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Conserved domains on  [gi|150863923|ref|XP_001382569|]
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Beta-galactosidase (Lactase) [Scheffersomyces stipitis CBS 6054]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Bgal_small_N super family cl46900
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
16-1021 0e+00

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


The actual alignment was detected with superfamily member PRK10340:

Pssm-ID: 481240 [Multi-domain]  Cd Length: 1021  Bit Score: 827.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   16 PQTVHTNRLPTRAY---YLPSESTLS-----------LNGDWDFSYFETPQEAPipgDNF-----EDFKKIRVPGHWQLQ 76
Cdd:PRK10340    7 IQLTHENRLAPRAYffsYDSVAQARTfaretsslfllLSGQWNFHFFDHPLYVP---EAFtselmSDWGHITVPAMWQME 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   77 GYGRPHYTNVVYPFPVTPPNPPSKNPTGVYRHSFEVPEDWSKKdyEYRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFD 156
Cdd:PRK10340   84 GHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGK--QTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFD 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  157 VSDCIhKTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLLGFNKKGyIKNFQVATDLDKEYKNAELRINLQL---- 232
Cdd:PRK10340  162 ISAMV-KTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTH-INDFTVRTDFDEDYCDATLSCEVVLenla 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  233 --NTTSDVKISLHDpTKNLIFEQKFDKLVP----SSELKFPVSEPLKWTAESPYLYLLRIEIVDELEAKISCVEQQIGFR 306
Cdd:PRK10340  240 asPVVTTLEYTLFD-GERVVHSSAIDHLAIekltSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFR 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  307 TVEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEA 386
Cdd:PRK10340  319 DIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAET 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  387 DLECHGFveavripqnkETQISYDETTrqlfkeaaeftsNNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNH 466
Cdd:PRK10340  399 DVESHGF----------ANVGDISRIT------------DDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNI 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  467 AKMAKEIRRNDiQNRPIHYEGDLNAEVADMFSRMYiTPDEVLEYTKQ--KAKPLILCEYAHAMGNGPGLLRQYQDLFYEH 544
Cdd:PRK10340  457 RAMYHAAKALD-DTRLVHYEEDRDAEVVDVISTMY-TRVELMNEFGEypHPKPRILCEYAHAMGNGPGGLTEYQNVFYKH 534
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  545 EILQGGFVWEWANHGLEDVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPGLVEYKKVIEPVVILIGEEE---V 621
Cdd:PRK10340  535 DCIQGHYVWEWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTrgeL 614
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  622 SIKNTFDFIDLNEYTAEYTfleiIGLDRHVLQSGDLDISNLQPKQTR--KLALPTLEskpepGSTVIFHIIIKTKKETRG 699
Cdd:PRK10340  615 KVENKLWFTNLDDYTLHAE----VRAEGETLASGQIKLRDVAPNSEAplQITLPQLD-----AREAFLNITVTKDSRTRY 685
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  700 LRRDHIISWAQRKIQQ---GSSKILKQPGATLKCKQEGNSLQIDSEGSKLVFDLVKGRINYWGSSKELFLSDEMdqgSLT 776
Cdd:PRK10340  686 SEAGHSIATYQFPLKEntaQPVPFAPNNARPLTLEEDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREP---KIN 762
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  777 FWRPSINNDATKDAPYWKSFGLDKMQNHVRDVRVQKQNQFqVTIEVDSFVAPPILAWGFEVKQVYEVL-DKKIKLTTSLK 855
Cdd:PRK10340  763 FFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGE-VLIISRTVIAPPVFDFGMRCTYIYRIAaDGQVNVALSGE 841
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  856 PIGHkdefIPKTIPRLGYQFIISDKLgSNVRWFGRGPGESYSDKKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVL 935
Cdd:PRK10340  842 RYGD----YPHMIPCIGFTMGINGEY-DQVAYYGRGPGENYADSQQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTA 916
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  936 LESKEevkgtqaENG-----AKTFGFKAS--DSWRVDEAQHPSDIvHDRRFIRL--DYKQHGVGTEACGPGPLAEYQFRL 1006
Cdd:PRK10340  917 LTNRH-------GNGllvvpQRPINFSAWhyTQENIHAAQHTNEL-QKSDYITLnlDHQLLGLGSNSWGSEVLDSYRVWF 988
                        1050
                  ....*....|....*
gi 150863923 1007 NgPIEFEFTLDMITN 1021
Cdd:PRK10340  989 R-DFSYGFTLLPVSG 1002
 
Name Accession Description Interval E-value
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
16-1021 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 827.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   16 PQTVHTNRLPTRAY---YLPSESTLS-----------LNGDWDFSYFETPQEAPipgDNF-----EDFKKIRVPGHWQLQ 76
Cdd:PRK10340    7 IQLTHENRLAPRAYffsYDSVAQARTfaretsslfllLSGQWNFHFFDHPLYVP---EAFtselmSDWGHITVPAMWQME 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   77 GYGRPHYTNVVYPFPVTPPNPPSKNPTGVYRHSFEVPEDWSKKdyEYRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFD 156
Cdd:PRK10340   84 GHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGK--QTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFD 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  157 VSDCIhKTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLLGFNKKGyIKNFQVATDLDKEYKNAELRINLQL---- 232
Cdd:PRK10340  162 ISAMV-KTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTH-INDFTVRTDFDEDYCDATLSCEVVLenla 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  233 --NTTSDVKISLHDpTKNLIFEQKFDKLVP----SSELKFPVSEPLKWTAESPYLYLLRIEIVDELEAKISCVEQQIGFR 306
Cdd:PRK10340  240 asPVVTTLEYTLFD-GERVVHSSAIDHLAIekltSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFR 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  307 TVEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEA 386
Cdd:PRK10340  319 DIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAET 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  387 DLECHGFveavripqnkETQISYDETTrqlfkeaaeftsNNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNH 466
Cdd:PRK10340  399 DVESHGF----------ANVGDISRIT------------DDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNI 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  467 AKMAKEIRRNDiQNRPIHYEGDLNAEVADMFSRMYiTPDEVLEYTKQ--KAKPLILCEYAHAMGNGPGLLRQYQDLFYEH 544
Cdd:PRK10340  457 RAMYHAAKALD-DTRLVHYEEDRDAEVVDVISTMY-TRVELMNEFGEypHPKPRILCEYAHAMGNGPGGLTEYQNVFYKH 534
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  545 EILQGGFVWEWANHGLEDVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPGLVEYKKVIEPVVILIGEEE---V 621
Cdd:PRK10340  535 DCIQGHYVWEWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTrgeL 614
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  622 SIKNTFDFIDLNEYTAEYTfleiIGLDRHVLQSGDLDISNLQPKQTR--KLALPTLEskpepGSTVIFHIIIKTKKETRG 699
Cdd:PRK10340  615 KVENKLWFTNLDDYTLHAE----VRAEGETLASGQIKLRDVAPNSEAplQITLPQLD-----AREAFLNITVTKDSRTRY 685
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  700 LRRDHIISWAQRKIQQ---GSSKILKQPGATLKCKQEGNSLQIDSEGSKLVFDLVKGRINYWGSSKELFLSDEMdqgSLT 776
Cdd:PRK10340  686 SEAGHSIATYQFPLKEntaQPVPFAPNNARPLTLEEDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREP---KIN 762
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  777 FWRPSINNDATKDAPYWKSFGLDKMQNHVRDVRVQKQNQFqVTIEVDSFVAPPILAWGFEVKQVYEVL-DKKIKLTTSLK 855
Cdd:PRK10340  763 FFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGE-VLIISRTVIAPPVFDFGMRCTYIYRIAaDGQVNVALSGE 841
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  856 PIGHkdefIPKTIPRLGYQFIISDKLgSNVRWFGRGPGESYSDKKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVL 935
Cdd:PRK10340  842 RYGD----YPHMIPCIGFTMGINGEY-DQVAYYGRGPGENYADSQQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTA 916
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  936 LESKEevkgtqaENG-----AKTFGFKAS--DSWRVDEAQHPSDIvHDRRFIRL--DYKQHGVGTEACGPGPLAEYQFRL 1006
Cdd:PRK10340  917 LTNRH-------GNGllvvpQRPINFSAWhyTQENIHAAQHTNEL-QKSDYITLnlDHQLLGLGSNSWGSEVLDSYRVWF 988
                        1050
                  ....*....|....*
gi 150863923 1007 NgPIEFEFTLDMITN 1021
Cdd:PRK10340  989 R-DFSYGFTLLPVSG 1002
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
41-614 7.27e-143

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 441.51  E-value: 7.27e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   41 GDWDFSYFETPqEAPIPGDNFEDFKKIRVPGHWQLQGYGRPHytnvvypfpVTPPNPPSKNPTGVYRHSFEVPEDWSKKD 120
Cdd:COG3250     1 GGWKFRLGDAP-EGAKPDFDDSGWDPITVPGDWELDLYGLPD---------PFVGPWYLYNGVGWYRRTFTVPASWKGKR 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  121 YeyRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFDVSDCIhKTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLL 200
Cdd:COG3250    71 V--FLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYL-KPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDVWLE 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  201 GFNKkGYIKNFQVATDLDKeyKNAELRINLQLNTTSD----VKISLHDPTKNLIFEQKFDKLVPSSE-----LKFPVSEP 271
Cdd:COG3250   148 ATPK-VHIEDVFVTPDLDD--GSATLTVEVELENESDagvtVEVTLLDADGKVVATATAKVTLAAGEentvtLTLTVPNP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  272 LKWTAESPYLYLLRIEIVDElEAKISCVEQQIGFRTVEMK-KGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLK 350
Cdd:COG3250   225 KLWSPEDPNLYTLVVTLKDD-GKVVDTVSTRFGFRTIEIDgDGGFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRRDLE 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  351 LMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEADLECHGfveavripqnketqisydettrqlfkeaaeFTSNNPLW 430
Cdd:COG3250   304 LMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHG------------------------------MLGDDPEF 353
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  431 ENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNHAKMAKEIRRNDIqNRPIhyegdlnaevadmfsrmyitpdevley 510
Cdd:COG3250   354 LEAVEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALYEWVKELDP-TRPV--------------------------- 405
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  511 tkqkakpLILCEYAHAMGNGPG----------------LLRQYQDLFYEHEILQGGFVWEWANHGLEDVDSKGNVVYKyg 574
Cdd:COG3250   406 -------RFLSEYGHAMPNSLGggyhqpsdfeeyqalqALEEYWEAFRRRPRLAGGFIWQLNDYWPEPRDNDGNFCSW-- 476
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|.
gi 150863923  575 gdfgesphdG-VFILDGLtnsvhdPTPGLVEYKKVIEPVVI 614
Cdd:COG3250   477 ---------GlVDYYDRT------PKPAYYEVKSAWQPVLV 502
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
308-614 1.80e-110

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 344.43  E-value: 1.80e-110
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   308 VEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEAD 387
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   388 LECHGFVEAVRipqnkETQISYDETTrqlfkeaaeftsNNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNHA 467
Cdd:pfam02836   81 LETHGLWQKFG-----EIEPSYSELT------------DNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIA 143
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   468 KMAKEIRRNDiQNRPIHYEGD-----LNAEVADMFSRMYIT---PDEVLEY----TKQKAKPLILCEYAHAMGNGPGLLR 535
Cdd:pfam02836  144 AMYAATKSLD-PTRPVHYEGVgidpeVDDIILDIYSRMYEDyghPEVIEKYledwYKKPQKPIIICEYGHAMGNSPGGLQ 222
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   536 QYQDLFYEHEILQGGFVWEWANHGLE-DVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPGLVEYKKVIEPVVI 614
Cdd:pfam02836  223 EYQDLFYKYPEYQGGFIWDWHDQGIQkRDPNVGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
741-1016 3.19e-73

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 243.26  E-value: 3.19e-73
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    741 SEGSKLVFDLVKGRINYWGSSKELFLSDEMdqgSLTFWRPSINND----ATKDAPYWKSFGLDKMQNHVRDVRVQKQnqF 816
Cdd:smart01038    2 GGGFSYTFDKATGALTSWTYNGKELLLRGP---KPNFWRAPTDNDrgngPNAWAARWKAAGLDRLTTRVRSVEVEQD--S 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    817 QVTIEVDSFVAPPIlAWGFEVKQVYEVL-DKKIKLTTSLKPIGHKdefiPKTIPRLGYQFIISDKLgSNVRWFGRGPGES 895
Cdd:smart01038   77 DVVVTVEYLLAAPS-GWGFTVTVTYTIDgDGEVKVDVTFTPGGGA----LPDLPRIGLRFRLPDEL-EQVEWYGRGPGEN 150
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    896 YSDKKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVLLeSKEEVKGTQAEnGAKTFGFKAS--DSWRVDEAQHPSDI 973
Cdd:smart01038  151 YPDRKQSARLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTL-TDDAGNGLRVT-ADQPFSFSALpySAEDLEEAKHPHEL 228
                           250       260       270       280
                    ....*....|....*....|....*....|....*....|....*
gi 150863923    974 V-HDRRFIRLDYKQHGVGTEA-CGPGPLAEYQFRlNGPIEFEFTL 1016
Cdd:smart01038  229 PpRDGTVLNLDAKQMGVGGDDsWGPGVLPEYRLP-ADEYSFSFTL 272
 
Name Accession Description Interval E-value
ebgA PRK10340
cryptic beta-D-galactosidase subunit alpha; Reviewed
16-1021 0e+00

cryptic beta-D-galactosidase subunit alpha; Reviewed


Pssm-ID: 236673 [Multi-domain]  Cd Length: 1021  Bit Score: 827.78  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   16 PQTVHTNRLPTRAY---YLPSESTLS-----------LNGDWDFSYFETPQEAPipgDNF-----EDFKKIRVPGHWQLQ 76
Cdd:PRK10340    7 IQLTHENRLAPRAYffsYDSVAQARTfaretsslfllLSGQWNFHFFDHPLYVP---EAFtselmSDWGHITVPAMWQME 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   77 GYGRPHYTNVVYPFPVTPPNPPSKNPTGVYRHSFEVPEDWSKKdyEYRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFD 156
Cdd:PRK10340   84 GHGKLQYTDEGFPFPIDVPFVPSDNPTGAYQRTFTLSDGWQGK--QTIIKFDGVETYFEVYVNGQYVGFSKGSRLTAEFD 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  157 VSDCIhKTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLLGFNKKGyIKNFQVATDLDKEYKNAELRINLQL---- 232
Cdd:PRK10340  162 ISAMV-KTGDNLLCVRVMQWADSTYLEDQDMWWLAGIFRDVYLVGKPLTH-INDFTVRTDFDEDYCDATLSCEVVLenla 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  233 --NTTSDVKISLHDpTKNLIFEQKFDKLVP----SSELKFPVSEPLKWTAESPYLYLLRIEIVDELEAKISCVEQQIGFR 306
Cdd:PRK10340  240 asPVVTTLEYTLFD-GERVVHSSAIDHLAIekltSASFAFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFR 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  307 TVEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEA 386
Cdd:PRK10340  319 DIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTAHYPNDPRFYELCDIYGLFVMAET 398
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  387 DLECHGFveavripqnkETQISYDETTrqlfkeaaeftsNNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNH 466
Cdd:PRK10340  399 DVESHGF----------ANVGDISRIT------------DDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYGCNI 456
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  467 AKMAKEIRRNDiQNRPIHYEGDLNAEVADMFSRMYiTPDEVLEYTKQ--KAKPLILCEYAHAMGNGPGLLRQYQDLFYEH 544
Cdd:PRK10340  457 RAMYHAAKALD-DTRLVHYEEDRDAEVVDVISTMY-TRVELMNEFGEypHPKPRILCEYAHAMGNGPGGLTEYQNVFYKH 534
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  545 EILQGGFVWEWANHGLEDVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPGLVEYKKVIEPVVILIGEEE---V 621
Cdd:PRK10340  535 DCIQGHYVWEWCDHGIQAQDDNGNVWYKYGGDYGDYPNNYNFCIDGLIYPDQTPGPGLKEYKQVIAPVKIHALDLTrgeL 614
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  622 SIKNTFDFIDLNEYTAEYTfleiIGLDRHVLQSGDLDISNLQPKQTR--KLALPTLEskpepGSTVIFHIIIKTKKETRG 699
Cdd:PRK10340  615 KVENKLWFTNLDDYTLHAE----VRAEGETLASGQIKLRDVAPNSEAplQITLPQLD-----AREAFLNITVTKDSRTRY 685
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  700 LRRDHIISWAQRKIQQ---GSSKILKQPGATLKCKQEGNSLQIDSEGSKLVFDLVKGRINYWGSSKELFLSDEMdqgSLT 776
Cdd:PRK10340  686 SEAGHSIATYQFPLKEntaQPVPFAPNNARPLTLEEDRLSCTVRGYNFAITFSKVSGKLTSWQVNGESLLTREP---KIN 762
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  777 FWRPSINNDATKDAPYWKSFGLDKMQNHVRDVRVQKQNQFqVTIEVDSFVAPPILAWGFEVKQVYEVL-DKKIKLTTSLK 855
Cdd:PRK10340  763 FFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQSDGE-VLIISRTVIAPPVFDFGMRCTYIYRIAaDGQVNVALSGE 841
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  856 PIGHkdefIPKTIPRLGYQFIISDKLgSNVRWFGRGPGESYSDKKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVL 935
Cdd:PRK10340  842 RYGD----YPHMIPCIGFTMGINGEY-DQVAYYGRGPGENYADSQQANLIDIYRSTVDAMFENYPFPQNNGNRQHVRWTA 916
                         970       980       990      1000      1010      1020      1030      1040
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  936 LESKEevkgtqaENG-----AKTFGFKAS--DSWRVDEAQHPSDIvHDRRFIRL--DYKQHGVGTEACGPGPLAEYQFRL 1006
Cdd:PRK10340  917 LTNRH-------GNGllvvpQRPINFSAWhyTQENIHAAQHTNEL-QKSDYITLnlDHQLLGLGSNSWGSEVLDSYRVWF 988
                        1050
                  ....*....|....*
gi 150863923 1007 NgPIEFEFTLDMITN 1021
Cdd:PRK10340  989 R-DFSYGFTLLPVSG 1002
lacZ PRK09525
beta-galactosidase;
16-933 0e+00

beta-galactosidase;


Pssm-ID: 236548 [Multi-domain]  Cd Length: 1027  Bit Score: 596.14  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   16 PQTVHTNRLPTR---AYY---------LPSESTLSLNGDWDFSYFETPQEAP---IPGDnFEDFKKIRVPGHWQLQGYGR 80
Cdd:PRK09525   20 PGVTQLNRLPAHppfASWrnseaarddRPSQQRQSLNGEWRFSYFPAPEAVPeswLECD-LPDADTIPVPSNWQLHGYDA 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   81 PHYTNVVYPFPVTPPNPPSKNPTGVYRHSFEVPEDWSKKDYEyRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFDVSDC 160
Cdd:PRK09525   99 PIYTNVTYPIPVNPPFVPEENPTGCYSLTFTVDESWLQSGQT-RIIFDGVNSAFHLWCNGRWVGYSQDSRLPAEFDLSPF 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  161 IHkTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLLgfNK-KGYIKNFQVATDLDKEYKNAELRINLQLNTTSD-- 237
Cdd:PRK09525  178 LR-AGENRLAVMVLRWSDGSYLEDQDMWRMSGIFRDVSLL--HKpTTQLSDFHITTELDDDFRRAVLEVEAQVNGELRde 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  238 --VKISLHDPTKnLIFE--QKF------------DKLvpssELKFPVSEPLKWTAESPYLYLLRIEIVD------ELEAK 295
Cdd:PRK09525  255 lrVTVQLWDGET-LVASgtAPFgteiidergayaDRV----TLRLNVENPKLWSAETPNLYRAVVSLLDadgtliEAEAY 329
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  296 iscveqQIGFRTVEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELA 375
Cdd:PRK09525  330 ------DVGFRKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCSHYPNHPLWYELC 403
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  376 NQLGFWVLDEADLECHGFVeavriPQNKetqisydettrqlfkeaaefTSNNPLWENAYIDRANQLVHRDCNQPCIIIWS 455
Cdd:PRK09525  404 DRYGLYVVDEANIETHGMV-----PMNR--------------------LSDDPRWLPAMSERVTRMVQRDRNHPSIIIWS 458
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  456 LGNEAFFGRNHAKMAKEIRRNDiQNRPIHYE-GDLNAEVADMFSRMYITPDE------VLEYTKQK-------AKPLILC 521
Cdd:PRK09525  459 LGNESGHGANHDALYRWIKSND-PSRPVQYEgGGADTAATDIICPMYARVDEdqpfpaVPKWSIKKwislpgeTRPLILC 537
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  522 EYAHAMGNGPGLLRQYQDLFYEHEILQGGFVWEWANHGLEDVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPG 601
Cdd:PRK09525  538 EYAHAMGNSLGGFAKYWQAFRQYPRLQGGFIWDWVDQGLTKYDENGNPWWAYGGDFGDTPNDRQFCMNGLVFPDRTPHPA 617
                         650       660       670       680       690       700       710       720
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  602 LVEYKKVIEPV-VILIGEEEVSIKNTfdfidlNEYTAEYTFLEI----IGLDRHVLQSGDLDIsNLQPKQTRKLALPTLE 676
Cdd:PRK09525  618 LYEAKHAQQFFqFSLLSTTPLTIEVT------SEYLFRHSDNELlhwsVALDGKPLASGEVPL-DLAPQGSQRITLPELP 690
                         730       740       750       760       770       780       790       800
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  677 SkPEPGSTVIFHIIIKTKKETRGLRRDHIISWAQRKIQQGSSKILK-QPGATLKCKQEGNSLQIDSEGSKLVFDLVKGRI 755
Cdd:PRK09525  691 Q-PESAGQLWLNVEVVQPNATAWSEAGHRSAWQQWRLPEPLSLPLPtASHAAPQLTQDEQDFCIELGNQRWQFNRQSGLL 769
                         810       820       830       840       850       860       870       880
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  756 -NYWGSSKELFLSDEMDQgsltFWRPSINND-----ATKDAPY-----WKSFGLDKMQNHVRDVRVQK-QNQFQVTIEVD 823
Cdd:PRK09525  770 sQWWVGGKEQLLTPLRDQ----FTRAPLDNDigvseATRIDPNawverWKAAGLYQLEARLLQCDADTlADAVLITTEHA 845
                         890       900       910       920       930       940       950       960
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  824 SFVAPPILA---WGFEVKQVYEV-LDKKIKLTTSLKPighkdefipktIPRLGYQFIISDKlGSNVRWFGRGPGESYSDK 899
Cdd:PRK09525  846 YQHQGKTLFisrKTYRIDGQGEMtIDVDVEVASDLPP-----------PARIGLTCQLAQV-AERVSWLGLGPHENYPDR 913
                         970       980       990
                  ....*....|....*....|....*....|....
gi 150863923  900 KEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDW 933
Cdd:PRK09525  914 LLAACFGRWDLPLSDMHTPYIFPSENGLRCGTRE 947
LacZ COG3250
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];
41-614 7.27e-143

Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism];


Pssm-ID: 442481 [Multi-domain]  Cd Length: 638  Bit Score: 441.51  E-value: 7.27e-143
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   41 GDWDFSYFETPqEAPIPGDNFEDFKKIRVPGHWQLQGYGRPHytnvvypfpVTPPNPPSKNPTGVYRHSFEVPEDWSKKD 120
Cdd:COG3250     1 GGWKFRLGDAP-EGAKPDFDDSGWDPITVPGDWELDLYGLPD---------PFVGPWYLYNGVGWYRRTFTVPASWKGKR 70
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  121 YeyRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFDVSDCIhKTGKNDLVIRVYQWSSSSYIEDQDQWWLSGIFRDVYLL 200
Cdd:COG3250    71 V--FLHFEGVDTAAEVWVNGKKVGYHEGGFTPFEFDITDYL-KPGENVLAVRVDNPSDGSYLEGQDWWRTSGIYRDVWLE 147
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  201 GFNKkGYIKNFQVATDLDKeyKNAELRINLQLNTTSD----VKISLHDPTKNLIFEQKFDKLVPSSE-----LKFPVSEP 271
Cdd:COG3250   148 ATPK-VHIEDVFVTPDLDD--GSATLTVEVELENESDagvtVEVTLLDADGKVVATATAKVTLAAGEentvtLTLTVPNP 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  272 LKWTAESPYLYLLRIEIVDElEAKISCVEQQIGFRTVEMK-KGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLK 350
Cdd:COG3250   225 KLWSPEDPNLYTLVVTLKDD-GKVVDTVSTRFGFRTIEIDgDGGFLLNGKPVFLKGVNRHEDWPDDGRAVTDEAMRRDLE 303
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  351 LMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEADLECHGfveavripqnketqisydettrqlfkeaaeFTSNNPLW 430
Cdd:COG3250   304 LMKEAGFNAVRTSHYPEDPEFYDLCDELGLLVWDEAPFEWHG------------------------------MLGDDPEF 353
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  431 ENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNHAKMAKEIRRNDIqNRPIhyegdlnaevadmfsrmyitpdevley 510
Cdd:COG3250   354 LEAVEAELREMVRRDRNHPSIILWSGGNESGGGPNFAALYEWVKELDP-TRPV--------------------------- 405
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  511 tkqkakpLILCEYAHAMGNGPG----------------LLRQYQDLFYEHEILQGGFVWEWANHGLEDVDSKGNVVYKyg 574
Cdd:COG3250   406 -------RFLSEYGHAMPNSLGggyhqpsdfeeyqalqALEEYWEAFRRRPRLAGGFIWQLNDYWPEPRDNDGNFCSW-- 476
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|.
gi 150863923  575 gdfgesphdG-VFILDGLtnsvhdPTPGLVEYKKVIEPVVI 614
Cdd:COG3250   477 ---------GlVDYYDRT------PKPAYYEVKSAWQPVLV 502
Glyco_hydro_2_C pfam02836
Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, ...
308-614 1.80e-110

Glycosyl hydrolases family 2, TIM barrel domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 397119 [Multi-domain]  Cd Length: 302  Bit Score: 344.43  E-value: 1.80e-110
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   308 VEMKKGLICVNGVPILIRGVNRHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEAD 387
Cdd:pfam02836    1 VEVKDGLFLINGKPFYFRGVNRHEDHDRRGRGFDMDLMVKDIQLMKQNNINAVRTSHYPNHPEWYQLCDEYGIYVIDEAN 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   388 LECHGFVEAVRipqnkETQISYDETTrqlfkeaaeftsNNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNEAFFGRNHA 467
Cdd:pfam02836   81 LETHGLWQKFG-----EIEPSYSELT------------DNPEWLPAHLERAEELVQRDKNHPSVIIWSLGNESGAGENIA 143
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   468 KMAKEIRRNDiQNRPIHYEGD-----LNAEVADMFSRMYIT---PDEVLEY----TKQKAKPLILCEYAHAMGNGPGLLR 535
Cdd:pfam02836  144 AMYAATKSLD-PTRPVHYEGVgidpeVDDIILDIYSRMYEDyghPEVIEKYledwYKKPQKPIIICEYGHAMGNSPGGLQ 222
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   536 QYQDLFYEHEILQGGFVWEWANHGLE-DVDSKGNVVYKYGGDFGESPHDGVFILDGLTNSVHDPTPGLVEYKKVIEPVVI 614
Cdd:pfam02836  223 EYQDLFYKYPEYQGGFIWDWHDQGIQkRDPNVGGEWYWYGGDFGDRPSDYRFCGNGLFFADRTPKPALFELKKRYWPIKI 302
Bgal_small_N smart01038
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
741-1016 3.19e-73

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 214988 [Multi-domain]  Cd Length: 272  Bit Score: 243.26  E-value: 3.19e-73
                            10        20        30        40        50        60        70        80
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    741 SEGSKLVFDLVKGRINYWGSSKELFLSDEMdqgSLTFWRPSINND----ATKDAPYWKSFGLDKMQNHVRDVRVQKQnqF 816
Cdd:smart01038    2 GGGFSYTFDKATGALTSWTYNGKELLLRGP---KPNFWRAPTDNDrgngPNAWAARWKAAGLDRLTTRVRSVEVEQD--S 76
                            90       100       110       120       130       140       150       160
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    817 QVTIEVDSFVAPPIlAWGFEVKQVYEVL-DKKIKLTTSLKPIGHKdefiPKTIPRLGYQFIISDKLgSNVRWFGRGPGES 895
Cdd:smart01038   77 DVVVTVEYLLAAPS-GWGFTVTVTYTIDgDGEVKVDVTFTPGGGA----LPDLPRIGLRFRLPDEL-EQVEWYGRGPGEN 150
                           170       180       190       200       210       220       230       240
                    ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    896 YSDKKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVLLeSKEEVKGTQAEnGAKTFGFKAS--DSWRVDEAQHPSDI 973
Cdd:smart01038  151 YPDRKQSARLGRYSSTVDDLFTPYVRPQENGNRTDVRWLTL-TDDAGNGLRVT-ADQPFSFSALpySAEDLEEAKHPHEL 228
                           250       260       270       280
                    ....*....|....*....|....*....|....*....|....*
gi 150863923    974 V-HDRRFIRLDYKQHGVGTEA-CGPGPLAEYQFRlNGPIEFEFTL 1016
Cdd:smart01038  229 PpRDGTVLNLDAKQMGVGGDDsWGPGVLPEYRLP-ADEYSFSFTL 272
Bgal_small_N pfam02929
Beta galactosidase small chain; This domain comprises the small chain of dimeric ...
741-1016 2.06e-55

Beta galactosidase small chain; This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.


Pssm-ID: 460751  Cd Length: 223  Bit Score: 191.55  E-value: 2.06e-55
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   741 SEGSKLVFDLVKGRINYWGS-SKELFLSDEmdQGSLTFWRPSINNDATkdapywksfgldkmqnhvrdvrvqkqnqfqvt 819
Cdd:pfam02929    2 GGDFSYTFDKATGTLTSYKYdGKELLTEPL--TGRPNFWRAPTDNDVT-------------------------------- 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   820 ievdsfvappilawgfevkQVYEVL-DKKIKLTTSLKPIGHKDefiPKTIPRLGYQFIISDKLgSNVRWFGRGPGESYSD 898
Cdd:pfam02929   48 -------------------VTYTIYgDGTIKVDVTLKPDGLKG---LPELPRFGLRLQLPKSF-EQVEWYGRGPGENYPD 104
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   899 KKEGQWFDVHRLPLDKLDYSYDYPQENGNHEDTDWVLLeSKEEVKGTQAENGAKTFGFKAS--DSWRVDEAQHPSDIVHD 976
Cdd:pfam02929  105 RKTGARLGIYESTVDDLFTPYIRPQENGNRTDVRWLTL-TDGDGGGLLVFVGDGPFSFSALpyTPEELEAAKHPYELPKS 183
                          250       260       270       280
                   ....*....|....*....|....*....|....*....|.
gi 150863923   977 RR-FIRLDYKQHGVGTEACGPGPLAEYQFRlNGPIEFEFTL 1016
Cdd:pfam02929  184 DEtVLNLDYAQMGVGDNSWGPGVLPEYRLP-AKEYSFSFTL 223
Glyco_hydro_2_N pfam02837
Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, ...
38-200 2.78e-40

Glycosyl hydrolases family 2, sugar binding domain; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.


Pssm-ID: 397120 [Multi-domain]  Cd Length: 169  Bit Score: 146.23  E-value: 2.78e-40
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923    38 SLNGDWDFSYFETPQEAP--IPGDNFEDFKKIRVPGHWQLQgygrPHYTNVVYPFPVTPPNPPSKNPTGVYRHSFEVPED 115
Cdd:pfam02837    3 SLNGEWAFALFDAPCGAPqsWWESALQESRTIAVPSSWNDQ----PIYTNVEYPIDFADPFIPTYNGTGWYQRTFFIPSK 78
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   116 WSKKdyEYRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFDVSDCIhKTGKNDLVIRVYQWSSSSYIEDQ------DQWW 189
Cdd:pfam02837   79 WAGQ--RIRLRFDGVTHYGEVWVNGQWVGEHQGGYTPFEFDLTPYV-IAGKNRIAVKVLNWSDG*YIEDQngkyfhDFWN 155
                          170
                   ....*....|.
gi 150863923   190 LSGIFRDVYLL 200
Cdd:pfam02837  156 YSGIYRDVSLL 166
PRK10150 PRK10150
beta-D-glucuronidase; Provisional
106-556 4.34e-28

beta-D-glucuronidase; Provisional


Pssm-ID: 236657 [Multi-domain]  Cd Length: 604  Bit Score: 120.88  E-value: 4.34e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  106 YRHSFEVPEDWskKDYEYRLRFEGVDNSYHLFLNGKLIGYNEGSRNAAEFDVSDCIHKTGKNDLVIRV---YQWSS---S 179
Cdd:PRK10150   69 YQREVFIPKGW--AGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYTPFEADITPYVYAGKSVRITVCVnneLNWQTlppG 146
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  180 SYIED------QDQWW----LSGIFRDVYLLGfNKKGYIKNFQVATDLDKEYKNAELRINLQLNTTSD-VKISLHDPTKN 248
Cdd:PRK10150  147 NVIEDgngkkkQKYNFdffnYAGIHRPVMLYT-TPKTHIDDITVVTELAQDLNHASVDWSVETNGDVDsVSVTLRDADGQ 225
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  249 LIFEQKfdklvpSSELKFPVSEPLKWTAESPYLYLLRIEIVDElEAKISCVEQQIGFRTVEMKKGLICVNGVPILIRGVN 328
Cdd:PRK10150  226 VVATGQ------GTSGTLQVVNPHLWQPGEGYLYTLCVELAKS-GTECDTYPLRFGIRSVAVKGGQFLINGKPFYFKGFG 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  329 RHEHHPKFGRSVPFDFVERDLKLMKAHNINAIRTAHYPNHPKFYELANQLGFWVLDEadlechgfVEAVRIPQNKETQIS 408
Cdd:PRK10150  299 KHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTSHYPYSEEMLDLADRHGIVVIDE--------TPAVGLNLSFGAGLE 370
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  409 YDETTRQLFKEAAEftsnNPLWENAYIDRANQLVHRDCNQPCIIIWSLGNE---------AFFgrnhAKMAKEIRRNDIQ 479
Cdd:PRK10150  371 AGNKPKETYSEEAV----NGETQQAHLQAIRELIARDKNHPSVVMWSIANEpasreqgarEYF----APLAELTRKLDPT 442
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923  480 nRPIHYEGDLNA-----EVADMF-----SRMY--------------ITPDEVLEYTKQKAKPLILCEYA-------HAMG 528
Cdd:PRK10150  443 -RPVTCVNVMFAtpdtdTVSDLVdvlclNRYYgwyvdsgdletaekVLEKELLAWQEKLHKPIIITEYGadtlaglHSMY 521
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 150863923  529 NGPgLLRQYQDLFYE--HEILQ------GGFVWEWA 556
Cdd:PRK10150  522 DDM-WSEEYQCAFLDmyHRVFDrvpavvGEQVWNFA 556
LacZ_4 pfam16353
Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and ...
621-710 9.61e-14

Beta-galactosidase, domain 4; This entry represents domain 4 found in beta-galactosidase and it is organized in a jelly-roll type barrel (Rutkiewicz-Krotewicz M. et al. Crystals 2018, 8(1), 13, https://doi.org/10.3390/cryst8010013).


Pssm-ID: 465101 [Multi-domain]  Cd Length: 88  Bit Score: 67.60  E-value: 9.61e-14
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   621 VSIKNTFDFIDLNEYTAEYTFLEiiglDRHVLQSGDLDISNLQPKQTRKLALPtlESKPEPGSTVIFHIIIKTKKETRGL 700
Cdd:pfam16353    1 VTITNRYDFTDLDDYDLSWELLA----DGKVVASGTLELPDVAPGESATVTLP--LPLPGLAGEYFLTVSFRLKEDTPWA 74
                           90
                   ....*....|
gi 150863923   701 RRDHIISWAQ 710
Cdd:pfam16353   75 PAGHEVAWEQ 84
Glyco_hydro_2 pfam00703
Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and ...
207-306 2.98e-10

Glycosyl hydrolases family 2; This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.


Pssm-ID: 395572 [Multi-domain]  Cd Length: 106  Bit Score: 58.26  E-value: 2.98e-10
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 150863923   207 YIKNFQVATDLDKEyKNAELRINLQLNTTSDVKISL-------HDPTKNLIFEQKFDKLVPSSELKFPVSEPLKWTAESP 279
Cdd:pfam00703    2 HIEDVFITPDLDDD-KTAKVTVEVELENDGDASVEVtleteikDADGKTVAAAAKVLVLGAGETTELEVKNPKLWSPETP 80
                           90       100
                   ....*....|....*....|....*..
gi 150863923   280 YLYLLRIEIVDElEAKISCVEQQIGFR 306
Cdd:pfam00703   81 NLYTLTVELDKD-GKVIDEVSTRFGFR 106
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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