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Conserved domains on  [gi|2770826055|gb|XCX10650|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Culex quinquefasciatus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009588)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 3-116 9.67e-40

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 128.44  E-value: 9.67e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 3-116 9.67e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 128.44  E-value: 9.67e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 2.64e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 2.64e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055  20 MMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSSNLLNWsITSLFFIF 99
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2770826055 100 ILLIGLYHEWNQGALE 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-116 4.52e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.63  E-value: 4.52e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWsITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:COG0838    85 RELGWFGL-IEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 3-116 9.67e-40

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 128.44  E-value: 9.67e-40
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:MTH00148    2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDREKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00148   82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDW 115
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 4-116 1.91e-39

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 127.59  E-value: 1.91e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   4 ILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIK 83
Cdd:MTH00161    1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2770826055  84 SSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00161   81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 1-116 2.11e-32

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 110.08  E-value: 2.11e-32
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   1 MILILLIMSCIIFIiTIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMIL 80
Cdd:MTH00202    1 MLLILFMSILSILI-SSLLFLVSWMLSFRSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPL 79

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2770826055  81 IIKSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00202   80 VLKSSWSKGGLLGGTIFLLILIGGLIHEWKEGSLDW 115
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 4-116 1.31e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 103.01  E-value: 1.31e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   4 ILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIK 83
Cdd:MTH00012    3 LMMIPMMISLILPPLVLGAAWVLAARSTADREKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILM 82

                          90       100       110
                  ....*....|....*....|....*....|...
gi 2770826055  84 SSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00012   83 TSTSKTVVYTSILFLLILVIGLIHEWREGSLDW 115
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 6-117 8.76e-29

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 100.78  E-value: 8.76e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   6 LIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSS 85
Cdd:MTH00106    3 LMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQTN 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2770826055  86 NLLNWSITSLFFIFILLIGLYHEWNQGALEWN 117
Cdd:MTH00106   83 NLNTMLTMALLLISLLALSLAYEWTQKGLEWT 114
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 5-116 7.26e-28

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 98.52  E-value: 7.26e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   5 LLIMSCIIFIITIVVMMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKS 84
Cdd:MTH00042    4 LIFFLLIILILTSLLLLAGHFLPSRSP-DLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATLI 82

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2770826055  85 SNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00042   83 TNPSTLLPISLIFLIILTIGLVYEWVNGGLEW 114
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 8-116 1.82e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 92.29  E-value: 1.82e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   8 MSCIIFIITI-----VVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:MTH00136    1 MNLITTILTItialsLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00136   81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEW 114
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
20-115 2.64e-25

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 90.95  E-value: 2.64e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055  20 MMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSSNLLNWsITSLFFIF 99
Cdd:pfam00507   1 LLLSRLLGPKRP-NPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFRELGWFGF-VEMLIFIA 78

                          90
                  ....*....|....*.
gi 2770826055 100 ILLIGLYHEWNQGALE 115
Cdd:pfam00507  79 ILLVGLVYAWKKGALE 94
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-116 2.93e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 91.48  E-value: 2.93e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   1 MILILLIMscIIFIITIVVMMLATFLSKkTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMIL 80
Cdd:MTH00113    1 MNLISMLT--ISLALSTILTTLNFWLTQ-TKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPW 77

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2770826055  81 IIKSSNLLNWSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00113   78 AINLTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 1-116 1.04e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 90.44  E-value: 1.04e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   1 MILILLIMSCIIFIITIVVmmlaTFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPM-- 78
Cdd:MTH00069    1 LIMLMLLISTILSLILITI----SFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTpw 76

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 2770826055  79 -ILIIKSSNLLNWSITslffIFILL-IGLYHEWNQGALEW 116
Cdd:MTH00069   77 aSQLNTPTNTLFWSTL----ILILLtLGLIYEWIQGGLEW 112
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-116 1.21e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 89.96  E-value: 1.21e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   1 MILILLIMSCIIFIITIVVMMlaTFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMIL 80
Cdd:MTH00203    1 MNLIMLFFLIALLLSLILLFI--AFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPW 78

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 2770826055  81 IIKSSNLLNWSITslFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00203   79 SNQLSSLSLLLAF--LFLILLTLGLIYEWLQGGLEW 112
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 3-116 4.52e-22

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 83.63  E-value: 4.52e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:COG0838     6 LPILIFLLVALGLALAMLLLSRLLGPKRP-NPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVF 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWsITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:COG0838    85 RELGWFGL-IEMLVFIAILLVGLIYAWKKGALEW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 2-116 5.66e-22

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 83.37  E-value: 5.66e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   2 ILILLIMSCIIfiitIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILI 81
Cdd:PRK06602   11 FLIFLIVAIGL----GILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVS 86

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2770826055  82 IKSSNLLNWsITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:PRK06602   87 FREIGWLGF-VEAMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 2-116 1.75e-19

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 77.02  E-value: 1.75e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   2 ILILLIMSciiFIITIVVMMLATFLSKKtIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILI 81
Cdd:MTH00018    3 LFILLIFS---VVLSALFSGASYFLGVK-QPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVL 78

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2770826055  82 IKSSNLLNWSITSLFFiFILLIGLYHEWNQGALEW 116
Cdd:MTH00018   79 YNQIAPFGFWTMVGFL-FILTLGLIYEWIKGGLEW 112
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 3-116 8.82e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 72.82  E-value: 8.82e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKTIiDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:MTH00055    6 LGIFILLLFSIGLSTVISGASYIVGVKQP-DSEKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVY 84

                          90       100       110
                  ....*....|....*....|....*....|....
gi 2770826055  83 KSSNLLNWSITSLFFIfILLIGLYHEWNQGALEW 116
Cdd:MTH00055   85 NQIGLFGFWVMYLFLI-ILTIGLIYEWVKGGLEW 117
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 6-117 2.19e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 69.19  E-value: 2.19e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   6 LIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSS 85
Cdd:MTH00030   13 LLGVGIILLLVSISFTLGNSRIGLTKPDSEKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQL 92

                          90       100       110
                  ....*....|....*....|....*....|..
gi 2770826055  86 NLLNWSITSLFFIfILLIGLYHEWNQGALEWN 117
Cdd:MTH00030   93 NLFSFWIVYTFLI-VLAIGLAYEWIKGGLEWD 123
ndhC CHL00022
NADH dehydrogenase subunit 3
 11-116 1.09e-11

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 56.92  E-value: 1.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055  11 IIFIITIVVMMLATFLSK---KTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSSNL 87
Cdd:CHL00022   12 AFLIISSLIPILAFLISGllaPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDVLGV 91

                          90       100
                  ....*....|....*....|....*....
gi 2770826055  88 LNwSITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:CHL00022   92 SA-FIEALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
2-118 2.74e-10

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 53.52  E-value: 2.74e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   2 ILILLIMSCIIFIITIvvmMLATFLSKKTI-IDRE--KSSPFECGFDPMNYSRlPFSLRFFLIAIIFLIFDVEIALILPM 78
Cdd:PRK08489   13 VFVLLVLTFVAFFLTT---RLARFISRKLAqKNTEklKLAIYECGPEPVKQPN-RISSHFYIMALLFILFDVEIVFMFPW 88

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 2770826055  79 ILIIKssnLLNW--SITSLFFIFILLIGLYHEWNQGALEWNN 118
Cdd:PRK08489   89 AVDFK---LLGLfgLIEMLLFIVLLTIGFIYAWKKGALEWQS 127
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
3-117 5.14e-10

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 52.82  E-value: 5.14e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   3 LILLIMSCIIFIITIVVMMLATFLSKKtIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILII 82
Cdd:PRK07756   10 MIVLIFLLLGILLPVVALTLGRMLRPN-KPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAY 88

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2770826055  83 KSSNLLNWsITSLFFIFILLIGLYHEWNQGALEWN 117
Cdd:PRK07756   89 DKLGLFAL-IEMLIFVVMLLVGLAYAWKKKVLQWL 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 2-117 2.10e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 43.12  E-value: 2.10e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   2 ILILLIMSCIIFIITIVVMMLATflskKTIIDREKSSPFECGFDPMNYSRLP--FSLRFFLIAIIFLIFDVEIALILPMI 79
Cdd:PRK07928    7 ILVLGALAAAFAVVSVVVASLVG----PKRYNRAKLEAYECGIEPTPQPAGGgrFPVKYYLTAMLFIVFDIEIVFLYPWA 82

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 2770826055  80 LIIKSSNLLNWsITSLFFIFILLIGLYHEWNQGALEWN 117
Cdd:PRK07928   83 VSFDALGVFGL-VEMALFMLTVFVAYAYVWRRGGLEWD 119
ND3 MTH00060
NADH dehydrogenase subunit 3; Provisional
 11-116 2.83e-05

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177132  Cd Length: 116  Bit Score: 40.27  E-value: 2.83e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055  11 IIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIkssNLLNW 90
Cdd:MTH00060   12 FLLFLVIYFFHSGLWNNKIYSGGFSWVSSFECGFFSSGLSENCFSFTYFFLLVFFVIFDLEISLLLNMPFQG---LLFYN 88

                          90       100
                  ....*....|....*....|....*.
gi 2770826055  91 SITSLFFIFILLIGLYHEWNQGALEW 116
Cdd:MTH00060   89 FWYYYFFLLLLFLGFVVELFSGYVRW 114
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 4-118 6.65e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 36.41  E-value: 6.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055   4 ILLIMSCIIFIITIVVMMLATFLSKKTIIDREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIalilpMILIIK 83
Cdd:MTH00092    2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEI-----VMFLGL 76

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 2770826055  84 SSNLLNWSITSLFFIFILLIGLYHEWNQGALEWNN 118
Cdd:MTH00092   77 LVSDFSSLISFFMLMIFIFFGFYMEWWYGKLIWVI 111
PRK06432 PRK06432
NADH dehydrogenase subunit A; Validated
 33-116 1.15e-03

NADH dehydrogenase subunit A; Validated


Pssm-ID: 102372  Cd Length: 144  Bit Score: 36.33  E-value: 1.15e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2770826055  33 DREKSSPFECGFDPMNYSRLPFSLRFFLIAIIFLIFDVEIALILPMILIIKSSNLLNWsITSLFFIFILLIGLYHEWNQG 112
Cdd:PRK06432   60 DQSYLEPYESGEVAREIWGGPSINQYYIVVLLFVVFDVDMLLLFPWAFDFKRLGLIPF-IETLIFLAMPLFAVYYAFKMG 138


                  ....
gi 2770826055 113 ALEW 116
Cdd:PRK06432  139 YMRW 142
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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