|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00026 |
PLN00026 |
aquaporin NIP; Provisional |
3-300 |
0e+00 |
|
aquaporin NIP; Provisional
Pssm-ID: 177663 [Multi-domain] Cd Length: 298 Bit Score: 552.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 3 GPEEAGTPTVTAPNTPGTPGGPLFTGLRVDSLSYSDRKIMPKCKCLPVTAPNWGQPHTCFLDIPSPDVSLTRKLGAEFVG 82
Cdd:PLN00026 1 MDNEEVPSAPSTPATPGTPGGPLFGGFRVDSLSYGDRKLLPSCKCFPVEALEWGRLPTCFCDLPPPDVSLTRKLGAEFVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 83 TFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSAS 162
Cdd:PLN00026 81 TFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 163 ICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGS 242
Cdd:PLN00026 161 ICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGS 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 243 MNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLVKLRDDETDPPRPVRSFRR 300
Cdd:PLN00026 241 MNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPVRSFRR 298
|
|
| GlpF |
COG0580 |
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ... |
71-282 |
6.65e-57 |
|
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];
Pssm-ID: 440345 [Multi-domain] Cd Length: 232 Bit Score: 183.02 E-value: 6.65e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 71 SLTRKLGAEFVGTFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQ 150
Cdd:COG0580 1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTKGGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALAVAGRFPWKD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 151 VPAYIAAQVSASICASFALKGVFHP--------FMSGGV--TVPS--VSTGQAFALEFFITFNLLFVVTAVATDTRAVGE 218
Cdd:COG0580 81 VLPYIIAQLLGAFLGAALVYLIYGGhfdatedgGAKLGVfaTSPAigYSLGAAFLTEIIGTFVLVFVILGITDKRAAPGG 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 219 LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKI------WIYLVAPTLGAVVGAGAYTLV 282
Cdd:COG0580 161 LAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHALGKGGsdwgylWVPIVAPILGAALAALLYRAL 230
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
74-282 |
5.30e-52 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 170.13 E-value: 5.30e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 74 RKLGAEFVGTFILIFMATAGPI-VNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:cd00333 1 RKYLAEFLGTFLLVFFGCGSVLaVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKGVF-----------HPFMSGGVTVPS--VSTGQAFALEFFITFNLLFVVTAVATDTR--AVG 217
Cdd:cd00333 81 PYIIAQLLGAILGAALLYGLYyglyleflganNIVAGIFGTYPSpgVSNGNAFFVEFIGTFILVLVVFATTDDPNgpPPG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 218 ELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKI---WIYLVAPTLGAVVGAGAYTLV 282
Cdd:cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWhyfWVYWVGPLIGAIAGALVYDYV 228
|
|
| MIP |
pfam00230 |
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ... |
70-279 |
1.98e-50 |
|
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.
Pssm-ID: 395174 [Multi-domain] Cd Length: 223 Bit Score: 165.95 E-value: 1.98e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 70 VSLTRKLGAEFVGTFILIFmATAGPIVNQKY----DHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRH 145
Cdd:pfam00230 5 VSFLRAVIAEFLATLLFVF-FGVGSALGVKKlvssLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAVTLALLVGRR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 146 FPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTV----PSVSTGQAFALEFFITFNLLFVVTAVATDTRAV--GEL 219
Cdd:pfam00230 84 FSLLRAIFYIVAQLLGAIAGAALLYGVTVGLQRAGLFAntlaPGVNAGQAFVVEIILTFQLVYCVFATTDDRRNGslGTV 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 220 AGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAY 279
Cdd:pfam00230 164 APLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWKWDDHWVYWVGPFIGAALGALVY 223
|
|
| MIP |
TIGR00861 |
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ... |
78-279 |
1.16e-46 |
|
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273306 [Multi-domain] Cd Length: 216 Bit Score: 156.30 E-value: 1.16e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 78 AEFVGTFILIFMATAGPIVNQKYD-----HAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGaygavGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKGVFHPFMSGGVTV-----PSVSTGQAFALEFFITFNLLFVVTAVATDTRAV--GELAGIAVG 225
Cdd:TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVngsasAGVSSGQAFFVEFIGTAILVLVIFATTDDRNRVprGGFAPLAIG 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 224117684 226 ATVMLNILVAGPSTGGSMNPVRTLGPAIAAG--NYKKIWIYLVAPTLGAVVGAGAY 279
Cdd:TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGlaGWGNHWVYWVGPIIGAILGALVY 216
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PLN00026 |
PLN00026 |
aquaporin NIP; Provisional |
3-300 |
0e+00 |
|
aquaporin NIP; Provisional
Pssm-ID: 177663 [Multi-domain] Cd Length: 298 Bit Score: 552.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 3 GPEEAGTPTVTAPNTPGTPGGPLFTGLRVDSLSYSDRKIMPKCKCLPVTAPNWGQPHTCFLDIPSPDVSLTRKLGAEFVG 82
Cdd:PLN00026 1 MDNEEVPSAPSTPATPGTPGGPLFGGFRVDSLSYGDRKLLPSCKCFPVEALEWGRLPTCFCDLPPPDVSLTRKLGAEFVG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 83 TFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSAS 162
Cdd:PLN00026 81 TFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALRHFPWKHVPAYIAAQVSAS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 163 ICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGS 242
Cdd:PLN00026 161 ICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVMLNILVAGPSTGGS 240
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 243 MNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLVKLRDDETDPPRPVRSFRR 300
Cdd:PLN00026 241 MNPVRTLGPAVAAGNYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPVRSFRR 298
|
|
| PLN00184 |
PLN00184 |
aquaporin NIP1; Provisional |
67-286 |
5.92e-71 |
|
aquaporin NIP1; Provisional
Pssm-ID: 177778 Cd Length: 296 Bit Score: 221.43 E-value: 5.92e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 67 SPDVSLTRKLGAEFVGTFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHF 146
Cdd:PLN00184 48 SVSVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGRF 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 147 PWVQVPAYIAAQVSASICASFALKGVF---HPFMSGGV-----TVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGE 218
Cdd:PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFgldHDVCSGKHdvfigSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIGE 207
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 219 LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLVKLRD 286
Cdd:PLN00184 208 LAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYGCYKGIWIYIVAPTLGAIAGAWVYNTVRYTD 275
|
|
| PLN00182 |
PLN00182 |
putative aquaporin NIP4; Provisional |
70-300 |
3.78e-69 |
|
putative aquaporin NIP4; Provisional
Pssm-ID: 165748 Cd Length: 283 Bit Score: 216.31 E-value: 3.78e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 70 VSLTRKLGAEFVGTFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWV 149
Cdd:PLN00182 39 VCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWY 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 150 QVPAYIAAQVSASICASFALKGVFH--PFMSGGvTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVGAT 227
Cdd:PLN00182 119 QVPLYIGAQLTGSLLASLTLRLMFNvtPEAFFG-TTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIAVGMT 197
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 224117684 228 VMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLVKLRDDETDPPRPVRSFRR 300
Cdd:PLN00182 198 IILNVFVAGPISGASMNPARSLGPAIVMGRYKGIWVYIVGPFVGIIAGGFVYNLIRFTDKPLRELTKSASFLR 270
|
|
| GlpF |
COG0580 |
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) ... |
71-282 |
6.65e-57 |
|
Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family) [Carbohydrate transport and metabolism];
Pssm-ID: 440345 [Multi-domain] Cd Length: 232 Bit Score: 183.02 E-value: 6.65e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 71 SLTRKLGAEFVGTFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQ 150
Cdd:COG0580 1 SLMKRLLAEFLGTFILVLLGCGVVAVLAGTKGGIGWLGIALAWGLAVLAGVYAFGHISGAHLNPAVTLALAVAGRFPWKD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 151 VPAYIAAQVSASICASFALKGVFHP--------FMSGGV--TVPS--VSTGQAFALEFFITFNLLFVVTAVATDTRAVGE 218
Cdd:COG0580 81 VLPYIIAQLLGAFLGAALVYLIYGGhfdatedgGAKLGVfaTSPAigYSLGAAFLTEIIGTFVLVFVILGITDKRAAPGG 160
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 219 LAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKI------WIYLVAPTLGAVVGAGAYTLV 282
Cdd:COG0580 161 LAPLAIGLLVAAIGLSLGPLTGYAINPARDLGPRLFHALGKGGsdwgylWVPIVAPILGAALAALLYRAL 230
|
|
| PLN00183 |
PLN00183 |
putative aquaporin NIP7; Provisional |
66-292 |
3.50e-56 |
|
putative aquaporin NIP7; Provisional
Pssm-ID: 215092 Cd Length: 274 Bit Score: 182.75 E-value: 3.50e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 66 PSPDVSLTRKLGAEFVGTFILIFMATAGPIVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRH 145
Cdd:PLN00183 38 YDMDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH 117
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 146 FPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFFITFNLLFVVTAVATDTRAVGELAGIAVG 225
Cdd:PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVIG 197
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 224117684 226 ATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLVKLRDDETDPP 292
Cdd:PLN00183 198 IAIGLAVLITGPVSGGSMNPARSLGPAIVSWDFKDIWIYITAPTIGAVAGALMFHLLRLRTQPCSPN 264
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
74-282 |
5.30e-52 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 170.13 E-value: 5.30e-52
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 74 RKLGAEFVGTFILIFMATAGPI-VNQKYDHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:cd00333 1 RKYLAEFLGTFLLVFFGCGSVLaVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGRFPLIRVI 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKGVF-----------HPFMSGGVTVPS--VSTGQAFALEFFITFNLLFVVTAVATDTR--AVG 217
Cdd:cd00333 81 PYIIAQLLGAILGAALLYGLYyglyleflganNIVAGIFGTYPSpgVSNGNAFFVEFIGTFILVLVVFATTDDPNgpPPG 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 218 ELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKI---WIYLVAPTLGAVVGAGAYTLV 282
Cdd:cd00333 161 GLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWhyfWVYWVGPLIGAIAGALVYDYV 228
|
|
| MIP |
pfam00230 |
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two ... |
70-279 |
1.98e-50 |
|
Major intrinsic protein; MIP (Major Intrinsic Protein) family proteins exhibit essentially two distinct types of channel properties: (1) specific water transport by the aquaporins, and (2) small neutral solutes transport, such as glycerol by the glycerol facilitators.
Pssm-ID: 395174 [Multi-domain] Cd Length: 223 Bit Score: 165.95 E-value: 1.98e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 70 VSLTRKLGAEFVGTFILIFmATAGPIVNQKY----DHAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRH 145
Cdd:pfam00230 5 VSFLRAVIAEFLATLLFVF-FGVGSALGVKKlvssLAVSGLLAVALAFGLALATLVYCAGHISGAHLNPAVTLALLVGRR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 146 FPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTV----PSVSTGQAFALEFFITFNLLFVVTAVATDTRAV--GEL 219
Cdd:pfam00230 84 FSLLRAIFYIVAQLLGAIAGAALLYGVTVGLQRAGLFAntlaPGVNAGQAFVVEIILTFQLVYCVFATTDDRRNGslGTV 163
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 220 AGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAY 279
Cdd:pfam00230 164 APLAIGFAVFLNHLAGGPYTGASMNPARSFGPAVVLWKWDDHWVYWVGPFIGAALGALVY 223
|
|
| MIP |
TIGR00861 |
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is ... |
78-279 |
1.16e-46 |
|
MIP family channel proteins; 1.A.8 The Major Intrinsic Protein (MIP) FamilyThe MIP family is large and diverse, possessing over 100 members that all form transmembrane channels. These channel proteins function in water, smallcarbohydrate (e.g., glycerol), urea, NH3, CO2 and possibly ion transport by an energy independent mechanism. They are found ubiquitously in bacteria, archaeaand eukaryotes. The MIP family contains two major groups of channels: aquaporins and glycerol facilitators.The known aquaporins cluster loosely together as do the known glycerol facilitators. MIP family proteins are believed to form aqueous pores that selectively allow passive transport of their solute(s) across the membrane with minimal apparent recognition. Aquaporins selectively transport water (but not glycerol) while glycerol facilitators selectively transport glycerol but not water. Some aquaporins can transport NH3 and CO2. Glycerol facilitators function as solute nonspecific channels, and may transport glycerol, dihydroxyacetone, propanediol, urea and other small neutral molecules in physiologically importantprocesses. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273306 [Multi-domain] Cd Length: 216 Bit Score: 156.30 E-value: 1.16e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 78 AEFVGTFILIFMATAGPIVNQKYD-----HAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGaygavGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRRFPLKRVP 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKGVFHPFMSGGVTV-----PSVSTGQAFALEFFITFNLLFVVTAVATDTRAV--GELAGIAVG 225
Cdd:TIGR00861 81 VYIVAQLIGAILGAALLYGLTSGLFPGNLAVngsasAGVSSGQAFFVEFIGTAILVLVIFATTDDRNRVprGGFAPLAIG 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 224117684 226 ATVMLNILVAGPSTGGSMNPVRTLGPAIAAG--NYKKIWIYLVAPTLGAVVGAGAY 279
Cdd:TIGR00861 161 LLVFLIHLSMGPYTGTGMNPARSLGPALFAGlaGWGNHWVYWVGPIIGAILGALVY 216
|
|
| PRK05420 |
PRK05420 |
aquaporin Z; Provisional |
72-287 |
5.28e-29 |
|
aquaporin Z; Provisional
Pssm-ID: 235453 [Multi-domain] Cd Length: 231 Bit Score: 110.44 E-value: 5.28e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 72 LTRKLGAEFVGTFILIF-------MATAGPIVnqkydhAETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALR 144
Cdd:PRK05420 1 MFKKLAAEFFGTFWLVFggcgsavLAAAFPEL------GIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGG 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 145 HFPWVQVPAYIAAQVSASICASFAL------KGVFH----PFMSGGVTVPS---VSTGQAFALEFFITFNLLFVVTAvAT 211
Cdd:PRK05420 75 RFPAKELVPYIIAQVVGGIAAAAVLyliasgKAGFDlagsGFASNGYGEHSpggYSLLAALVCEVVLTAFFLLVILG-AT 153
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 212 DTRAVGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNY--KKIWIYLVAPTLGAVVGAGAYTLVKLRDD 287
Cdd:PRK05420 154 DKRAPAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGGWalEQLWLFWVAPIVGAIIGGLIYRLLLEKDD 231
|
|
| PTZ00016 |
PTZ00016 |
aquaglyceroporin; Provisional |
74-282 |
2.12e-26 |
|
aquaglyceroporin; Provisional
Pssm-ID: 240230 [Multi-domain] Cd Length: 294 Bit Score: 105.21 E-value: 2.12e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 74 RKLGAEFVGTFILIFMATAgpIVNQKYDHAETLIGNAACAG--LAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQV 151
Cdd:PTZ00016 51 REYVAEFLGTFVLLFFGEG--VVATTHTVGNNGDYLAITIGwgLGVTFGLLVSAGISGGHLNPAVTLGNAVFGKFPWKKL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 152 PAYIAAQVSASICASFALKGVFHPFMS----------------GGV--TVPSVSTGQAFALEFFITFNLLFVVTAV--AT 211
Cdd:PTZ00016 129 PGYFVAQLLGAFVGAACVYGLYYGFFKdhgipelpwetmangfAGVfaTYPREGNFYAIFSELILTAILLLVILAItdPN 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 212 DTRAVGELAgIAVGATVMLNILVAGPSTGGSMNPVRTLGP----AIAAG-------NYkKIWIYLVAPTLGAVVGAGAYT 280
Cdd:PTZ00016 209 NCPAFNYLP-VAVGLLVFVIGISFGGNTGYALNPARDLGPrlfsAILWGsevftkdNY-YFWVPLVAPFVGAVLGMFLYD 286
|
..
gi 224117684 281 LV 282
Cdd:PTZ00016 287 KF 288
|
|
| PLN00166 |
PLN00166 |
aquaporin TIP2; Provisional |
78-287 |
5.82e-26 |
|
aquaporin TIP2; Provisional
Pssm-ID: 165733 Cd Length: 250 Bit Score: 103.09 E-value: 5.82e-26
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 78 AEFVGTFILIFMATAGPIVNQKY--DHA---ETLIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:PLN00166 23 SEFIATLLFVFAGVGSAIAFAKLtsDAAldpAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITIITGF 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKgvfhpFMSGGVTVPS--VSTG----QAFALEFFITFNLLFVVTAVATDTR--AVGELAGIAV 224
Cdd:PLN00166 103 FYWIAQCLGSIVACLLLV-----FVTNGESVPThgVAAGlgaiEGVVMEIVVTFALVYTVYATAADPKkgSLGTIAPIAI 177
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 224117684 225 GATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGA--------GAYTLVKLRDD 287
Cdd:PLN00166 178 GFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFSQIWIYWVGPLVGGALAGliygdvfiGSYAAAPTSED 248
|
|
| PLN00027 |
PLN00027 |
aquaporin TIP; Provisional |
78-282 |
3.45e-20 |
|
aquaporin TIP; Provisional
Pssm-ID: 177664 Cd Length: 252 Bit Score: 87.53 E-value: 3.45e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 78 AEFVGTFILIFMAT-AGPIVNQKYDHAET----LIGNAACAGLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWVQVP 152
Cdd:PLN00027 25 AEFISTLIFVFAGEgSGMAFNKLTDNGSTtpagLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGI 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 153 AYIAAQVSASICASFALKgvfhpFMSGGVTVPS------VSTGQAFALEFFITFNLLFVVTAVATDTR--AVGELAGIAV 224
Cdd:PLN00027 105 LYWIAQLLGSVVACLLLK-----FSTGGLETSAfslssgVGVWNAFVFEIVMTFGLVYTVYATAVDPKkgDLGIIAPIAI 179
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 224117684 225 GATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAYTLV 282
Cdd:PLN00027 180 GFIVGANILAGGAFDGASMNPAVSFGPAVVSWTWTNHWVYWAGPLIGGGIAGLVYELI 237
|
|
| PLN00167 |
PLN00167 |
aquaporin TIP5; Provisional |
78-279 |
1.36e-15 |
|
aquaporin TIP5; Provisional
Pssm-ID: 215085 Cd Length: 256 Bit Score: 74.94 E-value: 1.36e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 78 AEFVGTFILIFMATAGPIVNQKydhaetLIGNAACAGLAVMIIILSTG-----------HISGAHLNPSLTIAFAALRHF 146
Cdd:PLN00167 27 AEFISTFFFVFAAVGSAMSSRK------LMPDAASDPSSLLIVAIANAfalssavyiaaNISGGHVNPAVTFGMAVGGHI 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 147 PWVQVPAYIAAQVSASICASFALKgvfhpFMSGGVTVPSVSTGQ------AFALEFFITFNLLFVVTAVATDTRA-VGEL 219
Cdd:PLN00167 101 SVPTAMFYWISQMLASVMACLFLK-----VTTVGQHVPTYKIAEemtgfgASVLEGVLTFGLVYTVYAAGDPRRGlLGAI 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 220 AGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAIAAGNYKKIWIYLVAPTLGAVVGAGAY 279
Cdd:PLN00167 176 GPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAGSFKNQAVYWVGPLLGGAVAGLLY 235
|
|
| MIP |
cd00333 |
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane ... |
51-167 |
5.85e-08 |
|
Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Pssm-ID: 238204 Cd Length: 228 Bit Score: 52.26 E-value: 5.85e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 224117684 51 TAPNWGQPHTCFLDIPSPDVSLTRKLGAEFVGTFILIFMATAgpiVNQKYDHAETLIGNAACAGLAVMIIILSTGHISGA 130
Cdd:cd00333 108 FLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFA---TTDDPNGPPPGGLAPLAIGLLVAAIGLAGGPITGA 184
|
90 100 110
....*....|....*....|....*....|....*....
gi 224117684 131 HLNP--SLTIAFAALRHFPWVQVPAYIAAQVSASICASF 167
Cdd:cd00333 185 SMNParSLGPALFTGLARHWHYFWVYWVGPLIGAIAGAL 223
|
|
| |
