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Conserved domains on  [gi|2770826053|gb|XCX10648|]
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ATP synthase F0 subunit 6 (mitochondrion) [Culex quinquefasciatus]

Protein Classification

ATP synthase F0 subunit 6( domain architecture ID 10009593)

ATP synthase F0 subunit 6 is part of the mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V), which produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-226 1.92e-116

ATP synthase F0 subunit 6; Provisional


:

Pssm-ID: 214441  Cd Length: 223  Bit Score: 330.98  E-value: 1.92e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTiFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNgHNGSTLMFISLFSL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  81 IMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2770826053 161 RLTANMIAGHLLMTLLGNTGPMSTSYIILSLILvTQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 226
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILIL-IQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-226 1.92e-116

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 330.98  E-value: 1.92e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTiFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNgHNGSTLMFISLFSL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  81 IMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2770826053 161 RLTANMIAGHLLMTLLGNTGPMSTSYIILSLILvTQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 226
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILIL-IQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-226 1.83e-56

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.94  E-value: 1.83e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   5 LFSVFDPST-TIFNLSLNWLSTFLGLLII----PTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNgSTLMFISLFS 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  80 LIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2770826053 160 VRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 226
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-223 2.84e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 145.62  E-value: 2.84e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  69 GSTLMFISLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2770826053 149 ISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVtQIALLVLESAVAIIQSYVFAVLSTLYSS 223
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLL-PVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP-synt_A pfam00119
ATP synthase A chain;
22-223 2.44e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.82  E-value: 2.44e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  22 WLSTFLGLLIIPTSYW----LMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMFISLFSLIMFNNFLGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  95 TSTSHLTLTLSLAFPLWLSFMLYGWISH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2770826053 174 TLLGNTGP--MSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSS 223
Cdd:pfam00119 165 LLLAGLIFalLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-221 3.29e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 95.53  E-value: 3.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  38 LMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMFiSLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLY 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 118 GWISH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLIlvtQ 196
Cdd:COG0356   105 GIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL---P 180

                         170       180
                  ....*....|....*....|....*
gi 2770826053 197 IALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:COG0356   181 VAWTAFELLVGFLQAYIFTMLTAVY 205
 
Name Accession Description Interval E-value
ATP6 MTH00157
ATP synthase F0 subunit 6; Provisional
 1-226 1.92e-116

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214441  Cd Length: 223  Bit Score: 330.98  E-value: 1.92e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTiFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNgHNGSTLMFISLFSL 80
Cdd:MTH00157    1 MMTNLFSIFDPSTS-FNLSLNWLSTFLGLLFIPSSFWLIPSRYNILWNKILKTLHKEFKTLLGPK-NKGSTLIFISLFSF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  81 IMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00157   79 ILFNNFLGLFPYIFTSTSHLSLTLSLALPLWLSFMLFGWINNTNHMFAHLVPQGTPPILMPFMVLIETISNLIRPGTLAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2770826053 161 RLTANMIAGHLLMTLLGNTGPMSTSYIILSLILvTQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 226
Cdd:MTH00157  159 RLAANMIAGHLLLTLLGNTGPSLSSMILSILIL-IQILLLILESAVAIIQSYVFSVLSTLYSSEVN 223
ATP6 MTH00176
ATP synthase F0 subunit 6; Provisional
 1-225 2.53e-57

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214449  Cd Length: 229  Bit Score: 181.38  E-value: 2.53e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTIF--NLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNnILITLHKEFKTLLGPNGHNGSTLMFISLF 78
Cdd:MTH00176    1 MLVDLFSSFDPPNKNIfsMISLSWITLLLFLLLMPSSVWFCPSKLQVFML-MFSTFLPEMILRSNGSYILGSASIIISLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  79 SLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00176   80 ILVMSLNLSGLIPYVFTSTSHLVITLSLALPLWLGVILSGFINNFYSRLSHLVPQGTPPLLNPFLVLIELVSLLIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2770826053 159 AVRLTANMIAGHLLMTLLGN--TGPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSEV 225
Cdd:MTH00176  160 AVRLAANLSAGHLLLGLLGAamWGLLPVSPLIGFLLLIVQILYFMFEIAVCMIQAYVFTLLLSLYLDEH 228
ATP_synt_6_or_A TIGR01131
ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be ...
 5-226 1.83e-56

ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Bacterial forms should be designated ATP synthase, F0 subunit A; eukaryotic (chloroplast and mitochondrial) forms should be designated ATP synthase, F0 subunit 6. The F1/F0 ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and mitochondria and chloroplast. This enzyme is principally involved in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. Individual subunits in each of these clusters are named differently in prokaryotes and in organelles e.g., mitochondria and chloroplast. The bacterial equivalent of subunit 6 is named subunit 'A'. It has been shown that proton is conducted though this subunit. Typically, deprotonation and reprotonation of the acidic amino acid side-chains are implicated in the process. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273458  Cd Length: 226  Bit Score: 178.94  E-value: 1.83e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   5 LFSVFDPST-TIFNLSLNWLSTFLGLLII----PTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNgSTLMFISLFS 79
Cdd:TIGR01131   1 LFSQFDISPiTLFSLTLLSLILLLSLLIFlissSLSRWLIPSRWQNLMESIYEFVLSIVKSQIGGKKGK-FFPLIFTLFL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  80 LIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:TIGR01131  80 FILISNLLGLIPYSFTPTSHLSFTLGLALPLWLGLTISGFRKHPKGFLAHLVPSGTPLPLIPFLVIIETISYLARPISLS 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2770826053 160 VRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSEVN 226
Cdd:TIGR01131 160 VRLFANISAGHLLLTLLSGLLFSLMSSAIFALLLLILVALIILEIFVAFIQAYVFTLLTCLYLNDAL 226
ATP-synt_Fo_a_6 cd00310
ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms ...
 69-223 2.84e-44

ATP synthase Fo complex, subunit 6 (eukaryotes) and subunit a (prokaryotes); Bacterial forms are designated as ATP synthase, Fo complex, subunit a; eukaryotic (chloroplast and mitochondrial) forms are designated as ATP synthase, Fo complex, subunit 6. The F-ATP synthases (also called FoF1-ATPases) consist of two structural domains: F1 (factor one) complex containing the soluble catalytic core, and Fo (oligomycin sensitive factor) complex containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. F-ATP synthases are primarily found in the inner membranes of eukaryotic mitochondria, in the thylakoid membranes of chloroplasts or in the plasma membranes of bacteria. F-ATP synthase has also been found in the archaea Methanosarcina acetivorans. F-ATP synthases are the primary producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). Alternatively, under conditions of low driving force, ATP synthases function as ATPases, thus generating a transmembrane proton or Na(+) gradient at the expense of energy derived from ATP hydrolysis.


Pssm-ID: 349411 [Multi-domain]  Cd Length: 156  Bit Score: 145.62  E-value: 2.84e-44
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  69 GSTLMFISLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIET 148
Cdd:cd00310     3 KYLPLLGTLFLFILFSNLLGLIPYSFTPTSHLNVTLALALIVFLGVHILGIKKHGLGFFLHFLPPGTPLPLAPLMVPIEL 82

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2770826053 149 ISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVtQIALLVLESAVAIIQSYVFAVLSTLYSS 223
Cdd:cd00310    83 ISELIRPLSLSVRLFANMFAGHLLLALLSGLVPSLLSSVGLLPLLL-PVALTLLELFVAFIQAYVFTLLTAVYIS 156
ATP6 MTH00173
ATP synthase F0 subunit 6; Provisional
 1-224 6.19e-43

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214448  Cd Length: 231  Bit Score: 144.62  E-value: 6.19e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTIFNL--SLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGhNGSTLMFISLF 78
Cdd:MTH00173    1 MMVDLFSSFDDHNSSFSSlsFLMWLLSLMSLFFFSSSVWVSSSNLSSVFKLFVLTVSSQVTRSSGLNL-GGFSLLLSSLF 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  79 SLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00173   80 LFLISLNLSGLLPFVFSVTSHLAFTFSLALPLWLSLILSGLFYNPSKSLAGLVPAGAPAGLNPFLVLIETVSILIRPLTL 159

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2770826053 159 AVRLTANMIAGHLLMTLLGNT---GPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00173  160 TVRLLANISAGHIVLTLIGNYlssSLFSSSVVSLLLVLLIQVGYFIFEVAVMLIQAYIFTLLIKLYSDE 228
ATP6 MTH00005
ATP synthase F0 subunit 6; Provisional
 1-224 1.14e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 164583  Cd Length: 231  Bit Score: 143.72  E-value: 1.14e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDPSTTIFNLSLN----WLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNgHNGSTLMFIS 76
Cdd:MTH00005    1 MLTDIFSSFDPATNSLFNNLSstafWAFNFSIILLLSSSFWITPNRLSSIMSPPKSTMHTQLSRTFGKH-LKGFSSLISA 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  77 LFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPG 156
Cdd:MTH00005   80 LFTMIILMNLSGLLPYVFSTSSHLIFTLTLGLPLWLSLIMSSVTFSPKKFAAHLLPGGAPDWLNPFLVLIETISILVRPI 159

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 157 TLAVRLTANMIAGHLLMTLLG--NTGPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00005  160 TLSFRLAANMSAGHIVLSLIGiyAASALFSSISSTILLILTQMGYILFEVGICLIQAYIFCLLLSLYSDD 229
ATP6 MTH00179
ATP synthase F0 subunit 6; Provisional
 1-224 2.78e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177230  Cd Length: 227  Bit Score: 142.78  E-value: 2.78e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDpSTTIFNLSLNWLSTFLGLLIIPTSYWLMP-NRFQVIWNNILITLHKEFKTLLGPNGHNGStLMFISLFS 79
Cdd:MTH00179    1 MMLSMFDQFE-SPSLLGIPLLALALLLPWLLFPSLTNRWLnNRLSTLQSWFFGSFTFQLMQPINKKGHKWA-VLFLSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  80 LIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:MTH00179   79 FLLTLNLLGLLPYTFTPTTQLSLNLGLALPLWLGTVLYGLFNQPTIALAHLLPEGTPTPLIPMLVWIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2770826053 160 VRLTANMIAGHLLMTLLGNT--GPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00179  159 VRLTANITAGHLLMHLISSAvfVLMNFMGMVALLTLLVLFLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00120
ATP synthase F0 subunit 6; Provisional
 1-224 7.03e-42

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177181  Cd Length: 227  Bit Score: 141.50  E-value: 7.03e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDpSTTIFNLSLNWLSTFLGLLIIPT-SYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNGStLMFISLFS 79
Cdd:MTH00120    1 MNLNFFDQFS-SPELLGIPLILLAMLIPALLIPSpKNRLLTNRLTTLQLWLIKLITKQLMLPLNKKGHKWA-LILTSLML 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  80 LIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:MTH00120   79 LLLLINLLGLLPYTFTPTTQLSMNMALAIPLWLATVLTGLRNQPTTSLAHLLPEGTPTPLIPALILIETISLLIRPLALG 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2770826053 160 VRLTANMIAGHLLMTLLGNT--GPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00120  159 VRLTANLTAGHLLIQLISTAtlNLLPTMPTLSLLTLIILLLLTILELAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00035
ATP synthase F0 subunit 6; Validated
 3-224 5.47e-41

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177110  Cd Length: 229  Bit Score: 139.34  E-value: 5.47e-41
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   3 TNLFSVFDPsTTIFNLSLNWLSTFLGL---LIIPTSYWLmPNRFQVIWNNILITLHKEFKTLLGPNgHNGSTLMFISLFS 79
Cdd:MTH00035    5 NSIFGQFSP-DTILFIPLTLLSSVIALswlFFINPTNWL-PSRSQSIWLTFRQEILKLIFQNTNPN-TAPWAGLLTTVFI 81

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  80 LIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLA 159
Cdd:MTH00035   82 LILSINVLGLFPYAFTSTSHISLTYSLGIPLWMSVNILGFYLAFNSRLSHLVPQGTPSFLIPLMVWIETLSLFAQPIALG 161

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2770826053 160 VRLTANMIAGHLLMTLLGNT-GPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00035  162 LRLAANLTAGHLLIFLLSTAiWELSNSPLISIITLIIFFLLFILEIGVACIQAYVFTALVHFYLEQ 227
ATP6 MTH00101
ATP synthase F0 subunit 6; Validated
 1-221 2.21e-40

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177163  Cd Length: 226  Bit Score: 137.78  E-value: 2.21e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFDpSTTIFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNGStLMFISLFSL 80
Cdd:MTH00101    1 MNENLFASFI-TPTILGLPIVTLIIMFPSLLFPTPNRLINNRLISIQQWLIQLTSKQMMTIHNTKGQTWS-LMLMSLILF 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  81 IMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAV 160
Cdd:MTH00101   79 IGSTNLLGLLPHSFTPTTQLSMNLGMAIPLWAGTVITGFRNKTKASLAHFLPQGTPTPLIPMLVIIETISLFIQPMALAV 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2770826053 161 RLTANMIAGHLLMTLLGNT--GPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:MTH00101  159 RLTANITAGHLLIHLIGGAtlALMSISTTTALITFIILILLTILEFAVALIQAYVFTLLVSLY 221
ATP6 MTH00073
ATP synthase F0 subunit 6; Provisional
 1-224 3.67e-37

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177144  Cd Length: 227  Bit Score: 129.70  E-value: 3.67e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFdPSTTIFNLSLNWLSTFLGLLII--PTSYWLmPNRFQVIWNNILITLHKEFKTLLGPNGHNGStLMFISLF 78
Cdd:MTH00073    1 MNLSFFDQF-LSPTLLGIPLIMLAMLLPWLLFptPTNKWL-NNRLSTLQIWFLQNFTKQLMLPLNTPGHKWA-LILTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  79 SLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00073   78 VFLITMNLLGLLPYTFTPTTQLSLNLGLAVPLWLATVLIGLRNQPTASLGHLLPEGTPTLLIPILIIIETISLFIRPLAL 157

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2770826053 159 AVRLTANMIAGHLLMTLLGNTGP--MSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00073  158 GVRLTANLTAGHLLIQLISTATLvlLPLMPTVSILTMIVLFLLTLLEIAVAMIQAYVFVLLLSLYLQE 225
ATP6 MTH00132
ATP synthase F0 subunit 6; Provisional
 1-224 2.16e-35

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177190  Cd Length: 227  Bit Score: 124.99  E-value: 2.16e-35
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   1 MMTNLFSVFdPSTTIFNLSLNWLSTFLGLLIIPT--SYWLMpNRFQVIWNNILITLHKEFKTLLGPNGHNGStLMFISLF 78
Cdd:MTH00132    1 MTLSFFDQF-MSPTYLGIPLIALALTLPWILFPTptSRWLN-NRLLTLQGWFINRFTQQLLLPLNVGGHKWA-LLLTSLM 77

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  79 SLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTL 158
Cdd:MTH00132   78 LFLITLNMLGLLPYTFTPTTQLSLNMGLAVPLWLATVIIGMRNQPTHALGHLLPEGTPTPLIPVLIIIETISLFIRPLAL 157

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 159 AVRLTANMIAGHLLMTLLGNTG----PMSTSYIILSLILVtqIALLVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00132  158 GVRLTANLTAGHLLIQLIATAAfvllPLMPTVAILTATLL--FLLTLLEVAVAMIQAYVFVLLLSLYLQE 225
ATP-synt_A pfam00119
ATP synthase A chain;
22-223 2.44e-32

ATP synthase A chain;


Pssm-ID: 459679 [Multi-domain]  Cd Length: 216  Bit Score: 116.82  E-value: 2.44e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  22 WLSTFLGLLIIPTSYW----LMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMFISLFSLIMFNNFLGLF---PYIF 94
Cdd:pfam00119   5 LIVALILLLFLLLATRktkkLVPGRLQNFVEMLVEFVDNIVKDNIGKKKGRKFFPLLLTLFFFILVSNLLGLIpksPGGF 84

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  95 TSTSHLTLTLSLAFPLWLSFMLYGWISH-TQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLM 173
Cdd:pfam00119  85 TVTADINVTLALALIVFLLVHYYGIKKHgLGGYFKKLFVPPVPLPLVPLLLPIEIISEFARPVSLSLRLFGNMLAGHLLL 164

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|..
gi 2770826053 174 TLLGNTGP--MSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLYSS 223
Cdd:pfam00119 165 LLLAGLIFalLSAGFLLGVIPPLLGVAWTLFELLVAFIQAYVFTMLTAVYIS 216
ATP6 MTH00172
ATP synthase F0 subunit 6; Provisional
 15-221 9.67e-29

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 214447  Cd Length: 232  Bit Score: 107.82  E-value: 9.67e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  15 IFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMfISLFSLIMFNNFLGLFPYIF 94
Cdd:MTH00172   17 LTNSSIMMILVIIVVLLLFKGIKLIPKRWQSIIEIIYNHFHGVVKDNLGNEGLKYFPFI-ISLFFFIVFLNLLGLFPYVF 95

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  95 TSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLMT 174
Cdd:MTH00172   96 TPTTHIVVTLGLSFSIIIGVTLAGFWRFKWDFFSILMPSGAPLGLAPLLVLIETVSYISRAISLGVRLAANLSAGHLLFA 175

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 2770826053 175 LLGNTG-PMSTSYIILSLI-LVTQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:MTH00172  176 ILAGFGfNMLCASGFLSLFpLLIMVFITLLEIAVAVIQAYVFCLLTTIY 224
ATP6 MTH00175
ATP synthase F0 subunit 6; Provisional
 10-221 5.60e-27

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177228  Cd Length: 244  Bit Score: 103.55  E-value: 5.60e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  10 DPSTTIFNLSLNWLSTFLGLLIIPTSYWLMPNRFQVIWNNILITLHKEFKTLLGPNGhNGSTLMFISLFSLIMFNNFLGL 89
Cdd:MTH00175   23 DWLVTFTNSSMMMVLAVIIFWLLLKGDKLIPNRWQSIMELIYLNIRSVVHDNLGKSG-QKYFPFILSLFLFIAILNILGL 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  90 FPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAG 169
Cdd:MTH00175  102 FPYVFTPTAHIIITFGLSLSIIIAVTLLGFLTFKWNFLSILMPGGAPLVLAPFLVLIETLSYLIRAISLGVRLAANISAG 181

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 2770826053 170 HLLMTLL-GNTGPM-STSYIILSLILVT-QIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:MTH00175  182 HLLFAILsGFAFNMlSNGLIILSLFPMLiMIFITLLEMAVAVIQAYVFCLLTTIY 236
AtpB COG0356
FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP ...
 38-221 3.29e-24

FoF1-type ATP synthase, membrane subunit a [Energy production and conversion]; FoF1-type ATP synthase, membrane subunit a is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440125 [Multi-domain]  Cd Length: 212  Bit Score: 95.53  E-value: 3.29e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  38 LMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMFiSLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLY 117
Cdd:COG0356    26 LVPGGLQNFVEMLVEFVRNQVKDTIGKKGRKFAPLLL-TLFLFILVSNLLGLIPGLFPPTADINVTLALALIVFVLVHYY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 118 GWISH-TQHMFAHLVPQGTPPvLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLIlvtQ 196
Cdd:COG0356   105 GIKKKgLGGYLKHLFFPPFPW-LAPLMLPIEIISELARPLSLSLRLFGNMFAGHIILLLLAGLAPFLLLGVLSLLL---P 180

                         170       180
                  ....*....|....*....|....*
gi 2770826053 197 IALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:COG0356   181 VAWTAFELLVGFLQAYIFTMLTAVY 205
PRK05815 PRK05815
F0F1 ATP synthase subunit A; Validated
 9-221 2.51e-21

F0F1 ATP synthase subunit A; Validated


Pssm-ID: 235617  Cd Length: 227  Bit Score: 88.31  E-value: 2.51e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053   9 FDPSTTIFNLSLNWLSTFLGLLIIPTSYWLM-------PNRFQVIWNNILITLHKEFKTLLGPNGHNgSTLMFISLFSLI 81
Cdd:PRK05815    5 LIIGFGGFNFDSLLLSVLLGVLILLLFALVAtrklsgvPGGLQNFVEMIVEFVRGQVKDNIGGKGKK-FAPLAFTLFLFI 83

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  82 MFNNFLGLFP-YIFTSTSHLTLTLSLAFPLWLSFMLYGWISH-TQHMFAHLVPQgtppvLMPFMVCIETISNVIRPGTLA 159
Cdd:PRK05815   84 LLMNLLGLIPyLLFPPTADINVTLALALIVFVLVIYYGIKKKgLGGYLKEFYLQ-----PHPLLLPIEIISEFSRPISLS 158

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2770826053 160 VRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILvtQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:PRK05815  159 LRLFGNMLAGELILALIALLGGAGLLLALAPLIL--PVAWTIFEIFVGTLQAYIFMMLTIVY 218
ATP6 MTH00174
ATP synthase F0 subunit 6; Provisional
 38-221 4.70e-21

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 133799  Cd Length: 252  Bit Score: 88.07  E-value: 4.70e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  38 LMPNRFQVIWNNILITLHKEFKTLLGPNGHNGSTLMfISLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLY 117
Cdd:MTH00174   59 LVPNRILVGLELIYSHFYTVLKDNLGNKGGNYLAFV-LSLFILILFGNGLGLFPYVFTPTVHMVITLGLSFAIIVGTTLA 137

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 118 GWISHTQHMFAHLVPQGTPPVLMPFMVCIETISNVIRPGTLAVRLTANMIAGHLLMTLLG-------NTGPMSTSYIILS 190
Cdd:MTH00174  138 GLITFRFNFFSILMPQGAPLALAPLLTIIETLSYISRAISLGVRLAANISSGHLLFSIIAsfawkmiNTGILIGSFVPFA 217

                         170       180       190
                  ....*....|....*....|....*....|.
gi 2770826053 191 LIlvtqIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:MTH00174  218 IL----IFVTILEMAVAIIQAYVFTLLTIVY 244
PRK13419 PRK13419
F0F1 ATP synthase subunit A; Provisional
 75-221 1.34e-13

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237381  Cd Length: 342  Bit Score: 68.62  E-value: 1.34e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  75 ISLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFplwLSFMLYGWISHTQH----MFAHLVpQGTPPVLMPFMVCIETIS 150
Cdd:PRK13419  175 LTVFFFILVCNLLGLVPYGATATGNINVTLTLAV---FTFFITQYAAIKAHgikgYLAHLT-GGTHWSLWIIMIPIEFIG 250

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2770826053 151 NVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLILVT-QIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:PRK13419  251 LFTKPFALTVRLFANMTAGHIVILSLIFISFILKSYIVAVAVSVPfAIFIYLLELFVAFLQAYIFTMLSALF 322
PRK13417 PRK13417
F0F1 ATP synthase subunit A; Provisional
 95-221 4.10e-10

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237380  Cd Length: 352  Bit Score: 58.75  E-value: 4.10e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  95 TSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFMVCIETI-SNVIRPGTLAVRLTANMIAGHLLM 173
Cdd:PRK13417  217 TVTGDISVTMTLALLTMFLIYGAGFSYQGPKFIWHSVPNGVPLLLYPIMWPLEFIvSPMAKTFALTVRLLANMTAGHVII 296

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*...
gi 2770826053 174 TLLGNTGPMSTSYIILSLILVTQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:PRK13417  297 LALMGFIFQFQSWGIVPVSVIGSGLIYVLEIFVAFLQAYIFVLLTSLF 344
ATP6 MTH00087
ATP synthase F0 subunit 6; Provisional
 70-224 2.08e-09

ATP synthase F0 subunit 6; Provisional


Pssm-ID: 177152  Cd Length: 195  Bit Score: 55.37  E-value: 2.08e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  70 STLMFISLFSLIMFNnFLGLFPYIFTSTSHLTLTLSLAFPLWLSfMLYGWISHTQhMFAHLVPQGTPPVLMPF-MVCIET 148
Cdd:MTH00087   52 SVISFFTFIVLLLFC-FGGLFPYSFSPCGMVEFTFLYALVAWLS-TFLSFLSKSE-KFSVYLSKGSDSFLKTFsMLFVEI 128

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2770826053 149 ISNVIRPGTLAVRLTANMIAGHLLMTLLGNtgpMSTSYIILSLILVtqiallVLESAVAIIQSYVFAVLSTLYSSE 224
Cdd:MTH00087  129 VSELSRPLALTLRLTVNLMVGHLISSLLNF---LGEKYVWLSILAI------MMECFVAFIQSYIFSRLIYLYLNE 195
PRK13420 PRK13420
F0F1 ATP synthase subunit A; Provisional
 38-221 5.47e-08

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237382 [Multi-domain]  Cd Length: 226  Bit Score: 51.67  E-value: 5.47e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  38 LMPNRFQVIWNNILITLHKEFKTLLgpNGHNGSTLMFI-SLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFML 116
Cdd:PRK13420   43 LDPGRFQVALEGVVSTIEDAIKEVL--PRHARLVLPFVgTLWIFILVANLIGLIPGFHSPTADLSVTAALALLVFFSVHW 120

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053 117 YG-----WISHTQHmfaHLVPQgtpPVLMPFMVcietISNVIRPGTLAVRLTANMiaghllmtllgntgpMSTSYIILSL 191
Cdd:PRK13420  121 FGiraegLREYLKH---YLSPS---PFLLPFHL----ISEITRTLALAVRLFGNI---------------MSLELAALLV 175

                         170       180       190
                  ....*....|....*....|....*....|....
gi 2770826053 192 ILV----TQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:PRK13420  176 LLVagflVPVPILMLHIIEALVQAYIFGMLALIY 209
ATP6 MTH00050
ATP synthase F0 subunit 6; Validated
 65-193 6.70e-06

ATP synthase F0 subunit 6; Validated


Pssm-ID: 177125  Cd Length: 170  Bit Score: 44.87  E-value: 6.70e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  65 NGHNGSTLMFISLFSLIMFnnFLGL-FPYIFTSTSHLTLTLSLAFPLWLSFMLYGWISHTQHMFAHLVPQGTPPVLMPFM 143
Cdd:MTH00050   18 LGGSVSYYYSVVLFIVLFL--FLLYrLPYIYSPFLFVVFLFVVVFPLFISLFLSRVFDSLNEFFSSFVPVGTPLYICPFV 95

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 2770826053 144 VCIETISNVIRPGTLAVRLTANMIAGHLLMTLLGNTGPMSTSYIILSLIL 193
Cdd:MTH00050   96 CIAETISYIIRPVVLILRPFINISLGCFGGVALGNLCFISYWWFLVLFFL 145
PRK13421 PRK13421
F0F1 ATP synthase subunit A; Provisional
 76-221 5.85e-03

F0F1 ATP synthase subunit A; Provisional


Pssm-ID: 237383  Cd Length: 223  Bit Score: 36.60  E-value: 5.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826053  76 SLFSLIMFNNFLGLFPYIFTSTSHLTLTLSLAFPLWLSFMLYGwiSHTQHMFAHLVPQGTPPVLMPFMVCIETISnviRP 155
Cdd:PRK13421   83 TLFLFVLVANWSSLVPGVEPPTAHLETDAALALIVFLATIYYG--VRARGVRGYLATFAEPTWVMIPLNLVEQLT---RT 157

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2770826053 156 GTLAVRLTANMIAGHLLMTllgntgpmstsyIILSLI-LVTQIALLVLESAVAIIQSYVFAVLSTLY 221
Cdd:PRK13421  158 FSLIVRLFGNVMSGVFVIG------------IVLSLAgLLVPIPLMALDLLTGAVQAYIFAVLAMVF 212
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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