|
Name |
Accession |
Description |
Interval |
E-value |
| COG4191 |
COG4191 |
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal ... |
126-364 |
2.97e-71 |
|
Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms];
Pssm-ID: 443345 [Multi-domain] Cd Length: 361 Bit Score: 226.99 E-value: 2.97e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 126 LGRLTRMGNLGALGAAIAHEVNQPLSAIVTSGNACQRWLNRQPPQlERAHQALQRMLDQAERASNVINRVRGMARGEAPN 205
Cdd:COG4191 133 LVQSEKLAALGELAAGIAHEINNPLAAILGNAELLRRRLEDEPDP-EELREALERILEGAERAAEIVRSLRAFSRRDEEE 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 206 LEAVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEAVHHwtvpsdpiAVQVS 285
Cdd:COG4191 212 REPVDLNELIDEALELLRPRLKARGIEVELDLPPDLPPVLGDPGQLEQVLLNLLINAIDAMEEGEGG--------RITIS 283
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 286 AAVlPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP--QGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPL 363
Cdd:COG4191 284 TRR-EGDYVVISVRDNGPGIPPEVLERIFEPFFTTKPvgKGTGLGLSISYGIVEKHGGRIEVESEPGG--GTTFTITLPL 360
|
.
gi 2772025463 364 A 364
Cdd:COG4191 361 A 361
|
|
| NtrY |
COG5000 |
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism ... |
131-364 |
1.04e-52 |
|
Signal transduction histidine kinase NtrY involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms];
Pssm-ID: 444024 [Multi-domain] Cd Length: 422 Bit Score: 180.16 E-value: 1.04e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 131 RMGNLGALGAAIAHEVNQPLSAIvtSGNAcQRWLNRQPPQLERAHQALQRMLD----QAERASNVINRVRGMARGEAPNL 206
Cdd:COG5000 197 RLAAWGELARRIAHEIKNPLTPI--QLSA-ERLRRKLADKLEEDREDLERALDtiirQVDRLKRIVDEFLDFARLPEPQL 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 207 EAVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpiaVQVSA 286
Cdd:COG5000 274 EPVDLNELLREVLALYEPALKEKDIRLELDLDPDLPEVLADRDQLEQVLINLLKNAIEAIEEGGE----------IEVST 343
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2772025463 287 AVLPGqQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG5000 344 RREDG-RVRIEVSDNGPGIPEEVLERIFEPFFTTKPKGTGLGLAIVKKIVEEHGGTIELESRPGG--GTTFTIRLPLA 418
|
|
| NtrB |
COG3852 |
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms]; |
126-364 |
1.25e-51 |
|
Signal transduction histidine kinase NtrB, nitrogen specific [Signal transduction mechanisms];
Pssm-ID: 443061 [Multi-domain] Cd Length: 361 Bit Score: 175.81 E-value: 1.25e-51
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 126 LGRLTRMGNLGALGAAIAHEVNQPLSAIvtSGNAcQRWLNRQPPqlERAHQALQRMLDQAERASNVINRVRGMARGEAPN 205
Cdd:COG3852 126 LRRAEKLAAVGELAAGLAHEIRNPLTGI--RGAA-QLLERELPD--DELREYTQLIIEEADRLNNLVDRLLSFSRPRPPE 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 206 LEAVDLDAVVQEMLPLIQARLAeRHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEA----VHHWTVPSDPIA 281
Cdd:COG3852 201 REPVNLHEVLERVLELLRAEAP-KNIRIVRDYDPSLPEVLGDPDQLIQVLLNLVRNAAEAMPEGgtitIRTRVERQVTLG 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 282 VQVsaavlPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFIT 360
Cdd:COG3852 280 GLR-----PRLYVRIEVIDNGPGIPEEILDRIFEPFFTTKEKGTGLGLAIVQKIVEQHGGTIEVESEpGKGTT---FRIY 351
|
....
gi 2772025463 361 LPLA 364
Cdd:COG3852 352 LPLE 355
|
|
| KdpD |
COG2205 |
K+-sensing histidine kinase KdpD [Signal transduction mechanisms]; |
140-364 |
5.69e-50 |
|
K+-sensing histidine kinase KdpD [Signal transduction mechanisms];
Pssm-ID: 441807 [Multi-domain] Cd Length: 239 Bit Score: 167.78 E-value: 5.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 140 AAIAHEVNQPLSAIVTsgnACQRWLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEA----PNLEAVDLDAVV 215
Cdd:COG2205 21 ANVSHELRTPLTSILG---AAELLLDEEDLSPEERRELLEIIRESAERLLRLIEDLLDLSRLESgklsLELEPVDLAELL 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 216 QEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAveeavhhwTVPSDPIAVQVSAAvlpGQQVQ 295
Cdd:COG2205 98 EEAVEELRPLAEEKGIRLELDLPPELPLVYADPELLEQVLANLLDNAIKY--------SPPGGTITISARRE---GDGVR 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2772025463 296 LTVQDCGVGLPAAIAEHVFDAFW----STKPQGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG2205 167 ISVSDNGPGIPEEELERIFERFYrgdnSRGEGGTGLGLAIVKRIVEAHGGTIWVESEPGG--GTTFTVTLPLA 237
|
|
| BaeS |
COG0642 |
Signal transduction histidine kinase [Signal transduction mechanisms]; |
24-364 |
1.69e-47 |
|
Signal transduction histidine kinase [Signal transduction mechanisms];
Pssm-ID: 440407 [Multi-domain] Cd Length: 328 Bit Score: 163.93 E-value: 1.69e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 24 LIAWWDTYMEQAVAAAVLYIMVILVALRWLSARSVVTVTLVAVVLTVLSYAWSAGVASEAGWQVTEAGWINACISVLAIV 103
Cdd:COG0642 1 LLLLLLLLVLLLLLLLLLLLALLLLLLLLLLLALLLLLALLLLLLLLLLLLLLLALALLALLLLLLLLLLLLLLLLLLLL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 104 ITAYLGLRMQQARAAEHAARERLGRLTRMgnLGALGAAIAHEVNQPLSAIVtsgNACQRWLNRQPPQLERAhqaLQRMLD 183
Cdd:COG0642 81 LLLLLLLLLLLLLLLLLALLLLLEEANEA--KSRFLANVSHELRTPLTAIR---GYLELLLEELDEEQREY---LETILR 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 184 QAERASNVINRVRGMARGEA----PNLEAVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLL 259
Cdd:COG0642 153 SADRLLRLINDLLDLSRLEAgkleLEPEPVDLAELLEEVVELFRPLAEEKGIELELDLPDDLPTVRGDPDRLRQVLLNLL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 260 LNAADAveeavhhwTVPSDPIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP----QGMGLGLSLCRSM 335
Cdd:COG0642 233 SNAIKY--------TPEGGTVTVSVRRE---GDRVRISVEDTGPGIPPEDLERIFEPFFRTDPsrrgGGTGLGLAIVKRI 301
|
330 340
....*....|....*....|....*....
gi 2772025463 336 VESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG0642 302 VELHGGTIEVESEPGK--GTTFTVTLPLA 328
|
|
| WalK |
COG5002 |
Sensor histidine kinase WalK [Signal transduction mechanisms]; |
140-364 |
1.98e-40 |
|
Sensor histidine kinase WalK [Signal transduction mechanisms];
Pssm-ID: 444026 [Multi-domain] Cd Length: 390 Bit Score: 147.01 E-value: 1.98e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 140 AAIAHEVNQPLSAIVTSGNACQRWLNRQPPQLERAhqaLQRMLDQAERASNVINRVRGMARGEA----PNLEAVDLDAVV 215
Cdd:COG5002 170 ANVSHELRTPLTSIRGYLELLLDGAADDPEERREY---LEIILEEAERLSRLVNDLLDLSRLESgelkLEKEPVDLAELL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 216 QEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNaadaveeAVHHwTVPSDPIAVQVSAAvlpGQQVQ 295
Cdd:COG5002 247 EEVVEELRPLAEEKGIELELDLPEDPLLVLGDPDRLEQVLTNLLDN-------AIKY-TPEGGTITVSLREE---DDQVR 315
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2772025463 296 LTVQDCGVGLPAAIAEHVFDAFW------STKPQGMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFITLPLA 364
Cdd:COG5002 316 ISVRDTGIGIPEEDLPRIFERFYrvdksrSRETGGTGLGLAIVKHIVEAHGGRIWVESEpGKGTT---FTITLPLA 388
|
|
| COG4251 |
COG4251 |
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal ... |
141-364 |
6.42e-34 |
|
Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms];
Pssm-ID: 443393 [Multi-domain] Cd Length: 503 Bit Score: 131.45 E-value: 6.42e-34
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 141 AIAHEVNQPLSAIVtsgNACQRWLNRQPPQL-ERAHQALQRMLDQAERASNVINRVRGMAR--GEAPNLEAVDLDAVVQE 217
Cdd:COG4251 288 VASHDLREPLRKIS---GFSQLLEEDYGDKLdEEGREYLERIRDAAERMQALIDDLLAYSRvgRQELEFEPVDLNELLEE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 218 MLPLIQARLAERHLQVRWTPpvaLPHVWADKLQLQQVLGNLLLNAadaveeaVHHwTVPSDPIAVQVSAAVLPGQqVQLT 297
Cdd:COG4251 365 VLEDLEPRIEERGAEIEVGP---LPTVRGDPTLLRQVFQNLISNA-------IKY-SRPGEPPRIEIGAEREGGE-WVFS 432
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772025463 298 VQDCGVGLPAAIAEHVFDAFW----STKPQGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG4251 433 VRDNGIGIDPEYAEKIFEIFQrlhsRDEYEGTGIGLAIVKKIVERHGGRIWVESEPGE--GATFYFTLPKA 501
|
|
| HATPase_TmoS-FixL-DctS-like |
cd16920 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-362 |
1.36e-31 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhizobium meliloti FixL, and Rhodobacter capsulatus DctS; includes hybrid sensor histidine kinase similar to Pseudomonas mendocina TmoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs), such as Pseudomonas mendocina TmoS HK of the TmoS-TmoT TCS, which controls the expression of the toluene-4-monooxygenase pathway, Rhizobium meliloti FixL HK of the FixL-FixJ TCS, which regulates the expression of the genes related to nitrogen fixation in the root nodule in response to O(2) levels, and Rhodobacter capsulatus DctS of the DctS-DctR TCS, which controls synthesis of the high-affinity C4-dicarboxylate transport system. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and PAS sensor domain(s); many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340397 [Multi-domain] Cd Length: 104 Bit Score: 115.19 E-value: 1.36e-31
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAAdaveEAVHHWTVPSDPIAVQVSAAVLpgQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLS 330
Cdd:cd16920 1 IQQVLINLVRNGI----EAMSEGGCERRELTIRTSPADD--RAVTISVKDTGPGIAEEVAGQLFDPFYTTKSEGLGMGLS 74
|
90 100 110
....*....|....*....|....*....|..
gi 2772025463 331 LCRSMVESMGGRIWAQPRNDGttGAMFFITLP 362
Cdd:cd16920 75 ICRSIIEAHGGRLSVESPAGG--GATFQFTLP 104
|
|
| PRK10364 |
PRK10364 |
two-component system sensor histidine kinase ZraS; |
128-364 |
4.18e-30 |
|
two-component system sensor histidine kinase ZraS;
Pssm-ID: 236674 [Multi-domain] Cd Length: 457 Bit Score: 119.89 E-value: 4.18e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 128 RLTRMGNLGALGAAIAHEVNQPLSAIvtSGNAcqRWLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEAPNLE 207
Cdd:PRK10364 230 RKEKLVALGHLAAGVAHEIRNPLSSI--KGLA--KYFAERAPAGGEAHQLAQVMAKEADRLNRVVSELLELVKPTHLALQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 208 AVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEavhhwtvpSDPIAVQVSAA 287
Cdd:PRK10364 306 AVDLNDLINHSLQLVSQDANSREIQLRFTANDTLPEIQADPDRLTQVLLNLYLNAIQAIGQ--------HGVISVTASES 377
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2772025463 288 vlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPRNdgTTGAMFFITLPLA 364
Cdd:PRK10364 378 ---GAGVKISVTDSGKGIAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQE--GKGATFTLWLPVN 449
|
|
| PRK11360 |
PRK11360 |
two-component system sensor histidine kinase AtoS; |
128-363 |
1.50e-29 |
|
two-component system sensor histidine kinase AtoS;
Pssm-ID: 236901 [Multi-domain] Cd Length: 607 Bit Score: 119.69 E-value: 1.50e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 128 RLTRMGNLGALGAAIAHEVNQPLSAIvtSGNAcQRWlNRQPPQleRAHQ-ALQRMLDQAERASNVINRVRGMARGEAPNL 206
Cdd:PRK11360 383 RQERLAALGELVAGVAHEIRNPLTAI--RGYV-QIW-RQQTSD--PPSQeYLSVVLREVDRLNKVIDQLLEFSRPRESQW 456
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 207 EAVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEAvhhwtvpsdpIAVQVSA 286
Cdd:PRK11360 457 QPVSLNALVEEVLQLFQTAGVQARVDFETELDNELPPIWADPELLKQVLLNILINAVQAISAR----------GKIRIRT 526
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2772025463 287 AVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPL 363
Cdd:PRK11360 527 WQYSDGQVAVSIEDNGCGIDPELLKKIFDPFFTTKAKGTGLGLALSQRIINAHGGDIEVESEPGV--GTTFTLYLPI 601
|
|
| KinE |
COG5809 |
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome ... |
135-367 |
1.85e-28 |
|
Sporulation sensor histidine kinase E [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444511 [Multi-domain] Cd Length: 489 Bit Score: 115.84 E-value: 1.85e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 135 LGALGAAIAHEVNQPLSAI-----VTSGNACqrwlnrqppqlERAHQALQRMLDQAERASNVINRVRGMARGEAPNLEAV 209
Cdd:COG5809 270 VGELAAGIAHEIRNPLTSLkgfiqLLKDTID-----------EEQKTYLDIMLSELDRIESIISEFLVLAKPQAIKYEPK 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 210 DLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpiaVQVSAAVL 289
Cdd:COG5809 339 DLNTLIEEVIPLLQPQALLKNVQIELELEDDIPDILGDENQLKQVFINLLKNAIEAMPEGGN----------ITIETKAE 408
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2772025463 290 PGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFITLPLAYTE 367
Cdd:COG5809 409 DDDKVVISVTDEGCGIPEERLKKLGEPFYTTKEKGTGLGLMVSYKIIEEHGGKITVESEvGKGTT---FSITLPIKLSE 484
|
|
| HATPase_c |
smart00387 |
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases. |
246-364 |
9.72e-26 |
|
Histidine kinase-like ATPases; Histidine kinase-, DNA gyrase B-, phytochrome-like ATPases.
Pssm-ID: 214643 [Multi-domain] Cd Length: 111 Bit Score: 99.65 E-value: 9.72e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 246 ADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP--- 322
Cdd:smart00387 1 GDPDRLRQVLSNLLDNAIKYTPEGGR--------ITVTLERD---GDHVEITVEDNGPGIPPEDLEKIFEPFFRTDKrsr 69
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2772025463 323 --QGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:smart00387 70 kiGGTGLGLSIVKKLVELHGGEISVESEPGG--GTTFTITLPLE 111
|
|
| PRK13837 |
PRK13837 |
two-component system VirA-like sensor kinase; |
131-374 |
1.29e-25 |
|
two-component system VirA-like sensor kinase;
Pssm-ID: 237526 [Multi-domain] Cd Length: 828 Bit Score: 108.61 E-value: 1.29e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 131 RMGNLGALGAAIAHEVNQPLSAIVtsGNAcQRWLNRQPPQlERAHQALQRMLDQAERASNVINRVRGMARGEAPNLEAVD 210
Cdd:PRK13837 446 RLEAVGTLASGIAHNFNNILGAIL--GYA-EMALNKLARH-SRAARYIDEIISAGARARLIIDQILAFGRKGERNTKPFD 521
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 211 LDAVVQEMLPLIQARLAER-HLQVRWTPPVAlpHVWADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpIAVQVSAAVL 289
Cdd:PRK13837 522 LSELVTEIAPLLRVSLPPGvELDFDQDQEPA--VVEGNPAELQQVLMNLCSNAAQAMDGAGR--------VDISLSRAKL 591
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 290 ------------PGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIWAQPRNDgtTGAMF 357
Cdd:PRK13837 592 rapkvlshgvlpPGRYVLLRVSDTGAGIDEAVLPHIFEPFFTTRAGGTGLGLATVHGIVSAHAGYIDVQSTVG--RGTRF 669
|
250
....*....|....*..
gi 2772025463 358 FITLPLAYTEHAIAQSF 374
Cdd:PRK13837 670 DVYLPPSSKVPVAPQAF 686
|
|
| KinA |
COG5805 |
Sporulation sensor histidine kinase A (Stage II sporulation protein SpoIIF/SpoIIJ) [Cell cycle ... |
128-363 |
3.64e-25 |
|
Sporulation sensor histidine kinase A (Stage II sporulation protein SpoIIF/SpoIIJ) [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444507 [Multi-domain] Cd Length: 496 Bit Score: 106.35 E-value: 3.64e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 128 RLTRMGNLGALGAAIAHEVNQPLSAIvtsgnacQRWLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEAPNLE 207
Cdd:COG5805 280 RSEKLSIAGQLAAGIAHEIRNPLTSI-------KGFLQLLQPGIEDKEEYFDIMLSELDRIESIISEFLALAKPQAVNKE 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 208 AVDLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEeavhhwtvpsDPIAVQVSAa 287
Cdd:COG5805 353 KENINELIQDVVTLLETEAILHNIQIRLELLDEDPFIYCDENQIKQVFINLIKNAIEAMP----------NGGTITIHT- 421
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2772025463 288 VLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRIwaQPRNDGTTGAMFFITLPL 363
Cdd:COG5805 422 EEEDNSVIIRVIDEGIGIPEERLKKLGEPFFTTKEKGTGLGLMVSYKIIENHNGTI--DIDSKVGKGTTFTITLPL 495
|
|
| HATPase_c |
pfam02518 |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the ... |
246-364 |
4.44e-23 |
|
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; This family represents the structurally related ATPase domains of histidine kinase, DNA gyrase B and HSP90.
Pssm-ID: 460579 [Multi-domain] Cd Length: 109 Bit Score: 92.43 E-value: 4.44e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 246 ADKLQLQQVLGNLLLNAADAveeavhhwTVPSDPIAVQVSaavlPGQQVQLTVQDCGVGLPAAIAEHVFDAFWS---TKP 322
Cdd:pfam02518 1 GDELRLRQVLSNLLDNALKH--------AAKAGEITVTLS----EGGELTLTVEDNGIGIPPEDLPRIFEPFSTadkRGG 68
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2772025463 323 QGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:pfam02518 69 GGTGLGLSIVRKLVELLGGTITVESEPGG--GTTVTLTLPLA 108
|
|
| KinB |
COG5806 |
Sporulation sensor histidine kinase B [Cell cycle control, cell division, chromosome ... |
97-364 |
8.11e-23 |
|
Sporulation sensor histidine kinase B [Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms];
Pssm-ID: 444508 [Multi-domain] Cd Length: 412 Bit Score: 98.79 E-value: 8.11e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 97 ISVLAIVITAYLGLRMQQARAAEHAarerLGRLTRMGNLGALGAAIAHEVNQPLSAIvtsgnacqR----WLNRQPPQLE 172
Cdd:COG5806 167 IQLLAMLIAVYLIENLIENILLRKE----LQRAEKLEVVSELAASIAHEVRNPLTVV--------RgfiqLLQEPELSDE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 173 RAHQALQRMLDQAERASNVINRVRGMARGEAPNLEAVDLDAVVQEMLPLIQ--ARLAERHLQVRWTPPValpHVWADKLQ 250
Cdd:COG5806 235 KRKQYIRIALEELDRAEAIITDYLTFAKPQPEKLEKIDVSEELEHVIDVLSpyANMNNVEIQTELEPGL---YIEGDRQK 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEEA--VHhwtvpsdpIAVQVSaavlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLG 328
Cdd:COG5806 312 LQQCLINIIKNGIEAMPNGgtLT--------IDVSID-----KNKVIISIKDTGVGMTKEQLERLGEPYFSTKEKGTGLG 378
|
250 260 270
....*....|....*....|....*....|....*...
gi 2772025463 329 LSLCRSMVESMGGRI--WAQPrNDGTTgamFFITLPLA 364
Cdd:COG5806 379 TMVSYRIIEAMNGTIrvESEV-GKGTT---FTITLPLA 412
|
|
| COG4192 |
COG4192 |
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal ... |
132-343 |
1.39e-22 |
|
Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms];
Pssm-ID: 443346 [Multi-domain] Cd Length: 640 Bit Score: 99.38 E-value: 1.39e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 132 MGNLGALGAAIAHEVNQPLSAIVTSGNACQRWLnrQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEAPNLEAVDL 211
Cdd:COG4192 430 MAVVGQTMTSLAHELNQPLNAMSMYLFSAKKAL--EQENYAQLPTSLDKIEGLIERMDKIIKSLRQFSRKSDTPLQPVDL 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 212 DAVVQEMLPLIQARlaERHLQVRWTPPVALPhVWADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpIAVQVsaaVLPG 291
Cdd:COG4192 508 RQVIEQAWELVESR--AKPQQITLHIPDDLM-VQGDQVLLEQVLVNLLVNALDAVATQPQ--------ISVDL---LSNA 573
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 2772025463 292 QQVQLTVQDCGVGLPaaIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRI 343
Cdd:COG4192 574 ENLRVAISDNGNGWP--LVDKLFTPFTTTKEVGLGLGLSICRSIMQQFGGDL 623
|
|
| CitA |
COG3290 |
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction ... |
170-364 |
1.43e-21 |
|
Sensor histidine kinase DipB regulating citrate/malate metabolism [Signal transduction mechanisms];
Pssm-ID: 442519 [Multi-domain] Cd Length: 389 Bit Score: 94.92 E-value: 1.43e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 170 QLERAHQALQRMLDQAERASNVINRVRGmargeapNLEAVDLDAVVQEMLpliqARLAERHLQVRWTPPVALPHVWADKL 249
Cdd:COG3290 212 QLGEYDEALEYIDEISEELQELIDSLLS-------RIGNPVLAALLLGKA----ARARERGIDLTIDIDSDLPDLPLSDT 280
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 250 QLQQVLGNLLLNAADAVEEAvhhwtvPSDPIAVQVSAAVLpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP-QGMGLG 328
Cdd:COG3290 281 DLVTILGNLLDNAIEAVEKL------PEEERRVELSIRDD-GDELVIEVEDSGPGIPEELLEKIFERGFSTKLgEGRGLG 353
|
170 180 190
....*....|....*....|....*....|....*.
gi 2772025463 329 LSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG3290 354 LALVKQIVEKYGGTIEVESEEGE--GTVFTVRLPKE 387
|
|
| PRK09303 |
PRK09303 |
histidine kinase; |
140-362 |
1.78e-21 |
|
histidine kinase;
Pssm-ID: 236462 [Multi-domain] Cd Length: 380 Bit Score: 94.63 E-value: 1.78e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 140 AAIAHEVNQPLSAIVTSGNACQrwLNRQPPQLERAHQALQRMLDQAERASNVINRV------RGMARGEAPNLEA--VDL 211
Cdd:PRK09303 156 AMLAHDLRTPLTAASLALETLE--LGQIDEDTELKPALIEQLQDQARRQLEEIERLitdlleVGRTRWEALRFNPqkLDL 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 212 DAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsdpiaVQVSAAVLPG 291
Cdd:PRK09303 234 GSLCQEVILELEKRWLAKSLEIQTDIPSDLPSVYADQERIRQVLLNLLDNAIKYTPEGGT----------ITLSMLHRTT 303
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2772025463 292 QQVQLTVQDCGVGLPAAIAEHVF-DAF---WSTKPQGMGLGLSLCRSMVESMGGRIW--AQPRNdgttGAMFFITLP 362
Cdd:PRK09303 304 QKVQVSICDTGPGIPEEEQERIFeDRVrlpRDEGTEGYGIGLSVCRRIVRVHYGQIWvdSEPGQ----GSCFHFTLP 376
|
|
| PRK10490 |
PRK10490 |
sensor protein KdpD; Provisional |
137-363 |
2.06e-20 |
|
sensor protein KdpD; Provisional
Pssm-ID: 236701 [Multi-domain] Cd Length: 895 Bit Score: 93.18 E-value: 2.06e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 137 ALGAAIAHEVNQPLSaiVTSGNACQRWLN---RQPPQLERAHQALQRMLDqaerASNVINRVRGMAR----GEAPNLEAV 209
Cdd:PRK10490 666 ALLAALSHDLRTPLT--VLFGQAEILTLDlasEGSPHARQASEIRQQVLN----TTRLVNNLLDMARiqsgGFNLRKEWL 739
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 210 DLDAVVQEMLPLIQARLAERHLQVRWTPPVALPHVwaDKLQLQQVLGNLLLNAadaveeavHHWTVPSDPIAVQVSAAvl 289
Cdd:PRK10490 740 TLEEVVGSALQMLEPGLSGHPINLSLPEPLTLIHV--DGPLFERVLINLLENA--------VKYAGAQAEIGIDAHVE-- 807
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2772025463 290 pGQQVQLTVQDCGVGLPAAIAEHVFDAFW-----STKPqGMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLPL 363
Cdd:PRK10490 808 -GERLQLDVWDNGPGIPPGQEQLIFDKFArgnkeSAIP-GVGLGLAICRAIVEVHGGTIWAENRPEG--GACFRVTLPL 882
|
|
| PRK11100 |
PRK11100 |
sensory histidine kinase CreC; Provisional |
141-364 |
9.63e-20 |
|
sensory histidine kinase CreC; Provisional
Pssm-ID: 236846 [Multi-domain] Cd Length: 475 Bit Score: 90.29 E-value: 9.63e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 141 AIAHEVNQPLSAIVTSGNAcqrwLNRQPPQLERAHQALQrMLDQAERASNVINRVRGMARGEAPN----LEAVDLDAVVQ 216
Cdd:PRK11100 262 TLTHELKSPLAAIRGAAEL----LQEDPPPEDRARFTGN-ILTQSARLQQLIDRLLELARLEQRQelevLEPVALAALLE 336
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 217 EMLPLIQARLAERHLQVRWTPPVAlpHVWADKLQLQQVLGNLLLNAADaveeavhhWTVPSDPIAVQVSAAvlpGQQVQL 296
Cdd:PRK11100 337 ELVEAREAQAAAKGITLRLRPDDA--RVLGDPFLLRQALGNLLDNAID--------FSPEGGTITLSAEVD---GEQVAL 403
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2772025463 297 TVQDCGVGLPAAIAEHVFDAFWS-----TKPQGMGLGLSLCRSMVESMGGRIwaQPRNDGTTGAMFFITLPLA 364
Cdd:PRK11100 404 SVEDQGPGIPDYALPRIFERFYSlprpaNGRKSTGLGLAFVREVARLHGGEV--TLRNRPEGGVLATLTLPRH 474
|
|
| PRK13557 |
PRK13557 |
histidine kinase; Provisional |
126-358 |
2.81e-18 |
|
histidine kinase; Provisional
Pssm-ID: 237425 [Multi-domain] Cd Length: 540 Bit Score: 86.26 E-value: 2.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 126 LGRLTRMGNLGALGAAIAHEVNQPLSAIVTSGNACQRWLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEAPN 205
Cdd:PRK13557 154 LRQAQKMEALGQLTGGIAHDFNNLLQVMSGYLDVIQAALSHPDADRGRMARSVENIRAAAERAATLTQQLLAFARKQRLE 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 206 LEAVDLDAVVQEMLPLIQARLAErHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAADAVEEA----VHHWTVPSDPIA 281
Cdd:PRK13557 234 GRVLNLNGLVSGMGELAERTLGD-AVTIETDLAPDLWNCRIDPTQAEVALLNVLINARDAMPEGgrvtIRTRNVEIEDED 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 282 VQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP--QGMGLGLSLCRSMVESMGG--RIWAQPrNDGTTGAMF 357
Cdd:PRK13557 313 LAMYHGLPPGRYVSIAVTDTGSGMPPEILARVMDPFFTTKEegKGTGLGLSMVYGFAKQSGGavRIYSEV-GEGTTVRLY 391
|
.
gi 2772025463 358 F 358
Cdd:PRK13557 392 F 392
|
|
| HATPase_AtoS-like |
cd16943 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
250-363 |
5.49e-18 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Escherichia coli AtoS, an HK of the AtoS-AtoC TCS. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have accessory domains such as HAMP or PAS sensor domains or CBS-pair domains.
Pssm-ID: 340419 [Multi-domain] Cd Length: 105 Bit Score: 78.62 E-value: 5.49e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 250 QLQQVLGNLLLNAADAVEEavhhwtvpSDPIAVQVSAAVlpgQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP--QGMGL 327
Cdd:cd16943 3 QLNQVLLNLLVNAAQAMEG--------RGRITIRTWAHV---DQVLIEVEDTGSGIDPEILGRIFDPFFTTKPvgEGTGL 71
|
90 100 110
....*....|....*....|....*....|....*.
gi 2772025463 328 GLSLCRSMVESMGGRIwaQPRNDGTTGAMFFITLPL 363
Cdd:cd16943 72 GLSLSYRIIQKHGGTI--RVASVPGGGTRFTIILPI 105
|
|
| HATPase_EvgS-ArcB-TorS-like |
cd16922 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid ... |
251-363 |
5.03e-17 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases, many are hybrid sensor histidine kinases, similar to Escherichia coli EvgS, ArcB, TorS, BarA, RcsC; This family contains the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinases (HKs), including the following Escherichia coli HKs: EvgS, a HK of the EvgS-EvgA two-component system (TCS) that confers acid resistance; ArcB, a HK of the ArcB-ArcA TCS that modulates the expression of numerous genes in response to respiratory growth conditions; TorS, a HK of the TorS-TorR TCS which is involved in the anaerobic utilization of trimethylamine-N-oxide; BarA, a HK of the BarA-UvrY TCS involved in the regulation of carbon metabolism; and RcsC, a HK of the RcsB-RcsC TCS which regulates the expression of the capsule operon and of the cell division gene ftsZ. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), with most having accessory sensor domain(s) such as GAF, PAS and CHASE; many are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340399 [Multi-domain] Cd Length: 110 Bit Score: 75.99 E-value: 5.03e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEE-AVHhwtvpsdpIAVQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAF------WSTKPQ 323
Cdd:cd16922 1 LRQILLNLLGNAIKFTEEgEVT--------LRVSLEEEEEDGVQLRFSVEDTGIGIPEEQQARLFEPFsqadssTTRKYG 72
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2772025463 324 GMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFITLPL 363
Cdd:cd16922 73 GTGLGLAISKKLVELMGGDISVESEpGQGST---FTFTLPL 110
|
|
| HATPase_HupT_MifS-like |
cd16976 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-361 |
8.67e-17 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Rhodobacter capsulatus HupT and Pseudomonas aeruginosa MifS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Rhodobacter capsulatus HupT of the HupT-HupR two-component regulatory system (TCS), which regulates the synthesis of HupSL, a membrane bound [NiFe]hydrogenase. It also contains the HATPase domain of Pseudomonas aeruginosa MifS, the HK of the MifS-MifR TCS, which may be involved in sensing alpha-ketoglutarate and regulating its transport and subsequent metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some also have a C-terminal PAS sensor domain.
Pssm-ID: 340435 [Multi-domain] Cd Length: 102 Bit Score: 75.19 E-value: 8.67e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEEAVHHWtvpsdpiaVQVSAAVLPGQQVqLTVQDCGVGLPAAIAEHVFDAFWSTKP--QGMGLG 328
Cdd:cd16976 1 IQQVLMNLLQNALDAMGKVENPR--------IRIAARRLGGRLV-LVVRDNGPGIAEEHLSRVFDPFFTTKPvgKGTGLG 71
|
90 100 110
....*....|....*....|....*....|...
gi 2772025463 329 LSLCRSMVESMGGRIwaQPRNDGTTGAMFFITL 361
Cdd:cd16976 72 LSISYGIVEEHGGRL--SVANEEGAGARFTFDL 102
|
|
| HATPase_NtrY-like |
cd16944 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
247-362 |
2.53e-16 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Azorhizobium caulinodans NtrY; This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Azorhizobium caulinodans ORS571 NtrY of the NtrY-NtrX TCS, which is involved in nitrogen fixation and metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also have PAS sensor domains.
Pssm-ID: 340420 [Multi-domain] Cd Length: 108 Bit Score: 74.11 E-value: 2.53e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNAADAVEEAvhhwtvPSDPIAVQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMG 326
Cdd:cd16944 1 DTTQISQVLTNILKNAAEAIEGR------PSDVGEVRIRVEADQDGRIVLIVCDNGKGFPREMRHRATEPYVTTRPKGTG 74
|
90 100 110
....*....|....*....|....*....|....*.
gi 2772025463 327 LGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLP 362
Cdd:cd16944 75 LGLAIVKKIMEEHGGRISLSNREAG--GACIRIILP 108
|
|
| HATPase_CckA-like |
cd16919 |
Histidine kinase-like ATPase domain of two-component sensor hybrid histidine kinases, similar ... |
251-358 |
4.32e-15 |
|
Histidine kinase-like ATPase domain of two-component sensor hybrid histidine kinases, similar to Brucella abortus 2308 CckA; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) similar to Brucella abortus 2308 CckA, which is a component of an essential protein phosphorelay that regulates expression of genes required for growth, division, and intracellular survival; phosphoryl transfer initiates from the sensor kinase CckA and proceeds via the ChpT phosphotransferase to two regulatory substrates: the DNA-binding response regulator CtrA and the phospho-receiver protein CpdR. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), a REC signal receiver domain, and some contain PAS or PAS and GAF sensor domain(s).
Pssm-ID: 340396 [Multi-domain] Cd Length: 116 Bit Score: 70.87 E-value: 4.32e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEEA----VHHWTVPSDPIAVQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP--QG 324
Cdd:cd16919 1 LELAILNLAVNARDAMPEGgrltIETSNQRVDADYALNYRDLIPGNYVCLEVSDTGSGMPAEVLRRAFEPFFTTKEvgKG 80
|
90 100 110
....*....|....*....|....*....|....*.
gi 2772025463 325 MGLGLSLCRSMVESMGG--RIWAQPrNDGTTGAMFF 358
Cdd:cd16919 81 TGLGLSMVYGFVKQSGGhlRIYSEP-GVGTTVRIYL 115
|
|
| HATPase_FilI-like |
cd16921 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-362 |
2.35e-14 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Methanosaeta harundinacea FilI and some hybrid sensor histidine kinases; This family includes FilI, the histidine kinase (HK) component of FilI-FilRs, a two-component signal transduction system (TCS) of the methanogenic archaeon, Methanosaeta harundinacea, which is involved in regulating methanogenesis. The cytoplasmic HK core consists of a C-terminal HK-like ATPase domain (represented here) and a histidine kinase dimerization and phosphoacceptor domain (HisKA) domain, which, in FilI, are coupled to CHASE, HAMP, PAS, and GAF sensor domains. FilI-FilRs catalyzes the phosphotransfer between FilI (HK) and FilRs (FilR1 and FilR2, response regulators) of the TCS. TCSs are predicted to be of bacterial origin, and acquired by archaea by horizontal gene transfer. This model also includes related HATPase domains such as that of Synechocystis sp. PCC6803 phytochrome-like protein Cph1. Proteins having this HATPase domain and HisKA domain also have accessory sensor domains such as CHASE, GAF, HAMP and PAS; some are hybrid sensor histidine kinases as they also contain a REC signal receiver domain.
Pssm-ID: 340398 [Multi-domain] Cd Length: 105 Bit Score: 68.51 E-value: 2.35e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADaveeavhhWTVPSDPIAVQVSAAVLPGQQvQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ----GMG 326
Cdd:cd16921 1 LGQVLTNLLGNAIK--------FRRPRRPPRIEVGAEDVGEEW-TFYVRDNGIGIDPEYAEKVFGIFQRLHSReeyeGTG 71
|
90 100 110
....*....|....*....|....*....|....*.
gi 2772025463 327 LGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLP 362
Cdd:cd16921 72 VGLAIVRKIIERHGGRIWLESEPGE--GTTFYFTLP 105
|
|
| HATPase_DpiB-CitA-like |
cd16915 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
254-362 |
2.37e-13 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 DpiB, DcuS, and Bacillus subtilis CitS, DctS, and YufL; This family includes histidine kinase-like ATPase domains of Escherichia coli K-12 DpiB and DcuS, and Bacillus subtilis CitS, DctS and MalK histidine kinases (HKs) all of which are two component transduction systems (TCSs). E. coli K-12 DpiB (also known as CitA) is the histidine kinase (HK) of DpiA-DpiB, a two-component signal transduction system (TCS) required for the expression of citrate-specific fermentation genes and genes involved in plasmid inheritance. E. coli K-12 DcuS (also known as YjdH) is the HK of DcuS-DcuR, a TCS that in the presence of the extracellular C4-dicarboxlates, activates the expression of the genes of anaerobic fumarate respiration and of aerobic C4-dicarboxylate uptake. CitS is the HK of Bacillus subtilis CitS-CitT, a TCS which regulates expression of CitM, the Mg-citrate transporter. Bacillus subtilis DctS forms a tripartite sensor unit (DctS/DctA/DctB) for sensing C4 dicarboxylates. Bacillus subtilis MalK (also known as YfuL) is the HK of MalK-MalR (YufL-YufM) a TCS which regulates the expression of the malate transporters MaeN (YufR) and YflS, and is essential for utilization of malate in minimal medium. Proteins having this DpiB-CitA-like HATPase domain generally have sensor domains such as Cache and PAS, and a histidine kinase A (HisKA)-like SpoOB-type, alpha-helical domain.
Pssm-ID: 340392 [Multi-domain] Cd Length: 104 Bit Score: 65.39 E-value: 2.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 254 VLGNLLLNAADAVEEAvhhwTVPSDPIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQG-MGLGLSLC 332
Cdd:cd16915 4 IVGNLIDNALDALAAT----GAPNKQVEVFLRDE---GDDLVIEVRDTGPGIAPELRDKVFERGVSTKGQGeRGIGLALV 76
|
90 100 110
....*....|....*....|....*....|
gi 2772025463 333 RSMVESMGGRIWAQprNDGTTGAMFFITLP 362
Cdd:cd16915 77 RQSVERLGGSITVE--SEPGGGTTFSIRIP 104
|
|
| PRK09835 |
PRK09835 |
Cu(+)/Ag(+) sensor histidine kinase; |
130-362 |
1.72e-12 |
|
Cu(+)/Ag(+) sensor histidine kinase;
Pssm-ID: 182101 [Multi-domain] Cd Length: 482 Bit Score: 68.26 E-value: 1.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 130 TRMGNLGAlgaAIAHEVNQPLSAIVTSGNACQRWlNRQPPQLErahQALQRMLDQAERASNVINRVRGMARGEA----PN 205
Cdd:PRK09835 260 TRQSNFSA---DIAHEIRTPITNLITQTEIALSQ-SRSQKELE---DVLYSNLEELTRMAKMVSDMLFLAQADNnqliPE 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 206 LEAVDLDAVVQEMLPLIQARLAERHLQVRWtppVALPH-VWADKLQLQQVLGNLLLNAAdaveeavhHWTVPSDPIAVQV 284
Cdd:PRK09835 333 KKMLDLADEVGKVFDFFEAWAEERGVELRF---VGDPCqVAGDPLMLRRAISNLLSNAL--------RYTPAGEAITVRC 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 285 SAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP------QGMGLGLSLCRSMVESMGGRIWAQPRNDGTTgamFF 358
Cdd:PRK09835 402 QEV---DHQVQLVVENPGTPIAPEHLPRLFDRFYRVDPsrqrkgEGSGIGLAIVKSIVVAHKGTVAVTSDARGTR---FV 475
|
....
gi 2772025463 359 ITLP 362
Cdd:PRK09835 476 ISLP 479
|
|
| HATPase_BaeS-like |
cd16946 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
247-362 |
1.84e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BaeS HK of the BaeS/BaeR two-component regulatory system (TCS), which responds to envelope stress. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensory domain.
Pssm-ID: 340422 [Multi-domain] Cd Length: 109 Bit Score: 60.55 E-value: 1.84e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNAADAVEEAVhhwtvpsdpiAVQVSAAVLPgQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ--- 323
Cdd:cd16946 1 DRDRLQQLFVNLLENSLRYTDTGG----------KLRIRAAQTP-QEVRLDVEDSAPGVSDDQLARLFERFYRVESSrnr 69
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2772025463 324 ---GMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFITLP 362
Cdd:cd16946 70 asgGSGLGLAICHNIALAHGGTISAEHSPLG--GLRLVLTLP 109
|
|
| PRK11086 |
PRK11086 |
sensory histidine kinase DcuS; Provisional |
254-362 |
2.47e-11 |
|
sensory histidine kinase DcuS; Provisional
Pssm-ID: 236839 [Multi-domain] Cd Length: 542 Bit Score: 64.93 E-value: 2.47e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 254 VLGNLLLNAADAVEEAvhhwtvPSDPIAVQVSAavlpgQQVQL--TVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSL 331
Cdd:PRK11086 437 ILGNLIENALEAVGGE------EGGEISVSLHY-----RNGWLhcEVSDDGPGIAPDEIDAIFDKGYSTKGSNRGVGLYL 505
|
90 100 110
....*....|....*....|....*....|..
gi 2772025463 332 CRSMVESMGGRIWAQPR-NDGTTgamFFITLP 362
Cdd:PRK11086 506 VKQSVENLGGSIAVESEpGVGTQ---FFVQIP 534
|
|
| HATPase_Glnl-NtrB-like |
cd16918 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-362 |
3.16e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli GlnL (synonyms NtrB and NRII); This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs), similar to Escherichia coli GlnL/NtrB/NRII HK of the two-component regulatory system (TCS) GlnL/GlnG (NtrB-NtrC, or NRII-NRI), which regulates the transcription of genes encoding metabolic enzymes and permeases in response to carbon and nitrogen status in E. coli and related bacteria. Also included in this family are Rhodobacter capsulatus NtrB, Azospirillum brasilense NtrB, Vibrio alginolyticus NtrB, Rhizobium leguminosarum biovar phaseoli NtrB, and Herbaspirillum seropedicae NtrB. Escherichia coli GlnL/NtrB/NRII is both a kinase and a phosphatase, catalyzing the phosphorylation and dephosphorylation of GlnG/NtrC/NRI. The kinase and phosphatase activities of GlnL/NtrB/NRII are regulated by the PII signal transduction protein, which on binding to GlnL/NtrB/NRII, inhibits the kinase activity of GlnL/NtrB/NRII and activates the GlnL/NtrB/NRII phosphatase activity. Proteins having this HATPase domain also have a histidine kinase dimerization and phosphoacceptor domain (HisKA); some also contain PAS sensor domain(s).
Pssm-ID: 340395 [Multi-domain] Cd Length: 109 Bit Score: 59.72 E-value: 3.16e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEEAvHHWTVPSDPIAVQVSAAvLPGQQV--QLTVQDCGVGLPAAIAEHVFDAFWSTKPQGMGLG 328
Cdd:cd16918 1 LIQVFLNLVRNAAQALAGS-GGEIILRTRTQRQVTLG-HPRHRLalRVSVIDNGPGIPPDLQDTIFYPMVSGRENGTGLG 78
|
90 100 110
....*....|....*....|....*....|....*.
gi 2772025463 329 LSLCRSMVESMGGRIW--AQPRNdgttgAMFFITLP 362
Cdd:cd16918 79 LAIAQNIVSQHGGVIEcdSQPGH-----TVFSVSLP 109
|
|
| HATPase_BvrS-ChvG-like |
cd16953 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-362 |
5.06e-11 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Brucella abortus BvrS and Sinorhizobium meliloti ChvG; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Brucella abortus BvrS of the BvrR-BvrS two-component regulatory system (TCS), which controls cell invasion and intracellular survival, as well as Sinorhizobium meliloti and Agrobacterium tumefaciens ChvG of the ChvI-ChvG TCS necessary for endosymbiosis and pathogenicity in plants. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), an accessory HAMP sensor domain, a periplasmic stimulus-sensing domain, and some also have a sensor N-terminal transmembrane domain.
Pssm-ID: 340429 [Multi-domain] Cd Length: 110 Bit Score: 59.12 E-value: 5.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADaveeavhhwTVPSDPIAVQVSAAVlPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKP------QG 324
Cdd:cd16953 1 LGQVLRNLIGNAIS---------FSPPDTGRITVSAMP-TGKMVTISVEDEGPGIPQEKLESIFDRFYTERPaneafgQH 70
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2772025463 325 MGLGLSLCRSMVESMGGRIWAQPRN--DGTTGAMFFITLP 362
Cdd:cd16953 71 SGLGLSISRQIIEAHGGISVAENHNqpGQVIGARFTVQLP 110
|
|
| PRK10604 |
PRK10604 |
sensor protein RstB; Provisional |
133-366 |
4.20e-10 |
|
sensor protein RstB; Provisional
Pssm-ID: 236724 [Multi-domain] Cd Length: 433 Bit Score: 60.77 E-value: 4.20e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 133 GNLGALGA-------AIAHEVNQPLSAIvtsgnacqRW---LNRQPPQLERahQALQRMLDQAErasNVINRVRGMARGE 202
Cdd:PRK10604 203 DNINALIAskkqlidGIAHELRTPLVRL--------RYrleMSDNLSAAES--QALNRDIGQLE---ALIEELLTYARLD 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 203 AP----NLEAVDLDAVVQEMLPLIQARLAERHLQVRwTPPVALPHVwADKLQLQQVLGNLLLNAADAVEEAVHhwtvpsd 278
Cdd:PRK10604 270 RPqnelHLSEPDLPAWLSTHLADIQAVTPEKTVRLD-TPHQGDYGA-LDMRLMERVLDNLLNNALRYAHSRVR------- 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 279 piavqvSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ------GMGLGLSLCRSMVESMGGRIWAQPRNDGt 352
Cdd:PRK10604 341 ------VSLLLDGNQACLIVEDDGPGIPPEERERVFEPFVRLDPSrdratgGCGLGLAIVHSIALAMGGSVNCDESELG- 413
|
250
....*....|....
gi 2772025463 353 tGAMFFITLPLAYT 366
Cdd:PRK10604 414 -GARFSFSWPVWHN 426
|
|
| HATPase_CpxA-like |
cd16949 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-363 |
6.27e-10 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CpxA; This family includes the histidine kinase-like ATPase (HATPase) domains of two-component sensor histidine kinase (HKs) similar to Escherichia coli CpxA, HK of the CpxA-CpxR two-component regulatory system (TCS) which may function in acid stress and in cell wall stability. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA) and a HAMP sensor domain; some also contain a CpxA family periplasmic domain.
Pssm-ID: 340425 [Multi-domain] Cd Length: 104 Bit Score: 55.79 E-value: 6.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAADAVEEAVH-HWTVPSDpiavqvsaavlpgqQVQLTVQDCGVGLPAAIAEHVFDAFW------STKPQ 323
Cdd:cd16949 1 LARALENVLRNALRYSPSKILlDISQDGD--------------QWTITITDDGPGVPEDQLEQIFLPFYrvdsarDRESG 66
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 2772025463 324 GMGLGLSLCRSMVESMGGRIWAQprNDGTTGAMFFITLPL 363
Cdd:cd16949 67 GTGLGLAIAERAIEQHGGKIKAS--NRKPGGLRVRIWLPA 104
|
|
| PRK11466 |
PRK11466 |
hybrid sensory histidine kinase TorS; Provisional |
140-363 |
1.42e-08 |
|
hybrid sensory histidine kinase TorS; Provisional
Pssm-ID: 236914 [Multi-domain] Cd Length: 914 Bit Score: 56.45 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 140 AAIAHEVNQPLSAIVTSGNacqrwLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMARGEAPNlEAVDLDAVVQEML 219
Cdd:PRK11466 449 AAMSHEIRTPLYGILGTAQ-----LLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAGG-KNVSVSDEPFEPR 522
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 220 PLIQA--RLAERHLQVRwtpPVALPHVWADKL---------QLQQVLGNLLLNAADAVEEAVHHWTVPSDpiavqvsaav 288
Cdd:PRK11466 523 PLLEStlQLMSGRVKGR---PIRLATDIADDLptalmgdprRIRQVITNLLSNALRFTDEGSIVLRSRTD---------- 589
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2772025463 289 lpGQQVQLTVQDCGVGLPAAIAEHVFDAF--WSTKPQGMGLGLSLCRSMVESMGGRIWAQprNDGTTGAMFFITLPL 363
Cdd:PRK11466 590 --GEQWLVEVEDSGCGIDPAKLAEIFQPFvqVSGKRGGTGLGLTISSRLAQAMGGELSAT--STPEVGSCFCLRLPL 662
|
|
| PRK11107 |
PRK11107 |
hybrid sensory histidine kinase BarA; Provisional |
243-373 |
1.44e-08 |
|
hybrid sensory histidine kinase BarA; Provisional
Pssm-ID: 236848 [Multi-domain] Cd Length: 919 Bit Score: 56.40 E-value: 1.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 243 HVWADKLQLQQVLGNLLLNAADAVEeavhhwtvpSDPIAVQVSAAVLPGQQVQLTVQ--DCGVGLPAAIAEHVFDAF--- 317
Cdd:PRK11107 401 NVIGDPLRLQQIITNLVGNAIKFTE---------SGNIDILVELRALSNTKVQLEVQirDTGIGISERQQSQLFQAFrqa 471
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 318 ---WSTKPQGMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFITLPLAYTEHAIAQS 373
Cdd:PRK11107 472 dasISRRHGGTGLGLVITQKLVNEMGGDISFHSQpNRGST---FWFHLPLDLNPNPIIDG 528
|
|
| HisKA |
pfam00512 |
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine ... |
140-204 |
7.13e-08 |
|
His Kinase A (phospho-acceptor) domain; dimerization and phospho-acceptor domain of histidine kinases.
Pssm-ID: 459839 [Multi-domain] Cd Length: 66 Bit Score: 48.75 E-value: 7.13e-08
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2772025463 140 AAIAHEVNQPLSAIVTSGNACQRWlnrqpPQLERAHQALQRMLDQAERASNVINRVRGMARGEAP 204
Cdd:pfam00512 7 ANLSHELRTPLTAIRGYLELLRDE-----KLDEEQREYLETILRSAERLLRLINDLLDLSRIEAG 66
|
|
| glnL |
PRK11073 |
nitrogen regulation protein NR(II); |
142-343 |
7.57e-08 |
|
nitrogen regulation protein NR(II);
Pssm-ID: 182947 [Multi-domain] Cd Length: 348 Bit Score: 53.55 E-value: 7.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 142 IAHEVNQPLSAIVTSGNACQRWLnrqP-PQLeraHQALQRMLDQAERASNVINRVRGMARgeaPNLEAVD-LDAVVQEML 219
Cdd:PRK11073 137 LAHEIKNPLGGLRGAAQLLSKAL---PdPAL---TEYTKVIIEQADRLRNLVDRLLGPQR---PGTHVTEsIHKVAERVV 207
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 220 PLIQARLAERHLQVRWTPPvALPHVWADKLQLQQVLGNLLLNAADAVEEAVHHWTVPSDpIAVQVSaavLPGQQVQLT-- 297
Cdd:PRK11073 208 QLVSLELPDNVRLIRDYDP-SLPELAHDPDQIEQVLLNIVRNALQALGPEGGTITLRTR-TAFQLT---LHGERYRLAar 282
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2772025463 298 --VQDCGVGLPAAIAEHVFDAFWSTKPQGMGLGLSLCRSMVESMGGRI 343
Cdd:PRK11073 283 idIEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKI 330
|
|
| PRK11091 |
PRK11091 |
aerobic respiration control sensor protein ArcB; Provisional |
241-363 |
9.47e-08 |
|
aerobic respiration control sensor protein ArcB; Provisional
Pssm-ID: 236842 [Multi-domain] Cd Length: 779 Bit Score: 53.79 E-value: 9.47e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 241 LPH-VWADKLQLQQVLGNLLLNAADAVEEAvhhwtvpsdpiAVQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWS 319
Cdd:PRK11091 388 LPHkVITDGTRLRQILWNLISNAVKFTQQG-----------GVTVRVRYEEGDMLTFEVEDSGIGIPEDELDKIFAMYYQ 456
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2772025463 320 TKPQ-------GMGLGLSLCRSMVESMGGRIwaQPRNDGTTGAMFFITLPL 363
Cdd:PRK11091 457 VKDShggkpatGTGIGLAVSKRLAQAMGGDI--TVTSEEGKGSCFTLTIHA 505
|
|
| HATPase_CreC-like |
cd16945 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
247-351 |
1.07e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli CreC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Escherichia coli CreC of the CreC-CreB two-component regulatory system (TCS) involved in catabolic regulation. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and accessory sensory domain(s) such as HAMP, CACHE or PAS.
Pssm-ID: 340421 [Multi-domain] Cd Length: 106 Bit Score: 49.77 E-value: 1.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNAADaveeavhhWTVPSDPIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFWS-----TK 321
Cdd:cd16945 1 DPFLLRQAINNLLDNAID--------FSPEGGLIALQLEAD---TEGIELLVFDEGSGIPDYALNRVFERFYSlprphSG 69
|
90 100 110
....*....|....*....|....*....|
gi 2772025463 322 PQGMGLGLSLCRSMVESMGGRIWAQPRNDG 351
Cdd:cd16945 70 QKSTGLGLAFVQEVAQLHGGRITLRNRPDG 99
|
|
| HATPase_VanS-like |
cd16923 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
251-362 |
1.27e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Enterococcus faecium VanS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Enterococcus faecium VanS HK of the VanS-VanR two-component regulatory system (TCS) which activates the transcription of vanH, vanA and vanX vancomycin resistance genes. It also contains Ecoli YedV and PcoS, probable members of YedW-YedV TCS and PcoS-PcoR TCS, repectively. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); most also have a HAMP sensor domain.
Pssm-ID: 340400 [Multi-domain] Cd Length: 102 Bit Score: 49.31 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 251 LQQVLGNLLLNAAD-AVEEAVHHWTvpsdpiavqvsaAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFW----STKPQGM 325
Cdd:cd16923 1 LQRVFSNLLSNAIKySPENTRIYIT------------SFLTDDVVNIMFKNPSSHPLDFKLEKLFERFYrgdnSRNTEGA 68
|
90 100 110
....*....|....*....|....*....|....*..
gi 2772025463 326 GLGLSLCRSMVESMGGRIWAQPRNDGTTgamFFITLP 362
Cdd:cd16923 69 GLGLSIAKAIIELHGGSASAEYDDNHDL---FKVRLP 102
|
|
| HATPase_RstB-like |
cd16939 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
286-363 |
2.41e-07 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Salmonella typhimurium RstB; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Salmonella typhimurium RstB HK of the RstA-RstB two-component regulatory system (TCS), which regulates expression of the constituents participating in pyrimidine metabolism and iron acquisition, and may be required for regulation of Salmonella motility and invasion. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), and a HAMP sensor domain.
Pssm-ID: 340416 [Multi-domain] Cd Length: 104 Bit Score: 48.58 E-value: 2.41e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 286 AAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ------GMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMFFI 359
Cdd:cd16939 23 ALLVSGGRLTLIVEDDGPGIPAAARERVFEPFVRLDPSrdratgGFGLGLAIVHRVALWHGGHVECDDSELG--GACFRL 100
|
....
gi 2772025463 360 TLPL 363
Cdd:cd16939 101 TWPR 104
|
|
| HATPase_TutC-TodS-like |
cd16925 |
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas ... |
247-362 |
3.78e-07 |
|
Histidine kinase-like ATPase domain of hybrid sensor histidine kinases similar to Pseudomonas putida TodS and Thauera aromatica TutC; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component hybrid sensor histidine kinase (HKs) such Pseudomonas putida TodS HK of the TodS-TodT two-component regulatory system (TCS) which controls the expression of a toluene degradation pathway. Thauera aromatica TutC may be part of a TCS that is involved in anaerobic toluene metabolism. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA), PAS sensor domain(s) and a REC domain.
Pssm-ID: 340402 [Multi-domain] Cd Length: 110 Bit Score: 48.26 E-value: 3.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNAADAveeavhhwTVPSDPIAVQVSAAVLPGqqVQLTVQDCGVGLPAAIAEHVFDAFW------ST 320
Cdd:cd16925 1 DAEKYERVVLNLLSNAFKF--------TPDGGRIRCILEKFRLNR--FLLTVSDSGPGIPPNLREEIFERFRqgdgssTR 70
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 2772025463 321 KPQGMGLGLSLCRSMVESMGGRIWAQprNDGTTGAMFFITLP 362
Cdd:cd16925 71 AHGGTGLGLSIVKEFVELHGGTVTVS--DAPGGGALFQVELP 110
|
|
| PRK10841 |
PRK10841 |
two-component system sensor histidine kinase RcsC; |
247-363 |
4.14e-07 |
|
two-component system sensor histidine kinase RcsC;
Pssm-ID: 182772 [Multi-domain] Cd Length: 924 Bit Score: 51.90 E-value: 4.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNAADAVEeavhhwtvpSDPIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAFW------ST 320
Cdd:PRK10841 559 DPMRLQQVISNLLSNAIKFTD---------TGCIVLHVRVD---GDYLSFRVRDTGVGIPAKEVVRLFDPFFqvgtgvQR 626
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 2772025463 321 KPQGMGLGLSLCRSMVESMGGRIW--AQPrndgTTGAMFFITLPL 363
Cdd:PRK10841 627 NFQGTGLGLAICEKLINMMDGDISvdSEP----GMGSQFTIRIPL 667
|
|
| HATPase_Phy-like |
cd16932 |
Histidine kinase-like ATPase domain of plant phytochromes similar to Arabidopsis thaliana ... |
247-343 |
4.76e-07 |
|
Histidine kinase-like ATPase domain of plant phytochromes similar to Arabidopsis thaliana Phytochrome A, B, C, D and E; This family includes the histidine kinase-like ATPase (HATPase) domains of plant red/far-red photoreceptors, the phytochromes, and includes the Arabidopsis thaliana phytochrome family phyA-phyE. Following red light absorption, biologically inactive forms of phytochromes convert to active forms, which rapidly convert back to inactive forms upon far-red light irradiation. Phytochromes can be considered as having an N-terminal photosensory region to which a bilin chromophore is bound, and a C-terminal output region, which includes the HATPase domain represented here, and is involved in dimerization and presumably contributes to relaying the light signal to downstream signaling events.
Pssm-ID: 340409 [Multi-domain] Cd Length: 113 Bit Score: 48.04 E-value: 4.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 247 DKLQLQQVLGNLLLNaadaveeAVHHWTVPSDPIAVQVSaavlPGQQ----------VQLTVQDCGVGLPAAIAEHVFDa 316
Cdd:cd16932 3 DQIRLQQVLADFLLN-------AVRFTPSPGGWVEIKVS----PTKKqigdgvhvihLEFRITHPGQGLPEELVQEMFE- 70
|
90 100 110
....*....|....*....|....*....|
gi 2772025463 317 fwstKPQGM---GLGLSLCRSMVESMGGRI 343
Cdd:cd16932 71 ----ENQWTtqeGLGLSISRKLVKLMNGDV 96
|
|
| HisKA |
cd00082 |
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed ... |
135-200 |
5.39e-07 |
|
Histidine Kinase A (dimerization/phosphoacceptor) domain; Histidine Kinase A dimers are formed through parallel association of 2 domains creating 4-helix bundles; usually these domains contain a conserved His residue and are activated via trans-autophosphorylation by the catalytic domain of the histidine kinase. They subsequently transfer the phosphoryl group to the Asp acceptor residue of a response regulator protein. Two-component signalling systems, consisting of a histidine protein kinase that senses a signal input and a response regulator that mediates the output, are ancient and evolutionarily conserved signaling mechanisms in prokaryotes and eukaryotes.
Pssm-ID: 119399 [Multi-domain] Cd Length: 65 Bit Score: 46.44 E-value: 5.39e-07
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2772025463 135 LGALGAAIAHEVNQPLSAIvtSGNAcqRWLNRQPPQLERAHQALQRMLDQAERASNVINRVRGMAR 200
Cdd:cd00082 4 KGEFLANVSHELRTPLTAI--RGAL--ELLEEELLDDEEQREYLERIREEAERLLRLINDLLDLSR 65
|
|
| HisKA |
smart00388 |
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine ... |
140-204 |
1.29e-06 |
|
His Kinase A (phosphoacceptor) domain; Dimerisation and phosphoacceptor domain of histidine kinases.
Pssm-ID: 214644 [Multi-domain] Cd Length: 66 Bit Score: 45.25 E-value: 1.29e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2772025463 140 AAIAHEVNQPLSAIVTSGNACQRWlnrqpPQLERAHQALQRMLDQAERASNVINRVRGMARGEAP 204
Cdd:smart00388 7 ANLSHELRTPLTAIRGYLELLLDT-----ELSEEQREYLETILREAERLLRLINDLLDLSRIEAG 66
|
|
| PRK15347 |
PRK15347 |
two component system sensor kinase; |
142-343 |
2.12e-06 |
|
two component system sensor kinase;
Pssm-ID: 237951 [Multi-domain] Cd Length: 921 Bit Score: 49.64 E-value: 2.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 142 IAHEVNQPLSAIV--------TSGNACQRWLnrqppqLERAHQALQRMLDqaerasnVINRVRGMARGEAP----NLEAV 209
Cdd:PRK15347 405 ISHEIRTPLNGVLgalellqnTPLTAEQMDL------ADTARQCTLSLLA-------IINNLLDFSRIESGqmtlSLEET 471
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 210 DLDAVV-QEMLPlIQARLAERHLQVRW--TPPVALpHVWADKLQLQQVLGNLLLNAADAVEEAvhhwtvpsdpiAVQVSA 286
Cdd:PRK15347 472 ALLPLLdQAMLT-IQGPAQSKSLTLRTfvGAHVPL-YLHLDSLRLRQILVNLLGNAVKFTETG-----------GIRLRV 538
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2772025463 287 AVlPGQQVQLTVQDCGVGLPAAIAEHVFDAFW--STKPQGMGLGLSLCRSMVESMGGRI 343
Cdd:PRK15347 539 KR-HEQQLCFTVEDTGCGIDIQQQQQIFTPFYqaDTHSQGTGLGLTIASSLAKMMGGEL 596
|
|
| HATPase_BasS-like |
cd16940 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
244-348 |
2.61e-06 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli BasS; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) similar to Escherichia coli BasS HK of the BasS-BasR two-component regulatory system (TCS). Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some contain a HAMP sensory domain, while some an N-terminal two-component sensor kinase domain.
Pssm-ID: 340417 [Multi-domain] Cd Length: 113 Bit Score: 45.86 E-value: 2.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 244 VWADKLQLQQVLGNLLLNAadaveeavHHWTvpsdPIAVQVSAAVLPGQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ 323
Cdd:cd16940 7 VQGDALLLFLLLRNLVDNA--------VRYS----PQGSRVEIKLSADDGAVIRVEDNGPGIDEEELEALFERFYRSDGQ 74
|
90 100
....*....|....*....|....*...
gi 2772025463 324 ---GMGLGLSLCRSMVESMGGRIWAQPR 348
Cdd:cd16940 75 nygGSGLGLSIVKRIVELHGGQIFLGNA 102
|
|
| ComP |
COG4585 |
Signal transduction histidine kinase ComP [Signal transduction mechanisms]; |
142-364 |
2.77e-06 |
|
Signal transduction histidine kinase ComP [Signal transduction mechanisms];
Pssm-ID: 443642 [Multi-domain] Cd Length: 252 Bit Score: 48.08 E-value: 2.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 142 IAHE----VNQPLSAIVTSGNACQRWLNRQPpqlERAHQALQRMLDQAERAsnvINRVRGMARGEAP-NLEAVDLDAVVQ 216
Cdd:COG4585 57 IARElhdgVGQSLSAIKLQLEAARRLLDADP---EAAREELEEIRELAREA---LAELRRLVRGLRPpALDDLGLAAALE 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 217 EmlpLIQARLAERHLQVRWT---PPVALPHvwADKLQLQQVLGNLLLNAadaveeaVHHwtvpSDPIAVQVSAAVLPGQq 293
Cdd:COG4585 131 E---LAERLLRAAGIRVELDvdgDPDRLPP--EVELALYRIVQEALTNA-------LKH----AGATRVTVTLEVDDGE- 193
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2772025463 294 VQLTVQDCGVGLPAAiaehvfdafwSTKPQGMGLglslcRSM---VESMGGRIWAQPRNDGttGAMFFITLPLA 364
Cdd:COG4585 194 LTLTVRDDGVGFDPE----------AAPGGGLGL-----RGMrerAEALGGTLTIGSAPGG--GTRVRATLPLA 250
|
|
| COG3920 |
COG3920 |
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction ... |
176-364 |
8.47e-06 |
|
Two-component sensor histidine kinase, HisKA and HATPase domains [Signal transduction mechanisms];
Pssm-ID: 443125 [Multi-domain] Cd Length: 495 Bit Score: 47.59 E-value: 8.47e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 176 QALQRMldQAERASN---------VINRVRGMAR-----GEAPNLEAVDLDAVVQEMLPLIQARLAERHLQVRWT-PPVA 240
Cdd:COG3920 314 SSLLRL--QARRADDpearealeeSQNRIQALALvhellYQSEDWEGVDLRDYLRELLEPLRDSYGGRGIRIELDgPDVE 391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 241 LPhvwADKLQlqqVLGnLLLN--AADAVEEAVHHwtVPSDPIAVQVSAAvlpGQQVQLTVQDCGVGLPAAIaehvfdafw 318
Cdd:COG3920 392 LP---ADAAV---PLG-LILNelVTNALKHAFLS--GEGGRIRVSWRRE---DGRLRLTVSDNGVGLPEDV--------- 450
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2772025463 319 sTKPQGMGLGLSLCRSMVESMGGRIwaqpRNDGTTGAMFFITLPLA 364
Cdd:COG3920 451 -DPPARKGLGLRLIRALVRQLGGTL----ELDRPEGTRVRITFPLA 491
|
|
| HATPase_PhoQ-like |
cd16954 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
227-343 |
1.40e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG; This family includes histidine kinase-like ATPase (HATPase) domain of two-component sensor histidine kinases similar to Escherichia coli PhoQ and Providencia stuartii AarG. PhoQ is the histidine kinase (HK) of the PhoP-PhoQ two-component regulatory system (TCS), which responds to the levels of Mg2+ and Ca2+, controls virulence, mediates the adaptation to Mg2+-limiting environments, and regulates numerous cellular activities. Providencia stuartii AarG is a putative sensor kinase which controls the expression of the 2'-N-acetyltransferase and an intrinsic multiple antibiotic resistance (Mar) response in Providencia stuartii. The AarG product is similar to PhoQ in that it is able to restore wild-type levels of resistance to a Salmonella typhimurium phoQ mutant. However, the expression of the 2'-N-acetyltransferase gene and of aarP (a gene encoding a transcriptional activator of 2'-N-acetyltransferase) are not significantly affected by the levels of Mg2+ or Ca2+. Most proteins in this group contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have an accessory HAMP sensor domain, and some have an intracellular membrane -interaction PhoQ sensor domain.
Pssm-ID: 340430 [Multi-domain] Cd Length: 135 Bit Score: 44.16 E-value: 1.40e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 227 AERHLQVRWTPPVALPHVWaDKLQLQQVLGNLLLNAAD-AVEEavhhwtvpsdpiaVQVSAAVLPGQqVQLTVQDCGVGL 305
Cdd:cd16954 15 QRKGVSISLDISPELRFPG-ERNDLMELLGNLLDNACKwCLEF-------------VEVTARQTDGG-LHLIVDDDGPGV 79
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2772025463 306 PAAIAEHVF------DafwsTKPQGMGLGLSLCRSMVESMGGRI 343
Cdd:cd16954 80 PESQRSKIFqrgqrlD----EQRPGQGLGLAIAKEIVEQYGGEL 119
|
|
| PRK09959 |
PRK09959 |
acid-sensing system histidine kinase EvgS; |
140-371 |
2.67e-05 |
|
acid-sensing system histidine kinase EvgS;
Pssm-ID: 182169 [Multi-domain] Cd Length: 1197 Bit Score: 46.27 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 140 AAIAHEVNQPLSAI-----VTSGNACQRwlnrqppqlERAHQALQRMLDQAERASNVINRVRGMARGEAPNLEA----VD 210
Cdd:PRK09959 717 ATMSHEIRTPISSImgfleLLSGSGLSK---------EQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLqpqwVD 787
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 211 LDAVVQEMLPLIQARLAERHLQVRWTPPVALPH-VWADKLQLQQVLGNLLLNAADAVEEAVHHWTvpSDPIAVQVSAAVl 289
Cdd:PRK09959 788 IPTLVQNTCHSFGAIAASKSIALSCSSTFPDHYlVKIDPQAFKQVLSNLLSNALKFTTEGAVKIT--TSLGHIDDNHAV- 864
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 290 pgqqVQLTVQDCGVGLPAAIAEHVFDAFWST----KPQGMGLGLSLCRSMVESMGGRIWAQprNDGTTGAMFFITLPLAY 365
Cdd:PRK09959 865 ----IKMTIMDSGSGLSQEEQQQLFKRYSQTsagrQQTGSGLGLMICKELIKNMQGDLSLE--SHPGIGTTFTITIPVEI 938
|
....*.
gi 2772025463 366 TEHAIA 371
Cdd:PRK09959 939 SQQVAT 944
|
|
| HATPase_YcbM-like |
cd16947 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
294-361 |
4.95e-05 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis YcbM; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis YcbM, a HK of the two-component system YcbM-YcbL. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA).
Pssm-ID: 340423 [Multi-domain] Cd Length: 125 Bit Score: 42.50 E-value: 4.95e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2772025463 294 VQLTVQDCGVGLPAAIAEHVFDAFWSTKP------QGMGLGLSLCRSMVESMGGRIWAQPRNDGTTgaMFFITL 361
Cdd:cd16947 53 VYIDIWDKGKGISETEKDHVFERLYTLEDsrnsakQGNGLGLTITKRLAESMGGSIYVNSKPYEKT--VFTVTL 124
|
|
| PRK10549 |
PRK10549 |
two-component system sensor histidine kinase BaeS; |
207-363 |
6.09e-05 |
|
two-component system sensor histidine kinase BaeS;
Pssm-ID: 182539 [Multi-domain] Cd Length: 466 Bit Score: 44.62 E-value: 6.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 207 EAVDLDAVVQEMLPLIQARLAERHLQVRwtppVALPH---VWADKLQLQQVLGNLLLNAAdaveeavhHWTvpSDPIAVQ 283
Cdd:PRK10549 310 TPVDLVPLLEVAGGAFRERFASRGLTLQ----LSLPDsatVFGDPDRLMQLFNNLLENSL--------RYT--DSGGSLH 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 284 VSAAVLPgQQVQLTVQDCGVGLPAAIAEHVFDAFWSTKPQ------GMGLGLSLCRSMVESMGGRIWAQPRNDGttGAMF 357
Cdd:PRK10549 376 ISAEQRD-KTLRLTFADSAPGVSDEQLQKLFERFYRTEGSrnrasgGSGLGLAICLNIVEAHNGRIIAAHSPFG--GVSI 452
|
....*.
gi 2772025463 358 FITLPL 363
Cdd:PRK10549 453 TVELPL 458
|
|
| PRK10755 |
PRK10755 |
two-component system sensor histidine kinase PmrB; |
205-352 |
3.71e-04 |
|
two-component system sensor histidine kinase PmrB;
Pssm-ID: 236751 [Multi-domain] Cd Length: 356 Bit Score: 42.26 E-value: 3.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772025463 205 NLEAVDL-DAVVQEMLPLIQARLAERHLQVRWTPPVALPHVWADKLQLQQVLGNLLLNAadaveeavHHWTVPSDPIAVQ 283
Cdd:PRK10755 201 HYQTVKLlEDVILPSQDELSEMLEQRQQTLLLPESAADITVQGDATLLRLLLRNLVENA--------HRYSPEGSTITIK 272
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772025463 284 VSAAvlpGQQVQLTVQDCGVGLPAAIAEHVFDAF--WSTKPQGMGLGLSLCRSMVESMGGRIWAQPRNDGT 352
Cdd:PRK10755 273 LSQE---DGGAVLAVEDEGPGIDESKCGELSKAFvrMDSRYGGIGLGLSIVSRITQLHHGQFFLQNRQERS 340
|
|
| HATPase_BceS-YxdK-YvcQ-like |
cd16948 |
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to ... |
291-362 |
4.70e-04 |
|
Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ; This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.
Pssm-ID: 340424 [Multi-domain] Cd Length: 109 Bit Score: 39.19 E-value: 4.70e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2772025463 291 GQQVQLTVQDCGVGLPAAIAEHVFDAFWSTK-----PQGMGLGLSLCRSMVESMGGRIWAQPR-NDGTTgamFFITLP 362
Cdd:cd16948 35 EQGVVLSIKDFGIGIPEEDLPRVFDKGFTGEngrnfQESTGMGLYLVKKLCDKLGHKIDVESEvGEGTT---FTITFP 109
|
|
| |
