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Conserved domains on  [gi|2772037383|ref|WP_367238784|]
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FAD-binding and (Fe-S)-binding domain-containing protein [Pseudomonas soli]

Protein Classification

FAD-binding and (Fe-S)-binding domain-containing protein( domain architecture ID 11416044)

FAD-binding and (Fe-S)-binding domain-containing protein, where the N-terminal FAD-binding and the C-terminal (Fe-S)-binding domains may function as oxidoreductases

Gene Ontology:  GO:0050660|GO:0046872|GO:0051536|GO:0071949|GO:0016491

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GlcD COG0277
FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];
14-537 2.08e-136

FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];


:

Pssm-ID: 440046 [Multi-domain]  Cd Length: 462  Bit Score: 418.14  E-value: 2.08e-136
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   14 YPEFLDALKnSGFRGQISADYGTRTVLATD-NSIYQRLPHAAVFPLDVNDVARVATLMAEprfRDIKLTPRGGGTGTNGQ 92
Cdd:COG0277      3 TAALLAALR-AILAGRVLTDPADRAAYARDgNSLYRGRPDAVVRPRSTEDVAAVVRLAAE---HGVPVVPRGGGTGLAGG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   93 SL--TDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYG 170
Cdd:COG0277     79 AVplDGGVVLDLSR-MNRILEVDPEDRTATVEAGVTLADLNAALAPHGLFFPPDPSSQGTATIGGNIATNAGGPRSLKYG 157

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  171 KTRDHVLELHSVLLGGERLHSLPiddaaleqacaapgrvgevyrmareiqetqgeliestfpKLNRCLTGYDLAHLrddq 250
Cdd:COG0277    158 LTRDNVLGLEVVLADGEVVRTGG---------------------------------------RVPKNVTGYDLFWL---- 194

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  251 grfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMAH--KPLSIETVDSKVLMLamkdivw 328
Cdd:COG0277    195 --------LVGSEGTLGVITEATLRLHPLPEAVATALVAFPDLEAAAAAVRALLAAgiAPAALELMDRAALAL------- 259

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  329 hsVAEYFPADPERPTLGINLVEFCGDEPDEVNARVQAFVAHLQADKSVErlgHTLAEGAEAVTRVYVMRKRSVGLLGNVE 408
Cdd:COG0277    260 --VEAAPPLGLPEDGGALLLVEFDGDDAEEVEAQLARLRAILEAGGATD---VRVAADGAERERLWKARKAALPALGRLD 334

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  409 GEVRpqpFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYG 488
Cdd:COG0277    335 GGAK---LLEDVAVPPSRLPELLRELGALAAKYGLRATAFGHAGDGNLHVRILFDPADPEEVERARAAAEEIFDLVAELG 411

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2772037383  489 GLLWGEHGKGL-RSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPP 537
Cdd:COG0277    412 GSISGEHGIGRlKAEFLPAEYGPaALALLRRIKAAFDPDGILNPGKILPPP 462
GlpC COG0247
Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy ...
 490-1001 6.26e-78

Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy production and conversion];


:

Pssm-ID: 440017 [Multi-domain]  Cd Length: 420  Bit Score: 261.16  E-value: 6.26e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  490 LLWGEHGKGLRSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPPDSAEGLIPVDgvtlrgDLDRSIDERVWQSFG 568
Cdd:COG0247      1 LSGGHGGGLKAEHGTGRFMAPfLELELGKIKYAFDPDNKLNPGKIGLLNPGVELLGDGD------LHDKNLKTLPWKELL 74

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  569 SAVH-CNGNGACYnydpndAMCPSWKATRERQHSPKGRASLIREWLRlqgeanidvlaaaqrkaswlkglparlrnsraq 647
Cdd:COG0247     75 DALDaCVGCGFCR------AMCPSYKATGDEKDSPRGRINLLREVLE--------------------------------- 115

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  648 RQGQHDFSHEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPylahapglynavmg 727
Cdd:COG0247    116 GELPLDLSEEVYEVLDLCLTCKACETACPSGVDIADLIAEARAQLVERGGRPLRDRLLRTFPDRVP-------------- 181

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  728 skwvsrlladkvgmvdsplisrfnfqatltrcrvqvasvpalrelTPAQRERSIVLVQDAFTRYFETPLLASFIELAHRL 807
Cdd:COG0247    182 ---------------------------------------------AADKEGAEVLLFPGCFTNYFDPEIGKAAVRLLEAA 216

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  808 GHKVFLAP-YSANGKPLHVQGFLGAFAKAAVRNatqLKALADCGVP-LVGLDPAMTLVYRQEYQKVDGVECPS-VLLPQE 884
Cdd:COG0247    217 GVEVVLPPeELCCGAPALSKGDLDLARKLARRN---IEALERLGVKaIVTTCPSCGLTLKDEYPELLGDRVAFeVLDISE 293

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  885 WLMNVLPEQA-PFKADSFRLMAH--CTEKtNVPASTRQWEQVFARL-GLKLV--TEATGCCGMSGTYGHEARnqEVSKTI 958
Cdd:COG0247    294 FLAELILEGKlKLKPLGEKVTYHdpCHLG-RGGGVYDAPRELLKAIpGVEVVemPEDSGCCGGAGGYGFEEP--ELSMRI 370

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 2772037383  959 FEQsWATKLDKAGEA--LATGYSCRSQVKRMTEK---QLRHPLEVVLQ 1001
Cdd:COG0247    371 GER-KLEQIRATGADvvVTACPSCRTQLEDGTKEygiEVKHPVELLAE 417
 
Name Accession Description Interval E-value
GlcD COG0277
FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];
14-537 2.08e-136

FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];


Pssm-ID: 440046 [Multi-domain]  Cd Length: 462  Bit Score: 418.14  E-value: 2.08e-136
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   14 YPEFLDALKnSGFRGQISADYGTRTVLATD-NSIYQRLPHAAVFPLDVNDVARVATLMAEprfRDIKLTPRGGGTGTNGQ 92
Cdd:COG0277      3 TAALLAALR-AILAGRVLTDPADRAAYARDgNSLYRGRPDAVVRPRSTEDVAAVVRLAAE---HGVPVVPRGGGTGLAGG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   93 SL--TDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYG 170
Cdd:COG0277     79 AVplDGGVVLDLSR-MNRILEVDPEDRTATVEAGVTLADLNAALAPHGLFFPPDPSSQGTATIGGNIATNAGGPRSLKYG 157

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  171 KTRDHVLELHSVLLGGERLHSLPiddaaleqacaapgrvgevyrmareiqetqgeliestfpKLNRCLTGYDLAHLrddq 250
Cdd:COG0277    158 LTRDNVLGLEVVLADGEVVRTGG---------------------------------------RVPKNVTGYDLFWL---- 194

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  251 grfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMAH--KPLSIETVDSKVLMLamkdivw 328
Cdd:COG0277    195 --------LVGSEGTLGVITEATLRLHPLPEAVATALVAFPDLEAAAAAVRALLAAgiAPAALELMDRAALAL------- 259

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  329 hsVAEYFPADPERPTLGINLVEFCGDEPDEVNARVQAFVAHLQADKSVErlgHTLAEGAEAVTRVYVMRKRSVGLLGNVE 408
Cdd:COG0277    260 --VEAAPPLGLPEDGGALLLVEFDGDDAEEVEAQLARLRAILEAGGATD---VRVAADGAERERLWKARKAALPALGRLD 334

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  409 GEVRpqpFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYG 488
Cdd:COG0277    335 GGAK---LLEDVAVPPSRLPELLRELGALAAKYGLRATAFGHAGDGNLHVRILFDPADPEEVERARAAAEEIFDLVAELG 411

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2772037383  489 GLLWGEHGKGL-RSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPP 537
Cdd:COG0277    412 GSISGEHGIGRlKAEFLPAEYGPaALALLRRIKAAFDPDGILNPGKILPPP 462
GlpC COG0247
Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy ...
 490-1001 6.26e-78

Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy production and conversion];


Pssm-ID: 440017 [Multi-domain]  Cd Length: 420  Bit Score: 261.16  E-value: 6.26e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  490 LLWGEHGKGLRSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPPDSAEGLIPVDgvtlrgDLDRSIDERVWQSFG 568
Cdd:COG0247      1 LSGGHGGGLKAEHGTGRFMAPfLELELGKIKYAFDPDNKLNPGKIGLLNPGVELLGDGD------LHDKNLKTLPWKELL 74

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  569 SAVH-CNGNGACYnydpndAMCPSWKATRERQHSPKGRASLIREWLRlqgeanidvlaaaqrkaswlkglparlrnsraq 647
Cdd:COG0247     75 DALDaCVGCGFCR------AMCPSYKATGDEKDSPRGRINLLREVLE--------------------------------- 115

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  648 RQGQHDFSHEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPylahapglynavmg 727
Cdd:COG0247    116 GELPLDLSEEVYEVLDLCLTCKACETACPSGVDIADLIAEARAQLVERGGRPLRDRLLRTFPDRVP-------------- 181

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  728 skwvsrlladkvgmvdsplisrfnfqatltrcrvqvasvpalrelTPAQRERSIVLVQDAFTRYFETPLLASFIELAHRL 807
Cdd:COG0247    182 ---------------------------------------------AADKEGAEVLLFPGCFTNYFDPEIGKAAVRLLEAA 216

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  808 GHKVFLAP-YSANGKPLHVQGFLGAFAKAAVRNatqLKALADCGVP-LVGLDPAMTLVYRQEYQKVDGVECPS-VLLPQE 884
Cdd:COG0247    217 GVEVVLPPeELCCGAPALSKGDLDLARKLARRN---IEALERLGVKaIVTTCPSCGLTLKDEYPELLGDRVAFeVLDISE 293

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  885 WLMNVLPEQA-PFKADSFRLMAH--CTEKtNVPASTRQWEQVFARL-GLKLV--TEATGCCGMSGTYGHEARnqEVSKTI 958
Cdd:COG0247    294 FLAELILEGKlKLKPLGEKVTYHdpCHLG-RGGGVYDAPRELLKAIpGVEVVemPEDSGCCGGAGGYGFEEP--ELSMRI 370

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 2772037383  959 FEQsWATKLDKAGEA--LATGYSCRSQVKRMTEK---QLRHPLEVVLQ 1001
Cdd:COG0247    371 GER-KLEQIRATGADvvVTACPSCRTQLEDGTKEygiEVKHPVELLAE 417
FAD-oxidase_C pfam02913
FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold.
 279-533 4.23e-66

FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold.


Pssm-ID: 397178  Cd Length: 248  Bit Score: 222.58  E-value: 4.23e-66
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  279 IPKYAVLVNVRYTSFMDALRDANALMAHK--PLSIETVDSKVLMLAMKDIVWHSvaeyfpaDPERPTLGINLVEFCGDEP 356
Cdd:pfam02913    1 LPEVRAVALVGFPSFEAAVKAVREIARAGiiPAALELMDNDALDLVEATLGFPK-------GLPRDAAALLLVEFEGDDE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  357 DEVNARVQAFVAHLQADKSVERLGhtlAEGAEAVTRVYVMRKRSVGLlGNVEGEVRPQPFVEDTAVPPEQLADYIADFRA 436
Cdd:pfam02913   74 ETAEEELEAVEAILEAGGAGDVVV---ATDEAEAERLWAARKYALPL-RDALGGAGPAVFSEDVSVPRSRLADLVRDIKE 149

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  437 LLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGLLWGEHGKGL-RSEYVPEYFGE-LYPA 514
Cdd:pfam02913  150 LLDKYGLVVCLFGHAGDGNLHLYILFDFRDPEQEERAEKLFDEIMDLALELGGSISGEHGVGRdKKPYLEREFGEeGLAL 229

                          250
                   ....*....|....*....
gi 2772037383  515 LQRLKGAFDPHNQLNPGKI 533
Cdd:pfam02913  230 MRRIKAAFDPKGILNPGKV 248
glcD TIGR00387
glycolate oxidase, subunit GlcD; This protein, the glycolate oxidase GlcD subunit, is similar ...
 55-532 7.22e-51

glycolate oxidase, subunit GlcD; This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other]


Pssm-ID: 273050 [Multi-domain]  Cd Length: 413  Bit Score: 184.98  E-value: 7.22e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   55 VFPLDVNDVARVATLMAEPRfrdIKLTPRGGGTGTNGQSL-TDGIVVDLSRHMNSILEINVEQRWVRVQAGVVKDQLNAA 133
Cdd:TIGR00387    2 VFPKNTEQVARILKLCHEHR---IPIVPRGAGTGLSGGALpEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQA 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  134 LKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELHSVLLGGErlhslpiddaaleqacaapgrvgevy 213
Cdd:TIGR00387   79 VEEHNLFYPPDPSSQISSTIGGNIAENAGGMRGLKYGTTVDYVLGLEVVTADGE-------------------------- 132

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  214 rmareIQETQGELIestfpklnRCLTGYDLAHLrddqgrfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSF 293
Cdd:TIGR00387  133 -----ILRIGGKTA--------KDVAGYDLTGL------------FVGSEGTLGIVTEATLKLLPKPENIVVALAFFDSI 187

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  294 MDALRDANALMAHK--PLSIETVDSKVLMlamkdivwhSVAEYFPADPERPTLGINLVEFcgDEPDEVNARVQAFV-AHL 370
Cdd:TIGR00387  188 EKAMQAVYDIIAAGiiPAGMEFLDNLSIK---------AVEDISGIGLPKDAGAILLVEI--DGVHEAVERDEEKIeQIC 256

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  371 QADKSVErlgHTLAEGAEAVTRVYVMRKRSVGLLGnvegEVRPQPFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGH 450
Cdd:TIGR00387  257 RKNGAVD---VQIAQDEEERALLWAGRRNAFKAAS----KLSPLYLIEDGTVPRSKLPEALRGIADIASKYDFTIANFGH 329

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  451 VDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGLLWGEHGKGL-RSEYVPEYFGEL-YPALQRLKGAFDPHNQL 528
Cdd:TIGR00387  330 AGDGNLHPTILTDPEDKGEMERVEEAGGEIFELAIELGGTISGEHGIGVvKAEFMPYKFNEKeLETMRAIKKAFDPDNIL 409


                   ....
gi 2772037383  529 NPGK 532
Cdd:TIGR00387  410 NPGK 413
PLN02805 PLN02805
D-lactate dehydrogenase [cytochrome]
 16-536 8.44e-36

D-lactate dehydrogenase [cytochrome]


Pssm-ID: 178402 [Multi-domain]  Cd Length: 555  Bit Score: 144.00  E-value: 8.44e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   16 EFLDALKnSGFRGQISADYGTRTVLAT-DNSIYQ--RLPHAAVFPLDVNDVARVatLMAEPRFRdIKLTPRGGGTGTNGQ 92
Cdd:PLN02805    97 ELIDELK-AILQDNMTLDYDERYFHGKpQNSFHKavNIPDVVVFPRSEEEVSKI--VKSCNKYK-VPIVPYGGATSIEGH 172

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   93 SLT--DGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFApeLSTSNRATVGGMINTDASGQGSCTYG 170
Cdd:PLN02805   173 TLAphGGVCIDMSL-MKSVKALHVEDMDVVVEPGIGWLELNEYLEPYGLFFP--LDPGPGATIGGMCATRCSGSLAVRYG 249

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  171 KTRDHVLELHSVLLGGErlhslpiddaaleqacaapgrvgevyrmareiqetqgelIESTFPKLNRCLTGYDLAHLrddq 250
Cdd:PLN02805   250 TMRDNVISLKVVLPNGD---------------------------------------VVKTASRARKSAAGYDLTRL---- 286

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  251 grfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMahkpLSIETVdSKVLMLAMKDIVWHS 330
Cdd:PLN02805   287 --------VIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTIKDAADVAIATM----LSGIQV-SRVELLDEVQIRAIN 353

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  331 VAEYfPADPERPTLginLVEFCGdepDEVNARVQAFVAHLQADKSvERLGHTLAEGAEAVTRVYVMRKRSvgLLGNVEGE 410
Cdd:PLN02805   354 MANG-KNLPEAPTL---MFEFIG---TEAYAREQTLIVQKIASKH-NGSDFVFAEEPEAKKELWKIRKEA--LWACFAME 423

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  411 VRPQPFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGL 490
Cdd:PLN02805   424 PKYEAMITDVCVPLSHLAELISRSKKELDASPLVCTVIAHAGDGNFHTIILFDPSQEDQRREAERLNHFMVHTALSMEGT 503

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 2772037383  491 LWGEHGKGL-RSEYVPEYFG-ELYPALQRLKGAFDPHNQLNPGKICTP 536
Cdd:PLN02805   504 CTGEHGVGTgKMKYLEKELGiEALQTMKRIKKALDPNNIMNPGKLIPP 551
glpC PRK11168
anaerobic glycerol-3-phosphate dehydrogenase subunit C;
656-998 1.60e-19

anaerobic glycerol-3-phosphate dehydrogenase subunit C;


Pssm-ID: 236869 [Multi-domain]  Cd Length: 396  Bit Score: 91.85  E-value: 1.60e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  656 HEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPGLYNAVMGSKWVSRLL 735
Cdd:PRK11168    47 ALYDESLKYCSNCKRCEVACPSGVKIGDIIQRARAKYVTERGPPLRDRILSHTDLMGSLATPFAPLVNAATGLKPVRWLL 126

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  736 ADKVGmVDS--PLiSRFNFQATLTRCRVQVASVPalreltpaQRERSIVLVQDAFTRYFETPLLASFIELAHRLGHKVFL 813
Cdd:PRK11168   127 EKTLG-IDHrrPL-PKYAFGTFRRWYRKQAAQQA--------QYKKQVAYFHGCYVNYNHPQLGKDLVKVLNAMGYEVLL 196

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  814 APYSANGKPLHVQGFLGAFAKAAVRNATQLKALADCGVPLVGLDPAMTLVYRQEYQKVDGVECPSVL----LPQEWLMNV 889
Cdd:PRK11168   197 PKEKCCGLPLIANGFLDKARKQAEFNVESLREAIEKGIPVIATSSSCTLTLRDEYPELLGVDNAGVRdhieDATEFLRRL 276

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  890 L--PEQAPFKADSFRLMAH--C-TEKTnvpASTRQWEQVFARL-GLKLVTEATGCCGMSGTYGHEARN----QEVSKTIF 959
Cdd:PRK11168   277 LdqGKLLPLKPLPLKVAYHtpChLEKQ---GWGLYTLELLRLIpGLEVVVLDSQCCGIAGTYGFKKEKyetsQAIGAPLF 353

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....
gi 2772037383  960 EQswatkLDKAGEALA-----TgysCRSQVKRMTEKQLRHPLEV 998
Cdd:PRK11168   354 RQ-----IEESGADLVvtdceT---CKWQIEMSTGLECEHPITL 389
 
Name Accession Description Interval E-value
GlcD COG0277
FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];
14-537 2.08e-136

FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion];


Pssm-ID: 440046 [Multi-domain]  Cd Length: 462  Bit Score: 418.14  E-value: 2.08e-136
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   14 YPEFLDALKnSGFRGQISADYGTRTVLATD-NSIYQRLPHAAVFPLDVNDVARVATLMAEprfRDIKLTPRGGGTGTNGQ 92
Cdd:COG0277      3 TAALLAALR-AILAGRVLTDPADRAAYARDgNSLYRGRPDAVVRPRSTEDVAAVVRLAAE---HGVPVVPRGGGTGLAGG 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   93 SL--TDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYG 170
Cdd:COG0277     79 AVplDGGVVLDLSR-MNRILEVDPEDRTATVEAGVTLADLNAALAPHGLFFPPDPSSQGTATIGGNIATNAGGPRSLKYG 157

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  171 KTRDHVLELHSVLLGGERLHSLPiddaaleqacaapgrvgevyrmareiqetqgeliestfpKLNRCLTGYDLAHLrddq 250
Cdd:COG0277    158 LTRDNVLGLEVVLADGEVVRTGG---------------------------------------RVPKNVTGYDLFWL---- 194

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  251 grfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMAH--KPLSIETVDSKVLMLamkdivw 328
Cdd:COG0277    195 --------LVGSEGTLGVITEATLRLHPLPEAVATALVAFPDLEAAAAAVRALLAAgiAPAALELMDRAALAL------- 259

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  329 hsVAEYFPADPERPTLGINLVEFCGDEPDEVNARVQAFVAHLQADKSVErlgHTLAEGAEAVTRVYVMRKRSVGLLGNVE 408
Cdd:COG0277    260 --VEAAPPLGLPEDGGALLLVEFDGDDAEEVEAQLARLRAILEAGGATD---VRVAADGAERERLWKARKAALPALGRLD 334

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  409 GEVRpqpFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYG 488
Cdd:COG0277    335 GGAK---LLEDVAVPPSRLPELLRELGALAAKYGLRATAFGHAGDGNLHVRILFDPADPEEVERARAAAEEIFDLVAELG 411

                          490       500       510       520       530
                   ....*....|....*....|....*....|....*....|....*....|.
gi 2772037383  489 GLLWGEHGKGL-RSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPP 537
Cdd:COG0277    412 GSISGEHGIGRlKAEFLPAEYGPaALALLRRIKAAFDPDGILNPGKILPPP 462
GlpC COG0247
Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy ...
 490-1001 6.26e-78

Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF [Energy production and conversion];


Pssm-ID: 440017 [Multi-domain]  Cd Length: 420  Bit Score: 261.16  E-value: 6.26e-78
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  490 LLWGEHGKGLRSEYVPEYFGE-LYPALQRLKGAFDPHNQLNPGKICTPPDSAEGLIPVDgvtlrgDLDRSIDERVWQSFG 568
Cdd:COG0247      1 LSGGHGGGLKAEHGTGRFMAPfLELELGKIKYAFDPDNKLNPGKIGLLNPGVELLGDGD------LHDKNLKTLPWKELL 74

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  569 SAVH-CNGNGACYnydpndAMCPSWKATRERQHSPKGRASLIREWLRlqgeanidvlaaaqrkaswlkglparlrnsraq 647
Cdd:COG0247     75 DALDaCVGCGFCR------AMCPSYKATGDEKDSPRGRINLLREVLE--------------------------------- 115

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  648 RQGQHDFSHEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPylahapglynavmg 727
Cdd:COG0247    116 GELPLDLSEEVYEVLDLCLTCKACETACPSGVDIADLIAEARAQLVERGGRPLRDRLLRTFPDRVP-------------- 181

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  728 skwvsrlladkvgmvdsplisrfnfqatltrcrvqvasvpalrelTPAQRERSIVLVQDAFTRYFETPLLASFIELAHRL 807
Cdd:COG0247    182 ---------------------------------------------AADKEGAEVLLFPGCFTNYFDPEIGKAAVRLLEAA 216

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  808 GHKVFLAP-YSANGKPLHVQGFLGAFAKAAVRNatqLKALADCGVP-LVGLDPAMTLVYRQEYQKVDGVECPS-VLLPQE 884
Cdd:COG0247    217 GVEVVLPPeELCCGAPALSKGDLDLARKLARRN---IEALERLGVKaIVTTCPSCGLTLKDEYPELLGDRVAFeVLDISE 293

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  885 WLMNVLPEQA-PFKADSFRLMAH--CTEKtNVPASTRQWEQVFARL-GLKLV--TEATGCCGMSGTYGHEARnqEVSKTI 958
Cdd:COG0247    294 FLAELILEGKlKLKPLGEKVTYHdpCHLG-RGGGVYDAPRELLKAIpGVEVVemPEDSGCCGGAGGYGFEEP--ELSMRI 370

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 2772037383  959 FEQsWATKLDKAGEA--LATGYSCRSQVKRMTEK---QLRHPLEVVLQ 1001
Cdd:COG0247    371 GER-KLEQIRATGADvvVTACPSCRTQLEDGTKEygiEVKHPVELLAE 417
FAD-oxidase_C pfam02913
FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold.
 279-533 4.23e-66

FAD linked oxidases, C-terminal domain; This domain has a ferredoxin-like fold.


Pssm-ID: 397178  Cd Length: 248  Bit Score: 222.58  E-value: 4.23e-66
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  279 IPKYAVLVNVRYTSFMDALRDANALMAHK--PLSIETVDSKVLMLAMKDIVWHSvaeyfpaDPERPTLGINLVEFCGDEP 356
Cdd:pfam02913    1 LPEVRAVALVGFPSFEAAVKAVREIARAGiiPAALELMDNDALDLVEATLGFPK-------GLPRDAAALLLVEFEGDDE 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  357 DEVNARVQAFVAHLQADKSVERLGhtlAEGAEAVTRVYVMRKRSVGLlGNVEGEVRPQPFVEDTAVPPEQLADYIADFRA 436
Cdd:pfam02913   74 ETAEEELEAVEAILEAGGAGDVVV---ATDEAEAERLWAARKYALPL-RDALGGAGPAVFSEDVSVPRSRLADLVRDIKE 149

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  437 LLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGLLWGEHGKGL-RSEYVPEYFGE-LYPA 514
Cdd:pfam02913  150 LLDKYGLVVCLFGHAGDGNLHLYILFDFRDPEQEERAEKLFDEIMDLALELGGSISGEHGVGRdKKPYLEREFGEeGLAL 229

                          250
                   ....*....|....*....
gi 2772037383  515 LQRLKGAFDPHNQLNPGKI 533
Cdd:pfam02913  230 MRRIKAAFDPKGILNPGKV 248
glcD TIGR00387
glycolate oxidase, subunit GlcD; This protein, the glycolate oxidase GlcD subunit, is similar ...
 55-532 7.22e-51

glycolate oxidase, subunit GlcD; This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity. [Energy metabolism, Other]


Pssm-ID: 273050 [Multi-domain]  Cd Length: 413  Bit Score: 184.98  E-value: 7.22e-51
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   55 VFPLDVNDVARVATLMAEPRfrdIKLTPRGGGTGTNGQSL-TDGIVVDLSRHMNSILEINVEQRWVRVQAGVVKDQLNAA 133
Cdd:TIGR00387    2 VFPKNTEQVARILKLCHEHR---IPIVPRGAGTGLSGGALpEEGGLVLVFKHMNKILEIDVVNLTAVVQPGVRNLELEQA 78

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  134 LKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELHSVLLGGErlhslpiddaaleqacaapgrvgevy 213
Cdd:TIGR00387   79 VEEHNLFYPPDPSSQISSTIGGNIAENAGGMRGLKYGTTVDYVLGLEVVTADGE-------------------------- 132

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  214 rmareIQETQGELIestfpklnRCLTGYDLAHLrddqgrfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSF 293
Cdd:TIGR00387  133 -----ILRIGGKTA--------KDVAGYDLTGL------------FVGSEGTLGIVTEATLKLLPKPENIVVALAFFDSI 187

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  294 MDALRDANALMAHK--PLSIETVDSKVLMlamkdivwhSVAEYFPADPERPTLGINLVEFcgDEPDEVNARVQAFV-AHL 370
Cdd:TIGR00387  188 EKAMQAVYDIIAAGiiPAGMEFLDNLSIK---------AVEDISGIGLPKDAGAILLVEI--DGVHEAVERDEEKIeQIC 256

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  371 QADKSVErlgHTLAEGAEAVTRVYVMRKRSVGLLGnvegEVRPQPFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGH 450
Cdd:TIGR00387  257 RKNGAVD---VQIAQDEEERALLWAGRRNAFKAAS----KLSPLYLIEDGTVPRSKLPEALRGIADIASKYDFTIANFGH 329

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  451 VDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGLLWGEHGKGL-RSEYVPEYFGEL-YPALQRLKGAFDPHNQL 528
Cdd:TIGR00387  330 AGDGNLHPTILTDPEDKGEMERVEEAGGEIFELAIELGGTISGEHGIGVvKAEFMPYKFNEKeLETMRAIKKAFDPDNIL 409


                   ....
gi 2772037383  529 NPGK 532
Cdd:TIGR00387  410 NPGK 413
FAD_binding_4 pfam01565
FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most ...
 51-190 9.31e-38

FAD binding domain; This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidizes the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan.


Pssm-ID: 426326 [Multi-domain]  Cd Length: 139  Bit Score: 138.10  E-value: 9.31e-38
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   51 PHAAVFPLDVNDVARVatlMAEPRFRDIKLTPRGGGTGTNGQS-LTDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQ 129
Cdd:pfam01565    1 PAAVVLPESEEEVAAI---VRLANENGLPVLPRGGGSSLLGGAvQTGGIVLDLSR-LNGILEIDPEDGTATVEAGVTLGD 76

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2772037383  130 LNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELHSVLLGGERLH 190
Cdd:pfam01565   77 LVRALAAKGLLLGLDPGSGIPGTVGGAIATNAGGYGSEKYGLTRDNVLGLEVVLADGEVVR 137
PLN02805 PLN02805
D-lactate dehydrogenase [cytochrome]
 16-536 8.44e-36

D-lactate dehydrogenase [cytochrome]


Pssm-ID: 178402 [Multi-domain]  Cd Length: 555  Bit Score: 144.00  E-value: 8.44e-36
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   16 EFLDALKnSGFRGQISADYGTRTVLAT-DNSIYQ--RLPHAAVFPLDVNDVARVatLMAEPRFRdIKLTPRGGGTGTNGQ 92
Cdd:PLN02805    97 ELIDELK-AILQDNMTLDYDERYFHGKpQNSFHKavNIPDVVVFPRSEEEVSKI--VKSCNKYK-VPIVPYGGATSIEGH 172

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   93 SLT--DGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFApeLSTSNRATVGGMINTDASGQGSCTYG 170
Cdd:PLN02805   173 TLAphGGVCIDMSL-MKSVKALHVEDMDVVVEPGIGWLELNEYLEPYGLFFP--LDPGPGATIGGMCATRCSGSLAVRYG 249

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  171 KTRDHVLELHSVLLGGErlhslpiddaaleqacaapgrvgevyrmareiqetqgelIESTFPKLNRCLTGYDLAHLrddq 250
Cdd:PLN02805   250 TMRDNVISLKVVLPNGD---------------------------------------VVKTASRARKSAAGYDLTRL---- 286

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  251 grfnlnsvLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDANALMahkpLSIETVdSKVLMLAMKDIVWHS 330
Cdd:PLN02805   287 --------VIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPTIKDAADVAIATM----LSGIQV-SRVELLDEVQIRAIN 353

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  331 VAEYfPADPERPTLginLVEFCGdepDEVNARVQAFVAHLQADKSvERLGHTLAEGAEAVTRVYVMRKRSvgLLGNVEGE 410
Cdd:PLN02805   354 MANG-KNLPEAPTL---MFEFIG---TEAYAREQTLIVQKIASKH-NGSDFVFAEEPEAKKELWKIRKEA--LWACFAME 423

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  411 VRPQPFVEDTAVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGL 490
Cdd:PLN02805   424 PKYEAMITDVCVPLSHLAELISRSKKELDASPLVCTVIAHAGDGNFHTIILFDPSQEDQRREAERLNHFMVHTALSMEGT 503

                          490       500       510       520
                   ....*....|....*....|....*....|....*....|....*...
gi 2772037383  491 LWGEHGKGL-RSEYVPEYFG-ELYPALQRLKGAFDPHNQLNPGKICTP 536
Cdd:PLN02805   504 CTGEHGVGTgKMKYLEKELGiEALQTMKRIKKALDPNNIMNPGKLIPP 551
PRK11230 PRK11230
glycolate oxidase subunit GlcD; Provisional
 45-532 7.56e-24

glycolate oxidase subunit GlcD; Provisional


Pssm-ID: 183043 [Multi-domain]  Cd Length: 499  Bit Score: 106.78  E-value: 7.56e-24
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   45 SIYQRLPHAAVFPldvNDVARVATLMAEPRFRDIKLTPRGGGTGTNGQS--LTDGIVVDLSRhMNSILEINVEQRWVRVQ 122
Cdd:PRK11230    50 SAYRTRPLLVVLP---KQMEQVQALLAVCHRLRVPVVARGAGTGLSGGAlpLEKGVLLVMAR-FNRILDINPVGRRARVQ 125

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  123 AGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELHSVLLGGERLhSLPIDdaaleqA 202
Cdd:PRK11230   126 PGVRNLAISQAAAPHGLYYAPDPSSQIACSIGGNVAENAGGVHCLKYGLTVHNLLKVEILTLDGEAL-TLGSD------A 198

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  203 CAAPGrvgevyrmareiqetqgeliestfpklnrcltgydlahlrddqgrFNLNSVLCGAEGSLGYVVEAKLNVLPIPKY 282
Cdd:PRK11230   199 LDSPG---------------------------------------------FDLLALFTGSEGMLGVVTEVTVKLLPKPPV 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  283 AVLVNVRYTSFMDALRDANALMAHK--PLSIETVDSkVLMLAMKDIVwHsvAEYfPADPErptlGINLVEFCGDEPD--E 358
Cdd:PRK11230   234 ARVLLASFDSVEKAGLAVGDIIAAGiiPGGLEMMDN-LSIRAAEDFI-H--AGY-PVDAE----AILLCELDGVESDvqE 304

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  359 VNARVQAFVAHlqADKSVERLGHTLAEGAeavtRVYVMRKRSVGLLGNVEgevrPQPFVEDTAVPPEQLADYIADFRALL 438
Cdd:PRK11230   305 DCERVNDILLK--AGATDVRLAQDEAERV----RFWAGRKNAFPAVGRIS----PDYYCMDGTIPRRELPGVLEGIARLS 374

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  439 DGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAVAALTKSYGGLLWGEHGKGLR--SEYVPEYFGELYPALQ 516
Cdd:PRK11230   375 QQYGLRVANVFHAGDGNMHPLILFDANEPGELERAEALGGKILELCVEVGGSITGEHGVGREkiNQMCAQFNSDEITLFH 454

                          490
                   ....*....|....*.
gi 2772037383  517 RLKGAFDPHNQLNPGK 532
Cdd:PRK11230   455 AVKAAFDPDGLLNPGK 470
glpC PRK11168
anaerobic glycerol-3-phosphate dehydrogenase subunit C;
656-998 1.60e-19

anaerobic glycerol-3-phosphate dehydrogenase subunit C;


Pssm-ID: 236869 [Multi-domain]  Cd Length: 396  Bit Score: 91.85  E-value: 1.60e-19
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  656 HEVYDAMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPGLYNAVMGSKWVSRLL 735
Cdd:PRK11168    47 ALYDESLKYCSNCKRCEVACPSGVKIGDIIQRARAKYVTERGPPLRDRILSHTDLMGSLATPFAPLVNAATGLKPVRWLL 126

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  736 ADKVGmVDS--PLiSRFNFQATLTRCRVQVASVPalreltpaQRERSIVLVQDAFTRYFETPLLASFIELAHRLGHKVFL 813
Cdd:PRK11168   127 EKTLG-IDHrrPL-PKYAFGTFRRWYRKQAAQQA--------QYKKQVAYFHGCYVNYNHPQLGKDLVKVLNAMGYEVLL 196

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  814 APYSANGKPLHVQGFLGAFAKAAVRNATQLKALADCGVPLVGLDPAMTLVYRQEYQKVDGVECPSVL----LPQEWLMNV 889
Cdd:PRK11168   197 PKEKCCGLPLIANGFLDKARKQAEFNVESLREAIEKGIPVIATSSSCTLTLRDEYPELLGVDNAGVRdhieDATEFLRRL 276

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383  890 L--PEQAPFKADSFRLMAH--C-TEKTnvpASTRQWEQVFARL-GLKLVTEATGCCGMSGTYGHEARN----QEVSKTIF 959
Cdd:PRK11168   277 LdqGKLLPLKPLPLKVAYHtpChLEKQ---GWGLYTLELLRLIpGLEVVVLDSQCCGIAGTYGFKKEKyetsQAIGAPLF 353

                          330       340       350       360
                   ....*....|....*....|....*....|....*....|....
gi 2772037383  960 EQswatkLDKAGEALA-----TgysCRSQVKRMTEKQLRHPLEV 998
Cdd:PRK11168   354 RQ-----IEESGADLVvtdceT---CKWQIEMSTGLECEHPITL 389
PLN02465 PLN02465
L-galactono-1,4-lactone dehydrogenase
 79-165 1.86e-07

L-galactono-1,4-lactone dehydrogenase


Pssm-ID: 215258 [Multi-domain]  Cd Length: 573  Bit Score: 54.86  E-value: 1.86e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   79 KLTPRGGGTGTNGQSLTDGIVVDLSrHMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFaPELSTSNRATVGGMIN 158
Cdd:PLN02465   122 RIRPVGSGLSPNGLAFSREGMVNLA-LMDKVLEVDKEKKRVTVQAGARVQQVVEALRPHGLTL-QNYASIREQQIGGFIQ 199


                   ....*..
gi 2772037383  159 TDASGQG 165
Cdd:PLN02465   200 VGAHGTG 206
GLDHase TIGR01676
galactonolactone dehydrogenase; This model represents L-Galactono-gamma-lactone dehydrogenase ...
 57-166 2.67e-06

galactonolactone dehydrogenase; This model represents L-Galactono-gamma-lactone dehydrogenase (EC 1.3.2.3). This enzyme catalyzes the final step in ascorbic acid biosynthesis in higher plants. This protein is homologous to ascorbic acid biosynthesis enzymes of other species: L-gulono-gamma-lactone oxidase in rat and L-galactono-gamma-lactone oxidase in yeast. All three covalently bind the cofactor FAD.


Pssm-ID: 130737 [Multi-domain]  Cd Length: 541  Bit Score: 51.22  E-value: 2.67e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   57 PLDVNDVARVATLMAEPRFRdikLTPRGGGTGTNGQSLTDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKP 136
Cdd:TIGR01676   68 PEAIEELEGIVKQANEKKAR---IRPVGSGLSPNGIGLSRAGMVNLAL-MDKVLEVDEEKKRVRVQAGIRVQQLVDAIKE 143

                           90       100       110
                   ....*....|....*....|....*....|
gi 2772037383  137 HGLFFApELSTSNRATVGGMINTDASGQGS 166
Cdd:TIGR01676  144 YGITLQ-NFASIREQQIGGIIQVGAHGTGA 172
PLN02441 PLN02441
cytokinin dehydrogenase
 28-164 6.63e-05

cytokinin dehydrogenase


Pssm-ID: 215242 [Multi-domain]  Cd Length: 525  Bit Score: 46.83  E-value: 6.63e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   28 GQISADYGTRTVLATD-NSIYQRLPHAAVFPLDVNDVARVATLMAEPRFrDIKLTPRGGGTGTNGQSLT-DGIVVD---L 102
Cdd:PLN02441    41 GHLSFDPVSTASASKDfGNLVHSLPAAVLYPSSVEDIASLVRAAYGSSS-PLTVAARGHGHSLNGQAQApGGVVVDmrsL 119

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2772037383  103 SRHMNSILEINV--EQRWVRVQAGVV-KDQLNAALKpHGLffAPELSTSN-RATVGGMI-NTDASGQ 164
Cdd:PLN02441   120 RGGVRGPPVIVVsgDGPYVDVSGGELwIDVLKATLK-HGL--APRSWTDYlYLTVGGTLsNAGISGQ 183
FAD_lactone_ox TIGR01678
sugar 1,4-lactone oxidases; This model represents a family of at least two different sugar 1,4 ...
 63-182 3.05e-04

sugar 1,4-lactone oxidases; This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1.


Pssm-ID: 273751 [Multi-domain]  Cd Length: 438  Bit Score: 44.50  E-value: 3.05e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2772037383   63 VARVATLMAEPRFRDIKLTPRGGGTGTNGQSLTDGIVVDLSRhMNSILEINVEQRWVRVQAGVVKDQLNAALKPHGLFFa 142
Cdd:TIGR01678   24 VEEVREVLALAREQKKKVKVVGGGHSPSDIACTDGFLIHLDK-MNKVLQFDKEKKQITVEAGIRLYQLHEQLDEHGYSM- 101

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|
gi 2772037383  143 PELSTSNRATVGGMIntdasgqGSCTYGKTRDHVLELHSV 182
Cdd:TIGR01678  102 SNLGSISEVSVAGII-------STGTHGSSIKHGILATQV 134
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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