|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
5-631 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1270.05 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 5 NKKYIRFMQSSFCRFSNIKTKAYDIIDHHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALG 84
Cdd:PTZ00139 1 RFAVPAFNRLTRTFFSGHLSSAYPVIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 85 NMTEDDWRWHAYDTIKGSDWLGDQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKYGKGGQAYRCAAA 164
Cdd:PTZ00139 81 NMTEDDWRWHAYDTVKGSDWLGDQDAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAA 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 165 ADRTGHAMLHTLYGQSLSYNCIFFVEYFVLDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHA 244
Cdd:PTZ00139 161 ADRTGHAMLHTLYGQSLKYDCNFFIEYFALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHT 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 245 CTGDGNAIVARSKLPLQDLEFVQFHPTGIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEI 324
Cdd:PTZ00139 241 CTGDGGAMVSRAGLPLQDLEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEI 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 325 NEQRGCGPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLTQnvnfnkq 404
Cdd:PTZ00139 321 LEGRGCGPNKDHIYLDLTHLPPETLHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQ------- 393
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 405 tNKSNEDIIVKGLYAAGEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNIPKINANTNIGEESIQRLDHIRFN 484
Cdd:PTZ00139 394 -RNGDDDKIVPGLLAAGEAACASVHGANRLGANSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHN 472
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 485 KGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAA 564
Cdd:PTZ00139 473 KGDISTAQIRKRMQRTMQKHAAVFRIGESLQEGVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSA 552
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 124802862 565 VERKESRGAHARDDFPERDDKNYLKHSLTWMTDrnIENTKYFTTYRDVITKPLDNEMEYVPPVKRVY 631
Cdd:PTZ00139 553 EARKESRGAHARDDFPERDDKNWMKHTLSYIRD--VKKGKVRLTYRPVITTPLDNEMETVPPAKRVY 617
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
10-631 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 990.13 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 10 RFMQSSFCRFSNIK--TKAYDIIDHHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMT 87
Cdd:PLN00128 25 ASLRTALSRFFSTGggRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMT 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 88 EDDWRWHAYDTIKGSDWLGDQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKYGKGGQAYRCAAAADR 167
Cdd:PLN00128 105 EDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADR 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 168 TGHAMLHTLYGQSLSYNCIFFVEYFVLDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTG 247
Cdd:PLN00128 185 TGHAMLHTLYGQAMKHNTQFFVEYFALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTG 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 248 DGNAIVARSKLPLQDLEFVQFHPTGIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQ 327
Cdd:PLN00128 265 DGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREG 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 328 RGCGPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLTqnvnfnkqTNK 407
Cdd:PLN00128 345 RGVGPEKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVT--------IKG 416
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 408 SNEDIIVKGLYAAGEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNIPKINANTNIGEESIQRLDHIRFNKGS 487
Cdd:PLN00128 417 DDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGS 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 488 IQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVER 567
Cdd:PLN00128 497 LPTSKIRLNMQRVMQNNAAVFRTQETLEEGCKLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEAR 576
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124802862 568 KESRGAHARDDFPERDDKNYLKHSLTWMtdrniENTKYFTTYRDVITKPLDNEMEYVPPVKRVY 631
Cdd:PLN00128 577 KESRGAHAREDFTKRDDENWMKHTLGYW-----EEGKVRLDYRPVHMNTLDDEVETFPPKARVY 635
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
52-631 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 847.90 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 52 LSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTIKGSDWLGDQNAIHYMCREAPDSVLELEEFGLP 131
Cdd:TIGR01816 1 LAKGGVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 132 FSRTKDGKIYQRAFGGQSLKYGKGGQAYRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEYFVLDLLMlNSNECIGVICIN 211
Cdd:TIGR01816 81 FSRTEDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLM-EDGECRGVIAYC 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 212 IADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTGIYPAGCLITEGCRGEGGIL 291
Cdd:TIGR01816 160 LETGEIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGIL 239
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 292 RNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCGPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQ 371
Cdd:TIGR01816 240 INANGERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKD 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 372 YIPVLPTVHYNMGGIPTNYKTQVLTQNvnfnkqtnkSNEDIIVKGLYAAGEAASASVHGANRLGANSLLDIVVFGKRAAL 451
Cdd:TIGR01816 320 PIPVLPTVHYNMGGIPTNYHGQVLRDG---------NGNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGL 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 452 TIMEIDKPNIPKINANTNIGEESIQRLDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDI 531
Cdd:TIGR01816 391 SAAEYAKPGSDVKPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNV 470
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 532 EITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERDDKNYLKHSLTWmtdRNIENTKYFTTYRD 611
Cdd:TIGR01816 471 KINDKSKVWNTDLVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSY---VDINTGKVLLSYKP 547
|
570 580
....*....|....*....|
gi 124802862 612 VITKPLDNemEYVPPVKRVY 631
Cdd:TIGR01816 548 VIFKPLTV--ADFEPKKRVY 565
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
35-631 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 750.31 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGLNTAVISKVYPTRSHTVAAQGGMAAALGNVdPDDSWEWHAYDTVKGSDYLADQDAVEY 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 114 MCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEYFV 193
Cdd:TIGR01812 81 MCQEAPKAILELEHWGVPFSRTPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 194 LDLLMlNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTGI 273
Cdd:TIGR01812 153 LDLIH-DDGRVRGVVAYDLKTGEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 274 YPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCG-PNADHIYLDLTHLPYETLKER 352
Cdd:TIGR01812 232 YPSGILITEGCRGEGGYLVNKNGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEER 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 353 LPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLTQNvnfnkqtnksnediIVKGLYAAGEAASASVHGAN 432
Cdd:TIGR01812 312 LPQIRELAKYFAGVDPVKEPIPVRPTAHYSMGGIPTDYTGRVICET--------------IVKGLFAAGECACVSVHGAN 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 433 RLGANSLLDIVVFGKRAALTIME-IDKPNIPKINANTNIGEESIQRLDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIG 511
Cdd:TIGR01812 378 RLGGNSLLELVVFGRIAGEAAAEyAAKTGNPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTE 457
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 512 PLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERDDKNYLKHS 591
Cdd:TIGR01812 458 ELLKKAVDEIEELRERYKNVRINDKSKVFNTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHT 537
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 124802862 592 LTWMTDrnieNTKYFTTYRDVITKPLdnemeyvPPVKRVY 631
Cdd:TIGR01812 538 LAYYDN----PGTPRLEYKPVTITKY-------EPAERKY 566
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-631 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 552.74 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALEL---SKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTIKGSDWLGDQNA 110
Cdd:PRK06069 6 YDVVIVGSGLAGLRAAVAAaerSGGKLSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 111 IHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSY-NCIFFV 189
Cdd:PRK06069 86 VEVFVREAPEEIRFLDHWGVPWSRRPDGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFdNIHFYD 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 190 EYFVLDLLMLNsNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFH 269
Cdd:PRK06069 158 EHFVTSLIVEN-GVFKGVTAIDLKRGEFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFH 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 270 PTGIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCGPNADHIY--LDLTHLPYE 347
Cdd:PRK06069 237 PTGLVPSGILITEAARGEGGYLINKEGERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGLCYvgLDLRHLGEE 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 348 TLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLTQNVNFnkqtnksnediiVKGLYAAGEAASAS 427
Cdd:PRK06069 317 KINERLPLIREIAKKYAGIDPVTEPIPVRPAAHYTMGGIHTDVYGRVLTADGEW------------VRGLWAAGEAAAVS 384
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 428 VHGANRLGANSLLDIVVFGK----RAALTIMEIDKPniPKINANTNIGEESiQRLDHIRFNKGSIQTSQLRKKMQICMQK 503
Cdd:PRK06069 385 VHGANRLGSNSTAECLVWGRiageQAAEYALKRPAP--SSPVEKLAEKEEK-RIFDKLLKKEGGEPSYEIRRELNDIMDK 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 504 HAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERD 583
Cdd:PRK06069 462 NFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIYNTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRD 541
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 124802862 584 DKNYLKHSLTWMTDRNIEntkyfTTYRDV-ITKpldnemeyVPPVKRVY 631
Cdd:PRK06069 542 DENWLKHTLAYYTGGGPK-----VTYTPVtITK--------WKPEERKY 577
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
34-631 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 542.40 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSK--NKYKVACISKLFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTIKGSDWLGDQNA 110
Cdd:PRK05945 4 HDVVIVGGGLAGCRAALEIKRldPSLDVAVVAKTHPIRSHSVAAQGGIAASLKNVdPEDSWEAHAFDTVKGSDYLADQDA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 111 IHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVE 190
Cdd:PRK05945 84 VAILTQEAPDVIIDLEHLGVLFSRLPDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDE 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 191 YFVLDLLmLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHP 270
Cdd:PRK05945 156 WYVMRLI-LEDNQAKGVVMYHIADGRLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHP 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 271 TGIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCGPNA----DHIYLDLTHLPY 346
Cdd:PRK05945 235 TGLYPVGVLISEAVRGEGAYLINSEGDRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDGsaggPFVYLDLRHMGK 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 347 ETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLtqnvnfnkqtnkSNEDIIVKGLYAAGEAASA 426
Cdd:PRK05945 315 EKIMSRVPFCWEEAHRLVGVDAVTEPMPVRPTVHYCMGGIPVNTDGRVR------------RSADGLVEGFFAAGECACV 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 427 SVHGANRLGANSLLDIVVFGKRAALTIME-IDKPNIPKINANTNIgEESIQRLDHIRFNKGSIQTSQLRKKMQICMQKHA 505
Cdd:PRK05945 383 SVHGANRLGSNSLLECVVYGRRTGAAIAEyVQGRKLPEVDEQRYL-KEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHC 461
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 506 AVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLAsQTILA-AVERKESRGAHARDDFPERDD 584
Cdd:PRK05945 462 GVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKCWNTELIEALELRSLMVVG-EIILTsALNRQESRGAHSREDYPQRDD 540
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 124802862 585 KNYLKHSLTWMTDRNIEntkyfTTYRDVItkpldneMEYVPPVKRVY 631
Cdd:PRK05945 541 QNFLKHTLAYYSPAGID-----IQYMPVV-------ITMFEPQERKY 575
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
35-631 |
1.11e-163 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 480.67 E-value: 1.11e-163
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKN--KYKVACISKLFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTIKGSDWLGDQNAIH 112
Cdd:PRK09231 6 DLAIIGAGGAGLRAAIAAAEAnpNLKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFDYHFHDTVAGGDWLCEQDVVE 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 113 YMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIF-FVEY 191
Cdd:PRK09231 84 YFVHHCPTEMTQLEQWGCPWSRKPDGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEH 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 192 FVLDLLmLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPT 271
Cdd:PRK09231 156 FVLDIL-VDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPT 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 272 GIYPAGCLITEGCRGEGGILRNKEGEAFMMRYA---------PKAK--DLASRDVVSRAMTIEinEQRG---CGPNADHI 337
Cdd:PRK09231 235 GLPGSGILMTEGCRGEGGILVNKDGYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHE--WRKGntiSTPRGDVV 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 338 YLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTnyktqvltqnvNFNKQTNksnediiVKGL 417
Cdd:PRK09231 313 YLDLRHLGEKKLHERLPFICELAKAYVGVDPVKEPIPVRPTAHYTMGGIET-----------DQNCETR-------IKGL 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 418 YAAGEAASASVHGANRLGANSLLDIVVFGKR----AALTIMEIDKPNIPKINANtniGEESIQRLDHIRFNKGSIQTSQL 493
Cdd:PRK09231 375 FAVGECSSVGLHGANRLGSNSLAELVVFGRVageqAAERAATAGPGNEAALDAQ---AADVEQRLKALVNQEGGENWAKI 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 494 RKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGA 573
Cdd:PRK09231 452 RDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKRVRITDTSSVFNTDLLYTIELGYGLDVAECMAHSALARKESRGA 531
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124802862 574 HARDD--FPERDDKNYLKHSLTWmtdRNiENTKYFTTYRDV-ITKpldnemeyVPPVKRVY 631
Cdd:PRK09231 532 HQRLDegCTERDDVNFLKHTLAF---YN-ADGTPRIEYSDVkITK--------SPPAKRVY 580
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
32-592 |
5.23e-158 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 463.81 E-value: 5.23e-158
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNkYKVACISKLFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTIKGSDWLGDQNAI 111
Cdd:COG0029 3 LKTDVLVIGSGIAGLSAALKLAER-GRVTLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 112 HYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSlkygkggqAYRCAAAADRTGHAMLHTLYGQSLSYNCIFFVE- 190
Cdd:COG0029 80 RVLVEEGPERIRELIELGVPFDRDEDGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNITVLEn 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 191 YFVLDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHP 270
Cdd:COG0029 152 HFAVDLITDADGRCVGAYVLDEKTGEVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHP 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 271 TGIYPAGC---LITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEINEQRGcgpnaDHIYLDLTHLPYE 347
Cdd:COG0029 232 TALYHPGApsfLISEAVRGEGAVLRNADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAE 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 348 TLKERLPGIMETAKIFaGVDVTKQYIPVLPTVHYNMGGIptnyktqvltqNVNFNKQTNksnediiVKGLYAAGEAASAS 427
Cdd:COG0029 306 FIRERFPTIYARCLEL-GIDITKEPIPVAPAAHYTMGGV-----------ATDLDGRTS-------IPGLYAVGEVACTG 366
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 428 VHGANRLGANSLLDIVVFGKRAALTIME-----IDKPNIPKINANTNIGEESIQRldhirfnkgsiqtSQLRKKMQICMQ 502
Cdd:COG0029 367 VHGANRLASNSLLEGLVFGRRAAEDIAArlaesPLPPEIPEWDESVTDPDEEVLI-------------AHLRDELRRLMW 433
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 503 KHAAVFRIGPLLQEGYKQILEICSIFKD----------IEITDKTLTwntdlletlelenlltlASQTILAAVERKESRG 572
Cdd:COG0029 434 DYVGIVRTAKGLERALRRLELLREEIEEyanfrvsrdlLELRNLLLV-----------------AELIVRAALARKESRG 496
|
570 580
....*....|....*....|
gi 124802862 573 AHARDDFPERDDKnYLKHSL 592
Cdd:COG0029 497 AHYRSDYPETDPA-WRRHTV 515
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
34-631 |
3.92e-149 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 443.17 E-value: 3.92e-149
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAAL-GNMT-EDDWRWHAYDTIKGSDWLGDQNAI 111
Cdd:PRK06452 6 YDAVVIGGGLAGLMSAHEIASAGFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAA 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 112 HYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEY 191
Cdd:PRK06452 86 ELLSNKSGEIVMLLERWGALFNRQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEW 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 192 FVLDLLmLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPT 271
Cdd:PRK06452 158 FSLDLV-TDNKKVVGIVAMQMKTLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPT 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 272 GIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCgPNAdHIYLDLTHLPYETLKE 351
Cdd:PRK06452 237 ALYPSDVLISEAARGEGGILKNVKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF-PGG-YVGLDLTHLGEEYIKE 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 352 RLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNyktqvltqnvnfnkqTNKSNEDIIvkGLYAAGEAASASVHGA 431
Cdd:PRK06452 315 RLALAVEAAKSFAGVDAFTEPIPVRPAQHYYMGGIDVD---------------IDGRNPDIV--GLFSAGEAACVSVHGA 377
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 432 NRLGANSLLDIVVFGKRAALTIMEIDKPNipKINANTNIGEESIQRLDH---IRFNKGSIQTSQLRKKMQICMQKHAAVF 508
Cdd:PRK06452 378 NRLGSNSLLDTLVFGQVTGRTVVQFLKSN--PGNPTSNYEKEAEKVVDDaykFVKSESGVHFGQILEKLRDTMWDYVGIY 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 509 RIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERDDKNYL 588
Cdd:PRK06452 456 RDEGGLLNAMSEINKLRGMISNMYVTDKSKVYNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWL 535
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 124802862 589 KHSLTWMTDRNIEntkyfTTYRDVitkpldnEMEYVPPVKRVY 631
Cdd:PRK06452 536 KHTIAYLRGNTVE-----VTFKPV-------KITRWKPEPRVY 566
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
31-453 |
2.33e-143 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 423.48 E-value: 2.33e-143
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 31 DHHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMT----EDDWRWHAYDTIKGSDWLG 106
Cdd:COG1053 1 DHEYDVVVVGSGGAGLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 107 DQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQraFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCI 186
Cdd:COG1053 81 DQDLVEALAEEAPEAIDWLEAQGVPFSRTPDGRLPQ--FGGHSVG--------RTCYAGDGTGHALLATLYQAALRLGVE 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 187 FFVEYFVLDLLMlNSNECIGVICINiADGKIHRFFTPHTVIATGGYGRAY------------LSCTSAHACTGDGNAIVA 254
Cdd:COG1053 151 IFTETEVLDLIV-DDGRVVGVVARD-RTGEIVRIRAKAVVLATGGFGRNYemraeylpeaegALSTNAPGNTGDGIAMAL 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 255 RSKLPLQDLEFVQFHPTGIYPAGCLITEGCRG-EGGILRNKEGEAFMMRYAPkakdlasRDVVSRAMTIEINEqrgcgpn 333
Cdd:COG1053 229 RAGAALADMEFVQFHPTGLPGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDE------- 294
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 334 ADHIYLDLTHLPY-------------ETLKErLPGIM--------ETAKIF-----AGVDVTKQY-----------IPVL 376
Cdd:COG1053 295 PAYLVLDLRHRRRleeyleagylvkaDTIEE-LAAKLgidaaelaATVARYnaaakAGVDPRGTClgpikegpfyaIPVR 373
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 124802862 377 PTVHYNMGGIPTNYKTQVLTQNvnfnkqtnksneDIIVKGLYAAGEAAsASVHGANRLGANSLLDIVVFGKRAALTI 453
Cdd:COG1053 374 PGVHYTMGGLRVDADARVLDAD------------GTPIPGLYAAGEAA-GSVHGANRLGGNSLGDALVFGRIAGRHA 437
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
35-439 |
8.84e-138 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 407.83 E-value: 8.84e-138
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAAL-GNMT-EDDWRWHAYDTIKGSDWLGDQNAIH 112
Cdd:pfam00890 1 DVLVIGGGLAGLAAALAAAEAGLKVAVVEKGQPFGGATAWSSGGIDALGnPPQGgIDSPELHPTDTLKGLDELADHPYVE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 113 YMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqAYRCAAAADR-----TGHAMLHTLYGQSLSYNCIF 187
Cdd:pfam00890 81 AFVEAAPEAVDWLEALGVPFSRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDF 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 188 FVEYFVLDLLMLNsNECIGVICINIADGKIHRFFTPH-TVIATGGYGR---------AYLSCTSAHACTGDGNAIVARSK 257
Cdd:pfam00890 155 QPRTAADDLIVED-GRVTGAVVENRRNGREVRIRAIAaVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAG 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 258 LPLQD--LEFVQFHPTGIYP----AGCLItEGCRGEGGILRNKEGEAFMMryapkakDLASRDVVSRAMT-IEINEQRGc 330
Cdd:pfam00890 234 AALTDdlMEFVQFHPTSLVGirlgSGLLI-EALRGEGGILVNKDGRRFMN-------ELASRDVVSRAITrNEIDEGRG- 304
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 331 gpnaDHIYLDLTH-LPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYKTQVLtqnvnfnkqtnkSN 409
Cdd:pfam00890 305 ----ANVYLDASGsLDAEGLEATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGRVL------------DA 368
|
410 420 430
....*....|....*....|....*....|
gi 124802862 410 EDIIVKGLYAAGEAASASVHGANRLGANSL 439
Cdd:pfam00890 369 DGQPIPGLYAAGEVACGGVHGANRLGGNSL 398
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
32-631 |
3.26e-135 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 410.14 E-value: 3.26e-135
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGN--MTE-DDWRWHAYDTIKGSDWLGDQ 108
Cdd:PRK08626 4 IYTDALVIGAGLAGLRVAIAAAQRGLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 109 NAIHYMCREAPDSVLELEEFGLPFSRTKDGK---------------------IYQRAFGGQslkygkggQAYRCAAAADR 167
Cdd:PRK08626 84 EVARMFVHTAPKAVRELAAWGVPWTRVTAGPrtvvingekvtitekeeahglINARDFGGT--------KKWRTCYTADG 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 168 TGHAMLHTLYGQSLSYNciffVEyfVLD-----LLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSA 242
Cdd:PRK08626 156 TGHTMLYAVDNEAIKLG----VP--VHDrkeaiALIHDGKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNA 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 243 HACTGDGNAI-----VArsklPLQDLEFVQFHPTGIYPAGCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVS 317
Cdd:PRK08626 230 VICEGIGAAIaletgVA----PLGNMEAVQFHPTAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVS 305
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 318 RAMTIEINEQRGC-GPNADHIYLDLTHLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIptnyktqvlt 396
Cdd:PRK08626 306 RRMTEHIRKGKGVkSPYGPHLWLDIRILGRKHIETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGI---------- 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 397 qnvnfnkQTNKSNEDIIVKGLYAAGEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNipKINANTNIGEESI- 475
Cdd:PRK08626 376 -------RTNPTGESYGLKGLFSAGEAACWDMHGFNRLGGNSLAETVVAGMIVGKYVADFCLGN--ELEIDTALVEKFVk 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 476 ---QRLDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELEN 552
Cdd:PRK08626 447 kqqDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELEKAVKELQELLERSKNIGLKSKKRGANPELEEALRVPR 526
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 553 LLTLASQTILAAVERKESRGAHARDDFPERDDKNYLKHSLTWMTDRNientkyfTTYRDVITKPLD-NEMEyVPPVKRVY 631
Cdd:PRK08626 527 MLKLALCVAYGALARTESRGAHAREDYPKRNDRDWLNRTLASWPEGE-------ALEPTLEYEPLDvMKME-LPPGFRGY 598
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
35-585 |
6.32e-127 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 385.10 E-value: 6.32e-127
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKyKVACISK-LFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:PRK06263 9 DVLIIGSGGAGARAAIEAERGK-NVVIVSKgLFGKSGCTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEI 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 114 MCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEYFV 193
Cdd:PRK06263 86 LVKEAPKRLKDLEKFGALFDRTEDGEIAQRPFGGQSFN--------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 194 LDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTG- 272
Cdd:PRK06263 158 IKLIVDENREVIGAIFLDLRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGm 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 273 IYPA---GCLITEGCRGEGGILRNKEGEAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCGPNAdhIYLDLTHLPYETL 349
Cdd:PRK06263 238 VYPYsgrGILVTEAVRGEGGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGTNHGG--VYLDVTHLPDEVI 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 350 KERLPGIMETAKIFaGVDVTKQYIPVLPTVHYNMGGIPtnyktqvltqnVNFNKQTNksnediiVKGLYAAGEAASAsVH 429
Cdd:PRK06263 316 EEKLETMLEQFLDV-GVDIRKEPMEVAPTAHHFMGGIR-----------INEDCETN-------IPGLFACGEVAGG-VH 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 430 GANRLGANSLLDIVVFGKRAALTIMEIDKPNipKINANTNIGEESIQRLDH-IRFNKGSIQTSQLRKKMQICMQKHAAVF 508
Cdd:PRK06263 376 GANRLGGNALADTQVFGAIAGKSAAKNAENN--EFKKVNRSVEEDIARIKSeIKFLNGSINPYDLIDELKKTMWDYVSIV 453
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 124802862 509 RIGPLLQEGYKQILEICSIFKDIEITDKTltwntDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERDDK 585
Cdd:PRK06263 454 RNEKGLKKALEEINELKEKLKDLKVNGIV-----DFNKALELENMILVAELVIKSALLRKESRGAHYREDYPETNDE 525
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
28-583 |
1.16e-115 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 358.58 E-value: 1.16e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 28 DIIDHHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTIKGSDWLG 106
Cdd:PRK07803 3 EVERHSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLN 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 107 DQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSlkygkggqaY-RCAAAADRTGHAMLHTL--------- 176
Cdd:PRK07803 83 NWRMAELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHT---------YpRLAHVGDRTGLELIRTLqqkivslqq 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 177 --YGQSLSYNCIF--FVEYFVLDLLmLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAI 252
Cdd:PRK07803 154 edHAELGDYEARIkvFAECTITELL-KDGGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHAL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 253 VARSKLPLQDLEFVQFHPTG-IYPA---GCLITEGCRGEGGILRNKEGEAFMMRYAP----------------------- 305
Cdd:PRK07803 233 ALRAGATLINMEFVQFHPTGmVWPPsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqyaeteeeadrwykdndn 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 306 --KAKDLASRDVVSRAMTIEINEQRGcgpnADH--IYLDL-THLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVH 380
Cdd:PRK07803 313 nrRPPELLPRDEVARAINSEVKAGRG----SPHggVYLDIaSRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCH 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 381 YNMGGIPTNYKTQVLTqnvnfnkqtnksnediiVKGLYAAGEAAsASVHGANRLGANSLLDIVVFGKRAALTIMEIdkpn 460
Cdd:PRK07803 389 YVMGGVEVDPDTGAAT-----------------VPGLFAAGECA-GGMHGSNRLGGNSLSDLLVFGRRAGLGAADY---- 446
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 461 IPKINANTNIGEESIQR-----LDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEItD 535
Cdd:PRK07803 447 VRGLGSRPAVSEEAVDAaareaLAPFERPAGAENPYTLHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSV-E 525
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 124802862 536 KTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDFPERD 583
Cdd:PRK07803 526 GHRQYNPGWHLALDLRNMLLVSECVARAALERTESRGGHTRDDHPGMD 573
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
34-584 |
8.90e-101 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 318.97 E-value: 8.90e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNKyKVACISKLFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:PLN02815 30 FDFLVIGSGIAGLRYALEVAEYG-TVAIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRV 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 114 MCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSlkygkggqAYRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEY-F 192
Cdd:PLN02815 107 VCTEGPERVKELIAMGASFDHGEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhF 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 193 VLDLLMLNSNE---CIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFH 269
Cdd:PLN02815 179 AIDLLTSQDGGsivCHGADVLDTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFH 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 270 PTGIYPAGC------------LITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEINEQrgcgpNADHI 337
Cdd:PLN02815 259 PTALADEGLpikpakarenafLITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKR-----NEKYV 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 338 YLDLTHLPYETLKERLPGIM-ETAKIfaGVDVTKQYIPVLPTVHYNMGGIPTnyktqvltqnvNFNKQTNksnediiVKG 416
Cdd:PLN02815 333 LLDISHKPREEILSHFPNIAaECLKR--GLDITKQPIPVVPAAHYMCGGVRT-----------GLQGETN-------VQG 392
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 417 LYAAGEAASASVHGANRLGANSLLDIVVFGKRAAltimeidKPNIPKI-NANTNIGEESIQRLDHIRFNKGSIQ------ 489
Cdd:PLN02815 393 LYAAGEVACTGLHGANRLASNSLLEALVFARRAV-------QPSIDHMaRALRDVSAAAAWARPVAPTALADSVmdeile 465
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 490 -TSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITdKTLTWNTDLLETLELENLLTLASQTILAAVERK 568
Cdd:PLN02815 466 wTAVVRKELQRIMWNYVGIVRSTERLETAERKLEELEAEWEAILFR-HGWKPTMVGLEACEMRNLFCVAKLVVSSALARK 544
|
570
....*....|....*.
gi 124802862 569 ESRGAHARDDFPERDD 584
Cdd:PLN02815 545 ESRGLHYTTDYPELVE 560
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
35-582 |
1.61e-95 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 302.68 E-value: 1.61e-95
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKnKYKVACISKLFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTIKGSDWLGDQNAIHYM 114
Cdd:PRK08071 5 DVIIIGSGIAALTVAKELCH-EYNVIIITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 115 CREAPDSVLELEEFGLPFSRTKDGKiyqrafggqsLKYGK-GGQAYR--CAAAADRTGHAMLHTLYGQSLSYncIFFVEY 191
Cdd:PRK08071 82 VEEGPKEIQELIENGMPFDGDETGP----------LHLGKeGAHRKRriLHAGGDATGKNLLEHLLQELVPH--VTVVEQ 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 192 -FVLDLLMLNsNECIGVICINiADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHP 270
Cdd:PRK08071 150 eMVIDLIIEN-GRCIGVLTKD-SEGKLKRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHP 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 271 TGIYPAG-C--LITEGCRGEGGILRNKEGEAFMMRYAPKaKDLASRDVVSRAmtieINEQRGCGpnaDHIYLDLTHLPYe 347
Cdd:PRK08071 228 TMLYANGrCvgLVSEAVRGEGAVLINEDGRRFMMGIHPL-ADLAPRDVVARA----IHEELLSG---EKVYLNISSIQN- 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 348 tLKERLPGIMETAKIfAGVDVTKQYIPVLPTVHYNMGGIptnyktqvltqNVNFNKQTNksnediiVKGLYAAGEAASAS 427
Cdd:PRK08071 299 -FEERFPTISALCEK-NGVDIETKRIPVVPGAHFLMGGV-----------KTNLDGETS-------IPGLYAIGEVACTG 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 428 VHGANRLGANSLLDIVVFGKRAALTIMEidKPnIPKINANTNIGEESIQRLDHIrfnkgsiqtsQLRKKMQICMQKHAAV 507
Cdd:PRK08071 359 VHGANRLASNSLLEGLVFGKRAAEHILT--KA-TKPRLNPFAEKEKKFIVLNHL----------PTKEEIQEKMMKYVGI 425
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802862 508 FRIGPLLQEgYKQILEICSIFKDI----EITDKTLTwntdlletleLENLLTLASQTILAAVERKESRGAHARDDFPER 582
Cdd:PRK08071 426 VRTEQSLSE-AKRWLEKYGVRNMIldhdALTNEEIE----------LSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR 493
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
37-631 |
1.47e-90 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 292.26 E-value: 1.47e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 37 VIVGAGGAGLRSALELSKNKYKVACISkLFPT-RSHTVAAQGGINAALGNMTEDDWRW-HAYDTIKGSDWLGDQNAIHYM 114
Cdd:PRK08641 7 IVVGGGLAGLMATIKAAEAGVHVDLFS-LVPVkRSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAM 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 115 CREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQslkygkggQAYRCAAAADRTGHAMLHTLYGQSLSYNCIFFVEYF-- 192
Cdd:PRK08641 86 CEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGGT--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYeg 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 193 --VLDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHP 270
Cdd:PRK08641 158 weFLGAVLDDEGVCRGIVAQDLFTMEIESFPADAVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHP 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 271 TGIyPAG---CLITEGCRGEGG-ILRNKEGEA--FMMRYAPKAKDLASRDVVSRAM-TIEINEQRGC-GPNAdhIYLDLT 342
Cdd:PRK08641 238 TAI-PGDdklRLMSESARGEGGrVWTYKDGKPwyFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGInGENM--VYLDLS 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 343 HLPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIptnyktqvltqNVNFNKQTNksnediiVKGLYAAGE 422
Cdd:PRK08641 315 HKDPKELDIKLGGILEIYEKFTGDDPRKVPMKIFPAVHYSMGGL-----------WVDYDQMTN-------IPGLFAAGE 376
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 423 AaSASVHGANRLGANSLLDIVVFGKRAALTIMEIdkpnIPKINANTNIGEESI---------QRLDHIRFNKGSIQTSQL 493
Cdd:PRK08641 377 C-DYSYHGANRLGANSLLSAIYGGMVAGPNAVEY----IKGLGKSADDVSSSVfeqalkqeqEKFDNILSMDGTENAYVL 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 494 RKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDkTLTW-NTDLLETLELENLLTLASQTILAAVERKESRG 572
Cdd:PRK08641 452 HKELGEWMTDNVTVVRENDKLLETDEKIQELMERYKRISVND-TSRWsNQGASFTRQLWNMLELARVITIGALNRNESRG 530
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 124802862 573 AHARDDFPERDDKNYLKHSLTWMTDRNIENTkyfTTYRDVITKpldnemeYVPPVKRVY 631
Cdd:PRK08641 531 AHYKPEFPERNDENWLKTTMATYTPEGEEPE---FSYEDVDTS-------LIPPRKRDY 579
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
32-580 |
7.27e-90 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 287.47 E-value: 7.27e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKnKYKVACISKLFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTIKGSDWLGDQNAI 111
Cdd:TIGR00551 1 MEMDVVVIGSGAAGLSAALALAE-KGRVSVITKASVTDSNSYYAQGGIAAALAE--TDSIDAHVEDTLAAGAGICDEEAV 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 112 HYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVE- 190
Cdd:TIGR00551 78 WFVVSDGSEAVQFLVSHGVTFDRNEQGGVALTREGGHSYP--------RIFHAGDATGREIIPTLEKHARSEPNVNIIEg 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 191 YFVLDLLmLNSNECIGVICINiaDGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHP 270
Cdd:TIGR00551 150 EFALDLL-IETGRCAGVFVQG--SGTLETLHADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 271 TGIYPAGC---LITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEINEQrgcgpNADHIYLDLTHLpyE 347
Cdd:TIGR00551 227 TALIKPRVryfLITEAVRGEGAKLVDRDGERFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGI--E 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 348 TLKERLPGIMETAKiFAGVDVTKQYIPVLPTVHYNMGGIptnyktqvltqNVNFNKQTNksnediiVKGLYAAGEAASAS 427
Cdd:TIGR00551 299 NFKDRFPTIYAVCR-GAGIDPEREPIPVAPGAHYTMGGI-----------SVDAFGRTT-------IPGLYAIGETACTG 359
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 428 VHGANRLGANSLLDIVVFGKRAALTIMEiDKPNIPKINANTNIGEESIQRLDhirfNKGSIQTSqlRKKMQICMQKHAAV 507
Cdd:TIGR00551 360 LHGANRLASNSLLECLVFGLRAARTISR-EPPYASREYQSGVWDEPRSENPL----DRHELQHK--MSSLRSVLWNHAGI 432
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 124802862 508 FRIGPLLQEGYKQILEICSIFKD-IEITDKTLTwntdlletlelenlltlASQTILAAVERKESRGAHARDDFP 580
Cdd:TIGR00551 433 VRLEWSLREALRKLVEIQDEVDErMELSNLKLV-----------------AKLVTISALKREESRGAHYRLDYP 489
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
33-608 |
3.17e-89 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 287.71 E-value: 3.17e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 33 HYDAVIVGAGGAGLRSALELSKNkYKVACISKLFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTIKGSDWLGDQNAIH 112
Cdd:PRK07395 9 QFDVLVVGSGAAGLYAALCLPSH-LRVGLITKDTLKTSASDWAQGGIAAAIA--PDDSPKLHYEDTLKAGAGLCDPEAVR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 113 YMCREAPDSVLELEEFGLPFSRTKDgkiyQRAFggqSLKygkggQAY---RCAAAADRTGHAMLHTLYGQSLSY-NCIFF 188
Cdd:PRK07395 86 FLVEQAPEAIASLVEMGVAFDRHGQ----HLAL---TLE-----AAHsrpRVLHAADTTGRAIVTTLTEQVLQRpNIEII 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 189 VEYFVLDL-LMLNSNECIGVICinIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQ 267
Cdd:PRK07395 154 SQALALSLwLEPETGRCQGISL--LYQGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQ 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 268 FHPTGIYPAGC---LITEGCRGEGGILRNKEGEAFMMRYAPkAKDLASRDVVSRAMTIEINEQrGCGPNADHIYLDLTHL 344
Cdd:PRK07395 232 FHPTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQKT-ATDPATAHVWLDLRPI 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 345 PYETLKERLPGIMETAKIFaGVDVTKQYIPVLPTVHYNMGGIPTnyktqvltqnvNFNKQTNksnediiVKGLYAAGEAA 424
Cdd:PRK07395 310 PAERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVT-----------DLNNQTS-------IPGLYAVGETA 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 425 SASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNIPKINANTNIGEESiqrldhiRFNKGSIQTSQLRKKMQICMQKH 504
Cdd:PRK07395 371 STGVHGANRLASNSLLECLVFAAQLAQLELPIEPPASPDLPPISFIIDAS-------QWKNEQEQIQRIRQELPELVWQS 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 505 AAVFRIGPLLQEGYKQI---------LEICSIFKDIEiTDKTLTWNTDLLETLELENLLTL----ASQTIL-AAVERKES 570
Cdd:PRK07395 444 AGICREADTLERAIAQVeqwqqqlaaLPLSQFLANLP-PGQTVSFNGPDAEQQLRLWAETRnlldIAYLILkSALFRTES 522
|
570 580 590
....*....|....*....|....*....|....*...
gi 124802862 571 RGAHARDDFPErDDKNYLKHSLtwmtdrnIENTKYFTT 608
Cdd:PRK07395 523 RGGHYRLDYPQ-TDPAWQVHTL-------VQGERWWQS 552
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
37-631 |
7.23e-88 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 285.59 E-value: 7.23e-88
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 37 VIVGAGGAGLRSALELSKNKYKVacisKLF-----PTRSHTVAAQGGINAALGNMTEDDWRW-HAYDTIKGSDWLGDQNA 110
Cdd:TIGR01811 2 IVVGTGLAGGMAAAKLAELGYHV----KLFsyvdaPRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESP 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 111 IHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQslkygkggQAYRCAAAADRTGHAMLHTLYGQSLSYNCIFFVE 190
Cdd:TIGR01811 78 VKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRSFGGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVE 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 191 YF----VLDLLMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFV 266
Cdd:TIGR01811 150 KYegweMLDIIVVDGNRARGIIARNLVTGEIETHSADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFI 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 267 QFHPTGIYPAGC------LITEGCRGEGGILRNKEGEA--------------FMMRYAPKAKDLASRDVVSRAMTIEINE 326
Cdd:TIGR01811 230 QIHPTAIPVDGTwqsklrLMSESLRNDGRIWTPKEKNDnrdpntipedkrdyFLERRYPAFGNLVPRDIASRAIFQVCDA 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 327 QRGCGPNADHIYLDLTH----LPYETLKERLPGIMETAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNYktqvltqnvnfN 402
Cdd:TIGR01811 310 GKGVGPGENAVYLDFSDaderLGRKEIDAKYGNLFEMYEKFTGDDPYKVPMRIFPAVHYTMGGLWVDY-----------D 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 403 KQTNksnediiVKGLYAAGEaASASVHGANRLGANSLLDIVVFGKRAA-LTIMEIDKPNI--PKINANTNIGEESI---- 475
Cdd:TIGR01811 379 QMTN-------IPGLFAAGE-CDFSQHGANRLGANSLLSAIADGYFALpFTIPNYLGPELssEDMPEDAPEFQAALaeeq 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 476 QRLDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIF-KDIEITDKTLTWNTDLLETLELENLL 554
Cdd:TIGR01811 451 ERFDRLLKMRGDENPYYLHRELGEIMTENCGVSRNNEKLLKTDEKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYL 530
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 555 TLASQTILAAVERKESRGAHARDDFP------ERDDKNYLKhslTWMTDRNIENTKYFTTYRDVitkpldnEMEYVPPVK 628
Cdd:TIGR01811 531 ELAELMCLDALNRNESCGAHFRPEFPtpdgeaERNDEEFLK---VTAWEFQGENDAPEFHYEEL-------DFELVPPRK 600
|
...
gi 124802862 629 RVY 631
Cdd:TIGR01811 601 RDY 603
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
35-583 |
1.15e-85 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 277.18 E-value: 1.15e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKykVACISKL-FPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:PRK07512 11 RPVIVGGGLAGLMAALKLAPRP--VVVLSPApLGEGASSAWAQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAAL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 114 MCREAPDSVLELEEFGLPFSRTKDGKIyqrAFGgqslkygkggqayRCAA---------AADRTGHAMLHTLYGQSLSYN 184
Cdd:PRK07512 87 ITAEAPAAIEDLLRLGVPFDRDADGRL---ALG-------------LEAAhsrrrivhvGGDGAGAAIMRALIAAVRATP 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 185 CIFFVEYFVLDLLMLNSNECIGVICINiaDGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLE 264
Cdd:PRK07512 151 SITVLEGAEARRLLVDDGAVAGVLAAT--AGGPVVLPARAVVLATGGIGGLYAVTTNPAGAFGQGLALAARAGAVIADPE 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 265 FVQFHPTGI----YPAGcLITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEIneQRGCGPnadhiYLD 340
Cdd:PRK07512 229 FVQFHPTAIdigrDPAP-LATEALRGEGAILINEDGERFMADIHPGA-ELAPRDVVARAVFAEI--AAGRGA-----FLD 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 341 LTHLPYETLKERLPGIMEtAKIFAGVDVTKQYIPVLPTVHYNMGGIPTNyktqvltqnvnfnkQTNKSNediiVKGLYAA 420
Cdd:PRK07512 300 ARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGIAVD--------------ADGRSS----LPGLWAA 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 421 GEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNIPKINAntnigeESIQRLDhirfnkgSIQTSQLRKkmqiC 500
Cdd:PRK07512 361 GEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAAAAPLSA------AAAPALD-------PADLALLRP----I 423
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 501 MQKHAAVFRIGPLLQEGYKQILEICSifKDIEITDKTLTwntdlletlelenlltlASQTILAAVERKESRGAHARDDFP 580
Cdd:PRK07512 424 MSRHVGVLRDADGLRRAIAALLPLEA--GAGPAADPATV-----------------ALLIAVAALAREESRGAHFRTDFP 484
|
...
gi 124802862 581 ERD 583
Cdd:PRK07512 485 LTA 487
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
31-585 |
8.13e-83 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 270.25 E-value: 8.13e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 31 DHHYDAVIVGAGGAGLRSALELSkNKYKVACISKLFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTIKGSDWLGDQNA 110
Cdd:PRK09077 6 EHQCDVLIIGSGAAGLSLALRLA-EHRRVAVLSKGPLSEGSTFYAQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 111 IHYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAF----GGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSY-NC 185
Cdd:PRK09077 83 VRFIAENAREAVQWLIDQGVPFTTDEQANGEEGYHltreGGHSHR--------RILHAADATGKAVQTTLVERARNHpNI 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 186 IFFVEYFVLDL-----LMLNSNECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPL 260
Cdd:PRK09077 155 TVLERHNAIDLitsdkLGLPGRRVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRV 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 261 QDLEFVQFHPTGIYPAGC---LITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEInEQRGcgpnADHI 337
Cdd:PRK09077 235 ANMEFNQFHPTCLYHPQArsfLITEALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEM-KRLG----ADCV 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 338 YLDLTHLPYETLKERLPGIMETAKIFaGVDVTKQYIPVLPTVHYNMGGIPTnyktqvltqnvNFNKQTNksnediiVKGL 417
Cdd:PRK09077 309 YLDISHKPADFIRQHFPTIYERCLEL-GIDITKEPIPVVPAAHYTCGGVMV-----------DLHGRTD-------LDGL 369
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 418 YAAGEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDK-----PNIPKINAN--TNIGEESI--QRLDHIRFNK--- 485
Cdd:PRK09077 370 YAIGEVSYTGLHGANRMASNSLLECLVYGRSAAEDILSRLPkapmpPTLPAWDESrvTDSDEEVViqHNWHELRLFMwdy 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 486 -GSIQTSqlrKKMQicmqkhAAVFRIGPLLQEgykqILEICSIFK---D-IEITDKTLTwntdlletlelenlltlASQT 560
Cdd:PRK09077 450 vGIVRTT---KRLE------RALHRIRLLQQE----IDEYYANFRvsnNlLELRNLVQV-----------------AELI 499
|
570 580
....*....|....*....|....*
gi 124802862 561 ILAAVERKESRGAHARDDFPERDDK 585
Cdd:PRK09077 500 VRCAMERKESRGLHYTLDYPELLPE 524
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
34-478 |
2.16e-78 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 255.38 E-value: 2.16e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNkYKVACISKLFPTRSHTVAAQGGINAALGnmtEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:PRK06175 5 ADVLIVGSGVAGLYSALNLRKD-LKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 114 MCREAPDSVLELEEFGLPFSRTKDGKIYQRAfGGQSLKygkggqayRCAAAADRTGHAMLHTLYGQSLSYNCIFFVE-YF 192
Cdd:PRK06175 81 LANESIENINKLIDMGLNFDKDEKELSYTKE-GAHSVN--------RIVHFKDNTGKKVEKILLKKVKKRKNITIIEnCY 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 193 VLDLLMlNSNECIGVICINiaDGKIHRFFTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTG 272
Cdd:PRK06175 152 LVDIIE-NDNTCIGAICLK--DNKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 273 IYPAGC-----LITEGCRGEGGILRNKEGEAFMmryapkaKDLASRDVVSRAMTIEINEQrgcgpNADHIYLDLTHLPYE 347
Cdd:PRK06175 229 FYEETIegkkfLISESVRGEGGKLLNSKGERFV-------DELLPRDVVTKAILEEMKKT-----GSNYVYLDITFLDKD 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 348 TLKERLPGIMETAKIfAGVDVTKQYIPVLPTVHYNMGGIptnyktqvltqNVNFNKQTNKSNediivkgLYAAGEAASAS 427
Cdd:PRK06175 297 FLKNRFPTIYEECLK-RGIDITKDAIPVSPAQHYFMGGI-----------KVDLNSKTSMKN-------LYAFGEVSCTG 357
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 124802862 428 VHGANRLGANSLLDIVVFGKRAALTI-MEIDkpNIPKINANTNIGEESIQRL 478
Cdd:PRK06175 358 VHGANRLASNSLLEGLVFSKRGAEKInSEID--NIKLNITKVYTLKHDVEYY 407
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
32-584 |
7.40e-74 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 246.81 E-value: 7.40e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTIKGSDWLGDQNAI 111
Cdd:PRK07804 15 DAADVVVVGSGVAGLTAALAARRAGRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAV 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 112 HYMCREAPDSVLELEEFGLPFSRTKDGKIYQRAFGGQSlkygkggqAYRCA-AAADRTGHAMLHTLyGQSLSYNCIFFVE 190
Cdd:PRK07804 93 RSLVAEGPRAVRELVALGARFDESPDGRWALTREGGHS--------RRRIVhAGGDATGAEVQRAL-DAAVRADPLDIRE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 191 Y-FVLDLLMLNSNECIGVICINIADGK------IHrffTPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDL 263
Cdd:PRK07804 164 HaLALDLLTDGTGAVAGVTLHVLGEGSpdgvgaVH---APAVVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDL 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 264 EFVQFHPTGIY----PAGC--LITEGCRGEGGILRNKEGEAFMMRYAPKAkDLASRDVVSRAMTIEINEQrgcgpNADHI 337
Cdd:PRK07804 241 EFVQFHPTVLFlgpaAGGQrpLISEAVRGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKAT-----GDDHV 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 338 YLDLTHLpyETLKERLPGIMETAKIfAGVDVTKQYIPVLPTVHYNMGGIPTnyktqvltqnvNFNKQTNksnediiVKGL 417
Cdd:PRK07804 315 YLDARGI--EGFARRFPTITASCRA-AGIDPVRQPIPVAPAAHYSCGGVVT-----------DVYGRTS-------VPGL 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 418 YAAGEAASASVHGANRLGANSLLDIVVFGKRAALTIMEIDKPNIPKinantnigeesiqRLDHIRFNKGSIQTSQLRKKM 497
Cdd:PRK07804 374 YAAGEVACTGVHGANRLASNSLLEGLVVGERAGAAAAAHAAAAGRP-------------RATPAVGPEPGLLPALDRAEL 440
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 498 QICMQKHAAVFRIGPLLQEGYKQiLEICSIFK------DIEITDKTLTwntdlletlelenlltlASQTILAAVERKESR 571
Cdd:PRK07804 441 QRAMTRGAGVLRSAAGLARAADR-LAAGAPARvvpgraDWEDTNLTLV-----------------ARALVAAALARTESR 502
|
570
....*....|...
gi 124802862 572 GAHARDDFPERDD 584
Cdd:PRK07804 503 GCHWREDFPDTDD 515
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
38-580 |
2.10e-55 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 195.02 E-value: 2.10e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 38 IVGAGGAGLRSALELSKNKYKVACISKLfPTRSHTVAAQGGInaALGNMTEDDWRWHAYDTIKGSDWLGDQNAIHYMCRE 117
Cdd:PRK08401 6 IVGGGLAGLTAAISLAKKGFDVTIIGPG-IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISK 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 118 APDSVLELEEFGLPF--SRTKDGKIYQRAFggqSLKygkggqayrcaaaaDRTGHAMLHTLY--GQSLSYNcifFVEYFV 193
Cdd:PRK08401 83 SSEAYDFLTSLGLEFegNELEGGHSFPRVF---TIK--------------NETGKHIIKILYkhARELGVN---FIRGFA 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 194 lDLLMLNSNECIGVIciniADGKIHRFftPHTVIATGGYGRAYLSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTG- 272
Cdd:PRK08401 143 -EELAIKNGKAYGVF----LDGELLKF--DATVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGf 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 273 IYPAGC-LITEGCRGEGGILRNKEGEAFMmryapkaKDLASRDVVSRAMTIEINEQRGcgpnadhIYLDLTHLpyETLKE 351
Cdd:PRK08401 216 IGKRGTyLISEAVRGAGAKLVTGDGERFV-------NELETRDIVARAIYRKMQEGKG-------VFLDATGI--EDFKR 279
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 352 RLPGIMETAKIfAGVDVTKQYIPVLPTVHYNMGGIPTN--YKTQVltqnvnfnkqtnksnediivKGLYAAGEAASASVH 429
Cdd:PRK08401 280 RFPQIYAFLRK-EGIDPSRDLIPVTPIAHYTIGGISVDtfYRTGI--------------------KNLYAIGEAASNGFH 338
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 430 GANRLGANSLLDIVVFGKRAALTIMEiDKPNIPKINANTNIGEESiqrldhirfnkGSIQtsQLRKkmqiCMQKHAAVFR 509
Cdd:PRK08401 339 GANRLASNSLLECIVSGLEVARTISR-ERPKLREVKEPPYHGYEL-----------GDVD--SIRE----ILWNHAGIVR 400
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 124802862 510 IGPLLQEGYKQIleicsifKDIEItDKTLtwntdlletlelenlLTLASQTILAAVERKESRGAHARDDFP 580
Cdd:PRK08401 401 SEESLREGLKKL-------EGIEA-DPRL---------------KLLAKGVLECALAREESRGAHYREDFP 448
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
34-587 |
1.40e-41 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 159.98 E-value: 1.40e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNKYKVACISklF---PTRSHTVAAQGGINAALGNMTEDD--WRwHAYDTIKGSDwlgdq 108
Cdd:PRK07573 36 FDVIVVGTGLAGASAAATLGELGYNVKVFC--YqdsPRRAHSIAAQGGINAAKNYQNDGDsvYR-LFYDTVKGGD----- 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 109 naihYMCREApdSVLELEEF-----------GLPFSRTKDGKIYQRAFGGQSLK---YGKG--GQ-----AYrcaAAADR 167
Cdd:PRK07573 108 ----FRAREA--NVYRLAEVsvniidqcvaqGVPFAREYGGLLANRSFGGAQVSrtfYARGqtGQqlllgAY---QALSR 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 168 ---TGHAMLHTlygqslsynciffvEYFVLDLLMLNSnECIGVICINIADGKIHRFFTPHTVIATGGYGRAYLSCTSAHA 244
Cdd:PRK07573 179 qiaAGTVKMYT--------------RTEMLDLVVVDG-RARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMG 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 245 CtgdgNAIVA-----RSKL---PLqdleFVQFHPTGIYPAG------CLITEGCRGEGGILRNK--------------EG 296
Cdd:PRK07573 244 S----NATAIwrahkKGAYfanPC----FTQIHPTCIPVSGdyqsklTLMSESLRNDGRIWVPKkkgdkrkpndipeeER 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 297 EAFMMRYAPKAKDLASRDVVSRAMTIEINEQRGCGPNADHIYLDLT----HLPYETLKERLPGIMETAKIFAGVDVTKQY 372
Cdd:PRK07573 316 DYYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLGVYLDFAdaikRLGKDVIRERYGNLFDMYERITGENPYETP 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 373 IPVLPTVHYNMGGIPTNYktqvltqnvnfNKQTNksnediiVKGLYAAGEaASASVHGANRLGANSLLDIVVFGK-RAAL 451
Cdd:PRK07573 396 MRIYPAVHYTMGGLWVDY-----------NLMST-------IPGLFVIGE-ANFSDHGANRLGASALMQGLADGYfVLPY 456
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 452 TIM-----EIDKPNIPKINANTNIGEESIQ-RLDHIRFNKGSIQTSQLRKKMQICMQKHAAVFRIGPLLQEGYKQILEIC 525
Cdd:PRK07573 457 TIGnyladTIGTPKVSTDHPEFKEAEAEVQdRIDRLLNIKGKRTVDSFHRELGKIMWDYCGMARNEEGLKKALEKIRALR 536
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802862 526 SIF-KDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGAHARDDF--PE----RDDKNY 587
Cdd:PRK07573 537 EEFwKNVRVPGSADELNQELEKAGRVADFLELGELMCRDALHREESCGGHFREEHqtEDgealRDDENF 605
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
494-631 |
7.10e-41 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 144.89 E-value: 7.10e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 494 RKKMQICMQKHAAVFRIGPLLQEGYKQILEICSIFKDIEITDKTLTWNTDLLETLELENLLTLASQTILAAVERKESRGA 573
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 124802862 574 HARDDFPERDDKNYLKHSLTWMTDRNIENTkyfTTYRDVITKPLdnemeyVPPVKRVY 631
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDGGPR---LEYEPVTFTTL------FPPKERSY 129
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
35-450 |
6.16e-40 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 151.73 E-value: 6.16e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKYK-VACISKLFPTRSHTVAAQGGINAALGNM-----TEDDWRWHAYDTIKGSDWLGDQ 108
Cdd:TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAAnVVLLEKMPVIGGNSAIAAGGMNAAGTDQqkalgIEDSPELFIKDTLKGGRGINDP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 109 NAIHYMCREAPDSV-LELEEFGLpfsrtKDGKIYQraFGGQSLKygkggQAYRCAAAAdRTGHAMLHTLYGQSLSYNCIF 187
Cdd:TIGR01813 81 ELVRILAEESKDAVdWLQDGVGA-----RLDDLIQ--LGGHSVP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDT 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 188 FVEYFVLDLLMLNSNECIGVIcINIADGKIHRFFTPHTVIATGGYGR------AY------LSCTSAHACTGDGNAIVAR 255
Cdd:TIGR01813 148 RLNSKVEDLIQDDQGSVVGVV-VKGKGKGIYIKAAKAVVLATGGFGSnkemiaKYdptlkhLGSTNQPGATGDGLLMAEK 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 256 SKLPLQDLEFVQFHPTG-IYPAGCLITEGCRGEGGILRNKEGEAFMmryapkaKDLASRDVVSRAmtieINEQrgCGPNA 334
Cdd:TIGR01813 227 IGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKTGERFM-------NELATRDKVSDA----ILAQ--PGKDA 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 335 DHIYLDLTHLPYETLKERLP-GIM-------ETAKIFaGVDVTK---------QYIP----------------------- 374
Cdd:TIGR01813 294 YLIFDDDVYKKAKMVDNYYRlGVAykgdsleELAKQF-GIPAAAlkqtikdynGYVAsgkdtpfgrpmdmptdlskapyy 372
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802862 375 ---VLPTVHYNMGGIPTNYKTQVLTQNVNfnkqtnksnediIVKGLYAAGEaASASVHGANRLGANSLLDIVVFGKRAA 450
Cdd:TIGR01813 373 aikVTPGVHHTMGGVKINTKAEVLDANGK------------PIPGLFAAGE-VTGGVHGANRLGGNAIADCIVFGRIAG 438
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
34-449 |
2.58e-32 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 131.11 E-value: 2.58e-32
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYD-----TIKGSDWLGDQ 108
Cdd:PRK06481 62 YDIVIVGAGGAGMSAAIEAKDAGMNPVILEKMPVAGGNTMKASSGMNASETKFQKAQGIADSNDkfyeeTLKGGGGTNDK 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 109 NAIHYMCREAPDSVLELEEFGLPFSRTKdgkiyqrAFGGQSLKygkggqayRCAAAADRT--GHAMLHTLYGQSLSYNCI 186
Cdd:PRK06481 142 ALLRYFVDNSASAIDWLDSMGIKLDNLT-------ITGGMSEK--------RTHRPHDGSavGGYLVDGLLKNVQERKIP 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 187 FFVEYFVLDLLmlNSNECIGVICINIADGKIHRFFTPHTVIATGGYG-------------RAYLScTSAHACTGDGNAIV 253
Cdd:PRK06481 207 LFVNADVTKIT--EKDGKVTGVKVKINGKETKTISSKAVVVTTGGFGankdmiakyrpdlKGYVT-TNQEGSTGDGIKMI 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 254 ARSKLPLQDLEFVQFHPTGIYPAGCLITEGCRGEGGILRNKEGEAFMmryapkaKDLASRDVVS---------------- 317
Cdd:PRK06481 284 EKLGGTTVDMDQIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFG-------NELDTRDKVSaainklpekyayvvfd 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 318 -----RAMTIEINEQRGCGPNADHI--YLDLTHLPYETLKERLPGIME------------TAKIFAGVDVTKQY-IPVLP 377
Cdd:PRK06481 357 sgvkdRVKAIAQYEEKGFVEEGKTIdeLAKKINVPAETLTKTLDTWNKavknkkdeafgrTTGMDNDLSTGPYYaIKIAP 436
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 124802862 378 TVHYNMGGIPTNYKTQVLTQnvnfnKQTNksnediiVKGLYAAGEAASAsVHGANRLGANSLLDIVVFGKRA 449
Cdd:PRK06481 437 GIHYTMGGVKINTNTEVLKK-----DGSP-------ITGLYAAGEVTGG-LHGENRIGGNSVADIIIFGRQA 495
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
37-493 |
6.46e-21 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 97.93 E-value: 6.46e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 37 VIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAaLGNMTE------DDWRWHAYDTIK-GSDWLGDQN 109
Cdd:PTZ00306 413 IVVGGGLAGCSAAIEAASCGAQVILLEKEAKLGGNSAKATSGING-WGTRAQakqdvlDGGKFFERDTHLsGKGGHCDPG 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 110 AIHYMCREAPDSVLELEEFGLPFSrtkdgKIYQraFGGQSLKygkggqayRCAAAADRT-------GHAMLHTLYGQ--- 179
Cdd:PTZ00306 492 LVKTLSVKSADAISWLSSLGVPLT-----VLSQ--LGGASRK--------RCHRAPDKKdgtpvpiGFTIMRTLEDHirt 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 180 SLSYNCIFFVEYFVLDLLMLNSNECIGVICINI----------ADGKIHRFFTPHTVIATGGYG---------RAY---- 236
Cdd:PTZ00306 557 KLSGRVTIMTETTVTSLLSESSARPDGVREIRVtgvrykqasdASGQVMDLLADAVILATGGFSndhtpnsllREYapql 636
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 237 --LSCTSAHACTGDGNAIVARSKLPLQDLEFVQFHPTGIY-------PAGCLITEGCRGEGGILRNKEGEAFMmryapka 307
Cdd:PTZ00306 637 sgFPTTNGPWATGDGVKLARKLGATLVDMDKVQLHPTGLIdpkdpsnRTKYLGPEALRGSGGVLLNKNGERFV------- 709
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 308 KDLASRDVVSRAMTIEINEQRG--------CGPNADHIYL-----------------------DLTHL---PYETLKERL 353
Cdd:PTZ00306 710 NELDLRSVVSQAIIAQGNEYPGsggskfayCVLNEAAAKLfgknslgfywkrlglfqrvddvkGLAKLigcPVENLHRTL 789
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 354 PGIMETAKIFAGVDVT-KQYIP-------------VLPTVHYNMGGIPTNYKTQVLTQNVNFNKQTNKSNediiVKGLYA 419
Cdd:PTZ00306 790 ETYERLSTKKVACPLTgKVVFPcvvgtqgpyyvafVTPSIHYTMGGCLISPSAEMQMEDNSVNIFEDRRP----ILGLFG 865
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 420 AGEAaSASVHGANRLGANSLLDIVVFGK----RAAlTIMEIDKPNIPKINANTNIGEESIQ--------RLdhIRFN-KG 486
Cdd:PTZ00306 866 AGEV-TGGVHGGNRLGGNSLLECVVFGKiagdRAA-TILQKKKYGLSKDKWTTVVVREVREggqfgtgsRV--LRFNlPG 941
|
....*..
gi 124802862 487 SIQTSQL 493
Cdd:PTZ00306 942 ALQRSGL 948
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
28-589 |
6.03e-12 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 68.41 E-value: 6.03e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 28 DIIDHHYDAVIVGAGGAGLRSALELSKN--KYKVACISKLFPTRSHTVAaQG--GINAALG-NMTEDDWrwhaYDTIKGs 102
Cdd:PRK06854 6 EVVEVDTDILIIGGGMAGCGAAFEAKEWapDLKVLIVEKANIKRSGAVA-QGlsAINAYIGeGETPEDY----VRYVRK- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 103 DWLG--DQNAIHYMCREAPDSVLELEEFGLPFSRTKDGKiYQRAfGGQSLKYGkgGQAYRC--AAAADRTGHAMLhtlyg 178
Cdd:PRK06854 80 DLMGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVRR-GRWQIMIN--GESYKPivAEAAKKALGDNV----- 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 179 qslsYNCIFFVEYfvldllMLNSNECIGVICINIADGKIHRFFTPHTVIATGG----Y---------GRAYLSCTSahac 245
Cdd:PRK06854 151 ----LNRVFITDL------LVDDNRIAGAVGFSVRENKFYVFKAKAVIVATGGaagiYrprspgegrGRMWYPPFN---- 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 246 TGDGNAIVARS--KLPLQDLEFVQFH------PTGIYPAGCliteGCRgeggiLRNKEGEAFMMRYAPKAKDLASRDVVS 317
Cdd:PRK06854 217 TGSGYAMGIRAgaEMTTFENRFIPLRfkdgygPVGAWFLLF----KAK-----AVNALGEEYEAKNAAELKKYVPYADYK 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 318 R--------AMTIEINEQRGcgPnadhIYLDLTH-LPYETLKERL--------PGImetAKIFAGVDVTKQYIPV--LPT 378
Cdd:PRK06854 288 PiptclrnyATVEENKAGRG--P----IYMDTEEaLQDKHLESELwedfldmtPGQ---ALLWAAQNIEPEEENSeiMGT 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 379 VHYNMGGIPT--------NYKTQVLTQNVNFNKQTNksnediiVKGLYAAGEAASASVH----GA---NRLGANSLLDIV 443
Cdd:PRK06854 359 EPYIVGSHSGasgywvsgPEDWVPEEYKWGYNRMTT-------VEGLFAAGDVVGGSPHkfssGSfaeGRIAAKAAVRYI 431
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 444 VFGKRAALTIME--IDKPnIPKINANTNIGEESIQRLDHIRFNKGSIQTSQLRKKMQICMQKHAA----VFRI-GPLLQE 516
Cdd:PRK06854 432 LDNKDEKPEIDDdqIEEL-KKEIYAPLERYEEFKDYSTDPDVNPNYISPEQLEERLQKIMDEYAGgistNYTTnEKLLEI 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 517 GYKQILEICSIFKDI------------EITDKTLTwntdlletlelenlltlaSQTILAAVE-RKESR--GAHARDDFPE 581
Cdd:PRK06854 511 ALELLEMLEEDSEKLaardlhelmrcwELKHRLLV------------------AEAHIRHLLfRKETRwpGYYERADYPG 572
|
....*...
gi 124802862 582 RDDKNYLK 589
Cdd:PRK06854 573 KDDENWKC 580
|
|
| DadA |
COG0665 |
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism]; |
32-141 |
1.59e-04 |
|
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
Pssm-ID: 440429 [Multi-domain] Cd Length: 364 Bit Score: 44.51 E-value: 1.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNKYKVACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWhaydtikgsdwlgdqnai 111
Cdd:COG0665 1 ATADVVVIGGGIAGLSTAYHLARRGLDVTVLERGRPGSGASGRNAGQLRPGLAALADRALVR------------------ 62
|
90 100 110
....*....|....*....|....*....|.
gi 124802862 112 hyMCREAPDSVLEL-EEFGLPFSRTKDGKIY 141
Cdd:COG0665 63 --LAREALDLWRELaAELGIDCDFRRTGVLY 91
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
33-64 |
1.67e-04 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 44.40 E-value: 1.67e-04
10 20 30
....*....|....*....|....*....|..
gi 124802862 33 HYDAVIVGAGGAGLRSALELSKNKYKVACISK 64
Cdd:PRK06292 3 KYDVIVIGAGPAGYVAARRAAKLGKKVALIEK 34
|
|
| PLN02661 |
PLN02661 |
Putative thiazole synthesis |
18-84 |
7.93e-04 |
|
Putative thiazole synthesis
Pssm-ID: 178267 Cd Length: 357 Bit Score: 42.12 E-value: 7.93e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 124802862 18 RFSNIK--------TKAY--DIIDH-HYDAVIVGAGGAGLRSALELSKN-KYKVACISKlfptrshTVAAQGGinAALG 84
Cdd:PLN02661 66 KFAPIKesivsremTRRYmtDMITYaDTDVVIVGAGSAGLSCAYELSKNpNVKVAIIEQ-------SVSPGGG--AWLG 135
|
|
| DAO |
pfam01266 |
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ... |
35-117 |
1.29e-03 |
|
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.
Pssm-ID: 426168 [Multi-domain] Cd Length: 339 Bit Score: 41.23 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 124802862 35 DAVIVGAGGAGLRSALELSKNKYKVACISK-LFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTIKGSDWLGDQNAIHY 113
Cdd:pfam01266 1 DVVVIGGGIVGLSTAYELARRGLSVTLLERgDDPGSGASGRNAGLIHPGLRYLEPSELARLALEALDLWEELEEELGIDC 80
|
....
gi 124802862 114 MCRE 117
Cdd:pfam01266 81 GFRR 84
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
34-62 |
1.56e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 41.15 E-value: 1.56e-03
10 20
....*....|....*....|....*....
gi 124802862 34 YDAVIVGAGGAGLRSALELSKNKYKVACI 62
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLI 29
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
31-62 |
1.99e-03 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 40.84 E-value: 1.99e-03
10 20 30
....*....|....*....|....*....|..
gi 124802862 31 DHHYDAVIVGAGGAGLRSALELSKNKYKVACI 62
Cdd:COG1249 1 MKDYDLVVIGAGPGGYVAAIRAAQLGLKVALV 32
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
32-60 |
8.41e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 39.13 E-value: 8.41e-03
10 20
....*....|....*....|....*....
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNKYKVA 60
Cdd:COG1231 6 RGKDVVIVGAGLAGLAAARELRKAGLDVT 34
|
|
| PRK07208 |
PRK07208 |
hypothetical protein; Provisional |
32-64 |
9.01e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 235967 [Multi-domain] Cd Length: 479 Bit Score: 39.10 E-value: 9.01e-03
10 20 30
....*....|....*....|....*....|...
gi 124802862 32 HHYDAVIVGAGGAGLRSALELSKNKYKVACISK 64
Cdd:PRK07208 3 NKKSVVIIGAGPAGLTAAYELLKRGYPVTVLEA 35
|
|
| |
