PRC-barrel domain-containing protein [Polymorphospora rubra]
Protein Classification
PRC-barrel domain-containing protein( domain architecture ID 10525995)
PRC (photosystem reaction center)-barrel domain-containing protein; PRC-barrel domains are shared by photosynthetic reaction center subunits and proteins of RNA metabolism, similar to photosystem reaction center subunit H (PRCH), a component of the reaction center (RC), which is an integral membrane protein-pigment complex that catalyzes light-induced reduction of ubiquinone to ubiquinol, generating a transmembrane electrochemical gradient of protons used to produce ATP by ATP synthase
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
49-114 | 5.58e-04 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. : Pssm-ID: 398765 Cd Length: 78 Bit Score: 36.50 E-value: 5.58e-04
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| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
49-114 | 5.58e-04 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. Pssm-ID: 398765 Cd Length: 78 Bit Score: 36.50 E-value: 5.58e-04
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| Name | Accession | Description | Interval | E-value | ||
| PRC | pfam05239 | PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction ... |
49-114 | 5.58e-04 | ||
PRC-barrel domain; The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain. Pssm-ID: 398765 Cd Length: 78 Bit Score: 36.50 E-value: 5.58e-04
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