4.31e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 27 AESDNLATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISH-DGKEGYVTLQFLgfsngnpnveqkqqlti 105
Cdd:COG3103 1 AAAETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYL----------------- 63
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2753367523 106 nNGQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEYKGkEGYV 163
Cdd:COG3103 64 -TVTPSARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
112-513 |
9.94e-20 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 93.69 E-value: 9.94e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 112 EGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEYKGKEGYVSLEFLKfgdaiqtpdtsgqkqlqpiikn 191
Cdd:NF040676 25 ETIVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTK---------------------- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 192 gaqEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKA-NGWAKISYQGKEGYVSLEFVKIDGNTEeiKKPEQPKTS 270
Cdd:NF040676 83 ---DVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLSSTAPTE--KKADEKTKQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 271 DATIKNGTQEvgTINATSLRVRSAANTsSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYVSLEFVKLEAGKQEEKPAE 350
Cdd:NF040676 158 VAKVQKSVKA--KEEAKTQKVAKAKET-TKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPKEEVKVQEEVKPKEEEKVQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 351 NITNGTQEVgtinatslRVRSAANTsssvlgnlKNGEKVTVLGKANGWAKIS--YQGKEGYVSLEFVKleagKQEEKPAE 428
Cdd:NF040676 235 EIVKPKEEA--------KVQEEVKV--------KEEAKVQEIAKAKEEAKAQeiAKAKEEAKAQEIAK----AKEEAKAQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 429 NITNGTQEVGTINATSLRVRSAANTsssvLGNLKNGEKVTVLGKANGWAKIN--YQGKEGYVSLEFVKleaGKQEEKPAE 506
Cdd:NF040676 295 EIAKAKEEEKAQEIAKAKEEAKARE----IAKAKEEEKAREIAKAKEEAKAReiAKAKEEAKAREIAK---AKEEERAKE 367
|
....*..
gi 2753367523 507 DITNGTQ 513
Cdd:NF040676 368 ASKNNIQ 374
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
15-435 |
2.85e-19 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 92.54 E-value: 2.85e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 15 ATATSFiSMHAFAESDNLAT-VNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISHDGKEGYVTLQFlgfsng 93
Cdd:NF040676 8 ATATVF-GLGAFTTTATAETiVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEF------ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 94 npnveqkqqltinngQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKA-NGWAKIEYKGKEGYVSLEFLKFGD 172
Cdd:NF040676 81 ---------------TKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLSSTA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 173 AIQTPDTSGQKQLQPIIKNgaqevgtinatslrVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGKegyvslefV 252
Cdd:NF040676 146 PTEKKADEKTKQVAKVQKS--------------VKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVK--------P 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 253 KIDGNTEEIKKPEQPKTSDATIK----NGTQEVgtinatsLRVRSAANTSSSVlgNLKNGEKVTVLGKANGWAKIN--YQ 326
Cdd:NF040676 204 KEEPKVQEIVKPKEEVKVQEEVKpkeeEKVQEI-------VKPKEEAKVQEEV--KVKEEAKVQEIAKAKEEAKAQeiAK 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 327 GKEGYVSLEFVKleagKQEEKPAENITNGTQEVGTINATSLRVRSAANTsssvLGNLKNGEKVTVLGKANGWAKIS--YQ 404
Cdd:NF040676 275 AKEEAKAQEIAK----AKEEAKAQEIAKAKEEEKAQEIAKAKEEAKARE----IAKAKEEEKAREIAKAKEEAKAReiAK 346
|
410 420 430
....*....|....*....|....*....|.
gi 2753367523 405 GKEGYVSLEFVKleaGKQEEKPAENITNGTQ 435
Cdd:NF040676 347 AKEEAKAREIAK---AKEEERAKEASKNNIQ 374
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
509-772 |
4.44e-19 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 91.77 E-value: 4.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 509 TNGTQEVgTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYVSLEFvkleagkqeekpaeditn 588
Cdd:NF040676 20 TTATAET-IVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEF------------------ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 589 gTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKV-NGWAKINYQGKEGYVSLEFITigkdSIDPTNpTNPGQV 667
Cdd:NF040676 81 -TKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLS----STAPTE-KKADEK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 668 TEERAVVNASllnVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRfnggegyvslQFLKVKQGSSSYEIV-----TSS 742
Cdd:NF040676 155 TKQVAKVQKS---VKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQ----------EVVKPKEEPKVQEIVkpkeeVKV 221
|
250 260 270
....*....|....*....|....*....|
gi 2753367523 743 QKVQKPNEAEATQIMQNMKEDAYIKSDGKV 772
Cdd:NF040676 222 QEEVKPKEEEKVQEIVKPKEEAKVQEEVKV 251
|
|
| Glucosaminidase |
pfam01832 |
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ... |
933-1005 |
3.39e-14 |
|
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.
Pssm-ID: 460354 [Multi-domain] Cd Length: 91 Bit Score: 69.14 E-value: 3.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 933 GKYFVSAAEKYKMNAGYLVSHAILESGWGTSRIAQDKKNLFGF-------RAVDSDPYNGATGFK---TWEEGIDfcAAY 1002
Cdd:pfam01832 1 APAAIEAAKKYGIPASVLLAQAALESGWGTSRLAKESNNLFGIkaswkgkVAYDTDEVTVAARFRkydSVEESIR--DYY 78
|
...
gi 2753367523 1003 IDK 1005
Cdd:pfam01832 79 AEK 81
|
|
| LYZ2 |
smart00047 |
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes. |
925-1056 |
1.45e-12 |
|
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
Pssm-ID: 214488 [Multi-domain] Cd Length: 147 Bit Score: 66.31 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 925 AKSPLIGLGKYFVSAAEKYKMNAGY---LVSHAILESGWGTSRIAQDKKNLFGF-RAVDSDPYNGAT------GFKTWEE 994
Cdd:smart00047 5 GGSTLEFVGKIFNEAQKAYQINGVYpsiLIAQAALESGWGTSKLAKKYNNLFGIkGAYDGRPVRMGTleylngGWVTVKA 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 995 GI--DFCAAYIDKHYLNPSGNTYNGGNLGDKAQGmNVMYASDENWGQQIASLMYRIDAMNGSKD 1056
Cdd:smart00047 85 AFrgYFGEKFIDYAYVLRGQNPLYKKRWGSNALQ-TAGYATDPDYAKKLIRIIALYDEKLKGYD 147
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
599-650 |
2.98e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.57 E-value: 2.98e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 599 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKVNG-WAKI-NYQGKEGYVSLEFIT 650
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
521-572 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 521 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 572
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
443-494 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 443 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 494
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
287-338 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 287 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 338
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
202-253 |
5.10e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 58.80 E-value: 5.10e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 202 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-SYQGKEGYVSLEFVK 253
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
118-169 |
2.48e-10 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 56.87 E-value: 2.48e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 118 TRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANG-WAKI-EYKGKEGYVSLEFLK 169
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
38-88 |
5.76e-10 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 55.72 E-value: 5.76e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 38 TNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKI-SHDGKEGYVTLQFL 88
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYL 53
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
280-339 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 280 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 339
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
436-495 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 436 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 495
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
514-573 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 514 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 573
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
195-253 |
1.88e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 51.95 E-value: 1.88e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 195 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKISYQ-GKEGYVSLEFVK 253
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVN 62
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
592-645 |
2.57e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 51.56 E-value: 2.57e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2753367523 592 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKVN-GWAKINYQ-GKEGYVS 645
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVP 57
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
110-169 |
2.03e-07 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 48.87 E-value: 2.03e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 110 KEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKAN-GWAKIEYK-GKEGYVSLEFLK 169
Cdd:smart00287 1 SETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVN 62
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
181-314 |
5.89e-07 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 53.27 E-value: 5.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 181 GQK-QLQPIIKNGAQEvGTINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKISY-QGKEGYVSLEF------ 251
Cdd:PRK13914 66 GQKlQVNEVAAAEKTE-KSVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYltdkvt 144
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 252 ---------VKIDGNTEEIKKPEQPKTSdatIKNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVL 314
Cdd:PRK13914 145 stpvaptqeVKKETTTQQAAPAAETKTE---VKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
361-457 |
2.34e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 51.34 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 361 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKISY-QGKEGYVSLEFVKleagkqeEKPAENITNGTQEVG 438
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 439 TiNATSLRVRSAANTSSSV 457
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
99-398 |
5.25e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.57 E-value: 5.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 99 QKQQLT-INNGQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTV-LGKANGWAKIEY-KGKEGYVSLEFLkfGDAI- 174
Cdd:PRK13914 67 QKLQVNeVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYL--TDKVt 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 175 QTPDTSGQ--------KQLQPIIKNGAQEVGTINATSLRVRSAANTSSSVLG------NLKNGEKVTVLGKANGwakISY 240
Cdd:PRK13914 145 STPVAPTQevkketttQQAAPAAETKTEVKQTTQATTPAPKVAETKETPVVDqnatthAVKSGDTIWALSVKYG---VSV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 241 QGKEGYVSLEFVKID-GNTEEIKKPEQPKTSDATIKNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG 319
Cdd:PRK13914 222 QDIMSWNNLSSSSIYvGQKLAIKQTANTATPKAEVKTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPKAPTEA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 320 WAKINYQGKEGYVSLEFVKLEAGKQEEK---PAENITNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN 396
Cdd:PRK13914 302 AKPAPAPSTNTNANKTNTNTNTNTNNTNtstPSKNTNTNTNSNTNTNSNTNANQGSSNNNSNSSASAIIAEAQKHLGKAY 381
|
..
gi 2753367523 397 GW 398
Cdd:PRK13914 382 SW 383
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
439-535 |
5.58e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.19 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 439 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKINY-QGKEGYVSLEFVKleagkqeEKPAEDITNGTQEVG 516
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 517 TiNATSLRVRSAANTSSSV 535
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
517-613 |
5.58e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.19 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 517 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKINY-QGKEGYVSLEFVKleagkqeEKPAEDITNGTQEVG 594
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 595 TiNATSLRVRSAANTSSSV 613
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
29-112 |
1.12e-05 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 47.31 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 29 SDNLATvnatnlNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKI-SHDGKEGYVTLQFLgfSNGNPNVEQ----KQQ 102
Cdd:TIGR04211 3 SDELFV------YMRSGPGNQYRILGSLKSGTPVTVLERSEDgYSRVrTPKGREGWVLSRYL--SDTPSARERlpelQQE 74
|
90
....*....|
gi 2753367523 103 LTINNGQKEE 112
Cdd:TIGR04211 75 LAELQEELAE 84
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
595-677 |
1.35e-05 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 49.03 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 595 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKVNGWAKINY-QGKEGYVSLEFITigkDSIDPTNPTNPGQVTEERA 672
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT---DKVTSTPVAPTQEVKKETT 159
|
....*
gi 2753367523 673 VVNAS 677
Cdd:PRK13914 160 TQQAA 164
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
33-84 |
2.42e-04 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 40.39 E-value: 2.42e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 33 ATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKISHD-GKEGYVT 84
Cdd:smart00287 4 AVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGQdWAKITYGsGQRGYVP 57
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
34-127 |
8.10e-04 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 43.25 E-value: 8.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 34 TVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKISH-DGKEGYVTLQFLGFSNGNPNVEQKQQLTINNGQKE 111
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNgWHKITYnDGKTGFVNGKYLTDKVTSTPVAPTQEVKKETTTQQ 162
|
90
....*....|....*.
gi 2753367523 112 EGIVTATRLNVRNSPT 127
Cdd:PRK13914 163 AAPAAETKTEVKQTTQ 178
|
|
| sporang_Gsm |
NF038016 |
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ... |
679-723 |
1.70e-03 |
|
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.
Pssm-ID: 411609 [Multi-domain] Cd Length: 312 Bit Score: 42.04 E-value: 1.70e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2753367523 679 LNVRKGPSTGAAAVGHLKNGETVTIIGKENG------------WAKIrfnGGEGYVS 723
Cdd:NF038016 1 LNVRSGPATDSAVVGTLANGAKVTVVCKVRGeqirgtvrttsqWDRL---GSGRYVS 54
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
447-507 |
1.96e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 40.76 E-value: 1.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 447 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKINY-QGKEGYVSLEFVkleagkQEEKPAED 507
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSARE 66
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
525-585 |
1.96e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 40.76 E-value: 1.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 525 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKINY-QGKEGYVSLEFVkleagkQEEKPAED 585
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSARE 66
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
369-427 |
3.05e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.99 E-value: 3.05e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 369 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKISY-QGKEGYVSLEFVkleagkQEEKPA 427
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSA 64
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
603-650 |
4.74e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.61 E-value: 4.74e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2753367523 603 VRSAANTSSSVLGNLKNGEKVTVLGKVN-GWAKINY-QGKEGYVSLEFIT 650
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERSEdGYSRVRTpKGREGWVLSRYLS 59
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
206-252 |
4.78e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.61 E-value: 4.78e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2753367523 206 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKISY-QGKEGYVSLEFV 252
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL 58
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| LytD |
COG4193 |
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]; |
697-1060 |
7.94e-40 |
|
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism];
Pssm-ID: 443347 [Multi-domain] Cd Length: 423 Bit Score: 153.59 E-value: 7.94e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 697 NGETVTIIGKENGWAKIRFNGGEGYVSLQFLKVKQGSSSYEIVTSSQKVQKPNEAEATQIMQNMKEDAYIKSDGKVVNMK 776
Cdd:COG4193 46 GGNVSTASYVGNVTGIVTTSYGNAYAAASAQKSSAGTLVGAGNVGIIKYYKKSGVVSIKAGGNSLTKASVGEKSYSITNG 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 777 QGFVRANGVINIYDITTGKKLTYVKGGADLKFVKavddriHVQIDGMTGYVNINDVTLHPTMTGEKTSYYATKNGKLYHY 856
Cdd:COG4193 126 KYTNTTDSLVYVTYAKYFGPESYYTYLLSLLYKQ------LSSVGGVAVYVDADWLNVIPTESVPGGNLKHNSYNHSLKS 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 857 VYNPENGKHATYQIGNAPKHLKEGERYEAFDKKQIGGqDSYQYFEYMPLRATSTYTGDEIDNFLRKSNAKSPLIGLGKYF 936
Cdd:COG4193 200 AAAKQYSYSWMYYDGGGWYSASGSDIAYYMDPRNFLN-DEYNYFQFLDLRYSSNYSAEELNKYLKGTFTKGILIGKGQAF 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 937 VSAAEKYKMNAGYLVSHAILESGWGTSRIA-------QDKKNLFGFRAVDSDPYNGAT------GFKTWEEGIDFCAAYI 1003
Cdd:COG4193 279 IEAAKKYGVNPLYLASHALLETGNGTSKLAkgvevngKTYYNLFGIGAYDSNPLENGAkyaykqGWTSPEKAIVGGAKFI 358
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 1004 DKHYLNPS---GNTYNGGNLGDKAQGMNVMYASDENWGQQIASLMYRIDAMngSKDLNKY 1060
Cdd:COG4193 359 GSNYINNTgygQNTLYKMRWNPVNPGTNHQYATDPFWAEKIAGHMYRAYKK--LKDYNLY 416
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
279-410 |
1.23e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.89 E-value: 1.23e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 279 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINY-QGKEGYVSLEFVKLEAGKQEEKPAEnitngtq 357
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 358 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGkEGYV 410
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
591-722 |
1.31e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.51 E-value: 1.31e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 591 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKVNGWAKINY-QGKEGYVSLEFITigkdsidptnptnpgqVTE 669
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLT----------------VTP 67
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 670 ERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRFNgGEGYV 722
Cdd:COG3103 68 SARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYR-GTGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
357-488 |
1.58e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.51 E-value: 1.58e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 357 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISY-QGKEGYVSLEFVKLEAGKQEEKPAEnitngtq 435
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 436 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 488
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
435-566 |
2.05e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.12 E-value: 2.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 435 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINY-QGKEGYVSLEFVKLEAGKQEEKPAEditngtq 513
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 514 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 566
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
513-644 |
2.05e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 102.12 E-value: 2.05e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 513 QEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINY-QGKEGYVSLEFVKLEAGKQEEKPAEditngtq 591
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDE------- 76
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 592 evgtinatsLRVRSAANTSSSVLGNLKNGEKVTVLGKVNGWAKINYQGkEGYV 644
Cdd:COG3103 77 ---------LNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
193-332 |
6.84e-25 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 100.58 E-value: 6.84e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 193 AQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISY-QGKEGYVSLEFVKIdgnteeikkpeqpktsd 271
Cdd:COG3103 3 AETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTV----------------- 65
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 272 atikngTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGkEGYV 332
Cdd:COG3103 66 ------TPSARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
109-247 |
1.62e-24 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 99.43 E-value: 1.62e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 109 QKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEY-KGKEGYVSLEFLKFGDAiqtpdtsgqkqlqp 187
Cdd:COG3103 3 AETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPS-------------- 68
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 188 iikngaqeVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGkEGYV 247
Cdd:COG3103 69 --------ARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
27-163 |
4.31e-23 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 95.58 E-value: 4.31e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 27 AESDNLATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISH-DGKEGYVTLQFLgfsngnpnveqkqqlti 105
Cdd:COG3103 1 AAAETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYL----------------- 63
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2753367523 106 nNGQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEYKGkEGYV 163
Cdd:COG3103 64 -TVTPSARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
112-513 |
9.94e-20 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 93.69 E-value: 9.94e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 112 EGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEYKGKEGYVSLEFLKfgdaiqtpdtsgqkqlqpiikn 191
Cdd:NF040676 25 ETIVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEFTK---------------------- 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 192 gaqEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKA-NGWAKISYQGKEGYVSLEFVKIDGNTEeiKKPEQPKTS 270
Cdd:NF040676 83 ---DVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLSSTAPTE--KKADEKTKQ 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 271 DATIKNGTQEvgTINATSLRVRSAANTsSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYVSLEFVKLEAGKQEEKPAE 350
Cdd:NF040676 158 VAKVQKSVKA--KEEAKTQKVAKAKET-TKAQEIVKPKEEVKVQEVVKPKEEPKVQEIVKPKEEVKVQEEVKPKEEEKVQ 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 351 NITNGTQEVgtinatslRVRSAANTsssvlgnlKNGEKVTVLGKANGWAKIS--YQGKEGYVSLEFVKleagKQEEKPAE 428
Cdd:NF040676 235 EIVKPKEEA--------KVQEEVKV--------KEEAKVQEIAKAKEEAKAQeiAKAKEEAKAQEIAK----AKEEAKAQ 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 429 NITNGTQEVGTINATSLRVRSAANTsssvLGNLKNGEKVTVLGKANGWAKIN--YQGKEGYVSLEFVKleaGKQEEKPAE 506
Cdd:NF040676 295 EIAKAKEEEKAQEIAKAKEEAKARE----IAKAKEEEKAREIAKAKEEAKAReiAKAKEEAKAREIAK---AKEEERAKE 367
|
....*..
gi 2753367523 507 DITNGTQ 513
Cdd:NF040676 368 ASKNNIQ 374
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
15-435 |
2.85e-19 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 92.54 E-value: 2.85e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 15 ATATSFiSMHAFAESDNLAT-VNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISHDGKEGYVTLQFlgfsng 93
Cdd:NF040676 8 ATATVF-GLGAFTTTATAETiVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEF------ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 94 npnveqkqqltinngQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKA-NGWAKIEYKGKEGYVSLEFLKFGD 172
Cdd:NF040676 81 ---------------TKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLSSTA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 173 AIQTPDTSGQKQLQPIIKNgaqevgtinatslrVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGKegyvslefV 252
Cdd:NF040676 146 PTEKKADEKTKQVAKVQKS--------------VKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQEVVK--------P 203
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 253 KIDGNTEEIKKPEQPKTSDATIK----NGTQEVgtinatsLRVRSAANTSSSVlgNLKNGEKVTVLGKANGWAKIN--YQ 326
Cdd:NF040676 204 KEEPKVQEIVKPKEEVKVQEEVKpkeeEKVQEI-------VKPKEEAKVQEEV--KVKEEAKVQEIAKAKEEAKAQeiAK 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 327 GKEGYVSLEFVKleagKQEEKPAENITNGTQEVGTINATSLRVRSAANTsssvLGNLKNGEKVTVLGKANGWAKIS--YQ 404
Cdd:NF040676 275 AKEEAKAQEIAK----AKEEAKAQEIAKAKEEEKAQEIAKAKEEAKARE----IAKAKEEEKAREIAKAKEEAKAReiAK 346
|
410 420 430
....*....|....*....|....*....|.
gi 2753367523 405 GKEGYVSLEFVKleaGKQEEKPAENITNGTQ 435
Cdd:NF040676 347 AKEEAKAREIAK---AKEEERAKEASKNNIQ 374
|
|
| wall_bind_EntB |
NF040676 |
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as ... |
509-772 |
4.44e-19 |
|
cell wall-binding protein EntB; This HMM describes the cell wall-binding protein EntB, as found in Bacillus cereus. EntB is related to EntA, EntC, and EndD. All Ent family proteins have a signal peptide, an N-terminal SH3 domain and a C-terminal 3D (Asp-Asp-Asp) domain. EntB and EndC have a central region with a highly variable number of repeats resembling KAXEXX. The gene symbol derives from the notion that at least some members of the family function as enterotoxins, but more recent descriptions focus on roles in stress response and cell wall integrity.
Pssm-ID: 468642 [Multi-domain] Cd Length: 476 Bit Score: 91.77 E-value: 4.44e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 509 TNGTQEVgTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYVSLEFvkleagkqeekpaeditn 588
Cdd:NF040676 20 TTATAET-IVTADVLNVREKPTTESKVVEKVKNGQELKVINTEDGWSKIELNGKEVFVSSEF------------------ 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 589 gTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKV-NGWAKINYQGKEGYVSLEFITigkdSIDPTNpTNPGQV 667
Cdd:NF040676 81 -TKDVYHVTANLLNVRTEANTESEILGRLKKDDVIESTHQVkDGWLQFEYKGKTAYANVSFLS----STAPTE-KKADEK 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 668 TEERAVVNASllnVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRfnggegyvslQFLKVKQGSSSYEIV-----TSS 742
Cdd:NF040676 155 TKQVAKVQKS---VKAKEEAKTQKVAKAKETTKAQEIVKPKEEVKVQ----------EVVKPKEEPKVQEIVkpkeeVKV 221
|
250 260 270
....*....|....*....|....*....|
gi 2753367523 743 QKVQKPNEAEATQIMQNMKEDAYIKSDGKV 772
Cdd:NF040676 222 QEEVKPKEEEKVQEIVKPKEEAKVQEEVKV 251
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
669-770 |
3.71e-16 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 75.54 E-value: 3.71e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 669 EERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRF-NGGEGYVSLQFLKVKQGSSSYEIV-------- 739
Cdd:COG3103 4 ETRYVVDADALNVRSGPGTSYRIVGTLPKGEKVTVLGRSGGWYKVRYsNGKTGWVSSRYLTVTPSARERLPDelnlragp 83
|
90 100 110
....*....|....*....|....*....|..
gi 2753367523 740 -TSSQKVQKPNEAEATQIMQNMKEDAYIKSDG 770
Cdd:COG3103 84 sTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG 115
|
|
| Glucosaminidase |
pfam01832 |
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes ... |
933-1005 |
3.39e-14 |
|
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyse peptidoglycan.
Pssm-ID: 460354 [Multi-domain] Cd Length: 91 Bit Score: 69.14 E-value: 3.39e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 933 GKYFVSAAEKYKMNAGYLVSHAILESGWGTSRIAQDKKNLFGF-------RAVDSDPYNGATGFK---TWEEGIDfcAAY 1002
Cdd:pfam01832 1 APAAIEAAKKYGIPASVLLAQAALESGWGTSRLAKESNNLFGIkaswkgkVAYDTDEVTVAARFRkydSVEESIR--DYY 78
|
...
gi 2753367523 1003 IDK 1005
Cdd:pfam01832 79 AEK 81
|
|
| LYZ2 |
smart00047 |
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes. |
925-1056 |
1.45e-12 |
|
Lysozyme subfamily 2; Eubacterial enzymes distantly related to eukaryotic lysozymes.
Pssm-ID: 214488 [Multi-domain] Cd Length: 147 Bit Score: 66.31 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 925 AKSPLIGLGKYFVSAAEKYKMNAGY---LVSHAILESGWGTSRIAQDKKNLFGF-RAVDSDPYNGAT------GFKTWEE 994
Cdd:smart00047 5 GGSTLEFVGKIFNEAQKAYQINGVYpsiLIAQAALESGWGTSKLAKKYNNLFGIkGAYDGRPVRMGTleylngGWVTVKA 84
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 995 GI--DFCAAYIDKHYLNPSGNTYNGGNLGDKAQGmNVMYASDENWGQQIASLMYRIDAMNGSKD 1056
Cdd:smart00047 85 AFrgYFGEKFIDYAYVLRGQNPLYKKRWGSNALQ-TAGYATDPDYAKKLIRIIALYDEKLKGYD 147
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
674-729 |
2.05e-12 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 63.93 E-value: 2.05e-12
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*...
gi 2753367523 674 VNASLLNVRKGPSTGAAAVGHLKNGETVTIIGK--ENGWAKIRFNGGEGYVSLQFLKV 729
Cdd:COG4991 26 VATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCtsGGGWCKVSYGGQRGWVSARYLQV 83
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
33-163 |
9.27e-12 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 64.16 E-value: 9.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 33 ATVNATNLNIREQPTTQGKVIGTV-KKGTNVQVLSKEKEWAKIS-HDGKEGYVTLQFLGfsnGNPNVeqkqqltinngqk 110
Cdd:COG3807 22 VSLKSDEVNLRDGPSTKYPILWVYkRRGLPVEVIAEFGNWRRVRdPEGDEGWVHQSLLS---GRRTV------------- 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 111 eegIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANGWAKIEYKGKEGYV 163
Cdd:COG3807 86 ---IVTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
1-97 |
2.29e-11 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 61.23 E-value: 2.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 1 MKQTTKQIITGTFLATATSfismhAFAESdnlaTVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE--WAKISHDG 78
Cdd:COG4991 1 MRRALLAAALALLLLAPAA-----AAAAT----AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGG 71
|
90
....*....|....*....
gi 2753367523 79 KEGYVTLQFLGFSNGNPNV 97
Cdd:COG4991 72 QRGWVSARYLQVSYDGQPV 90
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
599-650 |
2.98e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.57 E-value: 2.98e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 599 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKVNG-WAKI-NYQGKEGYVSLEFIT 650
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
521-572 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 521 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 572
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
443-494 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 443 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 494
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
287-338 |
3.69e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 59.18 E-value: 3.69e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 287 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-NYQGKEGYVSLEFVK 338
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
365-416 |
5.10e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 58.80 E-value: 5.10e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 365 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-SYQGKEGYVSLEFVK 416
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
202-253 |
5.10e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 58.80 E-value: 5.10e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 202 TSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG-WAKI-SYQGKEGYVSLEFVK 253
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
679-728 |
9.44e-11 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 58.03 E-value: 9.44e-11
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 679 LNVRKGPSTGAAAVGHLKNGETVTIIGKENG-WAKIR-FNGGEGYVSLQFLK 728
Cdd:pfam08239 3 LNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVRtYDGYEGWVSSSYLS 54
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
118-169 |
2.48e-10 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 56.87 E-value: 2.48e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 118 TRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANG-WAKI-EYKGKEGYVSLEFLK 169
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYLS 54
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
595-722 |
5.60e-10 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 58.76 E-value: 5.60e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 595 TINATSLRVRSAANTSSSVLGNLKN-GEKVTVLGKVNGWAKI-NYQGKEGYV--SLefitigkdsidptnptnpgqVTEE 670
Cdd:COG3807 23 SLKSDEVNLRDGPSTKYPILWVYKRrGLPVEVIAEFGNWRRVrDPEGDEGWVhqSL--------------------LSGR 82
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 671 R-AVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRFNGGEGYV 722
Cdd:COG3807 83 RtVIVTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| SH3_3 |
pfam08239 |
Bacterial SH3 domain; |
38-88 |
5.76e-10 |
|
Bacterial SH3 domain;
Pssm-ID: 462405 [Multi-domain] Cd Length: 54 Bit Score: 55.72 E-value: 5.76e-10
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 38 TNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKI-SHDGKEGYVTLQFL 88
Cdd:pfam08239 1 SGLNVRSGPSTSSEVVGTLPKGEKVEVLEEQGGgWYKVrTYDGYEGWVSSSYL 53
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
192-256 |
1.35e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 56.23 E-value: 1.35e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2753367523 192 GAQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG--WAKISYQGKEGYVSLEFVKIDG 256
Cdd:COG4991 19 AAAAATAVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVSARYLQVSY 85
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
595-655 |
1.58e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 55.84 E-value: 1.58e-09
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 595 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKVNG--WAKINYQGKEGYVSLEFITIGKDS 655
Cdd:COG4991 25 AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVSARYLQVSYDG 87
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
361-411 |
5.72e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 54.30 E-value: 5.72e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 361 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG--WAKISYQGKEGYVS 411
Cdd:COG4991 25 AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVS 77
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
517-567 |
7.59e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 53.91 E-value: 7.59e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 517 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG--WAKINYQGKEGYVS 567
Cdd:COG4991 25 AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVS 77
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
283-333 |
7.59e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 53.91 E-value: 7.59e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 283 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG--WAKINYQGKEGYVS 333
Cdd:COG4991 25 AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVS 77
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
439-489 |
7.59e-09 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 53.91 E-value: 7.59e-09
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 439 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG--WAKINYQGKEGYVS 489
Cdd:COG4991 25 AVATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVS 77
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
280-339 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 280 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 339
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
436-495 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 436 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 495
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
514-573 |
1.16e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.16e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 514 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKINYQ-GKEGYVSLEFVKL 573
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
358-417 |
1.41e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 52.34 E-value: 1.41e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 358 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKISYQ-GKEGYVSLEFVKL 417
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVNT 63
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
195-253 |
1.88e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 51.95 E-value: 1.88e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 195 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN-GWAKISYQ-GKEGYVSLEFVK 253
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVN 62
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
592-645 |
2.57e-08 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 51.56 E-value: 2.57e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2753367523 592 EVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKVN-GWAKINYQ-GKEGYVS 645
Cdd:smart00287 2 ETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVP 57
|
|
| YraI |
COG4991 |
Uncharacterized conserved protein YraI [Function unknown]; |
115-177 |
7.02e-08 |
|
Uncharacterized conserved protein YraI [Function unknown];
Pssm-ID: 444015 [Multi-domain] Cd Length: 92 Bit Score: 51.22 E-value: 7.02e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2753367523 115 VTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKANG--WAKIEYKGKEGYVSLEFLKFGDAIQTP 177
Cdd:COG4991 26 VATDDLNLRSGPGTGYPVVGTLPAGATVTVLGCTSGggWCKVSYGGQRGWVSARYLQVSYDGQPV 90
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
110-169 |
2.03e-07 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 48.87 E-value: 2.03e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 110 KEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTVLGKAN-GWAKIEYK-GKEGYVSLEFLK 169
Cdd:smart00287 1 SETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGsGQRGYVPGYVVN 62
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
181-314 |
5.89e-07 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 53.27 E-value: 5.89e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 181 GQK-QLQPIIKNGAQEvGTINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKISY-QGKEGYVSLEF------ 251
Cdd:PRK13914 66 GQKlQVNEVAAAEKTE-KSVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYltdkvt 144
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 252 ---------VKIDGNTEEIKKPEQPKTSdatIKNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVL 314
Cdd:PRK13914 145 stpvaptqeVKKETTTQQAAPAAETKTE---VKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
|
|
| YgiM |
COG3103 |
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family ... |
18-83 |
6.65e-07 |
|
Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only];
Pssm-ID: 442337 [Multi-domain] Cd Length: 119 Bit Score: 49.35 E-value: 6.65e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2753367523 18 TSFISMHAFAESDNLATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISHDGkEGYV 83
Cdd:COG3103 55 TGWVSSRYLTVTPSARERLPDELNLRAGPSTSSEVLGLLPKGETVTVLKKSGGWFKVGYRG-TGWV 119
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
361-457 |
2.34e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 51.34 E-value: 2.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 361 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKISY-QGKEGYVSLEFVKleagkqeEKPAENITNGTQEVG 438
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 439 TiNATSLRVRSAANTSSSV 457
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
669-728 |
4.63e-06 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 45.02 E-value: 4.63e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2753367523 669 EERAVVNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKEN-GWAKIRFNGGE-GYVSLQFLK 728
Cdd:smart00287 1 SETAVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGqDWAKITYGSGQrGYVPGYVVN 62
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
99-398 |
5.25e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.57 E-value: 5.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 99 QKQQLT-INNGQKEEGIVTATRLNVRNSPTLGSSMIGYVQKNEKVTV-LGKANGWAKIEY-KGKEGYVSLEFLkfGDAI- 174
Cdd:PRK13914 67 QKLQVNeVAAAEKTEKSVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYL--TDKVt 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 175 QTPDTSGQ--------KQLQPIIKNGAQEVGTINATSLRVRSAANTSSSVLG------NLKNGEKVTVLGKANGwakISY 240
Cdd:PRK13914 145 STPVAPTQevkketttQQAAPAAETKTEVKQTTQATTPAPKVAETKETPVVDqnatthAVKSGDTIWALSVKYG---VSV 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 241 QGKEGYVSLEFVKID-GNTEEIKKPEQPKTSDATIKNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANG 319
Cdd:PRK13914 222 QDIMSWNNLSSSSIYvGQKLAIKQTANTATPKAEVKTEAPAAEKQAAPVVKENTNTNTATTEKKETTTQQQTAPKAPTEA 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 320 WAKINYQGKEGYVSLEFVKLEAGKQEEK---PAENITNGTQEVGTINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKAN 396
Cdd:PRK13914 302 AKPAPAPSTNTNANKTNTNTNTNTNNTNtstPSKNTNTNTNSNTNTNSNTNANQGSSNNNSNSSASAIIAEAQKHLGKAY 381
|
..
gi 2753367523 397 GW 398
Cdd:PRK13914 382 SW 383
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
439-535 |
5.58e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.19 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 439 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKINY-QGKEGYVSLEFVKleagkqeEKPAEDITNGTQEVG 516
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 517 TiNATSLRVRSAANTSSSV 535
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
517-613 |
5.58e-06 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 50.19 E-value: 5.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 517 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKANGWAKINY-QGKEGYVSLEFVKleagkqeEKPAEDITNGTQEVG 594
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT-------DKVTSTPVAPTQEVK 155
|
90
....*....|....*....
gi 2753367523 595 TiNATSLRVRSAANTSSSV 613
Cdd:PRK13914 156 K-ETTTQQAAPAAETKTEV 173
|
|
| FlgJ |
COG1705 |
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell ... |
939-993 |
7.53e-06 |
|
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility];
Pssm-ID: 441311 [Multi-domain] Cd Length: 276 Bit Score: 48.81 E-value: 7.53e-06
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*.
gi 2753367523 939 AAEKYKMNAGYLVSHAILESGWGTSRI-AQDKKNLFGFRAvDSDPYNGATGFKTWE 993
Cdd:COG1705 143 AAKKYGVPASVLIAQAALESGWGKSELdGSPSNNLFGIKA-GGSWQGKSVEVTTTE 197
|
|
| SH3_4 |
pfam06347 |
Bacterial SH3 domain; SH3 (src Homology-3) domains are small protein modules containing ... |
676-722 |
8.15e-06 |
|
Bacterial SH3 domain; SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues. They are found in a great variety of intracellular or membrane-associated proteins, in a variety of proteins with enzymatic activity, in adaptor proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteriztic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region. Family members include probable invasion-associated protein p60 that are conceptually translated from iap genes. The iap gene, which is regarded as a virulence-associated gene in L. monocytogenes, codes for a gene product that has murein-lytic activity and is involved in cell division.
Pssm-ID: 428898 [Multi-domain] Cd Length: 56 Bit Score: 44.26 E-value: 8.15e-06
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2753367523 676 ASLLNVRKGPSTGAAAVGHLKNGETVTIIGKENGWAKIRF-NGGEGYV 722
Cdd:pfam06347 2 KDEVNLRRGPSDKAAVAAYLEAGVPVRVVACKDNWCRVRDaDGAEGWI 49
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
29-112 |
1.12e-05 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 47.31 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 29 SDNLATvnatnlNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKI-SHDGKEGYVTLQFLgfSNGNPNVEQ----KQQ 102
Cdd:TIGR04211 3 SDELFV------YMRSGPGNQYRILGSLKSGTPVTVLERSEDgYSRVrTPKGREGWVLSRYL--SDTPSARERlpelQQE 74
|
90
....*....|
gi 2753367523 103 LTINNGQKEE 112
Cdd:TIGR04211 75 LAELQEELAE 84
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
595-677 |
1.35e-05 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 49.03 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 595 TINATSLRVRSAANTSSSVLGNLKNGEKVTV-LGKVNGWAKINY-QGKEGYVSLEFITigkDSIDPTNPTNPGQVTEERA 672
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVeTTESNGWHKITYnDGKTGFVNGKYLT---DKVTSTPVAPTQEVKKETT 159
|
....*
gi 2753367523 673 VVNAS 677
Cdd:PRK13914 160 TQQAA 164
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
115-247 |
5.44e-05 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 44.51 E-value: 5.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 115 VTATRLNVRNSPTLgSSMIGYV--QKNEKVTVLGKANGWAKIE-YKGKEGYV--SLeflkfgdaiqtpdTSGQKQLQpii 189
Cdd:COG3807 24 LKSDEVNLRDGPST-KYPILWVykRRGLPVEVIAEFGNWRRVRdPEGDEGWVhqSL-------------LSGRRTVI--- 86
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 2753367523 190 kngaqevgtINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGKEGYV 247
Cdd:COG3807 87 ---------VTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
674-763 |
1.44e-04 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 45.95 E-value: 1.44e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 674 VNASLLNVRKGPSTGAAAVGHLKNGETVTIIGKE-NGWAKIRFNGGE-GYVSLQFLKVKQGSSSyeiVTSSQKVQKPNEA 751
Cdd:PRK13914 84 VSATWLNVRSGAGVDNSIITSIKGGTKVTVETTEsNGWHKITYNDGKtGFVNGKYLTDKVTSTP---VAPTQEVKKETTT 160
|
90
....*....|..
gi 2753367523 752 EATQIMQNMKED 763
Cdd:PRK13914 161 QQAAPAAETKTE 172
|
|
| SH3b |
smart00287 |
Bacterial SH3 domain homologues; |
33-84 |
2.42e-04 |
|
Bacterial SH3 domain homologues;
Pssm-ID: 214600 [Multi-domain] Cd Length: 63 Bit Score: 40.39 E-value: 2.42e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 2753367523 33 ATVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKISHD-GKEGYVT 84
Cdd:smart00287 4 AVVTGDGLNVRTGPGTSSPIIGTLKKGDKVKVLGVDGQdWAKITYGsGQRGYVP 57
|
|
| PRK13914 |
PRK13914 |
invasion associated endopeptidase; |
34-127 |
8.10e-04 |
|
invasion associated endopeptidase;
Pssm-ID: 237555 [Multi-domain] Cd Length: 481 Bit Score: 43.25 E-value: 8.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 34 TVNATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKE-WAKISH-DGKEGYVTLQFLGFSNGNPNVEQKQQLTINNGQKE 111
Cdd:PRK13914 83 SVSATWLNVRSGAGVDNSIITSIKGGTKVTVETTESNgWHKITYnDGKTGFVNGKYLTDKVTSTPVAPTQEVKKETTTQQ 162
|
90
....*....|....*.
gi 2753367523 112 EGIVTATRLNVRNSPT 127
Cdd:PRK13914 163 AAPAAETKTEVKQTTQ 178
|
|
| SH3_4 |
pfam06347 |
Bacterial SH3 domain; SH3 (src Homology-3) domains are small protein modules containing ... |
37-83 |
1.35e-03 |
|
Bacterial SH3 domain; SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues. They are found in a great variety of intracellular or membrane-associated proteins, in a variety of proteins with enzymatic activity, in adaptor proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteriztic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region. Family members include probable invasion-associated protein p60 that are conceptually translated from iap genes. The iap gene, which is regarded as a virulence-associated gene in L. monocytogenes, codes for a gene product that has murein-lytic activity and is involved in cell division.
Pssm-ID: 428898 [Multi-domain] Cd Length: 56 Bit Score: 38.10 E-value: 1.35e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*...
gi 2753367523 37 ATNLNIREQPTTQGKVIGTVKKGTNVQVLSKEKEWAKISH-DGKEGYV 83
Cdd:pfam06347 2 KDEVNLRRGPSDKAAVAAYLEAGVPVRVVACKDNWCRVRDaDGAEGWI 49
|
|
| Bax |
COG2992 |
Uncharacterized FlgJ-related protein [General function prediction only]; |
954-974 |
1.40e-03 |
|
Uncharacterized FlgJ-related protein [General function prediction only];
Pssm-ID: 442231 Cd Length: 253 Bit Score: 41.83 E-value: 1.40e-03
|
| sporang_Gsm |
NF038016 |
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA ... |
679-723 |
1.70e-03 |
|
sporangiospore maturation cell wall hydrolase GsmA; The peptidoglycan-hydrolyzing enzyme GsmA occurs in some sporangia-forming members of the Actinobacteria, such as Actinoplanes missouriensis, and is required for proper separation of spores. GsmA proteins have one or two SH3 domains N-terminal to the hydrolase domain.
Pssm-ID: 411609 [Multi-domain] Cd Length: 312 Bit Score: 42.04 E-value: 1.70e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*..
gi 2753367523 679 LNVRKGPSTGAAAVGHLKNGETVTIIGKENG------------WAKIrfnGGEGYVS 723
Cdd:NF038016 1 LNVRSGPATDSAVVGTLANGAKVTVVCKVRGeqirgtvrttsqWDRL---GSGRYVS 54
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
362-410 |
1.79e-03 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 39.89 E-value: 1.79e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2753367523 362 INATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKISYQGKEGYV 410
Cdd:COG3807 87 VTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
447-507 |
1.96e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 40.76 E-value: 1.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 447 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKINY-QGKEGYVSLEFVkleagkQEEKPAED 507
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSARE 66
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
525-585 |
1.96e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 40.76 E-value: 1.96e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2753367523 525 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKINY-QGKEGYVSLEFVkleagkQEEKPAED 585
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSARE 66
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
369-427 |
3.05e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.99 E-value: 3.05e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 369 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKISY-QGKEGYVSLEFVkleagkQEEKPA 427
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSA 64
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
291-349 |
3.16e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.99 E-value: 3.16e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2753367523 291 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKINY-QGKEGYVSLEFVkleagkQEEKPA 349
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL------SDTPSA 64
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
361-488 |
4.27e-03 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 39.12 E-value: 4.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2753367523 361 TINATSLRVRSAANTSSSVLGNLKN-GEKVTVLGKANGWAKIS-YQGKEGYVslefvkleagkqeekpAENITNGTQEVg 438
Cdd:COG3807 23 SLKSDEVNLRDGPSTKYPILWVYKRrGLPVEVIAEFGNWRRVRdPEGDEGWV----------------HQSLLSGRRTV- 85
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|
gi 2753367523 439 TINATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYV 488
Cdd:COG3807 86 IVTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
284-332 |
4.65e-03 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 38.73 E-value: 4.65e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2753367523 284 INATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYV 332
Cdd:COG3807 87 VTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| SH3 |
COG3807 |
SH3-like domain [Function unknown]; |
518-566 |
4.65e-03 |
|
SH3-like domain [Function unknown];
Pssm-ID: 443020 [Multi-domain] Cd Length: 150 Bit Score: 38.73 E-value: 4.65e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2753367523 518 INATSLRVRSAANTSSSVLGNLKNGEKVTVLGKANGWAKINYQGKEGYV 566
Cdd:COG3807 87 VTGDLANLRASPDENAAVVARLEPGVVLRLLECDGGWCKVRADGYKGWV 135
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
603-650 |
4.74e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.61 E-value: 4.74e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 2753367523 603 VRSAANTSSSVLGNLKNGEKVTVLGKVN-GWAKINY-QGKEGYVSLEFIT 650
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERSEdGYSRVRTpKGREGWVLSRYLS 59
|
|
| SH3_and_anchor |
TIGR04211 |
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved ... |
206-252 |
4.78e-03 |
|
SH3 domain protein; Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.
Pssm-ID: 275056 [Multi-domain] Cd Length: 198 Bit Score: 39.61 E-value: 4.78e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 2753367523 206 VRSAANTSSSVLGNLKNGEKVTVLGK-ANGWAKISY-QGKEGYVSLEFV 252
Cdd:TIGR04211 10 MRSGPGNQYRILGSLKSGTPVTVLERsEDGYSRVRTpKGREGWVLSRYL 58
|
|
| |
